RCHIOBHM_CHR0C29G0501171
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: Sequence Only
Biological Identity
rosa_chinensis
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 297 bp
ATGTTGCATTATTCAGCTCATACAGTGGTTCGGGTGCCCACTGTGCAGGTGCATTTGAATCTTATCCAAAGGGTAAATATTGCCATTGATGTAGCTAATGCTTTGGATTATTTGCACAGCCACTTTCACAACCCTATAGTTCATTGTGATTTAAAGCCGAAGTATGGCATGGGAGGTGCGGTCTCAACGTATGGGGATGTGTATAGCTACGGAATCTTGTTACTGGAGATGCTTACTGGTAAGAGGCCAACAGATGATATGTTTACAGATGACACGAACTTGCACAATTTGTTCTGA

Protein Analysis

98

Amino Acids

11.06

Weight (kDa)

6.19

Isoelectric Point (pI)

19.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 37
Acc36I ACCTGC 1 cut(s) 37
AccB1I GGYRCC 1 cut(s) 34
AciI CCGC 1 cut(s) 179
AfiI CCNNNNNNNGG 1 cut(s) 164
AgsI TTSAA 1 cut(s) 58
AluBI AGCT 3 cut(s) 17, 95, 207
AluI AGCT 3 cut(s) 17, 95, 207
Alw26I GTCTC 1 cut(s) 187
AoxI GGCC 1 cut(s) 245
BaeGI GKGCMC 1 cut(s) 39
BanI GGYRCC 1 cut(s) 34
BcoDI GTCTC 1 cut(s) 187
BfmI CTRYAG 1 cut(s) 135
BfuAI ACCTGC 1 cut(s) 37
BmiI GGNNCC 1 cut(s) 36
BmsI GCATC 1 cut(s) 219
BpmI CTGGAG 1 cut(s) 245
BsaI GGTCTC 1 cut(s) 187
BsaXI ACNNNNNCTCC 2 cut(s) 165, 195
Bsc4I CCNNNNNNNGG 1 cut(s) 164
Bse1I ACTGG 2 cut(s) 228, 241
BseGI GGATG 1 cut(s) 202
BseLI CCNNNNNNNGG 1 cut(s) 164
BseNI ACTGG 2 cut(s) 228, 241
BseSI GKGCMC 1 cut(s) 39
BsgI GTGCAG 1 cut(s) 65
BshFI GGCC 1 cut(s) 247
BshNI GGYRCC 1 cut(s) 34
BslI CCNNNNNNNGG 1 cut(s) 164
BsmAI GTCTC 1 cut(s) 187
BsnI GGCC 1 cut(s) 247
Bso31I GGTCTC 1 cut(s) 187
Bsp1286I GDGCHC 1 cut(s) 39
BspACI CCGC 1 cut(s) 179
BspANI GGCC 1 cut(s) 247
BspLI GGNNCC 1 cut(s) 36
BspMI ACCTGC 1 cut(s) 37
BspT107I GGYRCC 1 cut(s) 34
BspTNI GGTCTC 1 cut(s) 187
BsrI ACTGG 2 cut(s) 228, 241
Bst4CI ACNGT 2 cut(s) 25, 43
BstF5I GGATG 1 cut(s) 202
BstMAI GTCTC 1 cut(s) 187
BstMWI GCNNNNNNNGC 1 cut(s) 43
BstSFI CTRYAG 1 cut(s) 135
BstSLI GKGCMC 1 cut(s) 39
BsuRI GGCC 1 cut(s) 247
BtsCI GGATG 1 cut(s) 202
BtsIMutI CAGTG 2 cut(s) 30, 39
BveI ACCTGC 1 cut(s) 37
CviAII CATG 1 cut(s) 169
CviJI RGCY 6 cut(s) 17, 95, 120, 157, 207, 247
CviKI_1 RGCY 6 cut(s) 17, 95, 120, 157, 207, 247
DraI TTTAAA 1 cut(s) 153
Eco31I GGTCTC 1 cut(s) 187
FaeI CATG 1 cut(s) 172
FaiI YATR 7 cut(s) 21, 137, 165, 170, 192, 204, 260
FatI CATG 1 cut(s) 168
FokI GGATG 1 cut(s) 209
GsuI CTGGAG 1 cut(s) 245
HaeIII GGCC 1 cut(s) 247
Hin1II CATG 1 cut(s) 172
HinfI GANTC 2 cut(s) 58, 213
Hpy166II GTNNAC 1 cut(s) 264
Hpy188I TCNGA 1 cut(s) 296
Hpy8I GTNNAC 1 cut(s) 264
HpyCH4III ACNGT 2 cut(s) 25, 43
HpyCH4IV ACGT 1 cut(s) 188
HpyCH4V TGCA 5 cut(s) 7, 46, 52, 115, 283
HpyF10VI GCNNNNNNNGC 1 cut(s) 43
HpySE526I ACGT 1 cut(s) 188
Hsp92II CATG 1 cut(s) 172
LpnPI CCDG 3 cut(s) 32, 209, 222
LweI GCATC 1 cut(s) 219
MaeII ACGT 1 cut(s) 188
MaeIII GTNAC 1 cut(s) 219
MhlI GDGCHC 1 cut(s) 39
MluCI AATT 1 cut(s) 286
MnlI CCTC 2 cut(s) 167, 237
MseI TTAA 1 cut(s) 152
MwoI GCNNNNNNNGC 1 cut(s) 43
NlaIII CATG 1 cut(s) 172
NlaIV GGNNCC 1 cut(s) 36
PaqCI CACCTGC 1 cut(s) 37
PfeI GAWTC 2 cut(s) 58, 213
PspN4I GGNNCC 1 cut(s) 36
SaqAI TTAA 1 cut(s) 152
SduI GDGCHC 1 cut(s) 39
SetI ASST 6 cut(s) 19, 51, 97, 178, 191, 209
SfaNI GCATC 1 cut(s) 219
SfcI CTRYAG 1 cut(s) 135
SgeI CNNG 8 cut(s) 44, 59, 181, 229, 236, 249, 286, 292
Sse9I AATT 1 cut(s) 286
SsiI CCGC 1 cut(s) 179
SspI AATATT 1 cut(s) 79
TaaI ACNGT 2 cut(s) 25, 43
TaiI ACGT 1 cut(s) 191
TasI AATT 1 cut(s) 286
TfiI GAWTC 2 cut(s) 58, 213
Tru1I TTAA 1 cut(s) 152
Tru9I TTAA 1 cut(s) 152
TscAI CASTG 2 cut(s) 30, 46
TspDTI ATGAA 1 cut(s) 131
TspGWI ACGGA 1 cut(s) 225
TspRI CASTG 2 cut(s) 30, 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.