Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0000753

Physical Location & Seq

Genomic Coordinates Forward (+)

64680121 .. 64681845

Gene Structure 1725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG435500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGAGCACACGACGGCAGCCAATTCCAACACCGATGAGATCCGATCCCTACGCGTCGAGGGCTTGCTGCCAGAGATGGATGCGAAATATCTCTATGGCTGCTTCAGTGATCACGGCCAGGTTGTAGCTGCCACTGTTTTGCATAATGTGAGAACTGGTTTTGTTGAGTTTACTTCTCGGAGCTGGGCTGAGATGATCTTGAAGTCCTACAATGGTCACGGGATGCCAAACTTCAATCAGAGATACCGCCTGAAATGGGATATTTATTCTGCGGGTATGATGTGGCGCTGGGATTATGCTTACGAGCGTTGTTCGTACTTTGGTTTTAATGATGCAGGTAGAGAATTGAACGCCAACAAAGCGCTCTTGAGATACAAGCACTTGATACCTGCTGTAAATGAAAAGCCAGCTGCTGCTGCTGGTCAGCAACATCAGGAAGGTGAGTCTGATTTAGTAAATCAGAATTGTGAAGCGATTCTCTACGAGGAGTGGTGCAAGGAGAGGTTTCTGTATCTATGTATGGAGGAATTGTGTGCGGAAACAGACGGTTGTTACGTTATCCGCACCCTCAAGTTGTCGAACTTGTTGTCATGCTCTTGCAAGTTTGATGAAAAGATTGGAAAAATAATCACCTGCCGCCATTGCGCCTCCTGCAACGTGCCATTTGAATTGCAAAAGCGGGCTTGGCTACGCACCACGGACTTCCGCAGCAAGAACATGAAAATTCCGGAGCAAATGGGTTGCGCTTCTTATTCTGGAGGAATCATGTTCGCCGGCGGCCTGGACGAATCACCAGATCAAACTCAAGCTCCTTACTTTGGGCCGAGTCGAAAATGTTATTTTTTTAAGCCGGGAGATATTTCCAACGATGATCCCGACTGGATAAGGCTTCCTTCCGATATCAAAAGCGGGAAACCGGAGGCCCTGCTGGTTAACGTTGATGGAAGTCTCTATTGTCTCTCTGGTTTACTCATTTATCAGCCTGTCGTTCATCCTACTTTTGAGGTGTACAATCGCGATTACGGGAGATGGGTGCCTCTGCCGGATCCTCCTTTTTACAGACCCGAAGCACTAAATTACAAACACGGTGACCCTAGGCCTGGTACACACTTGTCTTATGCAATCATGGGCACCAAGCTTTTGGTCTCGAGCAAAATCCCTGGTTCAGATTCCCCTCACTTTCCCGTTTGTTGCTTTGACGTTGAGGAAAAAAAGTGGACAGAGGTCACTGCCTTGTTCAATGGTAAGCCTTTTCCCTTCCGACGAGGGGCTTTAGTGGTCGACTTGGAGGATGGTACACATGATAAGGTCATGTTTTACTTCAATAATTATTTTGCTATAAGAGTCTGCCGATTAGTAGTTAATGAGGATGATGGTAGTATTAAGAACTCACCGCACCAATCTCTGGGGATTGATACCCTCATGACTAGCTTATTGGAAATTACCATTCGAAATCAGTCAATGGTGAAAATGTCGTGGCATTTTGTTGATCTAGGAAATAAAAAAGTCTGCTTTGTTTTGTCCTCGAGCCTCCCGAAAGGCAGAGACGACGACGAGTGTTTCTGTCATCGCCAGACCTTGCGTCTTCTTATCTTGGTAATTCAATTTCAAGTTTTGGAATCAGGAGATTTCTCCTTCAAGTTCCTGGCTACTCGCACCTTTGAATACCAGGGCCATTTCCCTCGCATCTGGCACCCCAAGCTGCAGGGTTGCTTTCTGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00020 ko00190 ko01100 ko01110 ko01120 ko01130 ko01200 ko03015 ko03040 ko04714 ko04932 ko05010 ko05012 ko05016 map00020 map00190 map01100 map01110 map01120 map01130 map01200 map03015 map03040 map04714 map04932 map05010 map05012 map05016

