pycom02g15620

Copper-transporting ATPase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
12507374 .. 12509825
2452 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g15620.1

Sequence Viewer

Length: 1050 bp
ATGATTGATTCTTTTTTTTCTTTCCTACATCAGGTTGTCATTGTTGCATTTTTGACATGGCTTGGATGGTTCATCCCTGGAGAATTTGGTCTTTTTCCGGAAAACTCAAAAGGCATGGATAAATTTGAGCTGGCATTACAATTCGGTATCTCAGTATTAGTGGTTGCTTGCCCTTGGAAAGGTGCTTCGCAAGGTGCTTTTATCAAGGGTGGAAATGCACTCGAAAAGGCTCATAAGCATGCTAAGAGGCTGCAAAAGCCGTTTGGATCAACCGAACATGTGATGGAGGCTGAGGATTTTGAGGTGCACACAGGAGCTGGCGGCGTTAAGACTCATGCGCATAATAATGTCCAGGTTGGTCCTGAGGTTGAGAAATATGTTTCGGAACACGAGAATCTGGCTCGAACATATGTGTTGGTTGCCATTGATGGAAAGATTGCCGGGTCTTTTGCTGTAACTGATCGAGTGAAGCCAGAGGCTGCGCAGGTTATCTCTTATCTTCACTCGATGAACATTACTAGCATCATGCTTACTGGTGATAACTGGGCTACAGCAGCAGCCATAGCGAAAGAGGTTGGCTTTGATAAGGTGTACGCTGAGACGGATCCACTGGGTAAAGCTGATAGAAATCAAAGAATTGCAGGTACGATTATGAAATATTACGAGGGTGGTGTGAATACATTACAATACCCAGCTACACACGCTGTTTTATTCTGGTATATGAAAGGAATGGCGGTGGCAATGATGGGGGATGGAATTAATGACTCTTCAGCTTTGGTTTCAGCAGATTTTGACATGGCAATTAGTGCTGGCACCGACGTAGCTATAGAAGCCGCTGATATAATTCTGATGAATAGCAACTTGGAAGATGTAGTTACAGCCATAGATCTCTCCAGAAAAACTATGTCACGAATTCGATTGAATTATGTCTGGGCCCGGGCTACAATATCCTTGGCATGCCAGTCGTACGTGGTATGTTCTTCTCTCTTGTTGCAGTCATATAAGAAGCCTTTGCATATTCAGAGCGTCTCCAACGGCAAGTTTGCGTGA

Protein Analysis

350

Amino Acids

38.07

Weight (kDa)

6.12

Isoelectric Point (pI)

