Belongs to the isocitrate and isopropylmalate dehydrogenases family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Iso_dh | PF00180 | 8 - 403 | 1.8e-79 | Isocitrate/isopropylmalate dehydrogenase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 306 |
| AciI | CCGC | 3 cut(s) | 364, 587, 949 |
| AclWI | GGATC | 4 cut(s) | 573, 711, 874, 1140 |
| AcoI | YGGCCR | 1 cut(s) | 623 |
| AcsI | RAATTY | 3 cut(s) | 69, 506, 1193 |
| AcuI | CTGAAG | 3 cut(s) | 753, 945, 1209 |
| AcyI | GRCGYC | 1 cut(s) | 1203 |
| AfaI | GTAC | 6 cut(s) | 131, 209, 325, 425, 480, 940 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 958 |
| AflII | CTTAAG | 1 cut(s) | 203 |
| AjnI | CCWGG | 3 cut(s) | 373, 690, 1058 |
| AluBI | AGCT | 8 cut(s) | 97, 197, 545, 731, 923, 1001, 1094, 1219 |
| AluI | AGCT | 8 cut(s) | 97, 197, 545, 731, 923, 1001, 1094, 1219 |
| Alw26I | GTCTC | 1 cut(s) | 1176 |
| AlwI | GGATC | 4 cut(s) | 573, 711, 874, 1140 |
| Ama87I | CYCGRG | 1 cut(s) | 455 |
| Aor13HI | TCCGGA | 1 cut(s) | 306 |
| AoxI | GGCC | 3 cut(s) | 142, 623, 1154 |
| ApeKI | GCWGC | 2 cut(s) | 929, 1091 |
| ApoI | RAATTY | 3 cut(s) | 69, 506, 1193 |
| AspS9I | GGNCC | 4 cut(s) | 452, 489, 1154, 1162 |
| AsuC2I | CCSGG | 3 cut(s) | 456, 457, 959 |
| AsuHPI | GGTGA | 4 cut(s) | 37, 428, 956, 989 |
| AvaI | CYCGRG | 1 cut(s) | 455 |
| AvaII | GGWCC | 3 cut(s) | 452, 489, 1162 |
| AxyI | CCTNAGG | 2 cut(s) | 1158, 1166 |
| BaeGI | GKGCMC | 1 cut(s) | 902 |
| BalI | TGGCCA | 1 cut(s) | 625 |
| BauI | CACGAG | 2 cut(s) | 252, 1020 |
| BbvCI | CCTCAGC | 1 cut(s) | 1212 |
| BbvI | GCAGC | 2 cut(s) | 941, 1103 |
| BccI | CCATC | 5 cut(s) | 44, 479, 662, 821, 899 |
| BceAI | ACGGC | 1 cut(s) | 1190 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 755, 789 |
| BciT130I | CCWGG | 3 cut(s) | 375, 692, 1060 |
| BclI | TGATCA | 1 cut(s) | 418 |
| BcnI | CCSGG | 3 cut(s) | 456, 457, 959 |
| BcoDI | GTCTC | 1 cut(s) | 1176 |
| BfmI | CTRYAG | 1 cut(s) | 349 |
| BfrI | CTTAAG | 1 cut(s) | 203 |
| BisI | GCNGC | 2 cut(s) | 930, 1092 |
| BlsI | GCNGC | 2 cut(s) | 931, 1093 |
| BmcAI | AGTACT | 1 cut(s) | 131 |
| Bme1390I | CCNGG | 6 cut(s) | 375, 456, 457, 692, 959, 1060 |
| Bme18I | GGWCC | 3 cut(s) | 452, 489, 1162 |
| BmeT110I | CYCGRG | 1 cut(s) | 455 |
