Rh2BG613700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
83648257 .. 83658185
9929 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG613700.1

Sequence Viewer

Length: 513 bp
ATGGGACCAAAACCAATGTTTAGAAGAACAAAGAGGGATACAAGTGAACACGCAATTCGGCAAAGAAGAACTAAATCTAATTGTGTTTTGTTCGGTGGACATCAATACGATGAGGCTAGATCAAAGAAATCGAAAACAATGTCTGATGTCCAAATTGCTGAAAGATCAAATCAATCTGGGAATATTGATGGATTTGAGTACTATGATGAATGGTTTAGGAATCAGAACCAAAATAATTTCTGTATGGATGACAACGGACGCTCTCCTTCAACTGTGGTTGCACAAGGGAATCAATATAGTGCAATTAACTCGAGGAGGTGGAAAACATTATCTCAACCAATAATGACAAGAGAGAATCAGCTTGGGGAAATGAGCAATCCGAATGTTGACATAATGGAAAATCGTGATCAACAAGAGGTTGTTCAGGTCACAGATTGGTGGAACTTAGGAATAAGGTTCTATGCAAACGATTATTTGTATTGTTCAGTTGCTGCTTTTCTTGGTCTGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

170

Amino Acids

19.89

Weight (kDa)

8.44

Isoelectric Point (pI)

