Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0000753

Physical Location & Seq

Genomic Coordinates Forward (+)

35613878 .. 35615633

Gene Structure 1756 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00413200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGTATCGCCTTGATTCTTCTGATTCTAAGGAGACCGATTCGCGTATCGTCAAGTCGACTTCCAACACCCATGAGATCCGATCCCTATGCGTCGAGCGCTTGCTGCCAGAGATGGATGCGAAATATCTCTATGGCTGCTTCAGTGATCATGGCCAGGTTGTAGCTGCCACTGTTATTCATGGTAATGTGAGAACTGGTTTTGTTGAGTTTAATTCTCGGAGCTGGGCTGAGATGATCTTGAAGTCTTACAATGGTCTCGGGATGCCAAACTACCCTCAGATATACCGCCTGAAATGGGATATGGATGCTACCGGTATGATGTGGCGCTGGGATTATGCTTACGAGCGTTGTTCGTACTTTGGTTTTAATGATGCAGGTGAAGAATTGAACGCCAACAAAGCGCTCTTGAGATACAAGCACTTGATACCTGCTGTAAATGAAAAACCAGCTGCTGGTGGTGGTCAGCAACATCAGGAAGGCGTGTCTGGTTTAACATATGAGATAGTTGAAGAGTTTCGCTACTACAACTGGTACGCCGACAGGTTTCTGTATCTATGTATGGAGGAATTGTGTAAGGAAAAAGACGGTTGTTACGTTATCCGCACCCTCAAGTTGTCGAACTTATTGTCATGCTCTTGCAAGTTTGACGAAAAGATTGGGAGTATAATCACCTGCCGCTATTGCGCCGACTGCAACGTGCCATTTGAATTGCAAAAGCAGGCTTGGCTATGCACCAAGGACTTCGGCAACCAGAAAAGTCCGAGGCTTATGGGATGCACTTCTTATTCCCACCAAATTTTGTTCGCCGGCGGCCTGGACCAGTCACCAGATCAAACTCGAGCTCCTTACTATGTGCCGAGTCAAAAATGTTATTATTTTCAGCCGAGAAATATTTTCCACTATAATCCCGAGTGGACATGGCTTCCTTGCTATCTCAAAAGCGGGAAACAGGAGGCCCTGCTGGTTAACGTTGATGGAAGTCTCTGTTGTCTCTCTGGTTTACTCGTTGGTCAGCAAGTCGCTCATCCTACTTTTGAGGTGTTCGATTCCTTTAACGAGAGATGGGTGCCTCTGCCGGATCCTCCTTTTTACAGACCCGAAGCACTGAATTACAAACACGGTGACCCTAGGCCTGGTACACACTTGTCTTATGCAATCATGGGCACCAAGCTTTTGGTCTCGAGCAAGATCCCTGGTTCAGATTCCCCTCACTTTCCCGTTTGTTGCTTTGACGTTGAGGAAAAAAAAGTGGACAGAGGTCACTACCTTGTTCAATGGGCTTTAGTGGTCGACTTGGAGGATGGTACCCATGATAAGGCCATGTTTTACTTCAATAATTATTTTGCTATAAGAGTCTGCCGATTAGTAGTTAATGAGGATGATGGTAGTATTAAGAACTCACCGCACCAATCTCTGGGGATTGATACCCTCATGACTAGCTTATTGGAAATTACCATTCAAAATCAGTCAATGGTGAAAATGTCGTGGGATTTTGTTGATCTAGGAAATAAAAAAGTCTGCTTTGTTTTGTCCTCGAGCCTCCCGAAAGGCAGGGACGACGGGATTTTCTGTCATCGCCAGACCTTGCGTCTTCTTGTCTTGGTAATTCAATTTCAAGTTTTGGAATCAGGAGATTTCTCCTTCAAGTTCCTGGCTACTCGCACCTTTGAATACCAGGGCCATTTCCCTCGCATCTGGCACCCCAAGCTGCAGGGTTGCTTTCTGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00020 ko00190 ko01100 ko01110 ko01120 ko01130 ko01200 ko03015 ko03040 ko04714 ko04932 ko05010 ko05012 ko05016 map00020 map00190 map01100 map01110 map01120 map01130 map01200 map03015 map03040 map04714 map04932 map05010 map05012 map05016

