UPF0481 protein At3g47200-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF247 | PF03140 | 52 - 396 | 1.7e-70 | Plant protein of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 554, 835 |
| AccI | GTMKAC | 2 cut(s) | 531, 1096 |
| AccII | CGCG | 5 cut(s) | 145, 199, 201, 378, 1003 |
| AccIII | TCCGGA | 1 cut(s) | 794 |
| AciI | CCGC | 6 cut(s) | 58, 378, 1003, 1247, 1252, 1286 |
| AclWI | GGATC | 2 cut(s) | 398, 706 |
| AcoI | YGGCCR | 1 cut(s) | 59 |
| AcsI | RAATTY | 2 cut(s) | 867, 1121 |
| AcuI | CTGAAG | 2 cut(s) | 297, 1004 |
| AcyI | GRCGYC | 1 cut(s) | 116 |
| AdeI | CACNNNGTG | 1 cut(s) | 55 |
| AfaI | GTAC | 4 cut(s) | 371, 626, 949, 1165 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 554, 835, 1258, 1292 |
| AflII | CTTAAG | 1 cut(s) | 17 |
| AgsI | TTSAA | 4 cut(s) | 194, 578, 766, 1090 |
| AjnI | CCWGG | 1 cut(s) | 1169 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 883, 915 |
| AluBI | AGCT | 5 cut(s) | 46, 173, 189, 270, 1233 |
| AluI | AGCT | 5 cut(s) | 46, 173, 189, 270, 1233 |
| Alw21I | GWGCWC | 2 cut(s) | 151, 175 |
| Alw26I | GTCTC | 3 cut(s) | 141, 610, 992 |
| AlwI | GGATC | 2 cut(s) | 398, 706 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 835 |
| Ama87I | CYCGRG | 1 cut(s) | 620 |
| Aor13HI | TCCGGA | 1 cut(s) | 794 |
| AoxI | GGCC | 2 cut(s) | 59, 391 |
| ApeKI | GCWGC | 2 cut(s) | 724, 1244 |
| ApoI | RAATTY | 2 cut(s) | 867, 1121 |
| AspLEI | GCGC | 2 cut(s) | 201, 378 |
| AspS9I | GGNCC | 3 cut(s) | 24, 392, 1249 |
| AsuHPI | GGTGA | 2 cut(s) | 1037, 1073 |
| AvaI | CYCGRG | 1 cut(s) | 620 |
| AvaII | GGWCC | 2 cut(s) | 24, 1249 |
| AxyI | CCTNAGG | 1 cut(s) | 717 |
| BanII | GRGCYC | 1 cut(s) | 175 |
| BbsI | GAAGAC | 1 cut(s) | 198 |
| Bbv12I | GWGCWC | 2 cut(s) | 151, 175 |
| BbvI | GCAGC | 2 cut(s) | 736, 1256 |
| BccI | CCATC | 3 cut(s) | 148, 323, 1297 |
| BceAI | ACGGC | 4 cut(s) | 46, 458, 1239, 1239 |
| BciT130I | CCWGG | 1 cut(s) | 1171 |
| BclI | TGATCA | 1 cut(s) | 295 |
| BcoDI | GTCTC | 3 cut(s) | 141, 610, 992 |
| BfaI | CTAG | 3 cut(s) | 308, 413, 1100 |
| BfmI | CTRYAG | 3 cut(s) | 79, 120, 1242 |
| BfrI | CTTAAG | 1 cut(s) | 17 |
| BglII | AGATCT | 1 cut(s) | 436 |
| BisI | GCNGC | 4 cut(s) | 59, 725, 1245, 1286 |
| BlsI | GCNGC | 4 cut(s) | 60, 726, 1246, 1287 |
| Bme1390I | CCNGG | 1 cut(s) | 1171 |
| Bme18I | GGWCC | 2 cut(s) | 24, 1249 |
| BmeT110I | CYCGRG | 1 cut(s) | 620 |
| BmgT120I | GGNCC | 3 cut(s) | 24, 392, 1249 |
| BmiI | GGNNCC | 2 cut(s) | 817, 914 |
