Belongs to the isocitrate and isopropylmalate dehydrogenases family
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1142 |
| AciI | CCGC | 2 cut(s) | 989, 1204 |
| AclWI | GGATC | 5 cut(s) | 394, 407, 1129, 1223, 1389 |
| AcoI | YGGCCR | 1 cut(s) | 878 |
| AcsI | RAATTY | 3 cut(s) | 149, 776, 1442 |
| AcuI | CTGAAG | 3 cut(s) | 468, 932, 1200 |
| AcyI | GRCGYC | 2 cut(s) | 1139, 1452 |
| AfaI | GTAC | 6 cut(s) | 386, 464, 580, 680, 735, 1195 |
| AflII | CTTAAG | 1 cut(s) | 458 |
| AgsI | TTSAA | 7 cut(s) | 129, 440, 523, 529, 934, 1175, 1337 |
| AjnI | CCWGG | 3 cut(s) | 628, 709, 945 |
| AluBI | AGCT | 7 cut(s) | 204, 352, 452, 800, 962, 1178, 1256 |
| AluI | AGCT | 7 cut(s) | 204, 352, 452, 800, 962, 1178, 1256 |
| Alw26I | GTCTC | 3 cut(s) | 10, 652, 1425 |
| AlwI | GGATC | 5 cut(s) | 394, 407, 1129, 1223, 1389 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1429 |
| Ama87I | CYCGRG | 2 cut(s) | 321, 395 |
| AoxI | GGCC | 3 cut(s) | 878, 1107, 1403 |
| ApeKI | GCWGC | 2 cut(s) | 986, 1184 |
| ApoI | RAATTY | 3 cut(s) | 149, 776, 1442 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 518 |
| AspLEI | GCGC | 1 cut(s) | 788 |
| AspS9I | GGNCC | 4 cut(s) | 707, 744, 1108, 1403 |
| AsuHPI | GGTGA | 3 cut(s) | 223, 292, 683 |
| AvaI | CYCGRG | 2 cut(s) | 321, 395 |
| AvaII | GGWCC | 2 cut(s) | 707, 744 |
| AxyI | CCTNAGG | 1 cut(s) | 1407 |
| BaeGI | GKGCMC | 1 cut(s) | 1157 |
| BalI | TGGCCA | 1 cut(s) | 880 |
| BamHI | GGATCC | 1 cut(s) | 399 |
| BauI | CACGAG | 2 cut(s) | 507, 1282 |
| BbsI | GAAGAC | 1 cut(s) | 761 |
| BbvCI | CCTCAGC | 1 cut(s) | 843 |
| BbvI | GCAGC | 2 cut(s) | 973, 1196 |
| BccI | CCATC | 5 cut(s) | 734, 917, 1076, 1154, 1292 |
| BceAI | ACGGC | 2 cut(s) | 48, 1439 |
| BciT130I | CCWGG | 3 cut(s) | 630, 711, 947 |
| BclI | TGATCA | 1 cut(s) | 673 |
| BcoDI | GTCTC | 3 cut(s) | 10, 652, 1425 |
| BfaI | CTAG | 2 cut(s) | 1416, 1485 |
| BfmI | CTRYAG | 1 cut(s) | 604 |
| BfrI | CTTAAG | 1 cut(s) | 458 |
| BisI | GCNGC | 2 cut(s) | 987, 1185 |
| BlsI | GCNGC | 2 cut(s) | 988, 1186 |
| BmcAI | AGTACT | 1 cut(s) | 386 |
| Bme1390I | CCNGG | 3 cut(s) | 630, 711, 947 |
| Bme18I | GGWCC | 2 cut(s) | 707, 744 |
| BmeT110I | CYCGRG | 2 cut(s) | 321, 395 |
| BmgT120I | GGNCC | 4 cut(s) | 707, 744, 1108, 1403 |
| BmiI | GGNNCC | 3 cut(s) | 401, 745, 1354 |
| BmrFI | CCNGG | 3 cut(s) | 630, 711, 947 |
| BmsI | GCATC | 3 cut(s) | 403, 682, 1349 |
| BpiI | GAAGAC | 1 cut(s) | 761 |
| BpmI | CTGGAG | 1 cut(s) | 389 |
| Bpu10I | CCTNAGC | 1 cut(s) | 843 |
| Bsa29I | ATCGAT | 1 cut(s) | 1266 |
| BsaHI | GRCGYC | 2 cut(s) | 1139, 1452 |
| BsaI | GGTCTC | 2 cut(s) | 10, 1425 |
| BsaJI | CCNNGG | 5 cut(s) | 1111, 1189, 1377, 1399, 1455 |
