Rh7BG172600

Copper-transporting ATPase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
13481356 .. 13526252
44897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG172600.1

Sequence Viewer

Length: 1146 bp
ATGGTTATTGCGTGCCCTTGTGCTCTAGGCCTAGCAACTCCTACTGCTGTCATGGTTGGTACTGGAGTCGGTGCATCCCAAGGTGTACTGATCAAAGGAGGTCAAGCATTAGAAAGTGCACATAACGTGGACTGCATTGTGTTCGACAAGACAGGGACTCTTACAATTGGGAAGCCACTGGTTGTTAACACACGACTCCTGAAAAATATGGTGCTTCGAGAATTCTATAAACTTGTTGCTGCAGCTGAGGTTAACAGTGAACACCCCTTGGCCAAGGCCATTGTTGAGTATGCCAAAAAATTCAGAGAAGATGAAGAGAATCCAGCCGGGCCAGAAGCGTATGACTTTGCCTCCATTACTGGTCACGGGGTGAAGGCTATTGTTCGGGGCAGGGAAATAATTGTGGGGAACAAGAGCTTGATGGTGGACCAGAACAATGCAGTTCCACTCGATGCAGAAGACTACCTAGCAGAAGCTGAAGGGCTGGCTCAAACTGGGATTCTAGTAGCCATAGATGGAGAAGTGGCCGGAGTTCTAGCAATATCTGATCCACTGAAACCAGGTGCTCAAGAAGTAATTACCATACTCAAGTCAATGAGTGTTAGAAGCATAATGGTGACATGTGACAATTGGGGAACTGCAAATTCTATTGCCAATGAAGTTGGTATTGATACTGTTATAGCCGAAGCGAAACCTGACCAGAAAGCAGAGAAAGTGAAGGAATTGCAGGCTTCAGGCTACACTGTGGCGATGGTGGGAGATGGCATCAATGACTCACCAGCACTTGTGGCGGCAGATGTAGGAATGGCAATTGGTGCTGGCACTGACATTGCAATTGAGGCAGCAGACATTGTGCTAATGAAGAGCAACTTGGAGGATGTGATAACTGCCATTGATCTTTCAAGGAAAACCTTCACCCGTATTCGTTTGAACTACATTTGGGCTTTGGGATATAATGTGCTCGGGATCCCAATAGCTGCAGGAGTTCTCTTCCCATCCACTGGATTTCGCTTACCCCCATGGATTGCTGGAGCTGCAATGGCTGCTTCTTCTGTCAGTGTTGTTTGTTGTTCATTGTTGTTGAAGAACTATAAGAGACCCAAGGAGCTGAATAGCCTTGAGGTGCGTGGAATAGTGATCGAGTGA

Protein Analysis

381

Amino Acids

40.03

Weight (kDa)

5.02

Isoelectric Point (pI)