29.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase PF00702 76 - 263 6e-15 haloacid dehalogenase-like hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 339, 483
Acc36I ACCTGC 2 cut(s) 475, 632
AccB1I GGYRCC 1 cut(s) 812
AccIII TCCGGA 1 cut(s) 97
AciI CCGC 3 cut(s) 321, 734, 834
AclWI GGATC 3 cut(s) 274, 599, 612
AcsI RAATTY 3 cut(s) 83, 122, 912
AcuI CTGAAG 1 cut(s) 753
AfaI GTAC 3 cut(s) 593, 646, 968
AfiI CCNNNNNNNGG 2 cut(s) 31, 179
AflIII ACRYGT 1 cut(s) 277
AgsI TTSAA 1 cut(s) 922
AjnI CCWGG 2 cut(s) 76, 351
AjuI GAANNNNNNNTTGG 2 cut(s) 845, 877
AluBI AGCT 6 cut(s) 130, 317, 620, 695, 773, 824
AluI AGCT 6 cut(s) 130, 317, 620, 695, 773, 824
Alw21I GWGCWC 1 cut(s) 309
Alw26I GTCTC 2 cut(s) 593, 1033
Alw44I GTGCAC 1 cut(s) 305
AlwI GGATC 3 cut(s) 274, 599, 612
AlwNI CAGNNNCTG 2 cut(s) 317, 479
Ama87I CYCGRG 1 cut(s) 936
Aor13HI TCCGGA 1 cut(s) 97
AoxI GGCC 1 cut(s) 933
ApaI GGGCCC 1 cut(s) 937
ApaLI GTGCAC 1 cut(s) 305
ApeKI GCWGC 4 cut(s) 250, 479, 554, 557
ApoI RAATTY 3 cut(s) 83, 122, 912
AseI ATTAAT 1 cut(s) 759
AspLEI GCGC 2 cut(s) 340, 484
AspS9I GGNCC 3 cut(s) 359, 933, 934
AsuC2I CCSGG 3 cut(s) 442, 937, 938
AsuHPI GGTGA 1 cut(s) 548
AvaI CYCGRG 1 cut(s) 936
AvaII GGWCC 1 cut(s) 359
AxyI CCTNAGG 1 cut(s) 363
BaeGI GKGCMC 2 cut(s) 309, 937
BamHI GGATCC 1 cut(s) 604
BanI GGYRCC 1 cut(s) 812
BanII GRGCYC 1 cut(s) 937
BauI CACGAG 1 cut(s) 389
Bbv12I GWGCWC 1 cut(s) 309
BbvCI CCTCAGC 1 cut(s) 291
BbvI GCAGC 4 cut(s) 237, 466, 566, 569
BccI CCATC 5 cut(s) 60, 277, 422, 739, 746
BceAI ACGGC 1 cut(s) 244
BcgI CGANNNNNNTGC 2 cut(s) 945, 979
BciT130I CCWGG 2 cut(s) 78, 353
BcnI CCSGG 3 cut(s) 442, 937, 938
BcoDI GTCTC 2 cut(s) 593, 1033
BfaI CTAG 1 cut(s) 519
BfmI CTRYAG 2 cut(s) 549, 825
BfuAI ACCTGC 2 cut(s) 475, 632
BglII AGATCT 1 cut(s) 886
BisI GCNGC 6 cut(s) 251, 322, 480, 555, 558, 834
BlsI GCNGC 6 cut(s) 252, 323, 481, 556, 559, 835
Bme1390I CCNGG 5 cut(s) 78, 353, 442, 937, 938
Bme18I GGWCC 1 cut(s) 359
BmeT110I CYCGRG 1 cut(s) 936
BmgT120I GGNCC 3 cut(s) 359, 933, 934
BmiI GGNNCC 3 cut(s) 606, 814, 935
BmrFI CCNGG 5 cut(s) 78, 353, 442, 937, 938
BmrI ACTGGG 2 cut(s) 553, 620
BmsI GCATC 1 cut(s) 531
BmuI ACTGGG 2 cut(s) 553, 620
BpmI CTGGAG 2 cut(s) 99, 877
Bpu10I CCTNAGC 1 cut(s) 291
BpuMI CCSGG 3 cut(s) 442, 937, 938
BsaAI YACGTR 1 cut(s) 970
BsaBI GATNNNNATC 1 cut(s) 627
BsaJI CCNNGG 4 cut(s) 76, 173, 936, 951
BsaWI WCCGGW 1 cut(s) 97
Bsc4I CCNNNNNNNGG 2 cut(s) 31, 179
Bse1I ACTGG 4 cut(s) 538, 548, 615, 961
Bse21I CCTNAGG 1 cut(s) 363
Bse3DI GCAATG 1 cut(s) 747
Bse8I GATNNNNATC 1 cut(s) 627