Pfam Domains

Protein Families

RRM_1

Protein Analysis

574

Amino Acids

65.75

Weight (kDa)

6.5

Isoelectric Point (pI)

38.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1668	PF07893	297 - 427	4.9e-08	Protein of unknown function (DUF1668)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000753)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g26720 FvH4_7g27001 FvH4_7g27001 FvH4_7g27001 FvH4_7g31210 FvH4_7g31211 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31310 FvH4_7g31320 FvH4_7g31670 FvH4_7g31670 FvH4_7g31681 FvH4_7g31682
rosa_chinensis	RchiOBHm_Chr1g0337091 RchiOBHm_Chr1g0337131 RchiOBHm_Chr1g0380941
rosa_laevigata	RLG00000026258 RLG00000026260 RLG00000026268 RLG00000026269 RLG00000029305
rosa_multiflora	Rmu_co8190652.1_g000001 Rmu_co8273449.1_g000001 Rmu_co8310417.1_g000001 Rmu_sc0002160.1_g000028 Rmu_sc0002160.1_g000031 Rmu_sc0002962.1_g000022 Rmu_sc0004623.1_g000006 Rmu_sc0004623.1_g000007 Rmu_sc0013826.1_g000002 Rmu_sc0013826.1_g000003 Rmu_sc0020974.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105360 Rroxscaffold_4G00314970 Rroxscaffold_6G00413200
rosa_rugosa	Rorug01G0131100 Rorug01G0423200 Rorug01G0424100
rosa_samantha	Rh1AG151800 Rh1AG152100 Rh1AG447500 Rh1AG447600 Rh1AG448600 Rh1AG449500 Rh1AG449700 Rh1BG119600 Rh1BG404200 Rh1BG405400 Rh1CG143000 Rh1CG418300 Rh1DG159000 Rh1DG159300 Rh1DG159400 Rh1DG434600 Rh1DG435500 Rh1DG435900
rosa_wichuraiana	Rw0G005920 Rw0G005960 Rw0G005970 Rw1G012410 Rw1G012420 Rw1G038950 Rw1G039110 Rw1G039170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	641
Acc36I	ACCTGC	3 cut(s)	326, 397, 641
AccB1I	GGYRCC	3 cut(s)	1033, 1130, 1692
AccB7I	CCANNNNNTGG	1 cut(s)	1405
AccI	GTMKAC	1 cut(s)	1281
AccII	CGCG	2 cut(s)	54, 1017
AccIII	TCCGGA	1 cut(s)	727
AclI	AACGTT	1 cut(s)	936
AclWI	GGATC	5 cut(s)	34, 39, 866, 1040, 1053
AcoI	YGGCCR	1 cut(s)	115
AcsI	RAATTY	1 cut(s)	723
AcuI	CTGAAG	1 cut(s)	88
AfaI	GTAC	4 cut(s)	317, 1010, 1105, 1297
AfeI	AGCGCT	1 cut(s)	363
AfiI	CCNNNNNNNGG	5 cut(s)	256, 818, 1100, 1267, 1405
AflIII	ACRYGT	1 cut(s)	52