| BmgT120I | GGNCC | 4 cut(s) | 452, 489, 1154, 1162 |
| BmiI | GGNNCC | 2 cut(s) | 454, 490 |
| BmrFI | CCNGG | 6 cut(s) | 375, 456, 457, 692, 959, 1060 |
| BmsI | GCATC | 3 cut(s) | 148, 427, 602 |
| BpmI | CTGGAG | 1 cut(s) | 555 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1212 |
| BpuEI | CTTGAG | 1 cut(s) | 641 |
| BpuMI | CCSGG | 3 cut(s) | 456, 457, 959 |
| BsaHI | GRCGYC | 1 cut(s) | 1203 |
| BsaI | GGTCTC | 1 cut(s) | 1176 |
| BsaJI | CCNNGG | 6 cut(s) | 139, 455, 934, 1128, 1150, 1206 |
| BsaWI | WCCGGW | 1 cut(s) | 306 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 223, 253, 789, 819 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 958 |
| Bse1I | ACTGG | 4 cut(s) | 123, 165, 532, 897 |
| Bse21I | CCTNAGG | 2 cut(s) | 1158, 1166 |
| Bse3DI | GCAATG | 1 cut(s) | 1060 |
| BseAI | TCCGGA | 1 cut(s) | 306 |
| BseBI | CCWGG | 3 cut(s) | 375, 692, 1060 |
| BseDI | CCNNGG | 6 cut(s) | 139, 455, 934, 1128, 1150, 1206 |
| BseGI | GGATG | 2 cut(s) | 55, 838 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 958 |
| BseMI | GCAATG | 1 cut(s) | 1060 |
| BseMII | CTCAG | 3 cut(s) | 1187, 1203, 1211 |
| BseNI | ACTGG | 4 cut(s) | 123, 165, 532, 897 |
| BseRI | GAGGAG | 2 cut(s) | 301, 1229 |
| BseSI | GKGCMC | 1 cut(s) | 902 |
| BseXI | GCAGC | 2 cut(s) | 941, 1103 |
| BsgI | GTGCAG | 1 cut(s) | 210 |
| BshFI | GGCC | 3 cut(s) | 144, 625, 1156 |
| BsiHKCI | CYCGRG | 1 cut(s) | 455 |
| BsiSI | CCGG | 3 cut(s) | 307, 456, 958 |
| BslFI | GGGAC | 1 cut(s) | 313 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 958 |
| BsmAI | GTCTC | 1 cut(s) | 1176 |
| BsmFI | GGGAC | 1 cut(s) | 313 |
| BsmI | GAATGC | 1 cut(s) | 8 |
| BsnI | GGCC | 3 cut(s) | 144, 625, 1156 |
| Bso31I | GGTCTC | 1 cut(s) | 1176 |
| BsoBI | CYCGRG | 1 cut(s) | 455 |
| Bsp1286I | GDGCHC | 1 cut(s) | 902 |
| Bsp13I | TCCGGA | 1 cut(s) | 306 |
| Bsp143I | GATC | 6 cut(s) | 18, 418, 578, 716, 866, 1132 |
| Bsp19I | CCATGG | 2 cut(s) | 934, 1150 |
| BspACI | CCGC | 3 cut(s) | 364, 587, 949 |
| BspANI | GGCC | 3 cut(s) | 144, 625, 1156 |
| BspCNI | CTCAG | 3 cut(s) | 1186, 1204, 1212 |
| BspEI | TCCGGA | 1 cut(s) | 306 |
| BspLI | GGNNCC | 2 cut(s) | 454, 490 |
| BspMAI | CTGCAG | 1 cut(s) | 353 |
| BspPI | GGATC | 4 cut(s) | 573, 711, 874, 1140 |
| BspTI | CTTAAG | 1 cut(s) | 203 |
