RLG00000024775

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000731
Physical Location & Seq
Reverse (-)
39057520 .. 39060754
3235 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024775

Sequence Viewer

Length: 1944 bp
ATGTCGCAGGGGTGTCGGCAGGGGCCTCGGCAGACGTCGGCAGCTATCGGCAGGTGTGTGCAGGGCTGTCGGCAGCCTCTCGGCAGGGGCCTCGGCAGGTGTCGGCAGGTGCTAGGCAGCTATCGGCAGGTGTTCGGCAGGTGTCGGCAGGTGCTCGGCAGGTGTCGGCAGGTGCTCGGCAGGTGTGAGCAGGTGTCGGCAGGTGCTCGGCAGGTGTCAGCAGGTGTTCGGCAGGTGTCGACAGGTCTCGGCAGGTGCTCGACAGGTGCTCGGCAGGTGTCGGCAGGTGTTCGTGAGGGCAGAACTGGTGGTGTGGTGATCGATCTAAGAGTGGATCGGTTTTGGTTTGTTGGGACTGCGTTTGTTGTTGGGGAGGTTGGGGCCCCAGTGGATTGCAACGGCGACGGAGGTGTTGGCAGATCTGATCGGATCGGTGGCGATGCTCCTGGCCTGTGCTATGGGAGTCCGATAGGTGCGGTGGAGGTGTTGTCTCTAGTGGCGGCGGCAGTATCCTCACGGACGGAAGAGAGACGGATAATTGACTTGGCTAAGGGAATCAAGGATCAATTCCGCAAATTGGATGGTACAGACTATTTCATCATCGATGGTAAATACAAAGCGGAGTTGTGTATCTATAAAGTTCCGGAGAAACTTCGAAAAGTGAAGGAGGATGCCTACATTCCCCGCGTTGTAGCAATTGGACCTTTCCATCGAGACAAAGGTGCACAAATGTCACAACATAAATTCTATTACACGAAATGCTTTCTTCACAATGGTCAAGAAGATACTGACAAATGCTTGAAGGACTGCATCCGTGCCATTCAGGGATTGGACGAAGAGATTCGTCATTGCTACAGCGGTAAGGTCGATGGTTACGAAAGTGATGAGCTGGCACAAATGATGTTAGTTGATGGCTGCTTCATGTTGGAACTTTTCCTCAGAACCCACCTTAAATTTGATTATATTTTGGAAAATGTGTACGAATCTGATCCAGTTCTAAAAAGTCATTGGACTATGACGGCTCTTAAGCATGATCTGGCATTGCTTGAAAACCAGATTCCCTTCCTTATTCTCCAAATTCTGTACGATATTCTCCGCCCTTTTGTCAAGAAAAGTTGTAAAGCGCCAAAGTCGGTCACTAGCCTTGCTTTAAATTTCTTCAAGTCTTCTATGAGCCAAAAGGAGATTCGAAAAGACGCTTCGGTCAGAGACTGCAAGCATTTGCTTGATCTCTTGCACAAATTCTACTTCCCAGTTCCTGACGCTCCTGTCTTCTCAACCAATGGCAACGATATAGAATCCAATACCAATCCCAAAAATAAACAAAATGCACGCCCTGCTAAAAATAAATGGGGATTCAATTATTGCGCTTCAAAAATTTTGGAGTCTGGAATCGAGTTCCGAAAGGGGTCGAATACTGAGGAAAGTTTGTTGGACATAACTTTCAATCAGCCAGATGGTATAATCTATATACCAAGACTGGTCATTCACGACACAACAAGTATCTCACTCTTCAGGAACTTGATTGCTTTTGAGCAATACAGTCTTAGCAGGACGCAAAGCGTCACATCATATGCCTTCCTCATGAGGAGTCTCATCAGTTCCTCACGGGACAGCAAACTGCTTGAGGAAAAAGGGATCATTGAGCACAGTTCTAATGGAAACGAAGAGTATTTGGCTGATAAATTCCGAAGTATACTGGATGGAGTTGACTTGATGGAGTTGGACGACTTCCGTTTTCGCGAGCTGTGCGCCAGGGTGAATGATTACCACAAGTCCTGGTACAATCTGAAAAGACTTAAAGTATTTTATCAAAAACAGAGACGAATCCTCTGGGCTAATTATCTCTCTAGTGCATGGAAAGTCATGTCAATCCTGGCCGCGGTGACCATTCTCATTCTCACTTCCTTACAGACATACTATACAATCCACCCTCGCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