Pfam Domains

Protein Families

RRM_1

Protein Analysis

576

Amino Acids

66.27

Weight (kDa)

6.39

Isoelectric Point (pI)

41.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000753)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g26720 FvH4_7g27001 FvH4_7g27001 FvH4_7g27001 FvH4_7g31210 FvH4_7g31211 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31310 FvH4_7g31320 FvH4_7g31670 FvH4_7g31670 FvH4_7g31681 FvH4_7g31682
rosa_chinensis	RchiOBHm_Chr1g0337091 RchiOBHm_Chr1g0337131 RchiOBHm_Chr1g0380941
rosa_laevigata	RLG00000026258 RLG00000026260 RLG00000026268 RLG00000026269 RLG00000029305
rosa_multiflora	Rmu_co8190652.1_g000001 Rmu_co8273449.1_g000001 Rmu_co8310417.1_g000001 Rmu_sc0002160.1_g000028 Rmu_sc0002160.1_g000031 Rmu_sc0002962.1_g000022 Rmu_sc0004623.1_g000006 Rmu_sc0004623.1_g000007 Rmu_sc0013826.1_g000002 Rmu_sc0013826.1_g000003 Rmu_sc0020974.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105360 Rroxscaffold_4G00314970 Rroxscaffold_6G00413200
rosa_rugosa	Rorug01G0131100 Rorug01G0423200 Rorug01G0424100
rosa_samantha	Rh1AG151800 Rh1AG152100 Rh1AG447500 Rh1AG447600 Rh1AG448600 Rh1AG449500 Rh1AG449700 Rh1BG119600 Rh1BG404200 Rh1BG405400 Rh1CG143000 Rh1CG418300 Rh1DG159000 Rh1DG159300 Rh1DG159400 Rh1DG434600 Rh1DG435500 Rh1DG435900
rosa_wichuraiana	Rw0G005920 Rw0G005960 Rw0G005970 Rw1G012410 Rw1G012420 Rw1G038950 Rw1G039110 Rw1G039170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	365, 680
Acc36I	ACCTGC	3 cut(s)	365, 436, 680
Acc65I	GGTACC	1 cut(s)	1304
AccB1I	GGYRCC	4 cut(s)	1066, 1163, 1304, 1698
AccB7I	CCANNNNNTGG	2 cut(s)	452, 1414
AccI	GTMKAC	2 cut(s)	56, 1290
AccII	CGCG	1 cut(s)	43
AciI	CCGC	6 cut(s)	286, 601, 676, 810, 942, 1403
AclI	AACGTT	1 cut(s)	969
AclWI	GGATC	5 cut(s)	70, 75, 1073, 1086, 1183
AcoI	YGGCCR	1 cut(s)	151
AcsI	RAATTY	1 cut(s)	795
AcuI	CTGAAG	1 cut(s)	124
AfaI	GTAC	4 cut(s)	356, 533, 1138, 1306
AfeI	AGCGCT	2 cut(s)	98, 402
AfiI	CCNNNNNNNGG	5 cut(s)	295, 452, 1133, 1315, 1414
AgeI	ACCGGT	1 cut(s)	311
AhdI	GACNNNNNGTC	1 cut(s)	1587
AjnI	CCWGG	6 cut(s)	153, 813, 1132, 1192, 1650, 1674
AluBI	AGCT	7 cut(s)	164, 222, 449, 842, 1171, 1440, 1708