| BmrFI | CCNGG | 1 cut(s) | 1171 |
| BmsI | GCATC | 2 cut(s) | 84, 493 |
| BpiI | GAAGAC | 1 cut(s) | 198 |
| BpmI | CTGGAG | 1 cut(s) | 802 |
| BpuEI | CTTGAG | 4 cut(s) | 91, 482, 575, 1175 |
| Bsa29I | ATCGAT | 1 cut(s) | 993 |
| BsaAI | YACGTR | 1 cut(s) | 373 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1011 |
| BsaHI | GRCGYC | 1 cut(s) | 116 |
| BsaI | GGTCTC | 1 cut(s) | 610 |
| BsaJI | CCNNGG | 2 cut(s) | 27, 62 |
| BsaWI | WCCGGW | 1 cut(s) | 794 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 554, 835, 1258, 1292 |
| Bse1I | ACTGG | 2 cut(s) | 829, 1055 |
| Bse21I | CCTNAGG | 1 cut(s) | 717 |
| Bse3DI | GCAATG | 2 cut(s) | 455, 938 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1011 |
| BseAI | TCCGGA | 1 cut(s) | 794 |
| BseBI | CCWGG | 1 cut(s) | 1171 |
| BseCI | ATCGAT | 1 cut(s) | 993 |
| BseDI | CCNNGG | 2 cut(s) | 27, 62 |
| BseGI | GGATG | 2 cut(s) | 432, 1166 |
| BseJI | GATNNNNATC | 1 cut(s) | 1011 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 554, 835, 1258, 1292 |
| BseMI | GCAATG | 2 cut(s) | 455, 938 |
| BseMII | CTCAG | 2 cut(s) | 708, 1172 |
| BseNI | ACTGG | 2 cut(s) | 829, 1055 |
| BseRI | GAGGAG | 1 cut(s) | 734 |
| BseX3I | CGGCCG | 1 cut(s) | 59 |
| BseXI | GCAGC | 2 cut(s) | 736, 1256 |
| Bsh1236I | CGCG | 5 cut(s) | 145, 199, 201, 378, 1003 |
| Bsh1285I | CGRYCG | 1 cut(s) | 62 |
| BshFI | GGCC | 2 cut(s) | 61, 393 |
| BshVI | ATCGAT | 1 cut(s) | 993 |
| BsiEI | CGRYCG | 1 cut(s) | 62 |
| BsiHKAI | GWGCWC | 2 cut(s) | 151, 175 |
| BsiHKCI | CYCGRG | 1 cut(s) | 620 |
| BsiSI | CCGG | 1 cut(s) | 795 |
| BslFI | GGGAC | 1 cut(s) | 904 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 554, 835, 1258, 1292 |
| BsmAI | GTCTC | 3 cut(s) | 141, 610, 992 |
| BsmFI | GGGAC | 1 cut(s) | 904 |
| BsmI | GAATGC | 1 cut(s) | 218 |
| BsnI | GGCC | 2 cut(s) | 61, 393 |
| Bso31I | GGTCTC | 1 cut(s) | 610 |
| BsoBI | CYCGRG | 1 cut(s) | 620 |
| Bsp1286I | GDGCHC | 2 cut(s) | 151, 175 |
| Bsp13I | TCCGGA | 1 cut(s) | 794 |
| Bsp1407I | TGTACA | 1 cut(s) | 1163 |
| Bsp143I | GATC | 5 cut(s) | 295, 403, 436, 448, 711 |
| Bsp68I | TCGCGA | 1 cut(s) | 145 |
| BspACI | CCGC | 6 cut(s) | 58, 378, 1003, 1247, 1252, 1286 |
| BspANI | GGCC | 2 cut(s) | 61, 393 |
| BspCNI | CTCAG | 2 cut(s) | 709, 1173 |
| BspDI | ATCGAT | 1 cut(s) | 993 |
| BspEI | TCCGGA | 1 cut(s) | 794 |
| BspFNI | CGCG | 5 cut(s) | 145, 199, 201, 378, 1003 |
| BspHI | TCATGA | 1 cut(s) | 978 |
| BspLI | GGNNCC | 2 cut(s) | 817, 914 |