648

Amino Acids

73.1

Weight (kDa)

9.15

Isoelectric Point (pI)

38.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 211 - 634 1.5e-99 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1202, 1268
AatII GACGTC 1 cut(s) 38
AccI GTMKAC 2 cut(s) 239, 1696
AccII CGCG 3 cut(s) 687, 1743, 1883
AccIII TCCGGA 1 cut(s) 643
AclWI GGATC 5 cut(s) 342, 437, 570, 983, 1646
AcoI YGGCCR 1 cut(s) 1878
AcsI RAATTY 7 cut(s) 743, 953, 1077, 1153, 1241, 1377, 1685
AcuI CTGAAG 1 cut(s) 1498
AcyI GRCGYC 1 cut(s) 35
AfaI GTAC 4 cut(s) 586, 980, 1085, 1784
AfiI CCNNNNNNNGG 2 cut(s) 577, 1882
AflII CTTAAG 1 cut(s) 1025
AgsI TTSAA 6 cut(s) 802, 1049, 1162, 1360, 1374, 1447
AjnI CCWGG 4 cut(s) 445, 1754, 1778, 1875
AjuI GAANNNNNNNTTGG 2 cut(s) 1170, 1202
AluBI AGCT 4 cut(s) 44, 120, 889, 1747
AluI AGCT 4 cut(s) 44, 120, 889, 1747
Alw21I GWGCWC 7 cut(s) 156, 177, 208, 260, 271, 727, 1650
Alw26I GTCTC 7 cut(s) 251, 495, 523, 708, 1203, 1598, 1816
Alw44I GTGCAC 1 cut(s) 723
AlwI GGATC 5 cut(s) 342, 437, 570, 983, 1646
AlwNI CAGNNNCTG 2 cut(s) 1212, 1259
Aor13HI TCCGGA 1 cut(s) 643
AoxI GGCC 5 cut(s) 23, 88, 381, 448, 1878
ApaI GGGCCC 1 cut(s) 385
ApaLI GTGCAC 1 cut(s) 723
ApeKI GCWGC 4 cut(s) 41, 73, 117, 915
ApoI RAATTY 7 cut(s) 743, 953, 1077, 1153, 1241, 1377, 1685
Asp700I GAANNNNTTC 1 cut(s) 840
AspLEI GCGC 3 cut(s) 1126, 1370, 1754
AspS9I GGNCC 5 cut(s) 23, 88, 381, 382, 701
AsuHPI GGTGA 3 cut(s) 328, 1771, 1897
AsuII TTCGAA 2 cut(s) 655, 1189
AvaII GGWCC 1 cut(s) 701
BaeGI GKGCMC 2 cut(s) 385, 727
BanII GRGCYC 1 cut(s) 385
BbsI GAAGAC 2 cut(s) 1158, 1264
Bbv12I GWGCWC 7 cut(s) 156, 177, 208, 260, 271, 727, 1650
BbvI GCAGC 4 cut(s) 53, 85, 129, 902
BccI CCATC 8 cut(s) 575, 599, 717, 863, 905, 1451, 1697, 1711
BceAI ACGGC 2 cut(s) 415, 1035
BcgI CGANNNNNNTGC 7 cut(s) 8, 30, 42, 50, 73, 84, 107