AluI	AGCT	7 cut(s)	164, 222, 449, 842, 1171, 1440, 1708
Alw21I	GWGCWC	1 cut(s)	844
Alw26I	GTCTC	5 cut(s)	26, 260, 986, 995, 1183
AlwI	GGATC	5 cut(s)	70, 75, 1073, 1086, 1183
AlwNI	CAGNNNCTG	1 cut(s)	452
Ama87I	CYCGRG	5 cut(s)	257, 837, 908, 1180, 1534
Aor51HI	AGCGCT	2 cut(s)	98, 402
AoxI	GGCC	6 cut(s)	151, 811, 954, 1130, 1317, 1678
ApeKI	GCWGC	5 cut(s)	103, 135, 164, 449, 1708
ApoI	RAATTY	1 cut(s)	795
ArsI	GACNNNNNNTTYG	2 cut(s)	611, 643
AsiGI	ACCGGT	1 cut(s)	311
Asp700I	GAANNNNTTC	1 cut(s)	513
Asp718I	GGTACC	1 cut(s)	1304
AspA2I	CCTAGG	1 cut(s)	1127
AspLEI	GCGC	4 cut(s)	99, 327, 403, 686
AspS9I	GGNCC	3 cut(s)	817, 955, 1678
AsuHPI	GGTGA	6 cut(s)	389, 661, 816, 1133, 1392, 1486
AvaI	CYCGRG	5 cut(s)	257, 837, 908, 1180, 1534
AvaII	GGWCC	1 cut(s)	817
AvrII	CCTAGG	1 cut(s)	1127
BaeGI	GKGCMC	1 cut(s)	1166
BalI	TGGCCA	1 cut(s)	153
BamHI	GGATCC	1 cut(s)	1078
BanI	GGYRCC	4 cut(s)	1066, 1163, 1304, 1698
BanII	GRGCYC	1 cut(s)	844
BbsI	GAAGAC	1 cut(s)	1583
Bbv12I	GWGCWC	1 cut(s)	844
BbvI	GCAGC	5 cut(s)	90, 122, 151, 436, 1695
BccI	CCATC	5 cut(s)	106, 968, 1056, 1295, 1376
BcgI	CGANNNNNNTGC	2 cut(s)	69, 103
BciT130I	CCWGG	6 cut(s)	155, 815, 1134, 1194, 1652, 1676
BclI	TGATCA	1 cut(s)	145
BcoDI	GTCTC	5 cut(s)	26, 260, 986, 995, 1183
BfaI	CTAG	3 cut(s)	1128, 1437, 1502
BfmI	CTRYAG	1 cut(s)	1709
BfoI	RGCGCY	3 cut(s)	100, 328, 404
BfuAI	ACCTGC	3 cut(s)	365, 436, 680
BisI	GCNGC	7 cut(s)	104, 136, 165, 450, 676, 811, 1709
BlnI	CCTAGG	1 cut(s)	1127
BlsI	GCNGC	7 cut(s)	105, 137, 166, 451, 677, 812, 1710
Bme1390I	CCNGG	6 cut(s)	155, 815, 1134, 1194, 1652, 1676
Bme18I	GGWCC	1 cut(s)	817
BmeRI	GACNNNNNGTC	1 cut(s)	1587
BmeT110I	CYCGRG	5 cut(s)	257, 837, 908, 1180, 1534
BmgT120I	GGNCC	3 cut(s)	817, 955, 1678
BmiI	GGNNCC	5 cut(s)	1068, 1080, 1165, 1306, 1700
BmrFI	CCNGG	6 cut(s)	155, 815, 1134, 1194, 1652, 1676
BmsI	GCATC	6 cut(s)	106, 252, 295, 361, 764, 1701
BoxI	GACNNNNGTC	1 cut(s)	1257
BpiI	GAAGAC	1 cut(s)	1583
BpuEI	CTTGAG	2 cut(s)	427, 593
BsaI	GGTCTC	3 cut(s)	26, 260, 1183
BsaJI	CCNNGG	5 cut(s)	735, 761, 1127, 1192, 1675
BsaWI	WCCGGW	1 cut(s)	311
BsaXI	ACNNNNNCTCC	4 cut(s)	554, 584, 826, 856
Bsc4I	CCNNNNNNNGG	5 cut(s)	295, 452, 1133, 1315, 1414
