Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0001344

Physical Location & Seq

Genomic Coordinates Forward (+)

28665839 .. 28682977

Gene Structure 17139 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG287400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1227 bp

ATGATGATAAATCTGGAGACTTGGACTCTTGGAGCACAGAGGCGCAGAGCAGTCCGACTCAGCGACCCGGCGATCTGCAAAAGTGCAAGGCTGGAAGCCTGGAACCAGCAACCCATCTCCGGTAGTCCGGTCTCCGAGCTCCCCACCGCCACCAGCAACCCATCTGGGCCGTCTGGCTGTCTCCGTGGTTCTTGCATTGCTGAAAGTCAAGACACTGGGTCTTCGGCAACCTCATCAAGATTTGCAGTTGGCCAGTTGTCTACTTATCTGGCCTCAGGCCTGCAATTTCAATATCATCAACAGGCACATAAGGTGGACTGCATTGTGTTCGACAAGACAGGGACTCTTACAATTGGGAAGCCACTGGTTGTTAACACACGACTCATGAAAAATATAGTGCTTCGAGAATTCTATGAACTTGTTGCTGCAGCTGAGGTTAACAGTGAACACCCCTTGGCCAAGGCCATTGTTGAGTATGCCAAAAAATTCAGAGAAGATGAAGAGAATCCAGCCGGGCCAGAAGCGCATGACTTTGCCTCCATTACTGGTCACGGGGTGAAGGCTATTGTTCAGGGCAGGGAAATAATTGTGGGGAACAAGAGCTTGATGGTGGACCAGAACATTGCAGTTCCACTCGATGCAGAAGACTACCTAGCAGAAGCTGAAGGGCTGGCTCAAACTGGGATTCTAGTAGCCATAGATGGAGAAGTGGCTGGAGTTCTAGCAATATCTGATCCACTGAAACCAGGTGCTCAAGAAGTAATTACCATACTCAAGTCAATGAATGTTAGAAGCATAATGGTGACAGGTGACAATTGGGGAATTGCAAATTCTATTGCCAATGAAGTTGGTATTGATACTGTTATAGCCGAAGCGAAACCTGATCACCAGAAAGCAGAGAAAGTGAAGGAATTGCAGGCTTCAGGCTACACTGTGGCGATGGTGGGAGATGGCATCAATGACTCACCAGCACTTGTGGCGGCAGATTATTCTTTGCCTCCTCAAGTGGGAAGGAGTTGGGAAAGTGGAAATCCCCATGAGGCTGTAGATTTCTGGGGTTTGACCAAAACCGAGATGCTTTTTCATCCAAGATTCAAATGGAAGTCCCCTACTAAGCGTATTGGAAATCTCTATGTTTTAGTATTTGACGCTTTAATTTTGAGAGAGGGACTCACACAAGCTTTGGTCAAAGCCTTTGACTCAAAGGTTAAAGTTAGATACATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0008150 GO:0008324 GO:0009636 GO:0010035 GO:0010038 GO:0010273 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042221 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046688 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061687 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0097501 GO:0098655 GO:0098660 GO:0098662 GO:0098754 GO:0099131 GO:0099132 GO:1990169

KEGG Pathways

Metabolic & Signaling

ko01524 ko04016 map01524 map04016

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

408

Amino Acids

44.14

Weight (kDa)

5.71

Isoelectric Point (pI)

31.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase	PF00702	105 - 329	1.7e-32	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001344)