| BspMAI | CTGCAG | 1 cut(s) | 1246 |
| BspPI | GGATC | 2 cut(s) | 398, 706 |
| BspQI | GCTCTTC | 1 cut(s) | 570 |
| BspTI | CTTAAG | 1 cut(s) | 17 |
| BspTNI | GGTCTC | 1 cut(s) | 610 |
| BsrDI | GCAATG | 2 cut(s) | 455, 938 |
| BsrGI | TGTACA | 1 cut(s) | 1163 |
| BsrI | ACTGG | 2 cut(s) | 829, 1055 |
| BssECI | CCNNGG | 2 cut(s) | 27, 62 |
| BssMI | GATC | 5 cut(s) | 295, 403, 436, 448, 711 |
| BssNAI | GTATAC | 1 cut(s) | 1097 |
| BssNI | GRCGYC | 1 cut(s) | 116 |
| Bst1107I | GTATAC | 1 cut(s) | 1097 |
| Bst2UI | CCWGG | 1 cut(s) | 1171 |
| Bst4CI | ACNGT | 2 cut(s) | 879, 1163 |
| Bst6I | CTCTTC | 2 cut(s) | 570, 977 |
| BstACI | GRCGYC | 1 cut(s) | 116 |
| BstAFI | CTTAAG | 1 cut(s) | 17 |
| BstAUI | TGTACA | 1 cut(s) | 1163 |
| BstBAI | YACGTR | 1 cut(s) | 373 |
| BstC8I | GCNNGC | 2 cut(s) | 147, 973 |
| BstDEI | CTNAG | 4 cut(s) | 717, 731, 941, 1181 |
| BstDSI | CCRYGG | 2 cut(s) | 27, 62 |
| BstF5I | GGATG | 2 cut(s) | 432, 1166 |
| BstFNI | CGCG | 5 cut(s) | 145, 199, 201, 378, 1003 |
| BstHHI | GCGC | 2 cut(s) | 201, 378 |
| BstKTI | GATC | 5 cut(s) | 298, 406, 439, 451, 714 |
| BstMAI | GTCTC | 3 cut(s) | 141, 610, 992 |
| BstMBI | GATC | 5 cut(s) | 295, 403, 436, 448, 711 |
| BstMCI | CGRYCG | 1 cut(s) | 62 |
| BstNI | CCWGG | 1 cut(s) | 1171 |
| BstSCI | CCNGG | 1 cut(s) | 1169 |
| BstSFI | CTRYAG | 3 cut(s) | 79, 120, 1242 |
| BstUI | CGCG | 5 cut(s) | 145, 199, 201, 378, 1003 |
| BstV1I | GCAGC | 2 cut(s) | 736, 1256 |
| BstV2I | GAAGAC | 1 cut(s) | 198 |
| BstX2I | RGATCY | 1 cut(s) | 436 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1055 |
| BstYI | RGATCY | 1 cut(s) | 436 |
| BstZ17I | GTATAC | 1 cut(s) | 1097 |
| BstZI | CGGCCG | 1 cut(s) | 59 |
| Bsu15I | ATCGAT | 1 cut(s) | 993 |
| Bsu36I | CCTNAGG | 1 cut(s) | 717 |
| BsuRI | GGCC | 2 cut(s) | 61, 393 |
| BsuTUI | ATCGAT | 1 cut(s) | 993 |
| BtgI | CCRYGG | 2 cut(s) | 27, 62 |
| BtgZI | GCGATG | 2 cut(s) | 126, 1158 |
| BtsCI | GGATG | 2 cut(s) | 432, 1166 |
| BtsIMutI | CAGTG | 3 cut(s) | 856, 875, 1048 |
| BtuMI | TCGCGA | 1 cut(s) | 145 |
| Cac8I | GCNNGC | 2 cut(s) | 147, 973 |
| CaiI | CAGNNNCTG | 1 cut(s) | 835 |
| CciI | TCATGA | 1 cut(s) | 978 |
| CfoI | GCGC | 2 cut(s) | 201, 378 |
| Cfr13I | GGNCC | 3 cut(s) | 24, 392, 1249 |
| ClaI | ATCGAT | 1 cut(s) | 993 |
| CpoI | CGGWCCG | 1 cut(s) | 1249 |
| CseI | GACGC | 3 cut(s) | 124, 260, 716 |
| Csp6I | GTAC | 4 cut(s) | 370, 625, 948, 1164 |
| CspI | CGGWCCG | 1 cut(s) | 1249 |
| CviAII | CATG | 5 cut(s) | 130, 217, 554, 953, 979 |