BciT130I CCWGG 4 cut(s) 447, 1756, 1780, 1877
BciVI GTATCC 1 cut(s) 520
BcoDI GTCTC 7 cut(s) 251, 495, 523, 708, 1203, 1598, 1816
BfaI CTAG 4 cut(s) 113, 494, 1140, 1851
BfmI CTRYAG 1 cut(s) 853
BfoI RGCGCY 1 cut(s) 1127
BfrI CTTAAG 1 cut(s) 1025
BfuI GTATCC 1 cut(s) 520
BglII AGATCT 1 cut(s) 419
BisI GCNGC 7 cut(s) 42, 74, 118, 501, 504, 916, 1881
BlsI GCNGC 7 cut(s) 43, 75, 119, 502, 505, 917, 1882
Bme1390I CCNGG 4 cut(s) 447, 1756, 1780, 1877
Bme18I GGWCC 1 cut(s) 701
BmgT120I GGNCC 5 cut(s) 23, 88, 381, 382, 701
BmiI GGNNCC 5 cut(s) 24, 89, 382, 383, 384
BmrFI CCNGG 4 cut(s) 447, 1756, 1780, 1877
BmrI ACTGGG 2 cut(s) 380, 1247
BmsI GCATC 3 cut(s) 430, 661, 819
BmuI ACTGGG 2 cut(s) 380, 1247
BpiI GAAGAC 2 cut(s) 1158, 1264
Bpu10I CCTNAGC 1 cut(s) 549
Bpu14I TTCGAA 2 cut(s) 655, 1189
BpuEI CTTGAG 1 cut(s) 1646
Bsa29I ATCGAT 2 cut(s) 321, 603
BsaHI GRCGYC 1 cut(s) 35
BsaI GGTCTC 1 cut(s) 251
BsaJI CCNNGG 4 cut(s) 26, 91, 1755, 1881
BsaWI WCCGGW 1 cut(s) 643
BsaXI ACNNNNNCTCC 2 cut(s) 473, 503
Bsc4I CCNNNNNNNGG 2 cut(s) 577, 1882
Bse1I ACTGG 6 cut(s) 310, 386, 992, 1253, 1485, 1704
Bse3DI GCAATG 2 cut(s) 847, 1040
BseAI TCCGGA 1 cut(s) 643
BseBI CCWGG 4 cut(s) 447, 1756, 1780, 1877
BseCI ATCGAT 2 cut(s) 321, 603
BseDI CCNNGG 4 cut(s) 26, 91, 1755, 1881
BseGI GGATG 4 cut(s) 586, 676, 810, 1708
BseLI CCNNNNNNNGG 2 cut(s) 577, 1882
BseMI GCAATG 2 cut(s) 847, 1040
BseMII CTCAG 2 cut(s) 952, 1410
BseNI ACTGG 6 cut(s) 310, 386, 992, 1253, 1485, 1704
BseRI GAGGAG 1 cut(s) 1603
BseSI GKGCMC 2 cut(s) 385, 727
BseXI GCAGC 4 cut(s) 53, 85, 129, 902
BsgI GTGCAG 1 cut(s) 80
Bsh1236I CGCG 3 cut(s) 687, 1743, 1883
BshFI GGCC 5 cut(s) 25, 90, 383, 450, 1880
BshVI ATCGAT 2 cut(s) 321, 603
BsiHKAI GWGCWC 7 cut(s) 156, 177, 208, 260, 271, 727, 1650
BsiSI CCGG 1 cut(s) 644
BslFI GGGAC 2 cut(s) 367, 1625
BslI CCNNNNNNNGG 2 cut(s) 577, 1882
BsmAI GTCTC 7 cut(s) 251, 495, 523, 708, 1203, 1598, 1816
BsmBI CGTCTC 2 cut(s) 523, 1816
BsmFI GGGAC 2 cut(s) 367, 1625
BsnI GGCC 5 cut(s) 25, 90, 383, 450, 1880