21.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase PF00702 43 - 266 4.6e-33 haloacid dehalogenase-like hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1001
AciI CCGC 1 cut(s) 791
AclWI GGATC 3 cut(s) 542, 961, 974
AcoI YGGCCR 2 cut(s) 270, 525
AcsI RAATTY 3 cut(s) 221, 299, 643
AcuI CTGAAG 2 cut(s) 498, 717
AdeI CACNNNGTG 1 cut(s) 370
AfaI GTAC 2 cut(s) 61, 87
AfiI CCNNNNNNNGG 1 cut(s) 1001
AflIII ACRYGT 1 cut(s) 620
AgsI TTSAA 3 cut(s) 903, 931, 1084
AjnI CCWGG 1 cut(s) 559
AjuI GAANNNNNNNTTGG 2 cut(s) 854, 886
AluBI AGCT 6 cut(s) 245, 417, 476, 977, 1034, 1108
AluI AGCT 6 cut(s) 245, 417, 476, 977, 1034, 1108
Alw21I GWGCWC 4 cut(s) 25, 121, 568, 963
Alw26I GTCTC 1 cut(s) 1090
Alw44I GTGCAC 1 cut(s) 117
AlwI GGATC 3 cut(s) 542, 961, 974
AlwNI CAGNNNCTG 1 cut(s) 476
Ama87I CYCGRG 1 cut(s) 962
AoxI GGCC 5 cut(s) 28, 270, 276, 329, 525
ApaLI GTGCAC 1 cut(s) 117
ApeKI GCWGC 6 cut(s) 239, 242, 842, 977, 1034, 1043
ApoI RAATTY 3 cut(s) 221, 299, 643
Asp700I GAANNNNTTC 1 cut(s) 911
AspS9I GGNCC 2 cut(s) 329, 427
AsuC2I CCSGG 1 cut(s) 328
AsuHPI GGTGA 4 cut(s) 382, 628, 768, 907
AvaI CYCGRG 1 cut(s) 962
AvaII GGWCC 1 cut(s) 427
BaeGI GKGCMC 2 cut(s) 17, 121
BaeI ACNNNNGTAYC 2 cut(s) 51, 84
BalI TGGCCA 1 cut(s) 272
BamHI GGATCC 1 cut(s) 966
BbsI GAAGAC 1 cut(s) 465
Bbv12I GWGCWC 4 cut(s) 25, 121, 568, 963
BbvCI CCTCAGC 1 cut(s) 246
BbvI GCAGC 6 cut(s) 226, 254, 854, 964, 1021, 1030
BccI CCATC 5 cut(s) 415, 509, 745, 755, 1003
BcgI CGANNNNNNTGC 2 cut(s) 124, 158
BciT130I CCWGG 1 cut(s) 561
BclI TGATCA 1 cut(s) 90
BcnI CCSGG 1 cut(s) 328
BcoDI GTCTC 1 cut(s) 1090
BfaI CTAG 5 cut(s) 26, 32, 467, 503, 536
BfmI CTRYAG 2 cut(s) 240, 978
BisI GCNGC 7 cut(s) 240, 243, 792, 843, 978, 1035, 1044
BlsI GCNGC 7 cut(s) 241, 244, 793, 844, 979, 1036, 1045
Bme1390I CCNGG 2 cut(s) 328, 561
Bme18I GGWCC 1 cut(s) 427
BmeT110I CYCGRG 1 cut(s) 962
BmgT120I GGNCC 2 cut(s) 329, 427
BmiI GGNNCC 1 cut(s) 968
BmrFI CCNGG 2 cut(s) 328, 561
BmrI ACTGGG 1 cut(s) 504
BmsI GCATC 3 cut(s) 83, 442, 774
BmuI ACTGGG 1 cut(s) 504
BpiI GAAGAC 1 cut(s) 465
BpmI CTGGAG 2 cut(s) 84, 1050
Bpu10I CCTNAGC 1 cut(s) 246
BpuEI CTTGAG 3 cut(s) 552, 572, 1139
BpuMI CCSGG 1 cut(s) 328
BsaI GGTCTC 1 cut(s) 1090
BsaJI CCNNGG 5 cut(s) 79, 267, 273, 1019, 1101
BsaXI ACNNNNNCTCC 2 cut(s) 335, 365
Bsc4I CCNNNNNNNGG 1 cut(s) 1001
Bse1I ACTGG 5 cut(s) 67, 183, 364, 499, 1006
Bse3DI GCAATG 2 cut(s) 828, 1044
BseBI CCWGG 1 cut(s) 561
BseDI CCNNGG 5 cut(s) 79, 267, 273, 1019, 1101
BseGI GGATG 3 cut(s) 74, 883, 995