AhdI	GACNNNNNGTC	1 cut(s)	1581
AjnI	CCWGG	6 cut(s)	117, 780, 1099, 1159, 1644, 1668
AluBI	AGCT	7 cut(s)	128, 183, 410, 809, 1138, 1431, 1702
AluI	AGCT	7 cut(s)	128, 183, 410, 809, 1138, 1431, 1702
Alw21I	GWGCWC	1 cut(s)	9
Alw26I	GTCTC	4 cut(s)	953, 962, 1150, 1539
AlwI	GGATC	5 cut(s)	34, 39, 866, 1040, 1053
AlwNI	CAGNNNCTG	1 cut(s)	413
Ama87I	CYCGRG	2 cut(s)	1147, 1525
Aor13HI	TCCGGA	1 cut(s)	727
Aor51HI	AGCGCT	1 cut(s)	363
AoxI	GGCC	6 cut(s)	115, 778, 821, 921, 1097, 1672
ApeKI	GCWGC	9 cut(s)	17, 67, 99, 128, 410, 413, 416, 708, 1702
ApoI	RAATTY	1 cut(s)	723
ArsI	GACNNNNNNTTYG	2 cut(s)	572, 604
Asp700I	GAANNNNTTC	1 cut(s)	474
AspA2I	CCTAGG	1 cut(s)	1094
AspLEI	GCGC	4 cut(s)	288, 364, 647, 746
AspS9I	GGNCC	3 cut(s)	821, 922, 1672
AsuC2I	CCSGG	1 cut(s)	852
AsuHPI	GGTGA	6 cut(s)	452, 622, 783, 1100, 1383, 1477
AsuII	TTCGAA	1 cut(s)	1450
AvaI	CYCGRG	2 cut(s)	1147, 1525
AvrII	CCTAGG	1 cut(s)	1094
BaeGI	GKGCMC	1 cut(s)	1133
BamHI	GGATCC	1 cut(s)	1045
BanI	GGYRCC	3 cut(s)	1033, 1130, 1692
BbsI	GAAGAC	1 cut(s)	1577
Bbv12I	GWGCWC	1 cut(s)	9
BbvI	GCAGC	9 cut(s)	29, 54, 86, 115, 397, 400, 403, 720, 1689
BccI	CCATC	5 cut(s)	70, 935, 1023, 1286, 1367
BceAI	ACGGC	2 cut(s)	30, 130
BciT130I	CCWGG	6 cut(s)	119, 782, 1101, 1161, 1646, 1670
BclI	TGATCA	1 cut(s)	109
BcnI	CCSGG	1 cut(s)	852
BcoDI	GTCTC	4 cut(s)	953, 962, 1150, 1539
BfaI	CTAG	3 cut(s)	1095, 1428, 1493
BfmI	CTRYAG	1 cut(s)	1703
BfoI	RGCGCY	2 cut(s)	289, 365
BfuAI	ACCTGC	3 cut(s)	326, 397, 641
BlnI	CCTAGG	1 cut(s)	1094
Bme1390I	CCNGG	7 cut(s)	119, 782, 852, 1101, 1161, 1646, 1670
BmeRI	GACNNNNNGTC	1 cut(s)	1581
BmeT110I	CYCGRG	2 cut(s)	1147, 1525
BmgT120I	GGNCC	3 cut(s)	821, 922, 1672
BmiI	GGNNCC	4 cut(s)	1035, 1047, 1132, 1694
BmrFI	CCNGG	7 cut(s)	119, 782, 852, 1101, 1161, 1646, 1670
BmsI	GCATC	4 cut(s)	70, 213, 322, 1695
BoxI	GACNNNNGTC	1 cut(s)	1223
BpiI	GAAGAC	1 cut(s)	1577
BpmI	CTGGAG	1 cut(s)	777
Bpu14I	TTCGAA	1 cut(s)	1450
BpuEI	CTTGAG	3 cut(s)	388, 554, 789
BpuMI	CCSGG	1 cut(s)	852
BsaI	GGTCTC	1 cut(s)	1150
BsaJI	CCNNGG	4 cut(s)	696, 1094, 1159, 1669