Species	Orthologous Gene IDs
malus_domestica	MD02G1192500.v1.1 MD03G1138700.v1.1 MD03G1180400.v1.1 MD03G1181400.v1.1 MD03G1182600.v1.1
pyrus_communis	pycom02g15570 pycom02g15620
rosa_chinensis	RchiOBHm_Chr2g0138301 RchiOBHm_Chr7g0198201
rosa_laevigata	RLG00000003887 RLG00000035827
rosa_multiflora	Rmu_sc0000221.1_g000001 Rmu_sc0002263.1_g000023 Rmu_sc0003465.1_g000045
rosa_roxburghii	Rroxscaffold_2G00106950 Rroxscaffold_2G00141500 Rroxscaffold_3G00232230 Rroxscaffold_5G00354760 Rroxscaffold_5G00354830
rosa_rugosa	Rorug01G0072400 Rorug01G0080400 Rorug02G0391900 Rorug03G0335000 Rorug05G0277500 Rorug06G0193000
rosa_samantha	Rh1AG099400 Rh1DG291600 Rh3BG287400 Rh3BG289600 Rh4BG446000 Rh4CG463300 Rh4DG336400 Rh5BG050800 Rh5BG085000 Rh5CG336100 Rh5CG336700 Rh5DG044200 Rh6BG050400 Rh7AG169000 Rh7AG169400 Rh7BG078400 Rh7BG172600 Rh7BG434400 Rh7BG434500 Rh7CG179100 Rh7CG468500 Rh7CG479100 Rh7DG171900 Rh7DG271300
rosa_wichuraiana	Rw1G013030 Rw3G006160 Rw4G015230 Rw5G030130 Rw6G044730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	260
AciI	CCGC	2 cut(s)	147, 980
AclWI	GGATC	1 cut(s)	728
AcoI	YGGCCR	2 cut(s)	250, 456
AcsI	RAATTY	3 cut(s)	407, 485, 829
AcuI	CTGAAG	2 cut(s)	684, 906
AdeI	CACNNNGTG	1 cut(s)	556
AfiI	CCNNNNNNNGG	2 cut(s)	119, 1007
AflIII	ACRYGT	1 cut(s)	1221
AgsI	TTSAA	2 cut(s)	290, 1096
AhdI	GACNNNNNGTC	1 cut(s)	217
AjnI	CCWGG	2 cut(s)	98, 745
AluBI	AGCT	5 cut(s)	139, 431, 603, 662, 1181
AluI	AGCT	5 cut(s)	139, 431, 603, 662, 1181
Alw21I	GWGCWC	3 cut(s)	37, 141, 754
Alw26I	GTCTC	3 cut(s)	11, 136, 185
AlwI	GGATC	1 cut(s)	728
AlwNI	CAGNNNCTG	1 cut(s)	662
AoxI	GGCC	7 cut(s)	167, 250, 270, 277, 456, 462, 515
ApeKI	GCWGC	2 cut(s)	425, 428
ApoI	RAATTY	3 cut(s)	407, 485, 829
AspLEI	GCGC	2 cut(s)	45, 526
AspS9I	GGNCC	3 cut(s)	167, 515, 613
AsuC2I	CCSGG	2 cut(s)	68, 514
AsuHPI	GGTGA	5 cut(s)	568, 814, 821, 878, 957
AvaII	GGWCC	1 cut(s)	613
AxyI	CCTNAGG	1 cut(s)	274
BalI	TGGCCA	2 cut(s)	252, 458
BanII	GRGCYC	1 cut(s)	141
BbsI	GAAGAC	2 cut(s)	213, 651
Bbv12I	GWGCWC	3 cut(s)	37, 141, 754
BbvCI	CCTCAGC	1 cut(s)	432
BbvI	GCAGC	2 cut(s)	412, 440
BccI	CCATC	6 cut(s)	122, 169, 601, 695, 934, 944