BseAI TCCGGA 1 cut(s) 97
BseBI CCWGG 2 cut(s) 78, 353
BseDI CCNNGG 4 cut(s) 76, 173, 936, 951
BseGI GGATG 3 cut(s) 71, 72, 757
BseJI GATNNNNATC 1 cut(s) 627
BseLI CCNNNNNNNGG 2 cut(s) 31, 179
BseMI GCAATG 1 cut(s) 747
BseMII CTCAG 4 cut(s) 165, 282, 354, 588
BseNI ACTGG 4 cut(s) 538, 548, 615, 961
BseSI GKGCMC 2 cut(s) 309, 937
BseXI GCAGC 4 cut(s) 237, 466, 566, 569
BseYI CCCAGC 1 cut(s) 691
BshFI GGCC 1 cut(s) 935
BshNI GGYRCC 1 cut(s) 812
BsiHKAI GWGCWC 1 cut(s) 309
BsiHKCI CYCGRG 1 cut(s) 936
BsiSI CCGG 3 cut(s) 98, 441, 937
BsiWI CGTACG 1 cut(s) 966
BslI CCNNNNNNNGG 2 cut(s) 31, 179
BsmAI GTCTC 2 cut(s) 593, 1033
BsmBI CGTCTC 2 cut(s) 593, 1033
BsnI GGCC 1 cut(s) 935
BsoBI CYCGRG 1 cut(s) 936
Bsp120I GGGCCC 1 cut(s) 933
Bsp1286I GDGCHC 2 cut(s) 309, 937
Bsp13I TCCGGA 1 cut(s) 97
Bsp143I GATC 4 cut(s) 266, 460, 604, 886
BspACI CCGC 3 cut(s) 321, 734, 834
BspANI GGCC 1 cut(s) 935
BspCNI CTCAG 4 cut(s) 164, 283, 355, 589
BspEI TCCGGA 1 cut(s) 97
BspLI GGNNCC 3 cut(s) 606, 814, 935
BspMI ACCTGC 2 cut(s) 475, 632
BspPI GGATC 3 cut(s) 274, 599, 612
BspT107I GGYRCC 1 cut(s) 812
BsrDI GCAATG 1 cut(s) 747
BsrI ACTGG 4 cut(s) 538, 548, 615, 961
BssECI CCNNGG 4 cut(s) 76, 173, 936, 951
BssMI GATC 4 cut(s) 266, 460, 604, 886
BssSI CACGAG 1 cut(s) 389
BssT1I CCWWGG 2 cut(s) 173, 951
Bst2BI CACGAG 1 cut(s) 389
Bst2UI CCWGG 2 cut(s) 78, 353
Bst6I CTCTTC 1 cut(s) 772
BstAPI GCANNNNNTGC 1 cut(s) 806
BstBAI YACGTR 1 cut(s) 970
BstC8I GCNNGC 6 cut(s) 132, 169, 240, 319, 811, 958
BstDEI CTNAG 5 cut(s) 151, 243, 291, 363, 597
BstENI CCTNNNNNAGG 2 cut(s) 29, 177
BstF5I GGATG 3 cut(s) 71, 72, 757
BstHHI GCGC 2 cut(s) 340, 484
BstKTI GATC 4 cut(s) 269, 463, 607, 889
BstMAI GTCTC 2 cut(s) 593, 1033
BstMBI GATC 4 cut(s) 266, 460, 604, 886
BstMWI GCNNNNNNNGC 6 cut(s) 256, 554, 563, 701, 806, 830
BstNI CCWGG 2 cut(s) 78, 353
BstNSI RCATGY 3 cut(s) 242, 281, 960
BstSCI CCNGG 5 cut(s) 76, 351, 440, 935, 936
BstSFI CTRYAG 2 cut(s) 549, 825
BstSLI GKGCMC 2 cut(s) 309, 937
BstV1I GCAGC 4 cut(s) 237, 466, 566, 569
BstX2I RGATCY 2 cut(s) 604, 886
BstYI RGATCY 2 cut(s) 604, 886
Bsu36I CCTNAGG 1 cut(s) 363
BsuRI GGCC 1 cut(s) 935
BtsCI GGATG 3 cut(s) 71, 72, 757
BtsIMutI CAGTG 1 cut(s) 608
BveI ACCTGC 2 cut(s) 475, 632
Cac8I GCNNGC 6 cut(s) 132, 169, 240, 319, 811, 958
CaiI CAGNNNCTG 2 cut(s) 317, 479
CfoI GCGC 2 cut(s) 340, 484
Cfr13I GGNCC 3 cut(s) 359, 933, 934
Cfr9I CCCGGG 1 cut(s) 936
CseI GACGC 1 cut(s) 1015
Csp6I GTAC 3 cut(s) 592, 645, 967
CviAII CATG 8 cut(s) 57, 115, 239, 278, 335, 526, 796, 957
CviQI GTAC 3 cut(s) 592, 645, 967