| BsaWI | WCCGGW | 1 cut(s) | 1212 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 478, 508, 1044, 1074 |
| Bse1I | ACTGG | 2 cut(s) | 787, 1152 |
| Bse21I | CCTNAGG | 1 cut(s) | 1407 |
| Bse3DI | GCAATG | 1 cut(s) | 1309 |
| BseBI | CCWGG | 3 cut(s) | 630, 711, 947 |
| BseCI | ATCGAT | 1 cut(s) | 1266 |
| BseDI | CCNNGG | 5 cut(s) | 1111, 1189, 1377, 1399, 1455 |
| BseGI | GGATG | 3 cut(s) | 113, 1093, 1395 |
| BseMI | GCAATG | 1 cut(s) | 1309 |
| BseMII | CTCAG | 2 cut(s) | 834, 1436 |
| BseNI | ACTGG | 2 cut(s) | 787, 1152 |
| BseRI | GAGGAG | 2 cut(s) | 556, 1382 |
| BseSI | GKGCMC | 1 cut(s) | 1157 |
| BseXI | GCAGC | 2 cut(s) | 973, 1196 |
| BshFI | GGCC | 3 cut(s) | 880, 1109, 1405 |
| BshVI | ATCGAT | 1 cut(s) | 1266 |
| BsiHKCI | CYCGRG | 2 cut(s) | 321, 395 |
| BsiSI | CCGG | 1 cut(s) | 1213 |
| BslFI | GGGAC | 1 cut(s) | 568 |
| BsmAI | GTCTC | 3 cut(s) | 10, 652, 1425 |
| BsmFI | GGGAC | 1 cut(s) | 568 |
| BsnI | GGCC | 3 cut(s) | 880, 1109, 1405 |
| Bso31I | GGTCTC | 2 cut(s) | 10, 1425 |
| BsoBI | CYCGRG | 2 cut(s) | 321, 395 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1157 |
| Bsp19I | CCATGG | 2 cut(s) | 1189, 1399 |
| BspACI | CCGC | 2 cut(s) | 989, 1204 |
| BspANI | GGCC | 3 cut(s) | 880, 1109, 1405 |
| BspCNI | CTCAG | 2 cut(s) | 835, 1435 |
| BspDI | ATCGAT | 1 cut(s) | 1266 |
| BspLI | GGNNCC | 3 cut(s) | 401, 745, 1354 |
| BspMAI | CTGCAG | 1 cut(s) | 608 |
| BspPI | GGATC | 5 cut(s) | 394, 407, 1129, 1223, 1389 |
| BspTI | CTTAAG | 1 cut(s) | 458 |
| BspTNI | GGTCTC | 2 cut(s) | 10, 1425 |
| BsrDI | GCAATG | 1 cut(s) | 1309 |
| BsrI | ACTGG | 2 cut(s) | 787, 1152 |
| BssECI | CCNNGG | 5 cut(s) | 1111, 1189, 1377, 1399, 1455 |
| BssNI | GRCGYC | 2 cut(s) | 1139, 1452 |
| BssSI | CACGAG | 2 cut(s) | 507, 1282 |
| BssT1I | CCWWGG | 4 cut(s) | 1111, 1189, 1377, 1399 |
| Bst2BI | CACGAG | 2 cut(s) | 507, 1282 |
| Bst2UI | CCWGG | 3 cut(s) | 630, 711, 947 |
| Bst4CI | ACNGT | 4 cut(s) | 583, 1010, 1198, 1357 |
| BstACI | GRCGYC | 2 cut(s) | 1139, 1452 |
| BstAFI | CTTAAG | 1 cut(s) | 458 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 692 |
| BstC8I | GCNNGC | 2 cut(s) | 206, 1069 |
| BstDEI | CTNAG | 4 cut(s) | 843, 890, 1407, 1422 |
| BstDSI | CCRYGG | 3 cut(s) | 1189, 1399, 1455 |
| BstEII | GGTNACC | 1 cut(s) | 280 |
| BstF5I | GGATG | 3 cut(s) | 113, 1093, 1395 |
| BstHHI | GCGC | 1 cut(s) | 788 |
| BstMAI | GTCTC | 3 cut(s) | 10, 652, 1425 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 210, 692, 792, 1184, 1239, 1248 |
| BstNI | CCWGG | 3 cut(s) | 630, 711, 947 |
| BstNSI | RCATGY | 2 cut(s) | 665, 1071 |
| BstPI | GGTNACC | 1 cut(s) | 280 |
