RchiOBHm_Chr7g0200211
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
18058504 .. 18062368
3865 bp
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UTR
Exon/CDS
Intron
PRQ17918

Sequence Viewer

Length: 258 bp
ATGGAAATGGTGAAGCATTATATCCCAAACCATCACTGTACATGCCGTGGAAAACTGAATTTATCTCAAAGAAAGACTTGGCAAGAGTGTAGCTGGAAGTATCAAAGAGTAAGTTCAGAGTATAGCATAGGAATGGAGGTGTCAACAAGTGGCGACATCTATAGCTATGAAATCCTGCTATTTGAGATGTTGATAGGCAAAAGATTGACAGATGACATGTTTAAAGACGGCCTGAACCTGCATAAATTGGTCAGATAA

Protein Analysis

85

Amino Acids

10.12

Weight (kDa)

8.48

Isoelectric Point (pI)

34.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 246
AcsI RAATTY 1 cut(s) 58
AfaI GTAC 1 cut(s) 40
AflIII ACRYGT 1 cut(s) 216
AluBI AGCT 2 cut(s) 93, 165
AluI AGCT 2 cut(s) 93, 165
AoxI GGCC 1 cut(s) 229
ApoI RAATTY 1 cut(s) 58
AsuHPI GGTGA 1 cut(s) 22
BccI CCATC 1 cut(s) 39
BceAI ACGGC 2 cut(s) 30, 244
BfmI CTRYAG 1 cut(s) 160
BfuAI ACCTGC 1 cut(s) 246
BsaJI CCNNGG 1 cut(s) 46
BseDI CCNNGG 1 cut(s) 46
BshFI GGCC 1 cut(s) 231
BsnI GGCC 1 cut(s) 231
Bsp1407I TGTACA 1 cut(s) 38
BspANI GGCC 1 cut(s) 231
BspMI ACCTGC 1 cut(s) 246
BsrGI TGTACA 1 cut(s) 38
BssECI CCNNGG 1 cut(s) 46
Bst4CI ACNGT 1 cut(s) 38
BstAUI TGTACA 1 cut(s) 38
BstDSI CCRYGG 1 cut(s) 46
BstNSI RCATGY 2 cut(s) 45, 220
BstSFI CTRYAG 1 cut(s) 160
BsuRI GGCC 1 cut(s) 231
BtgI CCRYGG 1 cut(s) 46
BtsIMutI CAGTG 1 cut(s) 34
BveI ACCTGC 1 cut(s) 246
Csp6I GTAC 1 cut(s) 39
CviAII CATG 2 cut(s) 42, 217
CviJI RGCY 3 cut(s) 93, 165, 231
CviKI_1 RGCY 3 cut(s) 93, 165, 231
CviQI GTAC 1 cut(s) 39
DraI TTTAAA 1 cut(s) 223
FaeI CATG 2 cut(s) 45, 220
FaiI YATR 8 cut(s) 21, 43, 123, 128, 162, 168, 218, 243
FalI AAGNNNNNCTT 2 cut(s) 61, 93
FatI CATG 2 cut(s) 41, 216
HaeIII GGCC 1 cut(s) 231
Hin1II CATG 2 cut(s) 45, 220
HincII GTYRAC 1 cut(s) 144
HindII GTYRAC 1 cut(s) 144
HphI GGTGA 1 cut(s) 22
Hpy166II GTNNAC 1 cut(s) 144
Hpy188I TCNGA 2 cut(s) 118, 254
Hpy8I GTNNAC 1 cut(s) 144
HpyCH4III ACNGT 1 cut(s) 38
HpyCH4V TGCA 1 cut(s) 241
Hsp92II CATG 2 cut(s) 45, 220
LpnPI CCDG 4 cut(s) 79, 188, 245, 251
MluCI AATT 2 cut(s) 58, 245
MnlI CCTC 1 cut(s) 130
MseI TTAA 1 cut(s) 222
MslI CAYNNNNRTG 1 cut(s) 131
NlaIII CATG 2 cut(s) 45, 220
NspI RCATGY 2 cut(s) 45, 220
PciI ACATGT 1 cut(s) 216
PscI ACATGT 1 cut(s) 216
RsaI GTAC 1 cut(s) 40
RsaNI GTAC 1 cut(s) 39
RseI CAYNNNNRTG 1 cut(s) 131
SaqAI TTAA 1 cut(s) 222
SetI ASST 4 cut(s) 95, 141, 167, 240
SfcI CTRYAG 1 cut(s) 160
SmiMI CAYNNNNRTG 1 cut(s) 131
Sse9I AATT 2 cut(s) 58, 245
TaaI ACNGT 1 cut(s) 38
TasI AATT 2 cut(s) 58, 245
TatI WGTACW 1 cut(s) 38
Tru1I TTAA 1 cut(s) 222
Tru9I TTAA 1 cut(s) 222
TscAI CASTG 1 cut(s) 41
TspDTI ATGAA 1 cut(s) 183
TspRI CASTG 1 cut(s) 41
XapI RAATTY 1 cut(s) 58
XceI RCATGY 2 cut(s) 45, 220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.