Copper-transporting ATPase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1192500.v1.1 MD03G1138700.v1.1 MD03G1180400.v1.1 MD03G1181400.v1.1 MD03G1182600.v1.1 |
| pyrus_communis | pycom02g15570 pycom02g15620 |
| rosa_chinensis | RchiOBHm_Chr2g0138301 RchiOBHm_Chr7g0198201 |
| rosa_laevigata | RLG00000003887 RLG00000035827 |
| rosa_multiflora | Rmu_sc0000221.1_g000001 Rmu_sc0002263.1_g000023 Rmu_sc0003465.1_g000045 |
| rosa_roxburghii | Rroxscaffold_2G00106950 Rroxscaffold_2G00141500 Rroxscaffold_3G00232230 Rroxscaffold_5G00354760 Rroxscaffold_5G00354830 |
| rosa_rugosa | Rorug01G0072400 Rorug01G0080400 Rorug02G0391900 Rorug03G0335000 Rorug05G0277500 Rorug06G0193000 |
| rosa_samantha | Rh1AG099400 Rh1DG291600 Rh3BG287400 Rh3BG289600 Rh4BG446000 Rh4CG463300 Rh4DG336400 Rh5BG050800 Rh5BG085000 Rh5CG336100 Rh5CG336700 Rh5DG044200 Rh6BG050400 Rh7AG169000 Rh7AG169400 Rh7BG078400 Rh7BG172600 Rh7BG434400 Rh7BG434500 Rh7CG179100 Rh7CG468500 Rh7CG479100 Rh7DG171900 Rh7DG271300 |
| rosa_wichuraiana | Rw1G013030 Rw3G006160 Rw4G015230 Rw5G030130 Rw6G044730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 183 |
| AclI | AACGTT | 1 cut(s) | 244 |
| AcoI | YGGCCR | 1 cut(s) | 125 |
| AgsI | TTSAA | 1 cut(s) | 25 |
| AjnI | CCWGG | 2 cut(s) | 101, 127 |
| AluBI | AGCT | 1 cut(s) | 206 |
| AluI | AGCT | 1 cut(s) | 206 |
| AoxI | GGCC | 1 cut(s) | 125 |
| BccI | CCATC | 1 cut(s) | 50 |
| BciT130I | CCWGG | 2 cut(s) | 103, 129 |
| BfaI | CTAG | 2 cut(s) | 44, 152 |
| BfuAI | ACCTGC | 1 cut(s) | 183 |
| BlpI | GCTNAGC | 1 cut(s) | 207 |
| Bme1390I | CCNGG | 2 cut(s) | 103, 129 |
| BmiI | GGNNCC | 2 cut(s) | 69, 178 |
| BmrFI | CCNGG | 2 cut(s) | 103, 129 |
| Bpu10I | CCTNAGC | 1 cut(s) | 237 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 207 |
| BsaAI | YACGTR | 1 cut(s) | 227 |
| BsaJI | CCNNGG | 1 cut(s) | 102 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 216, 246 |
| BseBI | CCWGG | 2 cut(s) | 103, 129 |
| BseDI | CCNNGG | 1 cut(s) | 102 |
| BseMII | CTCAG | 2 cut(s) | 198, 228 |
| BshFI | GGCC | 1 cut(s) | 127 |
| BsnI | GGCC | 1 cut(s) | 127 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 207 |
| BspANI | GGCC | 1 cut(s) | 127 |
| BspCNI | CTCAG | 2 cut(s) | 199, 229 |
| BspLI | GGNNCC | 2 cut(s) | 69, 178 |
| BspMI | ACCTGC | 1 cut(s) | 183 |
