ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 152 |
| AclWI | GGATC | 1 cut(s) | 209 |
| AcsI | RAATTY | 2 cut(s) | 13, 162 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 109 |
| AgsI | TTSAA | 1 cut(s) | 222 |
| AluBI | AGCT | 1 cut(s) | 281 |
| AluI | AGCT | 1 cut(s) | 281 |
| AlwI | GGATC | 1 cut(s) | 209 |
| AoxI | GGCC | 3 cut(s) | 56, 322, 337 |
| ApeKI | GCWGC | 2 cut(s) | 154, 157 |
| ApoI | RAATTY | 2 cut(s) | 13, 162 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 398 |
| AspS9I | GGNCC | 2 cut(s) | 322, 337 |
| AsuC2I | CCSGG | 1 cut(s) | 104 |
| AsuHPI | GGTGA | 2 cut(s) | 100, 272 |
| BbvI | GCAGC | 2 cut(s) | 141, 144 |
| BcnI | CCSGG | 1 cut(s) | 104 |
| BisI | GCNGC | 2 cut(s) | 155, 158 |
| BlsI | GCNGC | 2 cut(s) | 156, 159 |
| Bme1390I | CCNGG | 1 cut(s) | 104 |
| BmgT120I | GGNCC | 2 cut(s) | 322, 337 |
| BmrFI | CCNGG | 1 cut(s) | 104 |
| BmsI | GCATC | 1 cut(s) | 81 |
| BpuMI | CCSGG | 1 cut(s) | 104 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 109 |
| Bse3DI | GCAATG | 1 cut(s) | 204 |
| BseGI | GGATG | 1 cut(s) | 299 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 109 |
| BseMI | GCAATG | 1 cut(s) | 204 |
| BseRI | GAGGAG | 1 cut(s) | 298 |
| BseXI | GCAGC | 2 cut(s) | 141, 144 |
| BshFI | GGCC | 3 cut(s) | 58, 324, 339 |
| BsiSI | CCGG | 1 cut(s) | 104 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 109 |
| BsmI | GAATGC | 1 cut(s) | 364 |
| BsnI | GGCC | 3 cut(s) | 58, 324, 339 |
| Bsp143I | GATC | 1 cut(s) | 214 |
| BspACI | CCGC | 1 cut(s) | 152 |
| BspANI | GGCC | 3 cut(s) | 58, 324, 339 |
| BspPI | GGATC | 1 cut(s) | 209 |
| BsrDI | GCAATG | 1 cut(s) | 204 |
| BssMI | GATC | 1 cut(s) | 214 |
| BstDEI | CTNAG | 1 cut(s) | 354 |
| BstF5I | GGATG | 1 cut(s) | 299 |
| BstKTI | GATC | 1 cut(s) | 217 |
| BstMBI | GATC | 1 cut(s) | 214 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 278, 359 |
| BstSCI | CCNGG | 1 cut(s) | 102 |
| BstV1I | GCAGC | 2 cut(s) | 141, 144 |
| BstX2I | RGATCY | 1 cut(s) | 214 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 319 |
| BstYI | RGATCY | 1 cut(s) | 214 |
| BsuRI | GGCC | 3 cut(s) | 58, 324, 339 |
| BtsCI | GGATG | 1 cut(s) | 299 |
| Cfr13I | GGNCC | 2 cut(s) | 322, 337 |
| CseI | GACGC | 1 cut(s) | 285 |
| CviAII | CATG | 1 cut(s) | 138 |
| CviJI | RGCY | 5 cut(s) | 58, 135, 281, 324, 339 |
| CviKI_1 | RGCY | 5 cut(s) | 58, 135, 281, 324, 339 |
| DdeI | CTNAG | 1 cut(s) | 354 |
| DpnI | GATC | 1 cut(s) | 216 |
| DpnII | GATC | 1 cut(s) | 214 |
| EcoRI | GAATTC | 1 cut(s) | 13 |
| FaeI | CATG | 1 cut(s) | 141 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 347, 379 |
| FatI | CATG | 1 cut(s) | 137 |
| Fnu4HI | GCNGC | 2 cut(s) | 155, 158 |