BseLI CCNNNNNNNGG 1 cut(s) 1001
BseMI GCAATG 2 cut(s) 828, 1044
BseMII CTCAG 1 cut(s) 237
BseNI ACTGG 5 cut(s) 67, 183, 364, 499, 1006
BseSI GKGCMC 2 cut(s) 17, 121
BseXI GCAGC 6 cut(s) 226, 254, 854, 964, 1021, 1030
BshFI GGCC 5 cut(s) 30, 272, 278, 331, 527
BsiHKAI GWGCWC 4 cut(s) 25, 121, 568, 963
BsiHKCI CYCGRG 1 cut(s) 962
BsiSI CCGG 2 cut(s) 327, 528
BslFI GGGAC 1 cut(s) 169
BslI CCNNNNNNNGG 1 cut(s) 1001
BsmAI GTCTC 1 cut(s) 1090
BsmFI GGGAC 1 cut(s) 169
BsnI GGCC 5 cut(s) 30, 272, 278, 331, 527
Bso31I GGTCTC 1 cut(s) 1090
BsoBI CYCGRG 1 cut(s) 962
Bsp1286I GDGCHC 5 cut(s) 17, 25, 121, 568, 963
Bsp143I GATC 5 cut(s) 90, 547, 895, 966, 1137
Bsp19I CCATGG 1 cut(s) 1019
BspACI CCGC 1 cut(s) 791
BspANI GGCC 5 cut(s) 30, 272, 278, 331, 527
BspCNI CTCAG 1 cut(s) 238
BspLI GGNNCC 1 cut(s) 968
BspMAI CTGCAG 2 cut(s) 244, 982
BspPI GGATC 3 cut(s) 542, 961, 974
BspQI GCTCTTC 1 cut(s) 857
BspTNI GGTCTC 1 cut(s) 1090
BsrDI GCAATG 2 cut(s) 828, 1044
BsrI ACTGG 5 cut(s) 67, 183, 364, 499, 1006
BssECI CCNNGG 5 cut(s) 79, 267, 273, 1019, 1101
BssMI GATC 5 cut(s) 90, 547, 895, 966, 1137
BssT1I CCWWGG 5 cut(s) 79, 267, 273, 1019, 1101
Bst2UI CCWGG 1 cut(s) 561
Bst4CI ACNGT 3 cut(s) 257, 676, 745
Bst6I CTCTTC 3 cut(s) 309, 857, 995
BstAPI GCANNNNNTGC 2 cut(s) 815, 1043
BstC8I GCNNGC 4 cut(s) 13, 486, 729, 820
BstDEI CTNAG 1 cut(s) 246
BstDSI CCRYGG 1 cut(s) 1019
BstF5I GGATG 3 cut(s) 74, 883, 995
BstKTI GATC 5 cut(s) 93, 550, 898, 969, 1140
BstMAI GTCTC 1 cut(s) 1090
BstMBI GATC 5 cut(s) 90, 547, 895, 966, 1137
BstMWI GCNNNNNNNGC 6 cut(s) 788, 815, 839, 1034, 1040, 1043
BstNI CCWGG 1 cut(s) 561
BstNSI RCATGY 1 cut(s) 624
BstSCI CCNGG 2 cut(s) 326, 559
BstSFI CTRYAG 2 cut(s) 240, 978
BstSLI GKGCMC 2 cut(s) 17, 121
BstV1I GCAGC 6 cut(s) 226, 254, 854, 964, 1021, 1030
BstV2I GAAGAC 1 cut(s) 465
BstX2I RGATCY 1 cut(s) 966
BstYI RGATCY 1 cut(s) 966
BsuRI GGCC 5 cut(s) 30, 272, 278, 331, 527
BtgI CCRYGG 1 cut(s) 1019
BtgZI GCGATG 1 cut(s) 764
BtsCI GGATG 3 cut(s) 74, 883, 995
BtsIMutI CAGTG 7 cut(s) 176, 262, 551, 741, 822, 999, 1063
Cac8I GCNNGC 4 cut(s) 13, 486, 729, 820
CaiI CAGNNNCTG 1 cut(s) 476
Cfr13I GGNCC 2 cut(s) 329, 427
CsiI ACCWGGT 1 cut(s) 559
Csp6I GTAC 2 cut(s) 60, 86
CviAII CATG 3 cut(s) 52, 621, 1020
CviQI GTAC 2 cut(s) 60, 86
DdeI CTNAG 1 cut(s) 246
DpnI GATC 5 cut(s) 92, 549, 897, 968, 1139
DpnII GATC 5 cut(s) 90, 547, 895, 966, 1137
DraIII CACNNNGTG 1 cut(s) 370
EaeI YGGCCR 2 cut(s) 270, 525
Eam1104I CTCTTC 3 cut(s) 309, 857, 995
EarI CTCTTC 3 cut(s) 309, 857, 995