| BstSCI | CCNGG | 3 cut(s) | 628, 709, 945 |
| BstSFI | CTRYAG | 1 cut(s) | 604 |
| BstSLI | GKGCMC | 1 cut(s) | 1157 |
| BstV1I | GCAGC | 2 cut(s) | 973, 1196 |
| BstV2I | GAAGAC | 1 cut(s) | 761 |
| BstX2I | RGATCY | 3 cut(s) | 399, 1121, 1381 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1118, 1315 |
| BstYI | RGATCY | 3 cut(s) | 399, 1121, 1381 |
| Bsu15I | ATCGAT | 1 cut(s) | 1266 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1407 |
| BsuRI | GGCC | 3 cut(s) | 880, 1109, 1405 |
| BsuTUI | ATCGAT | 1 cut(s) | 1266 |
| BtgI | CCRYGG | 3 cut(s) | 1189, 1399, 1455 |
| BtsCI | GGATG | 3 cut(s) | 113, 1093, 1395 |
| BtsI | GCAGTG | 1 cut(s) | 858 |
| BtsIMutI | CAGTG | 1 cut(s) | 858 |
| Cac8I | GCNNGC | 2 cut(s) | 206, 1069 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1429 |
| CfoI | GCGC | 1 cut(s) | 788 |
| Cfr13I | GGNCC | 4 cut(s) | 707, 744, 1108, 1403 |
| ClaI | ATCGAT | 1 cut(s) | 1266 |
| CseI | GACGC | 1 cut(s) | 1460 |
| Csp6I | GTAC | 6 cut(s) | 385, 463, 579, 679, 734, 1194 |
| CviAII | CATG | 7 cut(s) | 662, 808, 853, 1068, 1190, 1276, 1400 |
| CviQI | GTAC | 6 cut(s) | 385, 463, 579, 679, 734, 1194 |
| DdeI | CTNAG | 4 cut(s) | 843, 890, 1407, 1422 |
| DraI | TTTAAA | 1 cut(s) | 573 |
| EaeI | YGGCCR | 1 cut(s) | 878 |
| Eco130I | CCWWGG | 4 cut(s) | 1111, 1189, 1377, 1399 |
| Eco31I | GGTCTC | 2 cut(s) | 10, 1425 |
| Eco32I | GATATC | 1 cut(s) | 379 |
| Eco47I | GGWCC | 2 cut(s) | 707, 744 |
| Eco57I | CTGAAG | 3 cut(s) | 468, 932, 1200 |
| Eco81I | CCTNAGG | 1 cut(s) | 1407 |
| Eco88I | CYCGRG | 2 cut(s) | 321, 395 |
| Eco91I | GGTNACC | 1 cut(s) | 280 |
| EcoO109I | RGGNCCY | 1 cut(s) | 707 |
| EcoO65I | GGTNACC | 1 cut(s) | 280 |
| EcoRII | CCWGG | 3 cut(s) | 628, 709, 945 |
| EcoRV | GATATC | 1 cut(s) | 379 |
| EcoT14I | CCWWGG | 4 cut(s) | 1111, 1189, 1377, 1399 |
| ErhI | CCWWGG | 4 cut(s) | 1111, 1189, 1377, 1399 |
| FaeI | CATG | 7 cut(s) | 665, 811, 856, 1071, 1193, 1279, 1403 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 336, 368, 341, 373, 441, 473, 926, 958 |
| FaqI | GGGAC | 1 cut(s) | 568 |
| FatI | CATG | 7 cut(s) | 661, 807, 852, 1067, 1189, 1275, 1399 |
| FauI | CCCGC | 2 cut(s) | 982, 1211 |
| FbaI | TGATCA | 1 cut(s) | 673 |
| Fnu4HI | GCNGC | 2 cut(s) | 987, 1185 |
| FokI | GGATG | 3 cut(s) | 100, 1100, 1382 |
| Fsp4HI | GCNGC | 2 cut(s) | 987, 1185 |
| FspBI | CTAG | 2 cut(s) | 1416, 1485 |
| GlaI | GCGC | 1 cut(s) | 787 |
| GluI | GCNGC | 2 cut(s) | 987, 1185 |
| GsuI | CTGGAG | 1 cut(s) | 389 |
| HaeIII | GGCC | 3 cut(s) | 880, 1109, 1405 |
| HapII | CCGG | 1 cut(s) | 1213 |
| HgaI | GACGC | 1 cut(s) | 1460 |
| HhaI | GCGC | 1 cut(s) | 788 |
| Hin1I | GRCGYC | 2 cut(s) | 1139, 1452 |