| CviQI | GTAC | 4 cut(s) | 370, 625, 948, 1164 |
| DdeI | CTNAG | 4 cut(s) | 717, 731, 941, 1181 |
| DpnI | GATC | 5 cut(s) | 297, 405, 438, 450, 713 |
| DpnII | GATC | 5 cut(s) | 295, 403, 436, 448, 711 |
| DraIII | CACNNNGTG | 1 cut(s) | 55 |
| EaeI | YGGCCR | 1 cut(s) | 59 |
| EagI | CGGCCG | 1 cut(s) | 59 |
| Eam1104I | CTCTTC | 2 cut(s) | 570, 977 |
| EarI | CTCTTC | 2 cut(s) | 570, 977 |
| EciI | GGCGGA | 1 cut(s) | 1241 |
| Ecl136II | GAGCTC | 1 cut(s) | 173 |
| EclXI | CGGCCG | 1 cut(s) | 59 |
| Eco24I | GRGCYC | 1 cut(s) | 175 |
| Eco31I | GGTCTC | 1 cut(s) | 610 |
| Eco32I | GATATC | 1 cut(s) | 643 |
| Eco47I | GGWCC | 2 cut(s) | 24, 1249 |
| Eco52I | CGGCCG | 1 cut(s) | 59 |
| Eco53kI | GAGCTC | 1 cut(s) | 173 |
| Eco57I | CTGAAG | 2 cut(s) | 297, 1004 |
| Eco81I | CCTNAGG | 1 cut(s) | 717 |
| Eco88I | CYCGRG | 1 cut(s) | 620 |
| EcoICRI | GAGCTC | 1 cut(s) | 173 |
| EcoO109I | RGGNCCY | 1 cut(s) | 392 |
| EcoRI | GAATTC | 2 cut(s) | 867, 1121 |
| EcoRII | CCWGG | 1 cut(s) | 1169 |
| EcoRV | GATATC | 1 cut(s) | 643 |
| EcoT22I | ATGCAT | 1 cut(s) | 218 |
| EcoT38I | GRGCYC | 1 cut(s) | 175 |
| FaeI | CATG | 5 cut(s) | 133, 220, 557, 956, 982 |
| FaqI | GGGAC | 1 cut(s) | 904 |
| FatI | CATG | 5 cut(s) | 129, 216, 553, 952, 978 |
| FauI | CCCGC | 2 cut(s) | 371, 996 |
| FauNDI | CATATG | 1 cut(s) | 967 |
| FbaI | TGATCA | 1 cut(s) | 295 |
| FblI | GTMKAC | 2 cut(s) | 531, 1096 |
| Fnu4HI | GCNGC | 4 cut(s) | 59, 725, 1245, 1286 |
| FokI | GGATG | 2 cut(s) | 439, 1153 |
| FriOI | GRGCYC | 1 cut(s) | 175 |
| Fsp4HI | GCNGC | 4 cut(s) | 59, 725, 1245, 1286 |
| FspBI | CTAG | 3 cut(s) | 308, 413, 1100 |
| GlaI | GCGC | 2 cut(s) | 200, 377 |
| GluI | GCNGC | 4 cut(s) | 59, 725, 1245, 1286 |
| GsuI | CTGGAG | 1 cut(s) | 802 |
| HaeIII | GGCC | 2 cut(s) | 61, 393 |
| HapII | CCGG | 1 cut(s) | 795 |
| HgaI | GACGC | 3 cut(s) | 124, 260, 716 |
| HhaI | GCGC | 2 cut(s) | 201, 378 |
| Hin1I | GRCGYC | 1 cut(s) | 116 |
| Hin1II | CATG | 5 cut(s) | 133, 220, 557, 956, 982 |
| Hin6I | GCGC | 2 cut(s) | 199, 376 |
| HinP1I | GCGC | 2 cut(s) | 199, 376 |
| HincII | GTYRAC | 1 cut(s) | 532 |
| HindII | GTYRAC | 1 cut(s) | 532 |
| HindIII | AAGCTT | 1 cut(s) | 1231 |
| HpaII | CCGG | 1 cut(s) | 795 |
| HphI | GGTGA | 2 cut(s) | 1037, 1073 |
| Hpy166II | GTNNAC | 3 cut(s) | 24, 532, 1097 |
| Hpy188I | TCNGA | 7 cut(s) | 211, 250, 403, 522, 781, 866, 1182 |
| Hpy188III | TCNNGA | 6 cut(s) | 144, 299, 413, 795, 979, 1022 |