Bso31I GGTCTC 1 cut(s) 251
Bsp119I TTCGAA 2 cut(s) 655, 1189
Bsp120I GGGCCC 1 cut(s) 381
Bsp1286I GDGCHC 8 cut(s) 156, 177, 208, 260, 271, 385, 727, 1650
Bsp13I TCCGGA 1 cut(s) 643
Bsp68I TCGCGA 1 cut(s) 1743
BspANI GGCC 5 cut(s) 25, 90, 383, 450, 1880
BspCNI CTCAG 2 cut(s) 951, 1411
BspDI ATCGAT 2 cut(s) 321, 603
BspEI TCCGGA 1 cut(s) 643
BspFNI CGCG 3 cut(s) 687, 1743, 1883
BspHI TCATGA 1 cut(s) 1584
BspLI GGNNCC 5 cut(s) 24, 89, 382, 383, 384
BspPI GGATC 5 cut(s) 342, 437, 570, 983, 1646
BspT104I TTCGAA 2 cut(s) 655, 1189
BspTI CTTAAG 1 cut(s) 1025
BspTNI GGTCTC 1 cut(s) 251
BsrDI GCAATG 2 cut(s) 847, 1040
BsrI ACTGG 6 cut(s) 310, 386, 992, 1253, 1485, 1704
BssECI CCNNGG 4 cut(s) 26, 91, 1755, 1881
BssNAI GTATAC 1 cut(s) 1697
BssNI GRCGYC 1 cut(s) 35
Bst1107I GTATAC 1 cut(s) 1697
Bst2UI CCWGG 4 cut(s) 447, 1756, 1780, 1877
Bst4CI ACNGT 2 cut(s) 1544, 1652
Bst6I CTCTTC 4 cut(s) 519, 831, 1517, 1662
BstACI GRCGYC 1 cut(s) 35
BstAFI CTTAAG 1 cut(s) 1025
BstAPI GCANNNNNTGC 1 cut(s) 1337
BstBI TTCGAA 2 cut(s) 655, 1189
BstC8I GCNNGC 4 cut(s) 891, 1217, 1333, 1745
BstDEI CTNAG 5 cut(s) 326, 549, 938, 1419, 1547
BstDSI CCRYGG 1 cut(s) 1881
BstEII GGTNACC 1 cut(s) 1885
BstF5I GGATG 4 cut(s) 586, 676, 810, 1708
BstFNI CGCG 3 cut(s) 687, 1743, 1883
BstH2I RGCGCY 1 cut(s) 1127
BstHHI GCGC 3 cut(s) 1126, 1370, 1754
BstMAI GTCTC 7 cut(s) 251, 495, 523, 708, 1203, 1598, 1816
BstMWI GCNNNNNNNGC 2 cut(s) 1337, 1749
BstNI CCWGG 4 cut(s) 447, 1756, 1780, 1877
BstPI GGTNACC 1 cut(s) 1885
BstSCI CCNGG 4 cut(s) 445, 1754, 1778, 1875
BstSFI CTRYAG 1 cut(s) 853
BstSLI GKGCMC 2 cut(s) 385, 727
BstUI CGCG 3 cut(s) 687, 1743, 1883
BstV1I GCAGC 4 cut(s) 53, 85, 129, 902
BstV2I GAAGAC 2 cut(s) 1158, 1264
BstX2I RGATCY 1 cut(s) 419
BstYI RGATCY 1 cut(s) 419
BstZ17I GTATAC 1 cut(s) 1697
Bsu15I ATCGAT 2 cut(s) 321, 603
BsuI GTATCC 1 cut(s) 520
BsuRI GGCC 5 cut(s) 25, 90, 383, 450, 1880
BsuTUI ATCGAT 2 cut(s) 321, 603
BtgI CCRYGG 1 cut(s) 1881
BtgZI GCGATG 1 cut(s) 453
BtsCI GGATG 4 cut(s) 586, 676, 810, 1708