BsaWI	WCCGGW	2 cut(s)	727, 916
BsaXI	ACNNNNNCTCC	4 cut(s)	515, 545, 793, 823
Bsc4I	CCNNNNNNNGG	5 cut(s)	256, 818, 1100, 1267, 1405
Bse118I	RCCGGY	1 cut(s)	773
Bse1I	ACTGG	2 cut(s)	160, 884
Bse3DI	GCAATG	1 cut(s)	640
BseAI	TCCGGA	1 cut(s)	727
BseBI	CCWGG	6 cut(s)	119, 782, 1101, 1161, 1646, 1670
BseDI	CCNNGG	4 cut(s)	696, 1094, 1159, 1669
BseGI	GGATG	5 cut(s)	85, 228, 991, 1297, 1375
BseLI	CCNNNNNNNGG	5 cut(s)	256, 818, 1100, 1267, 1405
BseMI	GCAATG	1 cut(s)	640
BseMII	CTCAG	1 cut(s)	180
BseNI	ACTGG	2 cut(s)	160, 884
BseRI	GAGGAG	1 cut(s)	500
BseSI	GKGCMC	1 cut(s)	1133
BseXI	GCAGC	9 cut(s)	29, 54, 86, 115, 397, 400, 403, 720, 1689
BseYI	CCCAGC	2 cut(s)	183, 288
Bsh1236I	CGCG	2 cut(s)	54, 1017
BshFI	GGCC	6 cut(s)	117, 780, 823, 923, 1099, 1674
BshNI	GGYRCC	3 cut(s)	1033, 1130, 1692
BsiHKAI	GWGCWC	1 cut(s)	9
BsiHKCI	CYCGRG	2 cut(s)	1147, 1525
BsiSI	CCGG	5 cut(s)	728, 774, 851, 917, 1043
BslI	CCNNNNNNNGG	5 cut(s)	256, 818, 1100, 1267, 1405
BsmAI	GTCTC	4 cut(s)	953, 962, 1150, 1539
BsmBI	CGTCTC	1 cut(s)	1539
BsnI	GGCC	6 cut(s)	117, 780, 823, 923, 1099, 1674
Bso31I	GGTCTC	1 cut(s)	1150
BsoBI	CYCGRG	2 cut(s)	1147, 1525
Bsp119I	TTCGAA	1 cut(s)	1450
Bsp1286I	GDGCHC	2 cut(s)	9, 1133
Bsp13I	TCCGGA	1 cut(s)	727
Bsp1407I	TGTACA	1 cut(s)	1008
Bsp143I	GATC	8 cut(s)	39, 44, 109, 195, 796, 871, 1045, 1489
Bsp68I	TCGCGA	1 cut(s)	1017
BspANI	GGCC	6 cut(s)	117, 780, 823, 923, 1099, 1674
BspCNI	CTCAG	1 cut(s)	181
BspEI	TCCGGA	1 cut(s)	727
BspFNI	CGCG	2 cut(s)	54, 1017
BspHI	TCATGA	1 cut(s)	1422
BspLI	GGNNCC	4 cut(s)	1035, 1047, 1132, 1694
BspMAI	CTGCAG	1 cut(s)	1707
BspMI	ACCTGC	3 cut(s)	326, 397, 641
BspPI	GGATC	5 cut(s)	34, 39, 866, 1040, 1053
BspT104I	TTCGAA	1 cut(s)	1450
BspT107I	GGYRCC	3 cut(s)	1033, 1130, 1692
BspTNI	GGTCTC	1 cut(s)	1150
BsrDI	GCAATG	1 cut(s)	640
BsrFI	RCCGGY	1 cut(s)	773
BsrGI	TGTACA	1 cut(s)	1008
BsrI	ACTGG	2 cut(s)	160, 884
BssAI	RCCGGY	1 cut(s)	773
BssECI	CCNNGG	4 cut(s)	696, 1094, 1159, 1669
BssMI	GATC	8 cut(s)	39, 44, 109, 195, 796, 871, 1045, 1489
BssT1I	CCWWGG	1 cut(s)	1094