| Hpy8I | GTNNAC | 3 cut(s) | 24, 532, 1097 |
| Hpy99I | CGWCG | 1 cut(s) | 898 |
| HpyAV | CCTTC | 2 cut(s) | 383, 848 |
| HpyCH4III | ACNGT | 2 cut(s) | 879, 1163 |
| HpyCH4IV | ACGT | 1 cut(s) | 372 |
| HpyCH4V | TGCA | 5 cut(s) | 216, 434, 649, 936, 1244 |
| HpyF3I | CTNAG | 4 cut(s) | 717, 731, 941, 1181 |
| HpySE526I | ACGT | 1 cut(s) | 372 |
| Hsp92I | GRCGYC | 1 cut(s) | 116 |
| Hsp92II | CATG | 5 cut(s) | 133, 220, 557, 956, 982 |
| HspAI | GCGC | 2 cut(s) | 199, 376 |
| Kpn2I | TCCGGA | 1 cut(s) | 794 |
| Ksp22I | TGATCA | 1 cut(s) | 295 |
| Kzo9I | GATC | 5 cut(s) | 295, 403, 436, 448, 711 |
| LguI | GCTCTTC | 1 cut(s) | 570 |
| LmnI | GCTCC | 3 cut(s) | 51, 721, 821 |
| Lsp1109I | GCAGC | 2 cut(s) | 736, 1256 |
| LweI | GCATC | 2 cut(s) | 84, 493 |
| MaeI | CTAG | 3 cut(s) | 308, 413, 1100 |
| MaeII | ACGT | 1 cut(s) | 372 |
| MaeIII | GTNAC | 2 cut(s) | 604, 958 |
| MalI | GATC | 5 cut(s) | 297, 405, 438, 450, 713 |
| MboI | GATC | 5 cut(s) | 295, 403, 436, 448, 711 |
| MboII | GAAGA | 6 cut(s) | 50, 198, 290, 557, 994, 1076 |
| MflI | RGATCY | 1 cut(s) | 436 |
| MhlI | GDGCHC | 2 cut(s) | 151, 175 |
| MluCI | AATT | 6 cut(s) | 408, 707, 766, 810, 867, 1121 |
| MlyI | GAGTC | 5 cut(s) | 212, 800, 807, 994, 1072 |
| Mph1103I | ATGCAT | 1 cut(s) | 218 |
| MroI | TCCGGA | 1 cut(s) | 794 |
| MseI | TTAA | 4 cut(s) | 18, 1263, 1271, 1306 |
| MspA1I | CMGCKG | 1 cut(s) | 1247 |
| MspCI | CTTAAG | 1 cut(s) | 17 |
| MspI | CCGG | 1 cut(s) | 795 |
| MspR9I | CCNGG | 1 cut(s) | 1171 |
| Mva1269I | GAATGC | 1 cut(s) | 218 |
| MvaI | CCWGG | 1 cut(s) | 1171 |
| MvnI | CGCG | 5 cut(s) | 145, 199, 201, 378, 1003 |
| NdeI | CATATG | 1 cut(s) | 967 |
| NdeII | GATC | 5 cut(s) | 295, 403, 436, 448, 711 |
| NlaIII | CATG | 5 cut(s) | 133, 220, 557, 956, 982 |
| NlaIV | GGNNCC | 2 cut(s) | 817, 914 |
| NruI | TCGCGA | 1 cut(s) | 145 |
| NsiI | ATGCAT | 1 cut(s) | 218 |
| PagI | TCATGA | 1 cut(s) | 978 |
| PciSI | GCTCTTC | 1 cut(s) | 570 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 175 |
| PctI | GAATGC | 1 cut(s) | 218 |
| PfeI | GAWTC | 5 cut(s) | 194, 245, 398, 762, 995 |
| PflFI | GACNNNGTC | 1 cut(s) | 98 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 554, 835 |
| PkrI | GCNGC | 4 cut(s) | 60, 726, 1246, 1287 |
| PleI | GAGTC | 5 cut(s) | 211, 799, 806, 993, 1072 |
| PpsI | GAGTC | 5 cut(s) | 211, 799, 806, 993, 1072 |
| Ppu21I | YACGTR | 1 cut(s) | 373 |
| Psp124BI | GAGCTC | 1 cut(s) | 175 |
| Psp6I | CCWGG | 1 cut(s) | 1169 |
| PspGI | CCWGG | 1 cut(s) | 1169 |