| FokI | GGATG | 1 cut(s) | 286 |
| Fsp4HI | GCNGC | 2 cut(s) | 155, 158 |
| GluI | GCNGC | 2 cut(s) | 155, 158 |
| HaeIII | GGCC | 3 cut(s) | 58, 324, 339 |
| HapII | CCGG | 1 cut(s) | 104 |
| HgaI | GACGC | 1 cut(s) | 285 |
| Hin1II | CATG | 1 cut(s) | 141 |
| HincII | GTYRAC | 1 cut(s) | 267 |
| HindII | GTYRAC | 1 cut(s) | 267 |
| HindIII | AAGCTT | 1 cut(s) | 279 |
| HinfI | GANTC | 1 cut(s) | 254 |
| HpaI | GTTAAC | 1 cut(s) | 267 |
| HpaII | CCGG | 1 cut(s) | 104 |
| HphI | GGTGA | 2 cut(s) | 100, 272 |
| Hpy166II | GTNNAC | 1 cut(s) | 267 |
| Hpy188I | TCNGA | 2 cut(s) | 253, 404 |
| Hpy188III | TCNNGA | 1 cut(s) | 8 |
| Hpy8I | GTNNAC | 1 cut(s) | 267 |
| HpyAV | CCTTC | 2 cut(s) | 228, 371 |
| HpyCH4V | TGCA | 3 cut(s) | 94, 160, 209 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 278, 359 |
| HpyF3I | CTNAG | 1 cut(s) | 354 |
| Hsp92II | CATG | 1 cut(s) | 141 |
| KspAI | GTTAAC | 1 cut(s) | 267 |
| Kzo9I | GATC | 1 cut(s) | 214 |
| LpnPI | CCDG | 4 cut(s) | 60, 117, 186, 243 |
| Lsp1109I | GCAGC | 2 cut(s) | 141, 144 |
| LweI | GCATC | 1 cut(s) | 81 |
| MalI | GATC | 1 cut(s) | 216 |
| MboI | GATC | 1 cut(s) | 214 |
| MboII | GAAGA | 2 cut(s) | 137, 403 |
| MflI | RGATCY | 1 cut(s) | 214 |
| MluCI | AATT | 5 cut(s) | 13, 27, 43, 162, 394 |
| MnlI | CCTC | 2 cut(s) | 159, 319 |
| MroXI | GAANNNNTTC | 1 cut(s) | 398 |
| MseI | TTAA | 4 cut(s) | 26, 63, 266, 384 |
| MspA1I | CMGCKG | 1 cut(s) | 154 |
| MspI | CCGG | 1 cut(s) | 104 |
| MspR9I | CCNGG | 1 cut(s) | 104 |
| Mva1269I | GAATGC | 1 cut(s) | 364 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 278, 359 |
| NciI | CCSGG | 1 cut(s) | 104 |
| NdeII | GATC | 1 cut(s) | 214 |
| NlaIII | CATG | 1 cut(s) | 141 |
| PctI | GAATGC | 1 cut(s) | 364 |
| PdmI | GAANNNNTTC | 1 cut(s) | 398 |
| PfeI | GAWTC | 1 cut(s) | 254 |
| PkrI | GCNGC | 2 cut(s) | 156, 159 |
| PspPI | GGNCC | 2 cut(s) | 322, 337 |
| PsuI | RGATCY | 1 cut(s) | 214 |
| SaqAI | TTAA | 4 cut(s) | 26, 63, 266, 384 |
| SatI | GCNGC | 2 cut(s) | 155, 158 |
| Sau3AI | GATC | 1 cut(s) | 214 |
| Sau96I | GGNCC | 2 cut(s) | 322, 337 |
| ScrFI | CCNGG | 1 cut(s) | 104 |
| SetI | ASST | 3 cut(s) | 262, 283, 382 |
| SfaNI | GCATC | 1 cut(s) | 81 |
| Sse9I | AATT | 5 cut(s) | 13, 27, 43, 162, 394 |
| SsiI | CCGC | 1 cut(s) | 152 |
| StyD4I | CCNGG | 1 cut(s) | 102 |
| TaqI | TCGA | 1 cut(s) | 116 |
| TasI | AATT | 5 cut(s) | 13, 27, 43, 162, 394 |
| TfiI | GAWTC | 1 cut(s) | 254 |
| Tru1I | TTAA | 4 cut(s) | 26, 63, 266, 384 |
| Tru9I | TTAA | 4 cut(s) | 26, 63, 266, 384 |
| TseI | GCWGC | 2 cut(s) | 154, 157 |
| TspDTI | ATGAA | 1 cut(s) | 155 |
| XapI | RAATTY | 2 cut(s) | 13, 162 |
| XmnI | GAANNNNTTC | 1 cut(s) | 398 |