Bst2UI	CCWGG	6 cut(s)	119, 782, 1101, 1161, 1646, 1670
Bst4CI	ACNGT	3 cut(s)	136, 548, 1088
BstAUI	TGTACA	1 cut(s)	1008
BstBI	TTCGAA	1 cut(s)	1450
BstC8I	GCNNGC	4 cut(s)	65, 408, 681, 775
BstDEI	CTNAG	1 cut(s)	189
BstDSI	CCRYGG	1 cut(s)	696
BstEII	GGTNACC	1 cut(s)	1088
BstF5I	GGATG	5 cut(s)	85, 228, 991, 1297, 1375
BstFNI	CGCG	2 cut(s)	54, 1017
BstH2I	RGCGCY	2 cut(s)	289, 365
BstHHI	GCGC	4 cut(s)	288, 364, 647, 746
BstKTI	GATC	8 cut(s)	42, 47, 112, 198, 799, 874, 1048, 1492
BstMAI	GTCTC	4 cut(s)	953, 962, 1150, 1539
BstMBI	GATC	8 cut(s)	39, 44, 109, 195, 796, 871, 1045, 1489
BstMWI	GCNNNNNNNGC	7 cut(s)	60, 359, 416, 642, 651, 685, 1699
BstNI	CCWGG	6 cut(s)	119, 782, 1101, 1161, 1646, 1670
BstPAI	GACNNNNGTC	1 cut(s)	1223
BstPI	GGTNACC	1 cut(s)	1088
BstSCI	CCNGG	7 cut(s)	117, 780, 850, 1099, 1159, 1644, 1668
BstSFI	CTRYAG	1 cut(s)	1703
BstSLI	GKGCMC	1 cut(s)	1133
BstUI	CGCG	2 cut(s)	54, 1017
BstV1I	GCAGC	9 cut(s)	29, 54, 86, 115, 397, 400, 403, 720, 1689
BstV2I	GAAGAC	1 cut(s)	1577
BstX2I	RGATCY	2 cut(s)	39, 1045
BstXI	CCANNNNNNTGG	1 cut(s)	1141
BstYI	RGATCY	2 cut(s)	39, 1045
BsuRI	GGCC	6 cut(s)	117, 780, 823, 923, 1099, 1674
BtgI	CCRYGG	1 cut(s)	696
BtgZI	GCGATG	1 cut(s)	1553
BtsCI	GGATG	5 cut(s)	85, 228, 991, 1297, 1375
BtsI	GCAGTG	1 cut(s)	1227
BtsIMutI	CAGTG	3 cut(s)	112, 132, 1227
BtuMI	TCGCGA	1 cut(s)	1017
BveI	ACCTGC	3 cut(s)	326, 397, 641
Cac8I	GCNNGC	4 cut(s)	65, 408, 681, 775
CaiI	CAGNNNCTG	1 cut(s)	413
CciI	TCATGA	1 cut(s)	1422
CfoI	GCGC	4 cut(s)	288, 364, 647, 746
Cfr10I	RCCGGY	1 cut(s)	773
Cfr13I	GGNCC	3 cut(s)	821, 922, 1672
CseI	GACGC	2 cut(s)	43, 1571
Csp6I	GTAC	4 cut(s)	316, 1009, 1104, 1296
CviAII	CATG	7 cut(s)	591, 718, 766, 1126, 1301, 1312, 1423
CviQI	GTAC	4 cut(s)	316, 1009, 1104, 1296
DdeI	CTNAG	1 cut(s)	189
DpnI	GATC	8 cut(s)	41, 46, 111, 197, 798, 873, 1047, 1491
DpnII	GATC	8 cut(s)	39, 44, 109, 195, 796, 871, 1045, 1489
DriI	GACNNNNNGTC	1 cut(s)	1581
EaeI	YGGCCR	1 cut(s)	115
Eam1105I	GACNNNNNGTC	1 cut(s)	1581
Eco130I	CCWWGG	1 cut(s)	1094
Eco147I	AGGCCT	1 cut(s)	1099
Eco31I	GGTCTC	1 cut(s)	1150