BtsIMutI CAGTG 1 cut(s) 393
BtuMI TCGCGA 1 cut(s) 1743
Cac8I GCNNGC 4 cut(s) 891, 1217, 1333, 1745
CaiI CAGNNNCTG 2 cut(s) 1212, 1259
CciI TCATGA 1 cut(s) 1584
CfoI GCGC 3 cut(s) 1126, 1370, 1754
Cfr13I GGNCC 5 cut(s) 23, 88, 381, 382, 701
Cfr42I CCGCGG 1 cut(s) 1884
ClaI ATCGAT 2 cut(s) 321, 603
CseI GACGC 4 cut(s) 1205, 1271, 1552, 1564
Csp6I GTAC 4 cut(s) 585, 979, 1084, 1783
CviAII CATG 5 cut(s) 922, 1031, 1585, 1857, 1867
CviQI GTAC 4 cut(s) 585, 979, 1084, 1783
DdeI CTNAG 5 cut(s) 326, 549, 938, 1419, 1547
DraI TTTAAA 1 cut(s) 1152
DrdI GACNNNNNNGTC 2 cut(s) 1202, 1268
DseDI GACNNNNNNGTC 2 cut(s) 1202, 1268
EaeI YGGCCR 1 cut(s) 1878
Eam1104I CTCTTC 4 cut(s) 519, 831, 1517, 1662
EarI CTCTTC 4 cut(s) 519, 831, 1517, 1662
EciI GGCGGA 1 cut(s) 1085
Eco24I GRGCYC 1 cut(s) 385
Eco31I GGTCTC 1 cut(s) 251
Eco47I GGWCC 1 cut(s) 701
Eco57I CTGAAG 1 cut(s) 1498
Eco91I GGTNACC 1 cut(s) 1885
EcoO109I RGGNCCY 4 cut(s) 23, 88, 381, 382
EcoO65I GGTNACC 1 cut(s) 1885
EcoRII CCWGG 4 cut(s) 445, 1754, 1778, 1875
EcoT38I GRGCYC 1 cut(s) 385
Esp3I CGTCTC 2 cut(s) 523, 1816
FaeI CATG 5 cut(s) 925, 1034, 1588, 1860, 1870
FaqI GGGAC 2 cut(s) 367, 1625
FatI CATG 5 cut(s) 921, 1030, 1584, 1856, 1866
FauI CCCGC 1 cut(s) 692
FauNDI CATATG 1 cut(s) 1573
FblI GTMKAC 2 cut(s) 239, 1696
Fnu4HI GCNGC 7 cut(s) 42, 74, 118, 501, 504, 916, 1881
FokI GGATG 4 cut(s) 593, 683, 797, 1715
FriOI GRGCYC 1 cut(s) 385
Fsp4HI GCNGC 7 cut(s) 42, 74, 118, 501, 504, 916, 1881
FspBI CTAG 4 cut(s) 113, 494, 1140, 1851
GlaI GCGC 3 cut(s) 1125, 1369, 1753
GluI GCNGC 7 cut(s) 42, 74, 118, 501, 504, 916, 1881
HaeII RGCGCY 1 cut(s) 1127
HaeIII GGCC 5 cut(s) 25, 90, 383, 450, 1880
HapII CCGG 1 cut(s) 644
HgaI GACGC 4 cut(s) 1205, 1271, 1552, 1564
HhaI GCGC 3 cut(s) 1126, 1370, 1754
Hin1I GRCGYC 1 cut(s) 35
Hin1II CATG 5 cut(s) 925, 1034, 1588, 1860, 1870
Hin6I GCGC 3 cut(s) 1124, 1368, 1752
HinP1I GCGC 3 cut(s) 1124, 1368, 1752
HincII GTYRAC 2 cut(s) 240, 1711
HindII GTYRAC 2 cut(s) 240, 1711
HpaII CCGG 1 cut(s) 644