Eco130I CCWWGG 5 cut(s) 79, 267, 273, 1019, 1101
Eco147I AGGCCT 1 cut(s) 30
Eco31I GGTCTC 1 cut(s) 1090
Eco47I GGWCC 1 cut(s) 427
Eco57I CTGAAG 2 cut(s) 498, 717
Eco88I CYCGRG 1 cut(s) 962
EcoRI GAATTC 1 cut(s) 221
EcoRII CCWGG 1 cut(s) 559
EcoT14I CCWWGG 5 cut(s) 79, 267, 273, 1019, 1101
ErhI CCWWGG 5 cut(s) 79, 267, 273, 1019, 1101
FaeI CATG 3 cut(s) 55, 624, 1023
FalI AAGNNNNNCTT 2 cut(s) 854, 886
FaqI GGGAC 1 cut(s) 169
FatI CATG 3 cut(s) 51, 620, 1019
FbaI TGATCA 1 cut(s) 90
Fnu4HI GCNGC 7 cut(s) 240, 243, 792, 843, 978, 1035, 1044
FokI GGATG 3 cut(s) 61, 890, 982
Fsp4HI GCNGC 7 cut(s) 240, 243, 792, 843, 978, 1035, 1044
FspBI CTAG 5 cut(s) 26, 32, 467, 503, 536
GluI GCNGC 7 cut(s) 240, 243, 792, 843, 978, 1035, 1044
GsuI CTGGAG 2 cut(s) 84, 1050
HaeIII GGCC 5 cut(s) 30, 272, 278, 331, 527
HapII CCGG 2 cut(s) 327, 528
Hin1II CATG 3 cut(s) 55, 624, 1023
HincII GTYRAC 2 cut(s) 187, 253
HindII GTYRAC 2 cut(s) 187, 253
HinfI GANTC 6 cut(s) 66, 157, 195, 319, 499, 773
HpaI GTTAAC 2 cut(s) 187, 253
HpaII CCGG 2 cut(s) 327, 528
HphI GGTGA 4 cut(s) 382, 628, 768, 907
Hpy166II GTNNAC 7 cut(s) 86, 119, 130, 187, 253, 260, 427
Hpy188I TCNGA 2 cut(s) 305, 547
Hpy188III TCNNGA 4 cut(s) 199, 218, 569, 964
Hpy8I GTNNAC 7 cut(s) 86, 119, 130, 187, 253, 260, 427
HpyAV CCTTC 4 cut(s) 367, 473, 712, 922
HpyCH4III ACNGT 3 cut(s) 257, 676, 745
HpyCH4IV ACGT 1 cut(s) 126
HpyF10VI GCNNNNNNNGC 6 cut(s) 788, 815, 839, 1034, 1040, 1043
HpyF3I CTNAG 1 cut(s) 246
HpySE526I ACGT 1 cut(s) 126
Hsp92II CATG 3 cut(s) 55, 624, 1023
Ksp22I TGATCA 1 cut(s) 90
KspAI GTTAAC 2 cut(s) 187, 253
Kzo9I GATC 5 cut(s) 90, 547, 895, 966, 1137
LguI GCTCTTC 1 cut(s) 857
LmnI GCTCC 2 cut(s) 1031, 1105
Lsp1109I GCAGC 6 cut(s) 226, 254, 854, 964, 1021, 1030
LweI GCATC 3 cut(s) 83, 442, 774
MabI ACCWGGT 1 cut(s) 559
MaeI CTAG 5 cut(s) 26, 32, 467, 503, 536
MaeII ACGT 1 cut(s) 126
MaeIII GTNAC 3 cut(s) 362, 616, 623
MalI GATC 5 cut(s) 92, 549, 897, 968, 1139
MboI GATC 5 cut(s) 90, 547, 895, 966, 1137
MboII GAAGA 7 cut(s) 320, 326, 470, 874, 982, 1041, 1096
MfeI CAATTG 4 cut(s) 165, 628, 810, 834
MflI RGATCY 1 cut(s) 966
MhlI GDGCHC 5 cut(s) 17, 25, 121, 568, 963
MlsI TGGCCA 1 cut(s) 272
MluNI TGGCCA 1 cut(s) 272
MlyI GAGTC 4 cut(s) 75, 151, 189, 767
MnlI CCTC 6 cut(s) 92, 241, 361, 832, 868, 1114
Mox20I TGGCCA 1 cut(s) 272
MroXI GAANNNNTTC 1 cut(s) 911
MscI TGGCCA 1 cut(s) 272
MseI TTAA 2 cut(s) 186, 252
MslI CAYNNNNRTG 1 cut(s) 614
Msp20I TGGCCA 1 cut(s) 272
MspA1I CMGCKG 1 cut(s) 245