| BspTNI | GGTCTC | 1 cut(s) | 1176 |
| BsrDI | GCAATG | 1 cut(s) | 1060 |
| BsrI | ACTGG | 4 cut(s) | 123, 165, 532, 897 |
| BssECI | CCNNGG | 6 cut(s) | 139, 455, 934, 1128, 1150, 1206 |
| BssMI | GATC | 6 cut(s) | 18, 418, 578, 716, 866, 1132 |
| BssNI | GRCGYC | 1 cut(s) | 1203 |
| BssSI | CACGAG | 2 cut(s) | 252, 1020 |
| BssT1I | CCWWGG | 4 cut(s) | 139, 934, 1128, 1150 |
| Bst2BI | CACGAG | 2 cut(s) | 252, 1020 |
| Bst2UI | CCWGG | 3 cut(s) | 375, 692, 1060 |
| Bst4CI | ACNGT | 4 cut(s) | 328, 755, 943, 1108 |
| BstACI | GRCGYC | 1 cut(s) | 1203 |
| BstAFI | CTTAAG | 1 cut(s) | 203 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 437 |
| BstC8I | GCNNGC | 2 cut(s) | 408, 814 |
| BstDEI | CTNAG | 7 cut(s) | 635, 847, 1158, 1166, 1173, 1212, 1220 |
| BstDSI | CCRYGG | 3 cut(s) | 934, 1150, 1206 |
| BstEII | GGTNACC | 1 cut(s) | 25 |
| BstF5I | GGATG | 2 cut(s) | 55, 838 |
| BstKTI | GATC | 6 cut(s) | 21, 421, 581, 719, 869, 1135 |
| BstMAI | GTCTC | 1 cut(s) | 1176 |
| BstMBI | GATC | 6 cut(s) | 18, 418, 578, 716, 866, 1132 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 103, 437, 929, 993, 1037 |
| BstNI | CCWGG | 3 cut(s) | 375, 692, 1060 |
| BstNSI | RCATGY | 2 cut(s) | 410, 816 |
| BstPI | GGTNACC | 1 cut(s) | 25 |
| BstSCI | CCNGG | 6 cut(s) | 373, 454, 455, 690, 957, 1058 |
| BstSFI | CTRYAG | 1 cut(s) | 349 |
| BstSLI | GKGCMC | 1 cut(s) | 902 |
| BstV1I | GCAGC | 2 cut(s) | 941, 1103 |
| BstX2I | RGATCY | 3 cut(s) | 716, 866, 1132 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1066 |
| BstYI | RGATCY | 3 cut(s) | 716, 866, 1132 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1158, 1166 |
| BsuRI | GGCC | 3 cut(s) | 144, 625, 1156 |
| BtgI | CCRYGG | 3 cut(s) | 934, 1150, 1206 |
| BtsCI | GGATG | 2 cut(s) | 55, 838 |
| BtsI | GCAGTG | 1 cut(s) | 603 |
| BtsIMutI | CAGTG | 3 cut(s) | 172, 561, 603 |
| Cac8I | GCNNGC | 2 cut(s) | 408, 814 |
| Cfr13I | GGNCC | 4 cut(s) | 452, 489, 1154, 1162 |
| Cfr9I | CCCGGG | 1 cut(s) | 455 |
| CseI | GACGC | 2 cut(s) | 599, 1211 |
| Csp6I | GTAC | 6 cut(s) | 130, 208, 324, 424, 479, 939 |
| CviAII | CATG | 4 cut(s) | 407, 813, 935, 1151 |
| CviQI | GTAC | 6 cut(s) | 130, 208, 324, 424, 479, 939 |
| DdeI | CTNAG | 7 cut(s) | 635, 847, 1158, 1166, 1173, 1212, 1220 |