Eco32I	GATATC	1 cut(s)	901
Eco47III	AGCGCT	1 cut(s)	363
Eco57I	CTGAAG	1 cut(s)	88
Eco88I	CYCGRG	2 cut(s)	1147, 1525
Eco91I	GGTNACC	1 cut(s)	1088
EcoO109I	RGGNCCY	1 cut(s)	922
EcoO65I	GGTNACC	1 cut(s)	1088
EcoRII	CCWGG	6 cut(s)	117, 780, 1099, 1159, 1644, 1668
EcoRV	GATATC	1 cut(s)	901
EcoT14I	CCWWGG	1 cut(s)	1094
ErhI	CCWWGG	1 cut(s)	1094
Esp3I	CGTCTC	1 cut(s)	1539
FaeI	CATG	7 cut(s)	594, 721, 769, 1129, 1304, 1315, 1426
FalI	AAGNNNNNCTT	2 cut(s)	877, 909
FatI	CATG	7 cut(s)	590, 717, 765, 1125, 1300, 1311, 1422
FauI	CCCGC	3 cut(s)	265, 672, 902
FbaI	TGATCA	1 cut(s)	109
FblI	GTMKAC	1 cut(s)	1281
FokI	GGATG	5 cut(s)	92, 235, 978, 1304, 1382
FspBI	CTAG	3 cut(s)	1095, 1428, 1493
GlaI	GCGC	4 cut(s)	287, 363, 646, 745
GsaI	CCCAGC	2 cut(s)	187, 292
GsuI	CTGGAG	1 cut(s)	777
HaeII	RGCGCY	2 cut(s)	289, 365
HaeIII	GGCC	6 cut(s)	117, 780, 823, 923, 1099, 1674
HapII	CCGG	5 cut(s)	728, 774, 851, 917, 1043
HgaI	GACGC	2 cut(s)	43, 1571
HhaI	GCGC	4 cut(s)	288, 364, 647, 746
Hin1II	CATG	7 cut(s)	594, 721, 769, 1129, 1304, 1315, 1426
Hin6I	GCGC	4 cut(s)	286, 362, 645, 744
HinP1I	GCGC	4 cut(s)	286, 362, 645, 744
HincII	GTYRAC	2 cut(s)	934, 1282
HindII	GTYRAC	2 cut(s)	934, 1282
HindIII	AAGCTT	1 cut(s)	1136
HinfI	GANTC	8 cut(s)	443, 475, 762, 788, 826, 1169, 1344, 1619
HpaI	GTTAAC	1 cut(s)	934
HpaII	CCGG	5 cut(s)	728, 774, 851, 917, 1043
HphI	GGTGA	6 cut(s)	452, 622, 783, 1100, 1383, 1477
Hpy166II	GTNNAC	8 cut(s)	171, 934, 968, 1009, 1106, 1218, 1282, 1298
Hpy188I	TCNGA	8 cut(s)	44, 180, 240, 448, 462, 898, 1168, 1262
Hpy8I	GTNNAC	8 cut(s)	171, 934, 968, 1009, 1106, 1218, 1282, 1298
Hpy99I	CGWCG	5 cut(s)	16, 59, 1266, 1553, 1556
HpyAV	CCTTC	4 cut(s)	431, 903, 1267, 1645
HpyCH4III	ACNGT	3 cut(s)	136, 548, 1088
HpyCH4IV	ACGT	4 cut(s)	555, 657, 936, 1200
HpyCH4V	TGCA	8 cut(s)	142, 335, 495, 600, 654, 673, 1121, 1705
HpyF10VI	GCNNNNNNNGC	7 cut(s)	60, 359, 416, 642, 651, 685, 1699
HpyF3I	CTNAG	1 cut(s)	189
HpySE526I	ACGT	4 cut(s)	555, 657, 936, 1200
Hsp92II	CATG	7 cut(s)	594, 721, 769, 1129, 1304, 1315, 1426
HspAI	GCGC	4 cut(s)	286, 362, 645, 744