MspI CCGG 2 cut(s) 327, 528
MspR9I CCNGG 2 cut(s) 328, 561
MunI CAATTG 4 cut(s) 165, 628, 810, 834
MvaI CCWGG 1 cut(s) 561
MwoI GCNNNNNNNGC 6 cut(s) 788, 815, 839, 1034, 1040, 1043
NciI CCSGG 1 cut(s) 328
NcoI CCATGG 1 cut(s) 1019
NdeII GATC 5 cut(s) 90, 547, 895, 966, 1137
NlaIII CATG 3 cut(s) 55, 624, 1023
NlaIV GGNNCC 1 cut(s) 968
NmuCI GTSAC 3 cut(s) 362, 616, 623
NspI RCATGY 1 cut(s) 624
PceI AGGCCT 1 cut(s) 30
PciI ACATGT 1 cut(s) 620
PciSI GCTCTTC 1 cut(s) 857
PdmI GAANNNNTTC 1 cut(s) 911
PfeI GAWTC 2 cut(s) 319, 499
PflMI CCANNNNNTGG 1 cut(s) 1001
PkrI GCNGC 7 cut(s) 241, 244, 793, 844, 979, 1036, 1045
PleI GAGTC 4 cut(s) 74, 151, 189, 767
PpsI GAGTC 4 cut(s) 74, 151, 189, 767
PscI ACATGT 1 cut(s) 620
Psp6I CCWGG 1 cut(s) 559
PspGI CCWGG 1 cut(s) 559
PspN4I GGNNCC 1 cut(s) 968
PspPI GGNCC 2 cut(s) 329, 427
PstI CTGCAG 2 cut(s) 244, 982
PstNI CAGNNNCTG 1 cut(s) 476
PsuI RGATCY 1 cut(s) 966
PvuII CAGCTG 1 cut(s) 245
RsaI GTAC 2 cut(s) 61, 87
RsaNI GTAC 2 cut(s) 60, 86
RseI CAYNNNNRTG 1 cut(s) 614
SapI GCTCTTC 1 cut(s) 857
SaqAI TTAA 2 cut(s) 186, 252
SatI GCNGC 7 cut(s) 240, 243, 792, 843, 978, 1035, 1044
Sau3AI GATC 5 cut(s) 90, 547, 895, 966, 1137
Sau96I GGNCC 2 cut(s) 329, 427
SchI GAGTC 4 cut(s) 75, 151, 189, 767
ScrFI CCNGG 2 cut(s) 328, 561
SduI GDGCHC 5 cut(s) 17, 25, 121, 568, 963
SexAI ACCWGGT 1 cut(s) 559
SfaNI GCATC 3 cut(s) 83, 442, 774
SfcI CTRYAG 2 cut(s) 240, 978
SinI GGWCC 1 cut(s) 427
SmiMI CAYNNNNRTG 1 cut(s) 614
SmlI CTYRAG 3 cut(s) 567, 587, 1118
SmoI CTYRAG 3 cut(s) 567, 587, 1118
SseBI AGGCCT 1 cut(s) 30
SsiI CCGC 1 cut(s) 791
SspMI CTAG 5 cut(s) 26, 32, 467, 503, 536
StuI AGGCCT 1 cut(s) 30
StyD4I CCNGG 2 cut(s) 326, 559
StyI CCWWGG 5 cut(s) 79, 267, 273, 1019, 1101
TaaI ACNGT 3 cut(s) 257, 676, 745
TaiI ACGT 1 cut(s) 129
TaqI TCGA 4 cut(s) 144, 217, 450, 1140
TatI WGTACW 1 cut(s) 85
TauI GCSGC 1 cut(s) 794
TfiI GAWTC 2 cut(s) 319, 499
Tru1I TTAA 2 cut(s) 186, 252
Tru9I TTAA 2 cut(s) 186, 252
TscAI CASTG 7 cut(s) 183, 262, 558, 748, 829, 1006, 1063
TseFI GTSAC 3 cut(s) 362, 616, 623
TseI GCWGC 6 cut(s) 239, 242, 842, 977, 1034, 1043
Tsp45I GTSAC 3 cut(s) 362, 616, 623
TspDTI ATGAA 4 cut(s) 327, 672, 875, 1062
TspRI CASTG 7 cut(s) 183, 262, 558, 748, 829, 1006, 1063
Van91I CCANNNNNTGG 1 cut(s) 1001
VneI GTGCAC 1 cut(s) 117
VpaK11BI GGWCC 1 cut(s) 427
XapI RAATTY 3 cut(s) 221, 299, 643
XceI RCATGY 1 cut(s) 624
XmnI GAANNNNTTC 1 cut(s) 911
XspI CTAG 5 cut(s) 26, 32, 467, 503, 536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.