Bse118I	RCCGGY	2 cut(s)	311, 806
Bse1I	ACTGG	3 cut(s)	199, 533, 820
BseBI	CCWGG	6 cut(s)	155, 815, 1134, 1194, 1652, 1676
BseDI	CCNNGG	5 cut(s)	735, 761, 1127, 1192, 1675
BseGI	GGATG	7 cut(s)	121, 267, 310, 779, 1024, 1306, 1384
BseLI	CCNNNNNNNGG	5 cut(s)	295, 452, 1133, 1315, 1414
BseMII	CTCAG	2 cut(s)	219, 290
BseNI	ACTGG	3 cut(s)	199, 533, 820
BseSI	GKGCMC	1 cut(s)	1166
BseXI	GCAGC	5 cut(s)	90, 122, 151, 436, 1695
BseYI	CCCAGC	2 cut(s)	222, 327
Bsh1236I	CGCG	1 cut(s)	43
BshFI	GGCC	6 cut(s)	153, 813, 956, 1132, 1319, 1680
BshNI	GGYRCC	4 cut(s)	1066, 1163, 1304, 1698
BshTI	ACCGGT	1 cut(s)	311
BsiHKAI	GWGCWC	1 cut(s)	844
BsiHKCI	CYCGRG	5 cut(s)	257, 837, 908, 1180, 1534
BsiSI	CCGG	3 cut(s)	312, 807, 1076
BslFI	GGGAC	1 cut(s)	1568
BslI	CCNNNNNNNGG	5 cut(s)	295, 452, 1133, 1315, 1414
BsmAI	GTCTC	5 cut(s)	26, 260, 986, 995, 1183
BsmFI	GGGAC	1 cut(s)	1568
BsnI	GGCC	6 cut(s)	153, 813, 956, 1132, 1319, 1680
Bso31I	GGTCTC	3 cut(s)	26, 260, 1183
BsoBI	CYCGRG	5 cut(s)	257, 837, 908, 1180, 1534
Bsp1286I	GDGCHC	2 cut(s)	844, 1166
Bsp143I	GATC	8 cut(s)	75, 80, 145, 234, 829, 1078, 1188, 1498
BspACI	CCGC	6 cut(s)	286, 601, 676, 810, 942, 1403
BspANI	GGCC	6 cut(s)	153, 813, 956, 1132, 1319, 1680
BspCNI	CTCAG	2 cut(s)	220, 289
BspFNI	CGCG	1 cut(s)	43
BspHI	TCATGA	1 cut(s)	1431
BspLI	GGNNCC	5 cut(s)	1068, 1080, 1165, 1306, 1700
BspMAI	CTGCAG	1 cut(s)	1713
BspMI	ACCTGC	3 cut(s)	365, 436, 680
BspPI	GGATC	5 cut(s)	70, 75, 1073, 1086, 1183
BspT107I	GGYRCC	4 cut(s)	1066, 1163, 1304, 1698
BspTNI	GGTCTC	3 cut(s)	26, 260, 1183
BsrFI	RCCGGY	2 cut(s)	311, 806
BsrI	ACTGG	3 cut(s)	199, 533, 820
BssAI	RCCGGY	2 cut(s)	311, 806
BssECI	CCNNGG	5 cut(s)	735, 761, 1127, 1192, 1675
BssMI	GATC	8 cut(s)	75, 80, 145, 234, 829, 1078, 1188, 1498
BssT1I	CCWWGG	2 cut(s)	735, 1127
Bst2UI	CCWGG	6 cut(s)	155, 815, 1134, 1194, 1652, 1676
Bst4CI	ACNGT	3 cut(s)	172, 587, 1121
Bst6I	CTCTTC	1 cut(s)	504
BstC8I	GCNNGC	3 cut(s)	101, 720, 808
BstDEI	CTNAG	3 cut(s)	27, 228, 276
BstEII	GGTNACC	1 cut(s)	1121
BstF5I	GGATG	7 cut(s)	121, 267, 310, 779, 1024, 1306, 1384
BstFNI	CGCG	1 cut(s)	43
BstH2I	RGCGCY	3 cut(s)	100, 328, 404
BstHHI	GCGC	4 cut(s)	99, 327, 403, 686