Kpn2I	TCCGGA	1 cut(s)	727
KroI	GCCGGC	1 cut(s)	773
KroNI	GCCGGC	1 cut(s)	775
Ksp22I	TGATCA	1 cut(s)	109
KspAI	GTTAAC	1 cut(s)	934
Kzo9I	GATC	8 cut(s)	39, 44, 109, 195, 796, 871, 1045, 1489
LmnI	GCTCC	4 cut(s)	4, 180, 730, 814
Lsp1109I	GCAGC	9 cut(s)	29, 54, 86, 115, 397, 400, 403, 720, 1689
LweI	GCATC	4 cut(s)	70, 213, 322, 1695
MaeI	CTAG	3 cut(s)	1095, 1428, 1493
MaeII	ACGT	4 cut(s)	555, 657, 936, 1200
MaeIII	GTNAC	4 cut(s)	215, 551, 1088, 1225
MalI	GATC	8 cut(s)	41, 46, 111, 197, 798, 873, 1047, 1491
MboI	GATC	8 cut(s)	39, 44, 109, 195, 796, 871, 1045, 1489
MboII	GAAGA	1 cut(s)	1577
MflI	RGATCY	2 cut(s)	39, 1045
MhlI	GDGCHC	2 cut(s)	9, 1133
MluI	ACGCGT	1 cut(s)	52
MlyI	GAGTC	3 cut(s)	452, 835, 1353
MmeI	TCCRAC	3 cut(s)	51, 888, 1285
MreI	CGCCGGCG	1 cut(s)	773
MroI	TCCGGA	1 cut(s)	727
MroNI	GCCGGC	1 cut(s)	773
MroXI	GAANNNNTTC	1 cut(s)	474
MseI	TTAA	6 cut(s)	327, 846, 933, 1362, 1383, 1723
MspA1I	CMGCKG	1 cut(s)	410
MspI	CCGG	5 cut(s)	728, 774, 851, 917, 1043
MspR9I	CCNGG	7 cut(s)	119, 782, 852, 1101, 1161, 1646, 1670
MvaI	CCWGG	6 cut(s)	119, 782, 1101, 1161, 1646, 1670
MvnI	CGCG	2 cut(s)	54, 1017
MwoI	GCNNNNNNNGC	7 cut(s)	60, 359, 416, 642, 651, 685, 1699
NaeI	GCCGGC	1 cut(s)	775
NciI	CCSGG	1 cut(s)	852
NdeII	GATC	8 cut(s)	39, 44, 109, 195, 796, 871, 1045, 1489
NgoMIV	GCCGGC	1 cut(s)	773
NlaIII	CATG	7 cut(s)	594, 721, 769, 1129, 1304, 1315, 1426
NlaIV	GGNNCC	4 cut(s)	1035, 1047, 1132, 1694
NmeAIII	GCCGAG	1 cut(s)	849
NmuCI	GTSAC	3 cut(s)	215, 1088, 1225
NruI	TCGCGA	1 cut(s)	1017
NspV	TTCGAA	1 cut(s)	1450
PaeR7I	CTCGAG	2 cut(s)	1147, 1525
PagI	TCATGA	1 cut(s)	1422
PaqCI	CACCTGC	1 cut(s)	641
PceI	AGGCCT	1 cut(s)	1099
PcsI	WCGNNNNNNNCGW	3 cut(s)	552, 873, 1532
PdiI	GCCGGC	1 cut(s)	775
PdmI	GAANNNNTTC	1 cut(s)	474
PfeI	GAWTC	5 cut(s)	475, 762, 788, 1169, 1619
PflMI	CCANNNNNTGG	1 cut(s)	1405
PleI	GAGTC	3 cut(s)	451, 834, 1352
PpsI	GAGTC	3 cut(s)	451, 834, 1352
PshAI	GACNNNNGTC	1 cut(s)	1223
Psp1406I	AACGTT	1 cut(s)	936
Psp6I	CCWGG	6 cut(s)	117, 780, 1099, 1159, 1644, 1668
PspEI	GGTNACC	1 cut(s)	1088