| DpnI | GATC | 6 cut(s) | 20, 420, 580, 718, 868, 1134 |
| DpnII | GATC | 6 cut(s) | 18, 418, 578, 716, 866, 1132 |
| DraI | TTTAAA | 1 cut(s) | 318 |
| EaeI | YGGCCR | 1 cut(s) | 623 |
| Eco130I | CCWWGG | 4 cut(s) | 139, 934, 1128, 1150 |
| Eco31I | GGTCTC | 1 cut(s) | 1176 |
| Eco32I | GATATC | 1 cut(s) | 124 |
| Eco47I | GGWCC | 3 cut(s) | 452, 489, 1162 |
| Eco57I | CTGAAG | 3 cut(s) | 753, 945, 1209 |
| Eco81I | CCTNAGG | 2 cut(s) | 1158, 1166 |
| Eco88I | CYCGRG | 1 cut(s) | 455 |
| Eco91I | GGTNACC | 1 cut(s) | 25 |
| EcoO109I | RGGNCCY | 2 cut(s) | 452, 1162 |
| EcoO65I | GGTNACC | 1 cut(s) | 25 |
| EcoRII | CCWGG | 3 cut(s) | 373, 690, 1058 |
| EcoRV | GATATC | 1 cut(s) | 124 |
| EcoT14I | CCWWGG | 4 cut(s) | 139, 934, 1128, 1150 |
| ErhI | CCWWGG | 4 cut(s) | 139, 934, 1128, 1150 |
| FaeI | CATG | 4 cut(s) | 410, 816, 938, 1154 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 81, 113, 186, 218, 671, 703 |
| FaqI | GGGAC | 1 cut(s) | 313 |
| FatI | CATG | 4 cut(s) | 406, 812, 934, 1150 |
| FauI | CCCGC | 2 cut(s) | 371, 956 |
| FauNDI | CATATG | 1 cut(s) | 778 |
| FbaI | TGATCA | 1 cut(s) | 418 |
| Fnu4HI | GCNGC | 2 cut(s) | 930, 1092 |
| FokI | GGATG | 2 cut(s) | 62, 845 |
| Fsp4HI | GCNGC | 2 cut(s) | 930, 1092 |
| GluI | GCNGC | 2 cut(s) | 930, 1092 |
| GsuI | CTGGAG | 1 cut(s) | 555 |
| HaeIII | GGCC | 3 cut(s) | 144, 625, 1156 |
| HapII | CCGG | 3 cut(s) | 307, 456, 958 |
| HgaI | GACGC | 2 cut(s) | 599, 1211 |
| Hin1I | GRCGYC | 1 cut(s) | 1203 |
| Hin1II | CATG | 4 cut(s) | 410, 816, 938, 1154 |
| HindIII | AAGCTT | 1 cut(s) | 95 |
| HinfI | GANTC | 6 cut(s) | 64, 174, 289, 569, 675, 1112 |
| HpaII | CCGG | 3 cut(s) | 307, 456, 958 |
| HphI | GGTGA | 4 cut(s) | 37, 428, 956, 989 |
| Hpy166II | GTNNAC | 1 cut(s) | 964 |
| Hpy188I | TCNGA | 2 cut(s) | 578, 879 |
| Hpy188III | TCNNGA | 8 cut(s) | 76, 113, 155, 242, 307, 658, 720, 1020 |
| Hpy8I | GTNNAC | 1 cut(s) | 964 |
| HpyAV | CCTTC | 2 cut(s) | 728, 788 |
| HpyCH4III | ACNGT | 4 cut(s) | 328, 755, 943, 1108 |
| HpyCH4V | TGCA | 9 cut(s) | 191, 230, 351, 396, 440, 776, 816, 838, 1031 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 103, 437, 929, 993, 1037 |
| HpyF3I | CTNAG | 7 cut(s) | 635, 847, 1158, 1166, 1173, 1212, 1220 |
| Hsp92I | GRCGYC | 1 cut(s) | 1203 |