| PspN4I | GGNNCC | 2 cut(s) | 817, 914 |
| PspPI | GGNCC | 3 cut(s) | 24, 392, 1249 |
| PstI | CTGCAG | 1 cut(s) | 1246 |
| PstNI | CAGNNNCTG | 1 cut(s) | 835 |
| PsuI | RGATCY | 1 cut(s) | 436 |
| PsyI | GACNNNGTC | 1 cut(s) | 98 |
| RruI | TCGCGA | 1 cut(s) | 145 |
| RsaI | GTAC | 4 cut(s) | 371, 626, 949, 1165 |
| RsaNI | GTAC | 4 cut(s) | 370, 625, 948, 1164 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1249 |
| RsrII | CGGWCCG | 1 cut(s) | 1249 |
| SacI | GAGCTC | 1 cut(s) | 175 |
| SalI | GTCGAC | 1 cut(s) | 530 |
| SapI | GCTCTTC | 1 cut(s) | 570 |
| SaqAI | TTAA | 4 cut(s) | 18, 1263, 1271, 1306 |
| SatI | GCNGC | 4 cut(s) | 59, 725, 1245, 1286 |
| Sau3AI | GATC | 5 cut(s) | 295, 403, 436, 448, 711 |
| Sau96I | GGNCC | 3 cut(s) | 24, 392, 1249 |
| SchI | GAGTC | 5 cut(s) | 212, 800, 807, 994, 1072 |
| ScrFI | CCNGG | 1 cut(s) | 1171 |
| SduI | GDGCHC | 2 cut(s) | 151, 175 |
| SfaNI | GCATC | 2 cut(s) | 84, 493 |
| SfcI | CTRYAG | 3 cut(s) | 79, 120, 1242 |
| SinI | GGWCC | 2 cut(s) | 24, 1249 |
| SmlI | CTYRAG | 5 cut(s) | 17, 70, 461, 590, 1190 |
| SmoI | CTYRAG | 5 cut(s) | 17, 70, 461, 590, 1190 |
| Sse9I | AATT | 6 cut(s) | 408, 707, 766, 810, 867, 1121 |
| SsiI | CCGC | 6 cut(s) | 58, 378, 1003, 1247, 1252, 1286 |
| SspI | AATATT | 2 cut(s) | 1073, 1086 |
| SspMI | CTAG | 3 cut(s) | 308, 413, 1100 |
| SstI | GAGCTC | 1 cut(s) | 175 |
| StyD4I | CCNGG | 1 cut(s) | 1169 |
| TaaI | ACNGT | 2 cut(s) | 879, 1163 |
| TaiI | ACGT | 1 cut(s) | 375 |
| TaqI | TCGA | 6 cut(s) | 7, 36, 327, 531, 801, 993 |
| TasI | AATT | 6 cut(s) | 408, 707, 766, 810, 867, 1121 |
| TatI | WGTACW | 2 cut(s) | 624, 1163 |
| TauI | GCSGC | 2 cut(s) | 61, 1288 |
| TfiI | GAWTC | 5 cut(s) | 194, 245, 398, 762, 995 |
| Tru1I | TTAA | 4 cut(s) | 18, 1263, 1271, 1306 |
| Tru9I | TTAA | 4 cut(s) | 18, 1263, 1271, 1306 |
| TscAI | CASTG | 3 cut(s) | 856, 882, 1055 |
| TseI | GCWGC | 2 cut(s) | 724, 1244 |
| TspDTI | ATGAA | 9 cut(s) | 343, 891, 995, 1083, 1119, 1161, 1166, 1170, 1225 |
| TspGWI | ACGGA | 1 cut(s) | 44 |
| TspRI | CASTG | 3 cut(s) | 856, 882, 1055 |
| Tth111I | GACNNNGTC | 1 cut(s) | 98 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 554, 835 |
| Vha464I | CTTAAG | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 2 cut(s) | 24, 1249 |
| XapI | RAATTY | 2 cut(s) | 867, 1121 |
| XbaI | TCTAGA | 1 cut(s) | 412 |
| XmiI | GTMKAC | 2 cut(s) | 531, 1096 |
| XspI | CTAG | 3 cut(s) | 308, 413, 1100 |
| Zsp2I | ATGCAT | 1 cut(s) | 218 |