DdeI CTNAG 5 cut(s) 151, 243, 291, 363, 597
DpnI GATC 4 cut(s) 268, 462, 606, 888
DpnII GATC 4 cut(s) 266, 460, 604, 886
Eam1104I CTCTTC 1 cut(s) 772
EarI CTCTTC 1 cut(s) 772
Eco130I CCWWGG 2 cut(s) 173, 951
Eco24I GRGCYC 1 cut(s) 937
Eco47I GGWCC 1 cut(s) 359
Eco57I CTGAAG 1 cut(s) 753
Eco81I CCTNAGG 1 cut(s) 363
Eco88I CYCGRG 1 cut(s) 936
EcoNI CCTNNNNNAGG 2 cut(s) 29, 177
EcoRI GAATTC 1 cut(s) 912
EcoRII CCWGG 2 cut(s) 76, 351
EcoT14I CCWWGG 2 cut(s) 173, 951
EcoT38I GRGCYC 1 cut(s) 937
ErhI CCWWGG 2 cut(s) 173, 951
Esp3I CGTCTC 2 cut(s) 593, 1033
FaeI CATG 8 cut(s) 60, 118, 242, 281, 338, 529, 799, 960
FatI CATG 8 cut(s) 56, 114, 238, 277, 334, 525, 795, 956
FauNDI CATATG 1 cut(s) 409
Fnu4HI GCNGC 6 cut(s) 251, 322, 480, 555, 558, 834
FokI GGATG 3 cut(s) 59, 78, 764
FriOI GRGCYC 1 cut(s) 937
Fsp4HI GCNGC 6 cut(s) 251, 322, 480, 555, 558, 834
FspAI RTGCGCAY 1 cut(s) 339
FspBI CTAG 1 cut(s) 519
FspI TGCGCA 2 cut(s) 339, 483
GlaI GCGC 2 cut(s) 339, 483
GluI GCNGC 6 cut(s) 251, 322, 480, 555, 558, 834
GsaI CCCAGC 1 cut(s) 695
GsuI CTGGAG 2 cut(s) 99, 877
HaeIII GGCC 1 cut(s) 935
HapII CCGG 3 cut(s) 98, 441, 937
HgaI GACGC 1 cut(s) 1015
HhaI GCGC 2 cut(s) 340, 484
Hin1II CATG 8 cut(s) 60, 118, 242, 281, 338, 529, 799, 960
Hin6I GCGC 2 cut(s) 338, 482
HinP1I GCGC 2 cut(s) 338, 482
HinfI GANTC 4 cut(s) 8, 331, 394, 764
HpaII CCGG 3 cut(s) 98, 441, 937
HphI GGTGA 1 cut(s) 548
Hpy166II GTNNAC 2 cut(s) 307, 592
Hpy188I TCNGA 3 cut(s) 385, 849, 1023
Hpy188III TCNNGA 4 cut(s) 98, 362, 894, 909
Hpy8I GTNNAC 2 cut(s) 307, 592
Hpy99I CGWCG 1 cut(s) 821
HpyCH4IV ACGT 2 cut(s) 819, 969
HpyCH4V TGCA 7 cut(s) 47, 218, 253, 307, 641, 994, 1015
HpyF10VI GCNNNNNNNGC 6 cut(s) 256, 554, 563, 701, 806, 830
HpyF3I CTNAG 5 cut(s) 151, 243, 291, 363, 597
HpySE526I ACGT 2 cut(s) 819, 969
Hsp92II CATG 8 cut(s) 60, 118, 242, 281, 338, 529, 799, 960
HspAI GCGC 2 cut(s) 338, 482
Kpn2I TCCGGA 1 cut(s) 97
Kzo9I GATC 4 cut(s) 266, 460, 604, 886
LmnI GCTCC 1 cut(s) 314
Lsp1109I GCAGC 4 cut(s) 237, 466, 566, 569
LweI GCATC 1 cut(s) 531
MaeI CTAG 1 cut(s) 519
MaeII ACGT 2 cut(s) 819, 969
MaeIII GTNAC 3 cut(s) 454, 874, 906
MalI GATC 4 cut(s) 268, 462, 606, 888
MboI GATC 4 cut(s) 266, 460, 604, 886
MboII GAAGA 4 cut(s) 491, 759, 878, 972
MflI RGATCY 2 cut(s) 604, 886
MhlI GDGCHC 2 cut(s) 309, 937
MluCI AATT 9 cut(s) 83, 122, 140, 636, 756, 801, 843, 912, 922
MlyI GAGTC 2 cut(s) 325, 758
MnlI CCTC 8 cut(s) 240, 280, 286, 295, 358, 469, 565, 658
MroI TCCGGA 1 cut(s) 97
MseI TTAA 2 cut(s) 327, 759
MslI CAYNNNNRTG 2 cut(s) 237, 345
MspA1I CMGCKG 1 cut(s) 836