BstKTI	GATC	8 cut(s)	78, 83, 148, 237, 832, 1081, 1191, 1501
BstMAI	GTCTC	5 cut(s)	26, 260, 986, 995, 1183
BstMBI	GATC	8 cut(s)	75, 80, 145, 234, 829, 1078, 1188, 1498
BstMWI	GCNNNNNNNGC	7 cut(s)	96, 103, 398, 681, 690, 724, 1705
BstNI	CCWGG	6 cut(s)	155, 815, 1134, 1194, 1652, 1676
BstPAI	GACNNNNGTC	1 cut(s)	1257
BstPI	GGTNACC	1 cut(s)	1121
BstSCI	CCNGG	6 cut(s)	153, 813, 1132, 1192, 1650, 1674
BstSFI	CTRYAG	1 cut(s)	1709
BstSLI	GKGCMC	1 cut(s)	1166
BstUI	CGCG	1 cut(s)	43
BstV1I	GCAGC	5 cut(s)	90, 122, 151, 436, 1695
BstV2I	GAAGAC	1 cut(s)	1583
BstX2I	RGATCY	3 cut(s)	75, 1078, 1188
BstXI	CCANNNNNNTGG	1 cut(s)	1174
BstYI	RGATCY	3 cut(s)	75, 1078, 1188
BsuRI	GGCC	6 cut(s)	153, 813, 956, 1132, 1319, 1680
BtgZI	GCGATG	1 cut(s)	1559
BtsCI	GGATG	7 cut(s)	121, 267, 310, 779, 1024, 1306, 1384
BtsIMutI	CAGTG	3 cut(s)	148, 168, 1103
BveI	ACCTGC	3 cut(s)	365, 436, 680
Cac8I	GCNNGC	3 cut(s)	101, 720, 808
CaiI	CAGNNNCTG	1 cut(s)	452
CciI	TCATGA	1 cut(s)	1431
CfoI	GCGC	4 cut(s)	99, 327, 403, 686
Cfr10I	RCCGGY	2 cut(s)	311, 806
Cfr13I	GGNCC	3 cut(s)	817, 955, 1678
CseI	GACGC	2 cut(s)	79, 1577
Csp6I	GTAC	4 cut(s)	355, 532, 1137, 1305
CspAI	ACCGGT	1 cut(s)	311
CviAII	CATG	9 cut(s)	71, 149, 179, 630, 918, 1159, 1310, 1321, 1432
CviQI	GTAC	4 cut(s)	355, 532, 1137, 1305
DdeI	CTNAG	3 cut(s)	27, 228, 276
DpnI	GATC	8 cut(s)	77, 82, 147, 236, 831, 1080, 1190, 1500
DpnII	GATC	8 cut(s)	75, 80, 145, 234, 829, 1078, 1188, 1498
DriI	GACNNNNNGTC	1 cut(s)	1587
EaeI	YGGCCR	1 cut(s)	151
Eam1104I	CTCTTC	1 cut(s)	504
Eam1105I	GACNNNNNGTC	1 cut(s)	1587
EarI	CTCTTC	1 cut(s)	504
Ecl136II	GAGCTC	1 cut(s)	842
Eco130I	CCWWGG	2 cut(s)	735, 1127
Eco147I	AGGCCT	1 cut(s)	1132
Eco24I	GRGCYC	1 cut(s)	844
Eco31I	GGTCTC	3 cut(s)	26, 260, 1183
Eco47I	GGWCC	1 cut(s)	817
Eco47III	AGCGCT	2 cut(s)	98, 402
Eco53kI	GAGCTC	1 cut(s)	842
Eco57I	CTGAAG	1 cut(s)	124
Eco88I	CYCGRG	5 cut(s)	257, 837, 908, 1180, 1534
Eco91I	GGTNACC	1 cut(s)	1121
EcoICRI	GAGCTC	1 cut(s)	842
EcoO109I	RGGNCCY	1 cut(s)	955
EcoO65I	GGTNACC	1 cut(s)	1121
EcoRII	CCWGG	6 cut(s)	153, 813, 1132, 1192, 1650, 1674
EcoT14I	CCWWGG	2 cut(s)	735, 1127
EcoT38I	GRGCYC	1 cut(s)	844
ErhI	CCWWGG	2 cut(s)	735, 1127