| Hin1II | CATG | 7 cut(s) | 665, 811, 856, 1071, 1193, 1279, 1403 |
| Hin6I | GCGC | 1 cut(s) | 786 |
| HinP1I | GCGC | 1 cut(s) | 786 |
| HindIII | AAGCTT | 2 cut(s) | 202, 350 |
| HinfI | GANTC | 6 cut(s) | 319, 429, 544, 824, 930, 1361 |
| HpaII | CCGG | 1 cut(s) | 1213 |
| HphI | GGTGA | 3 cut(s) | 223, 292, 683 |
| Hpy166II | GTNNAC | 1 cut(s) | 772 |
| Hpy188I | TCNGA | 3 cut(s) | 57, 912, 1431 |
| Hpy188III | TCNNGA | 9 cut(s) | 61, 331, 368, 397, 410, 497, 655, 975, 1282 |
| Hpy8I | GTNNAC | 1 cut(s) | 772 |
| Hpy99I | CGWCG | 1 cut(s) | 1361 |
| HpyAV | CCTTC | 3 cut(s) | 508, 698, 1043 |
| HpyCH4III | ACNGT | 4 cut(s) | 583, 1010, 1198, 1357 |
| HpyCH4IV | ACGT | 1 cut(s) | 1139 |
| HpyCH4V | TGCA | 9 cut(s) | 45, 473, 485, 606, 695, 1071, 1093, 1275, 1388 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 210, 692, 792, 1184, 1239, 1248 |
| HpyF3I | CTNAG | 4 cut(s) | 843, 890, 1407, 1422 |
| HpySE526I | ACGT | 1 cut(s) | 1139 |
| Hsp92I | GRCGYC | 2 cut(s) | 1139, 1452 |
| Hsp92II | CATG | 7 cut(s) | 665, 811, 856, 1071, 1193, 1279, 1403 |
| HspAI | GCGC | 1 cut(s) | 786 |
| Ksp22I | TGATCA | 1 cut(s) | 673 |
| Lsp1109I | GCAGC | 2 cut(s) | 973, 1196 |
| LweI | GCATC | 3 cut(s) | 403, 682, 1349 |
| MaeI | CTAG | 2 cut(s) | 1416, 1485 |
| MaeII | ACGT | 1 cut(s) | 1139 |
| MaeIII | GTNAC | 7 cut(s) | 82, 280, 430, 1097, 1198, 1279, 1411 |
| MboII | GAAGA | 6 cut(s) | 766, 925, 934, 939, 1381, 1451 |
| MfeI | CAATTG | 2 cut(s) | 291, 435 |
| MflI | RGATCY | 3 cut(s) | 399, 1121, 1381 |
| MhlI | GDGCHC | 1 cut(s) | 1157 |
| MlsI | TGGCCA | 1 cut(s) | 880 |
| MluNI | TGGCCA | 1 cut(s) | 880 |
| MlyI | GAGTC | 4 cut(s) | 313, 438, 553, 833 |
| MmeI | TCCRAC | 2 cut(s) | 354, 614 |
| Mox20I | TGGCCA | 1 cut(s) | 880 |
| MroXI | GAANNNNTTC | 1 cut(s) | 518 |
| MscI | TGGCCA | 1 cut(s) | 880 |
| MseI | TTAA | 6 cut(s) | 27, 342, 405, 459, 572, 720 |
| Msp20I | TGGCCA | 1 cut(s) | 880 |
| MspCI | CTTAAG | 1 cut(s) | 458 |
| MspI | CCGG | 1 cut(s) | 1213 |
| MspR9I | CCNGG | 3 cut(s) | 630, 711, 947 |
| MunI | CAATTG | 2 cut(s) | 291, 435 |
| MvaI | CCWGG | 3 cut(s) | 630, 711, 947 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 210, 692, 792, 1184, 1239, 1248 |
| NcoI | CCATGG | 2 cut(s) | 1189, 1399 |
| NlaIII | CATG | 7 cut(s) | 665, 811, 856, 1071, 1193, 1279, 1403 |
| NlaIV | GGNNCC | 3 cut(s) | 401, 745, 1354 |
| NmuCI | GTSAC | 6 cut(s) | 82, 280, 430, 1097, 1279, 1411 |
| NspI | RCATGY | 2 cut(s) | 665, 1071 |
| PaeI | GCATGC | 1 cut(s) | 1071 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 78 |
| PdmI | GAANNNNTTC | 1 cut(s) | 518 |
| PfeI | GAWTC | 2 cut(s) | 930, 1361 |