BceAI	ACGGC	1 cut(s)	154
BcgI	CGANNNNNNTGC	2 cut(s)	310, 344
BciT130I	CCWGG	2 cut(s)	100, 747
BclI	TGATCA	1 cut(s)	883
BcnI	CCSGG	2 cut(s)	68, 514
BcoDI	GTCTC	3 cut(s)	11, 136, 185
BfaI	CTAG	3 cut(s)	653, 689, 722
BfmI	CTRYAG	2 cut(s)	426, 1044
BisI	GCNGC	3 cut(s)	426, 429, 981
BlsI	GCNGC	3 cut(s)	427, 430, 982
Bme1390I	CCNGG	4 cut(s)	68, 100, 514, 747
Bme18I	GGWCC	1 cut(s)	613
BmeRI	GACNNNNNGTC	1 cut(s)	217
BmgT120I	GGNCC	3 cut(s)	167, 515, 613
BmiI	GGNNCC	1 cut(s)	104
BmrFI	CCNGG	4 cut(s)	68, 100, 514, 747
BmrI	ACTGGG	2 cut(s)	225, 690
BmsI	GCATC	3 cut(s)	628, 963, 1065
BmuI	ACTGGG	2 cut(s)	225, 690
BpiI	GAAGAC	2 cut(s)	213, 651
BplI	GAGNNNNNCTC	2 cut(s)	1155, 1187
BpmI	CTGGAG	2 cut(s)	35, 735
Bpu10I	CCTNAGC	1 cut(s)	432
BpuEI	CTTGAG	3 cut(s)	738, 758, 987
BpuMI	CCSGG	2 cut(s)	68, 514
BsaI	GGTCTC	1 cut(s)	136
BsaJI	CCNNGG	3 cut(s)	184, 453, 459
BsaWI	WCCGGW	2 cut(s)	119, 127
BsaXI	ACNNNNNCTCC	2 cut(s)	521, 551
Bsc4I	CCNNNNNNNGG	2 cut(s)	119, 1007
Bse1I	ACTGG	5 cut(s)	220, 253, 369, 550, 685
Bse21I	CCTNAGG	1 cut(s)	274
Bse3DI	GCAATG	2 cut(s)	195, 621
BseBI	CCWGG	2 cut(s)	100, 747
BseDI	CCNNGG	3 cut(s)	184, 453, 459
BseGI	GGATG	1 cut(s)	1084
BseLI	CCNNNNNNNGG	2 cut(s)	119, 1007
BseMI	GCAATG	2 cut(s)	195, 621
BseMII	CTCAG	3 cut(s)	73, 288, 423
BseNI	ACTGG	5 cut(s)	220, 253, 369, 550, 685
BseRI	GAGGAG	1 cut(s)	990
BseXI	GCAGC	2 cut(s)	412, 440
BshFI	GGCC	7 cut(s)	169, 252, 272, 279, 458, 464, 517
BsiHKAI	GWGCWC	3 cut(s)	37, 141, 754
BsiSI	CCGG	4 cut(s)	68, 120, 128, 513
BslFI	GGGAC	3 cut(s)	355, 1090, 1182
BslI	CCNNNNNNNGG	2 cut(s)	119, 1007
BsmAI	GTCTC	3 cut(s)	11, 136, 185
BsmFI	GGGAC	3 cut(s)	355, 1090, 1182
BsnI	GGCC	7 cut(s)	169, 252, 272, 279, 458, 464, 517
Bso31I	GGTCTC	1 cut(s)	136
Bsp1286I	GDGCHC	3 cut(s)	37, 141, 754
Bsp143I	GATC	3 cut(s)	72, 733, 883
BspACI	CCGC	2 cut(s)	147, 980
BspANI	GGCC	7 cut(s)	169, 252, 272, 279, 458, 464, 517
BspCNI	CTCAG	3 cut(s)	72, 287, 424
BspHI	TCATGA	1 cut(s)	384
BspLI	GGNNCC	1 cut(s)	104
BspMAI	CTGCAG	1 cut(s)	430
BspPI	GGATC	1 cut(s)	728
BspTNI	GGTCTC	1 cut(s)	136
BsrDI	GCAATG	2 cut(s)	195, 621
BsrI	ACTGG	5 cut(s)	220, 253, 369, 550, 685