FaeI	CATG	9 cut(s)	74, 152, 182, 633, 921, 1162, 1313, 1324, 1435
FaqI	GGGAC	1 cut(s)	1568
FatI	CATG	9 cut(s)	70, 148, 178, 629, 917, 1158, 1309, 1320, 1431
FauI	CCCGC	1 cut(s)	935
FauNDI	CATATG	1 cut(s)	496
FbaI	TGATCA	1 cut(s)	145
FblI	GTMKAC	2 cut(s)	56, 1290
Fnu4HI	GCNGC	7 cut(s)	104, 136, 165, 450, 676, 811, 1709
FokI	GGATG	7 cut(s)	128, 274, 317, 786, 1011, 1313, 1391
FriOI	GRGCYC	1 cut(s)	844
Fsp4HI	GCNGC	7 cut(s)	104, 136, 165, 450, 676, 811, 1709
FspBI	CTAG	3 cut(s)	1128, 1437, 1502
GlaI	GCGC	4 cut(s)	98, 326, 402, 685
GluI	GCNGC	7 cut(s)	104, 136, 165, 450, 676, 811, 1709
GsaI	CCCAGC	2 cut(s)	226, 331
HaeII	RGCGCY	3 cut(s)	100, 328, 404
HaeIII	GGCC	6 cut(s)	153, 813, 956, 1132, 1319, 1680
HapII	CCGG	3 cut(s)	312, 807, 1076
HgaI	GACGC	2 cut(s)	79, 1577
HhaI	GCGC	4 cut(s)	99, 327, 403, 686
Hin1II	CATG	9 cut(s)	74, 152, 182, 633, 921, 1162, 1313, 1324, 1435
Hin6I	GCGC	4 cut(s)	97, 325, 401, 684
HinP1I	GCGC	4 cut(s)	97, 325, 401, 684
HincII	GTYRAC	3 cut(s)	57, 967, 1291
HindII	GTYRAC	3 cut(s)	57, 967, 1291
HindIII	AAGCTT	1 cut(s)	1169
HinfI	GANTC	8 cut(s)	14, 23, 38, 859, 1046, 1202, 1353, 1625
HpaI	GTTAAC	1 cut(s)	967
HpaII	CCGG	3 cut(s)	312, 807, 1076
HphI	GGTGA	6 cut(s)	389, 661, 816, 1133, 1392, 1486
Hpy166II	GTNNAC	7 cut(s)	57, 915, 967, 1001, 1139, 1252, 1291
Hpy188I	TCNGA	6 cut(s)	22, 80, 219, 279, 762, 1201
Hpy188III	TCNNGA	9 cut(s)	238, 259, 406, 473, 908, 1180, 1432, 1543, 1629
Hpy8I	GTNNAC	7 cut(s)	57, 915, 967, 1001, 1139, 1252, 1291
Hpy99I	CGWCG	2 cut(s)	95, 1562
HpyAV	CCTTC	2 cut(s)	470, 1651
HpyCH4III	ACNGT	3 cut(s)	172, 587, 1121
HpyCH4IV	ACGT	4 cut(s)	594, 696, 969, 1233
HpyCH4V	TGCA	8 cut(s)	374, 639, 693, 712, 732, 777, 1154, 1711
HpyF10VI	GCNNNNNNNGC	7 cut(s)	96, 103, 398, 681, 690, 724, 1705
HpyF3I	CTNAG	3 cut(s)	27, 228, 276
HpySE526I	ACGT	4 cut(s)	594, 696, 969, 1233
Hsp92II	CATG	9 cut(s)	74, 152, 182, 633, 921, 1162, 1313, 1324, 1435
HspAI	GCGC	4 cut(s)	97, 325, 401, 684
KpnI	GGTACC	1 cut(s)	1308
KroI	GCCGGC	1 cut(s)	806
KroNI	GCCGGC	1 cut(s)	808
Ksp22I	TGATCA	1 cut(s)	145
KspAI	GTTAAC	1 cut(s)	967
Kzo9I	GATC	8 cut(s)	75, 80, 145, 234, 829, 1078, 1188, 1498
LmnI	GCTCC	2 cut(s)	219, 847