| PflFI | GACNNNGTC | 1 cut(s) | 428 |
| PfoI | TCCNGGA | 1 cut(s) | 945 |
| PkrI | GCNGC | 2 cut(s) | 988, 1186 |
| PleI | GAGTC | 4 cut(s) | 313, 437, 552, 832 |
| PpsI | GAGTC | 4 cut(s) | 313, 437, 552, 832 |
| PpuMI | RGGWCCY | 1 cut(s) | 707 |
| Psp5II | RGGWCCY | 1 cut(s) | 707 |
| Psp6I | CCWGG | 3 cut(s) | 628, 709, 945 |
| PspEI | GGTNACC | 1 cut(s) | 280 |
| PspGI | CCWGG | 3 cut(s) | 628, 709, 945 |
| PspN4I | GGNNCC | 3 cut(s) | 401, 745, 1354 |
| PspPI | GGNCC | 4 cut(s) | 707, 744, 1108, 1403 |
| PspPPI | RGGWCCY | 1 cut(s) | 707 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 848, 880 |
| PstI | CTGCAG | 1 cut(s) | 608 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1429 |
| PsuI | RGATCY | 3 cut(s) | 399, 1121, 1381 |
| PsyI | GACNNNGTC | 1 cut(s) | 428 |
| RsaI | GTAC | 6 cut(s) | 386, 464, 580, 680, 735, 1195 |
| RsaNI | GTAC | 6 cut(s) | 385, 463, 579, 679, 734, 1194 |
| SaqAI | TTAA | 6 cut(s) | 27, 342, 405, 459, 572, 720 |
| SatI | GCNGC | 2 cut(s) | 987, 1185 |
| Sau96I | GGNCC | 4 cut(s) | 707, 744, 1108, 1403 |
| ScaI | AGTACT | 1 cut(s) | 386 |
| SchI | GAGTC | 4 cut(s) | 313, 438, 553, 833 |
| ScrFI | CCNGG | 3 cut(s) | 630, 711, 947 |
| SduI | GDGCHC | 1 cut(s) | 1157 |
| SfaNI | GCATC | 3 cut(s) | 403, 682, 1349 |
| SfcI | CTRYAG | 1 cut(s) | 604 |
| SinI | GGWCC | 2 cut(s) | 707, 744 |
| SmlI | CTYRAG | 1 cut(s) | 458 |
| SmoI | CTYRAG | 1 cut(s) | 458 |
| SphI | GCATGC | 1 cut(s) | 1071 |
| SsiI | CCGC | 2 cut(s) | 989, 1204 |
| SspMI | CTAG | 2 cut(s) | 1416, 1485 |
| StyD4I | CCNGG | 3 cut(s) | 628, 709, 945 |
| StyI | CCWWGG | 4 cut(s) | 1111, 1189, 1377, 1399 |
| TaaI | ACNGT | 4 cut(s) | 583, 1010, 1198, 1357 |
| TaiI | ACGT | 1 cut(s) | 1142 |
| TaqI | TCGA | 6 cut(s) | 60, 267, 297, 1218, 1266, 1359 |
| TatI | WGTACW | 2 cut(s) | 384, 462 |
| TfiI | GAWTC | 2 cut(s) | 930, 1361 |
| Tru1I | TTAA | 6 cut(s) | 27, 342, 405, 459, 572, 720 |
| Tru9I | TTAA | 6 cut(s) | 27, 342, 405, 459, 572, 720 |
| TscAI | CASTG | 1 cut(s) | 865 |
| TseFI | GTSAC | 6 cut(s) | 82, 280, 430, 1097, 1279, 1411 |
| TseI | GCWGC | 2 cut(s) | 986, 1184 |
| Tsp45I | GTSAC | 6 cut(s) | 82, 280, 430, 1097, 1279, 1411 |
| TspDTI | ATGAA | 6 cut(s) | 102, 327, 516, 869, 972, 1017 |
| TspGWI | ACGGA | 4 cut(s) | 52, 321, 577, 821 |
| TspRI | CASTG | 1 cut(s) | 865 |
| Tth111I | GACNNNGTC | 1 cut(s) | 428 |
| Vha464I | CTTAAG | 1 cut(s) | 458 |
| VpaK11BI | GGWCC | 2 cut(s) | 707, 744 |
| XapI | RAATTY | 3 cut(s) | 149, 776, 1442 |
| XceI | RCATGY | 2 cut(s) | 665, 1071 |
| XmnI | GAANNNNTTC | 1 cut(s) | 518 |
| XspI | CTAG | 2 cut(s) | 1416, 1485 |
| ZraI | GACGTC | 1 cut(s) | 1140 |
| ZrmI | AGTACT | 1 cut(s) | 386 |