PspFI	CCCAGC	2 cut(s)	183, 288
PspGI	CCWGG	6 cut(s)	117, 780, 1099, 1159, 1644, 1668
PspN4I	GGNNCC	4 cut(s)	1035, 1047, 1132, 1694
PspPI	GGNCC	3 cut(s)	821, 922, 1672
PspXI	VCTCGAGB	1 cut(s)	1525
PstI	CTGCAG	1 cut(s)	1707
PstNI	CAGNNNCTG	1 cut(s)	413
PsuI	RGATCY	2 cut(s)	39, 1045
PvuII	CAGCTG	1 cut(s)	410
RruI	TCGCGA	1 cut(s)	1017
RsaI	GTAC	4 cut(s)	317, 1010, 1105, 1297
RsaNI	GTAC	4 cut(s)	316, 1009, 1104, 1296
SalI	GTCGAC	1 cut(s)	1280
SaqAI	TTAA	6 cut(s)	327, 846, 933, 1362, 1383, 1723
Sau3AI	GATC	8 cut(s)	39, 44, 109, 195, 796, 871, 1045, 1489
Sau96I	GGNCC	3 cut(s)	821, 922, 1672
SchI	GAGTC	3 cut(s)	452, 835, 1353
ScrFI	CCNGG	7 cut(s)	119, 782, 852, 1101, 1161, 1646, 1670
SduI	GDGCHC	2 cut(s)	9, 1133
SfaNI	GCATC	4 cut(s)	70, 213, 322, 1695
SfcI	CTRYAG	1 cut(s)	1703
Sfr274I	CTCGAG	2 cut(s)	1147, 1525
SfuI	TTCGAA	1 cut(s)	1450
SgrAI	CRCCGGYG	1 cut(s)	773
SlaI	CTCGAG	2 cut(s)	1147, 1525
SmlI	CTYRAG	5 cut(s)	367, 569, 804, 1147, 1525
SmoI	CTYRAG	5 cut(s)	367, 569, 804, 1147, 1525
SseBI	AGGCCT	1 cut(s)	1099
SspMI	CTAG	3 cut(s)	1095, 1428, 1493
StuI	AGGCCT	1 cut(s)	1099
StyD4I	CCNGG	7 cut(s)	117, 780, 850, 1099, 1159, 1644, 1668
StyI	CCWWGG	1 cut(s)	1094
TaaI	ACNGT	3 cut(s)	136, 548, 1088
TaiI	ACGT	4 cut(s)	558, 660, 939, 1203
TaqI	TCGA	7 cut(s)	57, 578, 829, 1148, 1281, 1450, 1526
TatI	WGTACW	1 cut(s)	1008
TauI	GCSGC	2 cut(s)	639, 780
TfiI	GAWTC	5 cut(s)	475, 762, 788, 1169, 1619
Tru1I	TTAA	6 cut(s)	327, 846, 933, 1362, 1383, 1723
Tru9I	TTAA	6 cut(s)	327, 846, 933, 1362, 1383, 1723
TscAI	CASTG	3 cut(s)	112, 139, 1234
TseFI	GTSAC	3 cut(s)	215, 1088, 1225
TseI	GCWGC	9 cut(s)	17, 67, 99, 128, 410, 413, 416, 708, 1702
Tsp45I	GTSAC	3 cut(s)	215, 1088, 1225
TspDTI	ATGAA	4 cut(s)	414, 624, 734, 980
TspGWI	ACGGA	1 cut(s)	713
TspRI	CASTG	3 cut(s)	112, 139, 1234
Van91I	CCANNNNNTGG	1 cut(s)	1405
XapI	RAATTY	1 cut(s)	723
XhoI	CTCGAG	2 cut(s)	1147, 1525
XmaJI	CCTAGG	1 cut(s)	1094
XmiI	GTMKAC	1 cut(s)	1281
XmnI	GAANNNNTTC	1 cut(s)	474
XspI	CTAG	3 cut(s)	1095, 1428, 1493

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.