BssECI	CCNNGG	3 cut(s)	184, 453, 459
BssMI	GATC	3 cut(s)	72, 733, 883
BssT1I	CCWWGG	2 cut(s)	453, 459
Bst2UI	CCWGG	2 cut(s)	100, 747
Bst4CI	ACNGT	3 cut(s)	443, 862, 934
Bst6I	CTCTTC	1 cut(s)	495
BstC8I	GCNNGC	3 cut(s)	281, 672, 918
BstDEI	CTNAG	4 cut(s)	59, 274, 432, 1113
BstDSI	CCRYGG	1 cut(s)	184
BstF5I	GGATG	1 cut(s)	1084
BstHHI	GCGC	2 cut(s)	45, 526
BstKTI	GATC	3 cut(s)	75, 736, 886
BstMAI	GTCTC	3 cut(s)	11, 136, 185
BstMBI	GATC	3 cut(s)	72, 733, 883
BstMWI	GCNNNNNNNGC	2 cut(s)	523, 977
BstNI	CCWGG	2 cut(s)	100, 747
BstNSI	RCATGY	1 cut(s)	1225
BstSCI	CCNGG	4 cut(s)	66, 98, 512, 745
BstSFI	CTRYAG	2 cut(s)	426, 1044
BstV1I	GCAGC	2 cut(s)	412, 440
BstV2I	GAAGAC	2 cut(s)	213, 651
Bsu36I	CCTNAGG	1 cut(s)	274
BsuRI	GGCC	7 cut(s)	169, 252, 272, 279, 458, 464, 517
BtgI	CCRYGG	1 cut(s)	184
BtgZI	GCGATG	1 cut(s)	953
BtsCI	GGATG	1 cut(s)	1084
BtsIMutI	CAGTG	5 cut(s)	213, 362, 448, 737, 930
Cac8I	GCNNGC	3 cut(s)	281, 672, 918
CaiI	CAGNNNCTG	1 cut(s)	662
CciI	TCATGA	1 cut(s)	384
CfoI	GCGC	2 cut(s)	45, 526
Cfr13I	GGNCC	3 cut(s)	167, 515, 613
CseI	GACGC	1 cut(s)	1157
CsiI	ACCWGGT	1 cut(s)	745
CviAII	CATG	4 cut(s)	385, 527, 1037, 1222
DdeI	CTNAG	4 cut(s)	59, 274, 432, 1113
DpnI	GATC	3 cut(s)	74, 735, 885
DpnII	GATC	3 cut(s)	72, 733, 883
DraIII	CACNNNGTG	1 cut(s)	556
DriI	GACNNNNNGTC	1 cut(s)	217
EaeI	YGGCCR	2 cut(s)	250, 456
Eam1104I	CTCTTC	1 cut(s)	495
Eam1105I	GACNNNNNGTC	1 cut(s)	217
EarI	CTCTTC	1 cut(s)	495
Ecl136II	GAGCTC	1 cut(s)	139
Eco130I	CCWWGG	2 cut(s)	453, 459
Eco147I	AGGCCT	1 cut(s)	279
Eco24I	GRGCYC	1 cut(s)	141
Eco31I	GGTCTC	1 cut(s)	136
Eco47I	GGWCC	1 cut(s)	613
Eco53kI	GAGCTC	1 cut(s)	139
Eco57I	CTGAAG	2 cut(s)	684, 906
Eco81I	CCTNAGG	1 cut(s)	274
EcoICRI	GAGCTC	1 cut(s)	139
EcoRI	GAATTC	1 cut(s)	407
EcoRII	CCWGG	2 cut(s)	98, 745
EcoT14I	CCWWGG	2 cut(s)	453, 459
EcoT38I	GRGCYC	1 cut(s)	141
ErhI	CCWWGG	2 cut(s)	453, 459
FaeI	CATG	4 cut(s)	388, 530, 1040, 1225
FaqI	GGGAC	3 cut(s)	355, 1090, 1182
FatI	CATG	4 cut(s)	384, 526, 1036, 1221
FbaI	TGATCA	1 cut(s)	883
FblI	GTMKAC	1 cut(s)	260
Fnu4HI	GCNGC	3 cut(s)	426, 429, 981
FokI	GGATG	1 cut(s)	1071
FriOI	GRGCYC	1 cut(s)	141