| Hsp92II | CATG | 4 cut(s) | 410, 816, 938, 1154 |
| Kpn2I | TCCGGA | 1 cut(s) | 306 |
| Ksp22I | TGATCA | 1 cut(s) | 418 |
| Kzo9I | GATC | 6 cut(s) | 18, 418, 578, 716, 866, 1132 |
| LmnI | GCTCC | 1 cut(s) | 1216 |
| Lsp1109I | GCAGC | 2 cut(s) | 941, 1103 |
| LweI | GCATC | 3 cut(s) | 148, 427, 602 |
| MaeIII | GTNAC | 5 cut(s) | 25, 175, 842, 943, 1017 |
| MalI | GATC | 6 cut(s) | 20, 420, 580, 718, 868, 1134 |
| MboI | GATC | 6 cut(s) | 18, 418, 578, 716, 866, 1132 |
| MboII | GAAGA | 4 cut(s) | 679, 684, 1132, 1202 |
| MfeI | CAATTG | 2 cut(s) | 36, 180 |
| MflI | RGATCY | 3 cut(s) | 716, 866, 1132 |
| MhlI | GDGCHC | 1 cut(s) | 902 |
| MlsI | TGGCCA | 1 cut(s) | 625 |
| MluCI | AATT | 7 cut(s) | 36, 69, 180, 390, 467, 506, 1193 |
| MluNI | TGGCCA | 1 cut(s) | 625 |
| MlyI | GAGTC | 4 cut(s) | 58, 183, 298, 578 |
| MmeI | TCCRAC | 3 cut(s) | 359, 1026, 1081 |
| MnlI | CCTC | 9 cut(s) | 155, 279, 396, 505, 530, 791, 968, 1016, 1207 |
| Mox20I | TGGCCA | 1 cut(s) | 625 |
| MroI | TCCGGA | 1 cut(s) | 306 |
| MscI | TGGCCA | 1 cut(s) | 625 |
| MseI | TTAA | 5 cut(s) | 204, 258, 317, 465, 786 |
| Msp20I | TGGCCA | 1 cut(s) | 625 |
| MspCI | CTTAAG | 1 cut(s) | 203 |
| MspI | CCGG | 3 cut(s) | 307, 456, 958 |
| MspR9I | CCNGG | 6 cut(s) | 375, 456, 457, 692, 959, 1060 |
| MunI | CAATTG | 2 cut(s) | 36, 180 |
| Mva1269I | GAATGC | 1 cut(s) | 8 |
| MvaI | CCWGG | 3 cut(s) | 375, 692, 1060 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 103, 437, 929, 993, 1037 |
| NciI | CCSGG | 3 cut(s) | 456, 457, 959 |
| NcoI | CCATGG | 2 cut(s) | 934, 1150 |
| NdeI | CATATG | 1 cut(s) | 778 |
| NdeII | GATC | 6 cut(s) | 18, 418, 578, 716, 866, 1132 |
| NlaIII | CATG | 4 cut(s) | 410, 816, 938, 1154 |
| NlaIV | GGNNCC | 2 cut(s) | 454, 490 |
| NmuCI | GTSAC | 4 cut(s) | 25, 175, 842, 1017 |
| NspI | RCATGY | 2 cut(s) | 410, 816 |
| PaeI | GCATGC | 2 cut(s) | 410, 816 |
| PctI | GAATGC | 1 cut(s) | 8 |
| PfeI | GAWTC | 2 cut(s) | 675, 1112 |
| PfoI | TCCNGGA | 1 cut(s) | 690 |
| PkrI | GCNGC | 2 cut(s) | 931, 1093 |
| PleI | GAGTC | 4 cut(s) | 58, 182, 297, 577 |
| PpsI | GAGTC | 4 cut(s) | 58, 182, 297, 577 |
| PpuMI | RGGWCCY | 2 cut(s) | 452, 1162 |
| Psp5II | RGGWCCY | 2 cut(s) | 452, 1162 |
| Psp6I | CCWGG | 3 cut(s) | 373, 690, 1058 |