53.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 200
AgsI TTSAA 1 cut(s) 270
AluBI AGCT 1 cut(s) 361
AluI AGCT 1 cut(s) 361
AlwNI CAGNNNCTG 1 cut(s) 491
Ama87I CYCGRG 1 cut(s) 310
ApeKI GCWGC 1 cut(s) 491
ArsI GACNNNNNNTTYG 2 cut(s) 125, 157
AspS9I GGNCC 1 cut(s) 5
AvaI CYCGRG 1 cut(s) 310
AvaII GGWCC 1 cut(s) 5
BbvI GCAGC 1 cut(s) 478
BccI CCATC 1 cut(s) 182
BcgI CGANNNNNNTGC 2 cut(s) 291, 325
BciVI GTATCC 1 cut(s) 31
BclI TGATCA 1 cut(s) 406
BfaI CTAG 1 cut(s) 117
BfuI GTATCC 1 cut(s) 31
BisI GCNGC 1 cut(s) 492
BlsI GCNGC 1 cut(s) 493
BmcAI AGTACT 1 cut(s) 200
Bme18I GGWCC 1 cut(s) 5
BmeT110I CYCGRG 1 cut(s) 310
BmgT120I GGNCC 1 cut(s) 5
BmiI GGNNCC 1 cut(s) 6
BseGI GGATG 1 cut(s) 253
BseRI GAGGAG 1 cut(s) 328
BseXI GCAGC 1 cut(s) 478
BsiHKCI CYCGRG 1 cut(s) 310
BslFI GGGAC 1 cut(s) 18
BsmFI GGGAC 1 cut(s) 18
BsoBI CYCGRG 1 cut(s) 310
Bsp143I GATC 3 cut(s) 119, 164, 406
BspLI GGNNCC 1 cut(s) 6
BssMI GATC 3 cut(s) 119, 164, 406
Bst4CI ACNGT 1 cut(s) 274
BstDEI CTNAG 1 cut(s) 445
BstF5I GGATG 1 cut(s) 253
BstKTI GATC 3 cut(s) 122, 167, 409
BstMBI GATC 3 cut(s) 119, 164, 406
BstV1I GCAGC 1 cut(s) 478
BsuI GTATCC 1 cut(s) 31
BtsCI GGATG 1 cut(s) 253
CaiI CAGNNNCTG 1 cut(s) 491
Cfr13I GGNCC 1 cut(s) 5
CseI GACGC 1 cut(s) 267
Csp6I GTAC 1 cut(s) 199
CviJI RGCY 2 cut(s) 116, 361
CviKI_1 RGCY 2 cut(s) 116, 361
CviQI GTAC 1 cut(s) 199
DdeI CTNAG 1 cut(s) 445
DpnI GATC 3 cut(s) 121, 166, 408
DpnII GATC 3 cut(s) 119, 164, 406
Eco47I GGWCC 1 cut(s) 5
Eco88I CYCGRG 1 cut(s) 310
FaiI YATR 5 cut(s) 204, 245, 297, 392, 462
FaqI GGGAC 1 cut(s) 18
FbaI TGATCA 1 cut(s) 406
Fnu4HI GCNGC 1 cut(s) 492
FokI GGATG 1 cut(s) 260
Fsp4HI GCNGC 1 cut(s) 492
FspBI CTAG 1 cut(s) 117
GluI GCNGC 1 cut(s) 492
HgaI GACGC 1 cut(s) 267
HincII GTYRAC 1 cut(s) 388
HindII GTYRAC 1 cut(s) 388
HinfI GANTC 3 cut(s) 220, 289, 355
Hpy166II GTNNAC 3 cut(s) 47, 98, 388
Hpy188I TCNGA 3 cut(s) 145, 225, 381
Hpy188III TCNNGA 1 cut(s) 404
Hpy8I GTNNAC 3 cut(s) 47, 98, 388
HpyAV CCTTC 1 cut(s) 276
HpyCH4III ACNGT 1 cut(s) 274
HpyCH4V TGCA 3 cut(s) 281, 302, 464
HpyF3I CTNAG 1 cut(s) 445
Ksp22I TGATCA 1 cut(s) 406
Kzo9I GATC 3 cut(s) 119, 164, 406
LpnPI CCDG 2 cut(s) 162, 410
Lsp1109I GCAGC 1 cut(s) 478
MaeI CTAG 1 cut(s) 117
MaeIII GTNAC 1 cut(s) 427
MalI GATC 3 cut(s) 121, 166, 408
MboI GATC 3 cut(s) 119, 164, 406
MboII GAAGA 2 cut(s) 36, 78
MluCI AATT 5 cut(s) 54, 79, 153, 235, 303
MnlI CCTC 5 cut(s) 27, 106, 306, 309, 409
MseI TTAA 1 cut(s) 306
NdeII GATC 3 cut(s) 119, 164, 406
NlaIV GGNNCC 1 cut(s) 6
NmuCI GTSAC 1 cut(s) 427
PaeR7I CTCGAG 1 cut(s) 310
PfeI GAWTC 3 cut(s) 220, 289, 355
PkrI GCNGC 1 cut(s) 493
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 1 cut(s) 5
PspXI VCTCGAGB 1 cut(s) 310
PstNI CAGNNNCTG 1 cut(s) 491
RsaI GTAC 1 cut(s) 200
RsaNI GTAC 1 cut(s) 199
SaqAI TTAA 1 cut(s) 306
SatI GCNGC 1 cut(s) 492
Sau3AI GATC 3 cut(s) 119, 164, 406
Sau96I GGNCC 1 cut(s) 5
ScaI AGTACT 1 cut(s) 200
SetI ASST 5 cut(s) 320, 363, 420, 429, 458
Sfr274I CTCGAG 1 cut(s) 310
SinI GGWCC 1 cut(s) 5
SlaI CTCGAG 1 cut(s) 310
SmlI CTYRAG 1 cut(s) 310
SmoI CTYRAG 1 cut(s) 310
Sse9I AATT 5 cut(s) 54, 79, 153, 235, 303
SspI AATATT 1 cut(s) 184
SspMI CTAG 1 cut(s) 117
TaaI ACNGT 1 cut(s) 274
TaqI TCGA 2 cut(s) 131, 311
TasI AATT 5 cut(s) 54, 79, 153, 235, 303
TatI WGTACW 1 cut(s) 198
TfiI GAWTC 3 cut(s) 220, 289, 355
Tru1I TTAA 1 cut(s) 306
Tru9I TTAA 1 cut(s) 306
TseFI GTSAC 1 cut(s) 427
TseI GCWGC 1 cut(s) 491
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 1 cut(s) 222
TspGWI ACGGA 1 cut(s) 270
VpaK11BI GGWCC 1 cut(s) 5
XhoI CTCGAG 1 cut(s) 310
XspI CTAG 1 cut(s) 117
ZrmI AGTACT 1 cut(s) 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.