Fsp4HI	GCNGC	3 cut(s)	426, 429, 981
FspBI	CTAG	3 cut(s)	653, 689, 722
GlaI	GCGC	2 cut(s)	44, 525
GluI	GCNGC	3 cut(s)	426, 429, 981
GsuI	CTGGAG	2 cut(s)	35, 735
HaeIII	GGCC	7 cut(s)	169, 252, 272, 279, 458, 464, 517
HapII	CCGG	4 cut(s)	68, 120, 128, 513
HgaI	GACGC	1 cut(s)	1157
HhaI	GCGC	2 cut(s)	45, 526
Hin1II	CATG	4 cut(s)	388, 530, 1040, 1225
Hin6I	GCGC	2 cut(s)	43, 524
HinP1I	GCGC	2 cut(s)	43, 524
HincII	GTYRAC	2 cut(s)	373, 439
HindII	GTYRAC	2 cut(s)	373, 439
HindIII	AAGCTT	1 cut(s)	1179
HpaI	GTTAAC	2 cut(s)	373, 439
HpaII	CCGG	4 cut(s)	68, 120, 128, 513
HphI	GGTGA	5 cut(s)	568, 814, 821, 878, 957
Hpy166II	GTNNAC	6 cut(s)	261, 316, 373, 439, 446, 613
Hpy188I	TCNGA	4 cut(s)	56, 136, 491, 733
Hpy188III	TCNNGA	6 cut(s)	14, 209, 237, 385, 404, 755
Hpy8I	GTNNAC	6 cut(s)	261, 316, 373, 439, 446, 613
HpyAV	CCTTC	4 cut(s)	553, 659, 901, 1005
HpyCH4III	ACNGT	3 cut(s)	443, 862, 934
HpyF10VI	GCNNNNNNNGC	2 cut(s)	523, 977
HpyF3I	CTNAG	4 cut(s)	59, 274, 432, 1113
Hsp92II	CATG	4 cut(s)	388, 530, 1040, 1225
HspAI	GCGC	2 cut(s)	43, 524
Ksp22I	TGATCA	1 cut(s)	883
KspAI	GTTAAC	2 cut(s)	373, 439
Kzo9I	GATC	3 cut(s)	72, 733, 883
LmnI	GCTCC	2 cut(s)	32, 144
Lsp1109I	GCAGC	2 cut(s)	412, 440
LweI	GCATC	3 cut(s)	628, 963, 1065
MabI	ACCWGGT	1 cut(s)	745
MaeI	CTAG	3 cut(s)	653, 689, 722
MaeIII	GTNAC	3 cut(s)	548, 802, 809
MalI	GATC	3 cut(s)	74, 735, 885
MboI	GATC	3 cut(s)	72, 733, 883
MboII	GAAGA	4 cut(s)	213, 506, 512, 656
MfeI	CAATTG	2 cut(s)	351, 814
MhlI	GDGCHC	3 cut(s)	37, 141, 754
MlsI	TGGCCA	2 cut(s)	252, 458
MluNI	TGGCCA	2 cut(s)	252, 458
MlyI	GAGTC	7 cut(s)	19, 51, 337, 375, 956, 1164, 1193
MmeI	TCCRAC	1 cut(s)	79
MnlI	CCTC	9 cut(s)	33, 241, 283, 427, 547, 1008, 1011, 1033, 1159
Mox20I	TGGCCA	2 cut(s)	252, 458
MscI	TGGCCA	2 cut(s)	252, 458
MseI	TTAA	4 cut(s)	372, 438, 1154, 1209
MslI	CAYNNNNRTG	1 cut(s)	800
Msp20I	TGGCCA	2 cut(s)	252, 458
MspA1I	CMGCKG	1 cut(s)	431
MspI	CCGG	4 cut(s)	68, 120, 128, 513
MspR9I	CCNGG	4 cut(s)	68, 100, 514, 747
MunI	CAATTG	2 cut(s)	351, 814
MvaI	CCWGG	2 cut(s)	100, 747
MwoI	GCNNNNNNNGC	2 cut(s)	523, 977
NciI	CCSGG	2 cut(s)	68, 514
NdeII	GATC	3 cut(s)	72, 733, 883