HphI GGTGA 3 cut(s) 328, 1771, 1897
Hpy166II GTNNAC 5 cut(s) 240, 725, 979, 1697, 1711
Hpy188I TCNGA 9 cut(s) 424, 429, 468, 941, 988, 1208, 1403, 1691, 1791
Hpy8I GTNNAC 5 cut(s) 240, 725, 979, 1697, 1711
Hpy99I CGWCG 2 cut(s) 40, 407
HpyAV CCTTC 4 cut(s) 658, 796, 1072, 1588
HpyCH4III ACNGT 2 cut(s) 1544, 1652
HpyCH4IV ACGT 1 cut(s) 35
HpyCH4V TGCA 8 cut(s) 61, 396, 725, 810, 1215, 1237, 1331, 1856
HpyF10VI GCNNNNNNNGC 2 cut(s) 1337, 1749
HpyF3I CTNAG 5 cut(s) 326, 549, 938, 1419, 1547
HpySE526I ACGT 1 cut(s) 35
Hsp92I GRCGYC 1 cut(s) 35
Hsp92II CATG 5 cut(s) 925, 1034, 1588, 1860, 1870
HspAI GCGC 3 cut(s) 1124, 1368, 1752
Kpn2I TCCGGA 1 cut(s) 643
KspI CCGCGG 1 cut(s) 1884
LmnI GCTCC 2 cut(s) 448, 1270
Lsp1109I GCAGC 4 cut(s) 53, 85, 129, 902
LweI GCATC 3 cut(s) 430, 661, 819
MaeI CTAG 4 cut(s) 113, 494, 1140, 1851
MaeII ACGT 1 cut(s) 35
MaeIII GTNAC 5 cut(s) 732, 872, 1135, 1564, 1885
MboII GAAGA 9 cut(s) 536, 758, 794, 848, 1150, 1158, 1264, 1504, 1679
MfeI CAATTG 2 cut(s) 696, 1939
MflI RGATCY 1 cut(s) 419
MhlI GDGCHC 8 cut(s) 156, 177, 208, 260, 271, 385, 727, 1650
MlyI GAGTC 3 cut(s) 472, 1394, 1600
MmeI TCCRAC 3 cut(s) 906, 1413, 1704
MroI TCCGGA 1 cut(s) 643
MroXI GAANNNNTTC 1 cut(s) 840
MseI TTAA 4 cut(s) 951, 1026, 1151, 1800
MspA1I CMGCKG 2 cut(s) 858, 1883
MspCI CTTAAG 1 cut(s) 1025
MspI CCGG 1 cut(s) 644
MspR9I CCNGG 4 cut(s) 447, 1756, 1780, 1877
MunI CAATTG 2 cut(s) 696, 1939
MvaI CCWGG 4 cut(s) 447, 1756, 1780, 1877
MvnI CGCG 3 cut(s) 687, 1743, 1883
MwoI GCNNNNNNNGC 2 cut(s) 1337, 1749
NdeI CATATG 1 cut(s) 1573
NlaIII CATG 5 cut(s) 925, 1034, 1588, 1860, 1870
NlaIV GGNNCC 5 cut(s) 24, 89, 382, 383, 384
NmeAIII GCCGAG 8 cut(s) 7, 60, 72, 135, 156, 187, 228, 250
NmuCI GTSAC 4 cut(s) 732, 1135, 1564, 1885
NruI TCGCGA 1 cut(s) 1743
NspV TTCGAA 2 cut(s) 655, 1189
PagI TCATGA 1 cut(s) 1584
PcsI WCGNNNNNNNCGW 1 cut(s) 873
PdmI GAANNNNTTC 1 cut(s) 840
PfeI GAWTC 9 cut(s) 555, 841, 983, 1057, 1186, 1298, 1356, 1392, 1827
PkrI GCNGC 7 cut(s) 43, 75, 119, 502, 505, 917, 1882