Lsp1109I	GCAGC	5 cut(s)	90, 122, 151, 436, 1695
LweI	GCATC	6 cut(s)	106, 252, 295, 361, 764, 1701
MaeI	CTAG	3 cut(s)	1128, 1437, 1502
MaeII	ACGT	4 cut(s)	594, 696, 969, 1233
MaeIII	GTNAC	4 cut(s)	590, 822, 1121, 1259
MalI	GATC	8 cut(s)	77, 82, 147, 236, 831, 1080, 1190, 1500
MboI	GATC	8 cut(s)	75, 80, 145, 234, 829, 1078, 1188, 1498
MboII	GAAGA	4 cut(s)	9, 392, 521, 1583
MflI	RGATCY	3 cut(s)	75, 1078, 1188
MhlI	GDGCHC	2 cut(s)	844, 1166
MlsI	TGGCCA	1 cut(s)	153
MluNI	TGGCCA	1 cut(s)	153
MlyI	GAGTC	2 cut(s)	868, 1362
MmeI	TCCRAC	1 cut(s)	87
Mox20I	TGGCCA	1 cut(s)	153
MreI	CGCCGGCG	1 cut(s)	806
MroNI	GCCGGC	1 cut(s)	806
MroXI	GAANNNNTTC	1 cut(s)	513
MscI	TGGCCA	1 cut(s)	153
MseI	TTAA	8 cut(s)	210, 366, 491, 966, 1053, 1371, 1392, 1729
MslI	CAYNNNNRTG	1 cut(s)	183
Msp20I	TGGCCA	1 cut(s)	153
MspA1I	CMGCKG	1 cut(s)	449
MspI	CCGG	3 cut(s)	312, 807, 1076
MspR9I	CCNGG	6 cut(s)	155, 815, 1134, 1194, 1652, 1676
MvaI	CCWGG	6 cut(s)	155, 815, 1134, 1194, 1652, 1676
MvnI	CGCG	1 cut(s)	43
MwoI	GCNNNNNNNGC	7 cut(s)	96, 103, 398, 681, 690, 724, 1705
NaeI	GCCGGC	1 cut(s)	808
NdeI	CATATG	1 cut(s)	496
NdeII	GATC	8 cut(s)	75, 80, 145, 234, 829, 1078, 1188, 1498
NgoMIV	GCCGGC	1 cut(s)	806
NlaIII	CATG	9 cut(s)	74, 152, 182, 633, 921, 1162, 1313, 1324, 1435
NlaIV	GGNNCC	5 cut(s)	1068, 1080, 1165, 1306, 1700
NmeAIII	GCCGAG	2 cut(s)	882, 909
NmuCI	GTSAC	3 cut(s)	822, 1121, 1259
PaeR7I	CTCGAG	3 cut(s)	837, 1180, 1534
PagI	TCATGA	1 cut(s)	1431
PaqCI	CACCTGC	2 cut(s)	365, 680
PceI	AGGCCT	1 cut(s)	1132
PcsI	WCGNNNNNNNCGW	2 cut(s)	591, 1541
PdiI	GCCGGC	1 cut(s)	808
PdmI	GAANNNNTTC	1 cut(s)	513
PfeI	GAWTC	6 cut(s)	14, 23, 38, 1046, 1202, 1625
PflMI	CCANNNNNTGG	2 cut(s)	452, 1414
PinAI	ACCGGT	1 cut(s)	311
PkrI	GCNGC	7 cut(s)	105, 137, 166, 451, 677, 812, 1710
PleI	GAGTC	2 cut(s)	867, 1361
PpsI	GAGTC	2 cut(s)	867, 1361
PshAI	GACNNNNGTC	1 cut(s)	1257
Psp124BI	GAGCTC	1 cut(s)	844
Psp1406I	AACGTT	1 cut(s)	969
Psp6I	CCWGG	6 cut(s)	153, 813, 1132, 1192, 1650, 1674
PspEI	GGTNACC	1 cut(s)	1121
PspFI	CCCAGC	2 cut(s)	222, 327
PspGI	CCWGG	6 cut(s)	153, 813, 1132, 1192, 1650, 1674
PspN4I	GGNNCC	5 cut(s)	1068, 1080, 1165, 1306, 1700
PspPI	GGNCC	3 cut(s)	817, 955, 1678