| PspEI | GGTNACC | 1 cut(s) | 25 |
| PspGI | CCWGG | 3 cut(s) | 373, 690, 1058 |
| PspN4I | GGNNCC | 2 cut(s) | 454, 490 |
| PspPI | GGNCC | 4 cut(s) | 452, 489, 1154, 1162 |
| PspPPI | RGGWCCY | 2 cut(s) | 452, 1162 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 593, 625 |
| PstI | CTGCAG | 1 cut(s) | 353 |
| PsuI | RGATCY | 3 cut(s) | 716, 866, 1132 |
| RsaI | GTAC | 6 cut(s) | 131, 209, 325, 425, 480, 940 |
| RsaNI | GTAC | 6 cut(s) | 130, 208, 324, 424, 479, 939 |
| SaqAI | TTAA | 5 cut(s) | 204, 258, 317, 465, 786 |
| SatI | GCNGC | 2 cut(s) | 930, 1092 |
| Sau3AI | GATC | 6 cut(s) | 18, 418, 578, 716, 866, 1132 |
| Sau96I | GGNCC | 4 cut(s) | 452, 489, 1154, 1162 |
| ScaI | AGTACT | 1 cut(s) | 131 |
| SchI | GAGTC | 4 cut(s) | 58, 183, 298, 578 |
| ScrFI | CCNGG | 6 cut(s) | 375, 456, 457, 692, 959, 1060 |
| SduI | GDGCHC | 1 cut(s) | 902 |
| SfaNI | GCATC | 3 cut(s) | 148, 427, 602 |
| SfcI | CTRYAG | 1 cut(s) | 349 |
| SinI | GGWCC | 3 cut(s) | 452, 489, 1162 |
| SmaI | CCCGGG | 1 cut(s) | 457 |
| SmlI | CTYRAG | 2 cut(s) | 203, 656 |
| SmoI | CTYRAG | 2 cut(s) | 203, 656 |
| SphI | GCATGC | 2 cut(s) | 410, 816 |
| Sse9I | AATT | 7 cut(s) | 36, 69, 180, 390, 467, 506, 1193 |
| SsiI | CCGC | 3 cut(s) | 364, 587, 949 |
| StyD4I | CCNGG | 6 cut(s) | 373, 454, 455, 690, 957, 1058 |
| StyI | CCWWGG | 4 cut(s) | 139, 934, 1128, 1150 |
| TaaI | ACNGT | 4 cut(s) | 328, 755, 943, 1108 |
| TaqI | TCGA | 2 cut(s) | 42, 67 |
| TasI | AATT | 7 cut(s) | 36, 69, 180, 390, 467, 506, 1193 |
| TatI | WGTACW | 2 cut(s) | 129, 207 |
| TfiI | GAWTC | 2 cut(s) | 675, 1112 |
| Tru1I | TTAA | 5 cut(s) | 204, 258, 317, 465, 786 |
| Tru9I | TTAA | 5 cut(s) | 204, 258, 317, 465, 786 |
| TscAI | CASTG | 3 cut(s) | 172, 568, 610 |
| TseFI | GTSAC | 4 cut(s) | 25, 175, 842, 1017 |
| TseI | GCWGC | 2 cut(s) | 929, 1091 |
| Tsp45I | GTSAC | 4 cut(s) | 25, 175, 842, 1017 |
| TspDTI | ATGAA | 5 cut(s) | 72, 261, 614, 717, 762 |
| TspMI | CCCGGG | 1 cut(s) | 455 |
| TspRI | CASTG | 3 cut(s) | 172, 568, 610 |
| Vha464I | CTTAAG | 1 cut(s) | 203 |
| VpaK11BI | GGWCC | 3 cut(s) | 452, 489, 1162 |
| XapI | RAATTY | 3 cut(s) | 69, 506, 1193 |
| XceI | RCATGY | 2 cut(s) | 410, 816 |
| XmaI | CCCGGG | 1 cut(s) | 455 |
| ZrmI | AGTACT | 1 cut(s) | 131 |