PleI GAGTC 3 cut(s) 471, 1393, 1599
PpsI GAGTC 3 cut(s) 471, 1393, 1599
Psp6I CCWGG 4 cut(s) 445, 1754, 1778, 1875
PspEI GGTNACC 1 cut(s) 1885
PspGI CCWGG 4 cut(s) 445, 1754, 1778, 1875
PspN4I GGNNCC 5 cut(s) 24, 89, 382, 383, 384
PspOMI GGGCCC 1 cut(s) 381
PspPI GGNCC 5 cut(s) 23, 88, 381, 382, 701
PstNI CAGNNNCTG 2 cut(s) 1212, 1259
PsuI RGATCY 1 cut(s) 419
RruI TCGCGA 1 cut(s) 1743
RsaI GTAC 4 cut(s) 586, 980, 1085, 1784
RsaNI GTAC 4 cut(s) 585, 979, 1084, 1783
SacII CCGCGG 1 cut(s) 1884
SalI GTCGAC 1 cut(s) 238
SaqAI TTAA 4 cut(s) 951, 1026, 1151, 1800
SatI GCNGC 7 cut(s) 42, 74, 118, 501, 504, 916, 1881
Sau96I GGNCC 5 cut(s) 23, 88, 381, 382, 701
SchI GAGTC 3 cut(s) 472, 1394, 1600
ScrFI CCNGG 4 cut(s) 447, 1756, 1780, 1877
SduI GDGCHC 8 cut(s) 156, 177, 208, 260, 271, 385, 727, 1650
SfaNI GCATC 3 cut(s) 430, 661, 819
SfcI CTRYAG 1 cut(s) 853
Sfr303I CCGCGG 1 cut(s) 1884
SfuI TTCGAA 2 cut(s) 655, 1189
SgrBI CCGCGG 1 cut(s) 1884
SinI GGWCC 1 cut(s) 701
SmlI CTYRAG 2 cut(s) 1025, 1625
SmoI CTYRAG 2 cut(s) 1025, 1625
SspMI CTAG 4 cut(s) 113, 494, 1140, 1851
StyD4I CCNGG 4 cut(s) 445, 1754, 1778, 1875
TaaI ACNGT 2 cut(s) 1544, 1652
TaiI ACGT 1 cut(s) 38
TaqII GACCGA 2 cut(s) 1123, 1192
TauI GCSGC 3 cut(s) 503, 506, 1883
TfiI GAWTC 9 cut(s) 555, 841, 983, 1057, 1186, 1298, 1356, 1392, 1827
Tru1I TTAA 4 cut(s) 951, 1026, 1151, 1800
Tru9I TTAA 4 cut(s) 951, 1026, 1151, 1800
TscAI CASTG 1 cut(s) 393
TseFI GTSAC 4 cut(s) 732, 1135, 1564, 1885
TseI GCWGC 4 cut(s) 41, 73, 117, 915
Tsp45I GTSAC 4 cut(s) 732, 1135, 1564, 1885
TspDTI ATGAA 2 cut(s) 586, 910
TspGWI ACGGA 6 cut(s) 420, 532, 536, 547, 803, 1724
TspRI CASTG 1 cut(s) 393
Vha464I CTTAAG 1 cut(s) 1025
VneI GTGCAC 1 cut(s) 723
VpaK11BI GGWCC 1 cut(s) 701
XapI RAATTY 7 cut(s) 743, 953, 1077, 1153, 1241, 1377, 1685
XcmI CCANNNNNNNNNTGG 1 cut(s) 826
XmiI GTMKAC 2 cut(s) 239, 1696
XmnI GAANNNNTTC 1 cut(s) 840
XspI CTAG 4 cut(s) 113, 494, 1140, 1851
ZraI GACGTC 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.