PspXI	VCTCGAGB	2 cut(s)	837, 1534
PstI	CTGCAG	1 cut(s)	1713
PstNI	CAGNNNCTG	1 cut(s)	452
PsuI	RGATCY	3 cut(s)	75, 1078, 1188
PvuII	CAGCTG	1 cut(s)	449
RsaI	GTAC	4 cut(s)	356, 533, 1138, 1306
RsaNI	GTAC	4 cut(s)	355, 532, 1137, 1305
RseI	CAYNNNNRTG	1 cut(s)	183
SacI	GAGCTC	1 cut(s)	844
SalI	GTCGAC	2 cut(s)	55, 1289
SaqAI	TTAA	8 cut(s)	210, 366, 491, 966, 1053, 1371, 1392, 1729
SatI	GCNGC	7 cut(s)	104, 136, 165, 450, 676, 811, 1709
Sau3AI	GATC	8 cut(s)	75, 80, 145, 234, 829, 1078, 1188, 1498
Sau96I	GGNCC	3 cut(s)	817, 955, 1678
SchI	GAGTC	2 cut(s)	868, 1362
ScrFI	CCNGG	6 cut(s)	155, 815, 1134, 1194, 1652, 1676
SduI	GDGCHC	2 cut(s)	844, 1166
SfaNI	GCATC	6 cut(s)	106, 252, 295, 361, 764, 1701
SfcI	CTRYAG	1 cut(s)	1709
Sfr274I	CTCGAG	3 cut(s)	837, 1180, 1534
SgrAI	CRCCGGYG	1 cut(s)	806
SinI	GGWCC	1 cut(s)	817
SlaI	CTCGAG	3 cut(s)	837, 1180, 1534
SmiMI	CAYNNNNRTG	1 cut(s)	183
SmlI	CTYRAG	5 cut(s)	406, 608, 837, 1180, 1534
SmoI	CTYRAG	5 cut(s)	406, 608, 837, 1180, 1534
SseBI	AGGCCT	1 cut(s)	1132
SsiI	CCGC	6 cut(s)	286, 601, 676, 810, 942, 1403
SspI	AATATT	1 cut(s)	892
SspMI	CTAG	3 cut(s)	1128, 1437, 1502
SstI	GAGCTC	1 cut(s)	844
StuI	AGGCCT	1 cut(s)	1132
StyD4I	CCNGG	6 cut(s)	153, 813, 1132, 1192, 1650, 1674
StyI	CCWWGG	2 cut(s)	735, 1127
TaaI	ACNGT	3 cut(s)	172, 587, 1121
TaiI	ACGT	4 cut(s)	597, 699, 972, 1236
TaqI	TCGA	8 cut(s)	56, 93, 617, 838, 1044, 1181, 1290, 1535
TaqII	GACCGA	1 cut(s)	50
TauI	GCSGC	2 cut(s)	678, 813
TfiI	GAWTC	6 cut(s)	14, 23, 38, 1046, 1202, 1625
Tru1I	TTAA	8 cut(s)	210, 366, 491, 966, 1053, 1371, 1392, 1729
Tru9I	TTAA	8 cut(s)	210, 366, 491, 966, 1053, 1371, 1392, 1729
TscAI	CASTG	3 cut(s)	148, 175, 1110
TseFI	GTSAC	3 cut(s)	822, 1121, 1259
TseI	GCWGC	5 cut(s)	103, 135, 164, 449, 1708
Tsp45I	GTSAC	3 cut(s)	822, 1121, 1259
TspDTI	ATGAA	2 cut(s)	167, 453
TspRI	CASTG	3 cut(s)	148, 175, 1110
Van91I	CCANNNNNTGG	2 cut(s)	452, 1414
VpaK11BI	GGWCC	1 cut(s)	817
XapI	RAATTY	1 cut(s)	795
XhoI	CTCGAG	3 cut(s)	837, 1180, 1534
XmaJI	CCTAGG	1 cut(s)	1127
XmiI	GTMKAC	2 cut(s)	56, 1290
XmnI	GAANNNNTTC	1 cut(s)	513
XspI	CTAG	3 cut(s)	1128, 1437, 1502

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.