NlaIII	CATG	4 cut(s)	388, 530, 1040, 1225
NlaIV	GGNNCC	1 cut(s)	104
NmuCI	GTSAC	3 cut(s)	548, 802, 809
NspI	RCATGY	1 cut(s)	1225
PagI	TCATGA	1 cut(s)	384
PceI	AGGCCT	1 cut(s)	279
PciI	ACATGT	1 cut(s)	1221
PfeI	GAWTC	3 cut(s)	505, 685, 1092
PkrI	GCNGC	3 cut(s)	427, 430, 982
PleI	GAGTC	7 cut(s)	19, 51, 337, 375, 956, 1164, 1193
PpsI	GAGTC	7 cut(s)	19, 51, 337, 375, 956, 1164, 1193
PscI	ACATGT	1 cut(s)	1221
Psp124BI	GAGCTC	1 cut(s)	141
Psp6I	CCWGG	2 cut(s)	98, 745
PspGI	CCWGG	2 cut(s)	98, 745
PspN4I	GGNNCC	1 cut(s)	104
PspPI	GGNCC	3 cut(s)	167, 515, 613
PstI	CTGCAG	1 cut(s)	430
PstNI	CAGNNNCTG	1 cut(s)	662
PvuII	CAGCTG	1 cut(s)	431
RseI	CAYNNNNRTG	1 cut(s)	800
SacI	GAGCTC	1 cut(s)	141
SaqAI	TTAA	4 cut(s)	372, 438, 1154, 1209
SatI	GCNGC	3 cut(s)	426, 429, 981
Sau3AI	GATC	3 cut(s)	72, 733, 883
Sau96I	GGNCC	3 cut(s)	167, 515, 613
SchI	GAGTC	7 cut(s)	19, 51, 337, 375, 956, 1164, 1193
ScrFI	CCNGG	4 cut(s)	68, 100, 514, 747
SduI	GDGCHC	3 cut(s)	37, 141, 754
SexAI	ACCWGGT	1 cut(s)	745
SfaNI	GCATC	3 cut(s)	628, 963, 1065
SfcI	CTRYAG	2 cut(s)	426, 1044
SinI	GGWCC	1 cut(s)	613
SmiMI	CAYNNNNRTG	1 cut(s)	800
SmlI	CTYRAG	3 cut(s)	753, 773, 1002
SmoI	CTYRAG	3 cut(s)	753, 773, 1002
SseBI	AGGCCT	1 cut(s)	279
SsiI	CCGC	2 cut(s)	147, 980
SspMI	CTAG	3 cut(s)	653, 689, 722
SstI	GAGCTC	1 cut(s)	141
StuI	AGGCCT	1 cut(s)	279
StyD4I	CCNGG	4 cut(s)	66, 98, 512, 745
StyI	CCWWGG	2 cut(s)	453, 459
TaaI	ACNGT	3 cut(s)	443, 862, 934
TaqI	TCGA	3 cut(s)	330, 403, 636
TauI	GCSGC	1 cut(s)	983
TfiI	GAWTC	3 cut(s)	505, 685, 1092
Tru1I	TTAA	4 cut(s)	372, 438, 1154, 1209
Tru9I	TTAA	4 cut(s)	372, 438, 1154, 1209
TscAI	CASTG	5 cut(s)	220, 369, 448, 744, 937
TseFI	GTSAC	3 cut(s)	548, 802, 809
TseI	GCWGC	2 cut(s)	425, 428
Tsp45I	GTSAC	3 cut(s)	548, 802, 809
TspDTI	ATGAA	6 cut(s)	401, 429, 513, 797, 858, 1073
TspGWI	ACGGA	1 cut(s)	173
TspRI	CASTG	5 cut(s)	220, 369, 448, 744, 937
VpaK11BI	GGWCC	1 cut(s)	613
XapI	RAATTY	3 cut(s)	407, 485, 829
XceI	RCATGY	1 cut(s)	1225
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1095
XmiI	GTMKAC	1 cut(s)	260
XspI	CTAG	3 cut(s)	653, 689, 722

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.