MspI CCGG 3 cut(s) 98, 441, 937
MspR9I CCNGG 5 cut(s) 78, 353, 442, 937, 938
MvaI CCWGG 2 cut(s) 78, 353
MwoI GCNNNNNNNGC 6 cut(s) 256, 554, 563, 701, 806, 830
NciI CCSGG 3 cut(s) 442, 937, 938
NdeI CATATG 1 cut(s) 409
NdeII GATC 4 cut(s) 266, 460, 604, 886
NlaIII CATG 8 cut(s) 60, 118, 242, 281, 338, 529, 799, 960
NlaIV GGNNCC 3 cut(s) 606, 814, 935
NmuCI GTSAC 1 cut(s) 906
NsbI TGCGCA 2 cut(s) 339, 483
NspI RCATGY 3 cut(s) 242, 281, 960
PaeI GCATGC 2 cut(s) 242, 960
PciI ACATGT 1 cut(s) 277
PfeI GAWTC 2 cut(s) 8, 394
Pfl23II CGTACG 1 cut(s) 966
PkrI GCNGC 6 cut(s) 252, 323, 481, 556, 559, 835
PleI GAGTC 2 cut(s) 325, 758
PpsI GAGTC 2 cut(s) 325, 758
Ppu21I YACGTR 1 cut(s) 970
PscI ACATGT 1 cut(s) 277
PshBI ATTAAT 1 cut(s) 759
Psp6I CCWGG 2 cut(s) 76, 351
PspFI CCCAGC 1 cut(s) 691
PspGI CCWGG 2 cut(s) 76, 351
PspLI CGTACG 1 cut(s) 966
PspN4I GGNNCC 3 cut(s) 606, 814, 935
PspOMI GGGCCC 1 cut(s) 933
PspPI GGNCC 3 cut(s) 359, 933, 934
PstNI CAGNNNCTG 2 cut(s) 317, 479
PsuI RGATCY 2 cut(s) 604, 886
RsaI GTAC 3 cut(s) 593, 646, 968
RsaNI GTAC 3 cut(s) 592, 645, 967
RseI CAYNNNNRTG 2 cut(s) 237, 345
SaqAI TTAA 2 cut(s) 327, 759
SatI GCNGC 6 cut(s) 251, 322, 480, 555, 558, 834
Sau3AI GATC 4 cut(s) 266, 460, 604, 886
Sau96I GGNCC 3 cut(s) 359, 933, 934
SchI GAGTC 2 cut(s) 325, 758
ScrFI CCNGG 5 cut(s) 78, 353, 442, 937, 938
SduI GDGCHC 2 cut(s) 309, 937
SfaNI GCATC 1 cut(s) 531
SfcI CTRYAG 2 cut(s) 549, 825
SinI GGWCC 1 cut(s) 359
SmaI CCCGGG 1 cut(s) 938
SmiMI CAYNNNNRTG 2 cut(s) 237, 345
SphI GCATGC 2 cut(s) 242, 960
SrfI GCCCGGGC 1 cut(s) 938
Sse9I AATT 9 cut(s) 83, 122, 140, 636, 756, 801, 843, 912, 922
SsiI CCGC 3 cut(s) 321, 734, 834
SspI AATATT 1 cut(s) 659
SspMI CTAG 1 cut(s) 519
StyD4I CCNGG 5 cut(s) 76, 351, 440, 935, 936
StyI CCWWGG 2 cut(s) 173, 951
TaiI ACGT 2 cut(s) 822, 972
TaqI TCGA 5 cut(s) 222, 403, 463, 506, 916
TasI AATT 9 cut(s) 83, 122, 140, 636, 756, 801, 843, 912, 922
TauI GCSGC 2 cut(s) 324, 836
TfiI GAWTC 2 cut(s) 8, 394
Tru1I TTAA 2 cut(s) 327, 759
Tru9I TTAA 2 cut(s) 327, 759
TscAI CASTG 1 cut(s) 615
TseFI GTSAC 1 cut(s) 906
TseI GCWGC 4 cut(s) 250, 479, 554, 557
Tsp45I GTSAC 1 cut(s) 906
TspDTI ATGAA 5 cut(s) 61, 524, 668, 737, 866
TspGWI ACGGA 1 cut(s) 617
TspMI CCCGGG 1 cut(s) 936
TspRI CASTG 1 cut(s) 615
VneI GTGCAC 1 cut(s) 305
VpaK11BI GGWCC 1 cut(s) 359
VspI ATTAAT 1 cut(s) 759
XagI CCTNNNNNAGG 2 cut(s) 29, 177
XapI RAATTY 3 cut(s) 83, 122, 912
XceI RCATGY 3 cut(s) 242, 281, 960
XmaI CCCGGG 1 cut(s) 936
XspI CTAG 1 cut(s) 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.