| BssECI | CCNNGG | 1 cut(s) | 102 |
| Bst2UI | CCWGG | 2 cut(s) | 103, 129 |
| BstBAI | YACGTR | 1 cut(s) | 227 |
| BstDEI | CTNAG | 3 cut(s) | 134, 207, 237 |
| BstNI | CCWGG | 2 cut(s) | 103, 129 |
| BstSCI | CCNGG | 2 cut(s) | 101, 127 |
| BstSNI | TACGTA | 1 cut(s) | 227 |
| BsuRI | GGCC | 1 cut(s) | 127 |
| BveI | ACCTGC | 1 cut(s) | 183 |
| CseI | GACGC | 1 cut(s) | 207 |
| CviJI | RGCY | 3 cut(s) | 101, 127, 206 |
| CviKI_1 | RGCY | 3 cut(s) | 101, 127, 206 |
| DdeI | CTNAG | 3 cut(s) | 134, 207, 237 |
| EaeI | YGGCCR | 1 cut(s) | 125 |
| Eco105I | TACGTA | 1 cut(s) | 227 |
| Eco32I | GATATC | 1 cut(s) | 265 |
| EcoRII | CCWGG | 2 cut(s) | 101, 127 |
| EcoRV | GATATC | 1 cut(s) | 265 |
| FaiI | YATR | 2 cut(s) | 32, 54 |
| FspBI | CTAG | 2 cut(s) | 44, 152 |
| HaeIII | GGCC | 1 cut(s) | 127 |
| HgaI | GACGC | 1 cut(s) | 207 |
| Hpy188I | TCNGA | 2 cut(s) | 176, 203 |
| Hpy188III | TCNNGA | 1 cut(s) | 71 |
| Hpy99I | CGWCG | 1 cut(s) | 223 |
| HpyCH4IV | ACGT | 2 cut(s) | 226, 244 |
| HpyF3I | CTNAG | 3 cut(s) | 134, 207, 237 |
| HpySE526I | ACGT | 2 cut(s) | 226, 244 |
| LpnPI | CCDG | 9 cut(s) | 84, 88, 114, 115, 141, 149, 178, 235, 249 |
| MaeI | CTAG | 2 cut(s) | 44, 152 |
| MaeII | ACGT | 2 cut(s) | 226, 244 |
| MaeIII | GTNAC | 2 cut(s) | 17, 227 |
| MluCI | AATT | 1 cut(s) | 39 |
| MmeI | TCCRAC | 1 cut(s) | 240 |
| MnlI | CCTC | 2 cut(s) | 190, 242 |
| MseI | TTAA | 1 cut(s) | 38 |
| MspR9I | CCNGG | 2 cut(s) | 103, 129 |
| MvaI | CCWGG | 2 cut(s) | 103, 129 |
| NlaIV | GGNNCC | 2 cut(s) | 69, 178 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 89 |
| Ppu21I | YACGTR | 1 cut(s) | 227 |
| Psp1406I | AACGTT | 1 cut(s) | 244 |
| Psp6I | CCWGG | 2 cut(s) | 101, 127 |
| PspGI | CCWGG | 2 cut(s) | 101, 127 |
| PspN4I | GGNNCC | 2 cut(s) | 69, 178 |
| SaqAI | TTAA | 1 cut(s) | 38 |
| ScrFI | CCNGG | 2 cut(s) | 103, 129 |
| SetI | ASST | 7 cut(s) | 133, 182, 197, 208, 229, 234, 247 |
| SnaBI | TACGTA | 1 cut(s) | 227 |
| Sse9I | AATT | 1 cut(s) | 39 |
| SspMI | CTAG | 2 cut(s) | 44, 152 |
| StyD4I | CCNGG | 2 cut(s) | 101, 127 |
| TaiI | ACGT | 2 cut(s) | 229, 247 |
| TaqI | TCGA | 1 cut(s) | 182 |
| TasI | AATT | 1 cut(s) | 39 |
| Tru1I | TTAA | 1 cut(s) | 38 |
| Tru9I | TTAA | 1 cut(s) | 38 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XspI | CTAG | 2 cut(s) | 44, 152 |