Rw0G005960

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00234
OG0000753
Physical Location & Seq
Forward (+)
170637 .. 172489
1853 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G005960.1

Sequence Viewer

Length: 1758 bp
ATGCATCGCCTTGATTCTTCTGATTCTAAGGAGACCGATTCGCGTATCGTCAAGTCGACTTCCAACACCCATGAGATCCGATCCCTACGCGTCGAGGGCTTGCTGCCAGAGATGGATGCGAAATATCTCTATGGCTGCTTCAGTGATCATGGCCAGGTTGTAGCTGCCACTGTTATTGATAGTAATGTTAATGTGAGAACTGGTTTTGTTGAGTTTACTTCTCGGAGCTGGGCTAAGATGATCTTGAAGTCCTACAATGGTCTCGGGATGCCAAACTTCAATCAGATATACCGCCTGAAATGGGATATGGATTCTACCGGTATGATGTGGCGCTGGGATTATGCTTACGAGCGTTGTTCGTACTTTGGTTTTAATGATGCAGGTGAAGAATTGAACGCCAACAAAGCGCTCTTGAGATACAAGCACTTGATACCTGCTGTAAATGAAAAACCAGCTGCTGCTGCTGGTCAGCAACATCTGGAAGGTGCGTCTGCGTTAATATATAAGACAGTTGAAAGGATTGGCTACGAGAACTGGTACGACAGCAGGTTTCTGTATCTATGTATGGAGGAATTGTGTGCGGAAATAGATGGTTGTTACGTTATCCGCACCCTCAAGTTGTCGAACTTATTGTTATGCTCTTGCAAGTTTGATAAAAAGATTGGGAATATAATCACCTGCCGCTATTGTGCCAACTGCAGCGTGCCATTTGAACTGCAAAAGCAGGCTTGGCTATGCACCAAGGACTTCGGCAAAAGTCCGAGTCTTATGGGATGCACTTCTCATTGCAACGCAATTGTGTTCGCCGGCGGCCTGGACCAGTCACCAGATCAAACTCAAGCTCCTTACTATGTGCCAAGTCAAGAATGTTATCTTTTTAAGCCGAGAAATTTTTATAACGATTGTCCCCACTTGGTGAGGCATCCTTCCTATCTCACAAGGGGGAAACCGGAGGCCCTGCTGGTTAACGTTGATGAAAGTCTTTATTGTCTCTCTGGTTTAGTCATTGGTCAGGATGTCGTTCATCCTACCTTTGAGGTGTACCTTACCAATCCAGGGATGTGGGTGCCTCTGCCGGATCCTCCTTTTTACACACCCGAAGCACTGAACTACAAACGCGGTGACCCTAGGGCTGGTACACACTTGTCTTATGCAATCATGGGCACCAAGCTTTTGGTCTCGAGCAAGATACCTGGTACAGGTTCCTGCCCTCACTTTCCCGTTTGTTGCTTTGACGTTAAGGAAAAAAAGTGGACAGAGGTCACTACCTTGTTCAATGGTAAGCCTTTTCCCTTCCGACATGGGGCTTTAGTGGTCGACTTGGAGGATGGTACCCATGATAAGGTCATGTTTTACTTCAATAATTATTTTGCTATAAGAGCCTGCCGATTAGTAGTTAATGAGGATGATGGTAGTATTAAGAACTCATCCCCCCAATCTTTGGGGATCGATTCCCTCATGACTAGCTTATTGGAAATAACCATTCGAAATCAGTCAATGGTAAGAATGTCGTGGGATTTTGTTGATCTAGGAAATAAAAAAGTCTGCTTTGTTTTGTCCTCGAGCCTCCCGAAAGTTAGAGACGACGAGAGCGCCACTCATCGCCAGACAATTCGTCTTCTTGTCTTGGTAATTCAATTTCAAGTTTTGGAGTCGGGAGATTTCTCCTTCAAGTTCCTGGCTACTCGCACCTTTGAATACCAGGGCCATTTCCCTTTCATCTGTCACCCTAGGCTGCAGCGTTGCTTTCTGCTTTAA

Protein Analysis

585

Amino Acids

66.57

Weight (kDa)

7.18

Isoelectric Point (pI)

41.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 307 - 524 1.6e-07 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 897
AarI CACCTGC 2 cut(s) 371, 686
Acc36I ACCTGC 4 cut(s) 371, 442, 537, 686
Acc65I GGTACC 1 cut(s) 1331
AccB1I GGYRCC 3 cut(s) 1066, 1163, 1331
AccB7I CCANNNNNTGG 1 cut(s) 1441
AccI GTMKAC 2 cut(s) 56, 1317
AccII CGCG 3 cut(s) 43, 90, 1119
AciI CCGC 6 cut(s) 292, 581, 607, 682, 810, 1119
AclI AACGTT 1 cut(s) 969
AclWI GGATC 5 cut(s) 70, 75, 1073, 1086, 1454
AcoI YGGCCR 1 cut(s) 151
AcsI RAATTY 1 cut(s) 889
AcuI CTGAAG 1 cut(s) 124
AdeI CACNNNGTG 1 cut(s) 916
AfaI GTAC 6 cut(s) 362, 539, 1043, 1138, 1198, 1333
AfeI AGCGCT 1 cut(s) 408
AfiI CCNNNNNNNGG 7 cut(s) 301, 1056, 1133, 1199, 1303, 1342, 1441
AflIII ACRYGT 1 cut(s) 88
AgeI ACCGGT 1 cut(s) 317
AhdI GACNNNNNGTC 1 cut(s) 1614
AjnI CCWGG 6 cut(s) 153, 813, 1054, 1192, 1677, 1701
AluBI AGCT 6 cut(s) 164, 228, 455, 842, 1171, 1467
AluI AGCT 6 cut(s) 164, 228, 455, 842, 1171, 1467
Alw26I GTCTC 5 cut(s) 26, 266, 995, 1183, 1575
AlwI GGATC 5 cut(s) 70, 75, 1073, 1086, 1454
AlwNI CAGNNNCTG 1 cut(s) 458
Ama87I CYCGRG 3 cut(s) 263, 1180, 1561
Aor51HI AGCGCT 1 cut(s) 408
AoxI GGCC 4 cut(s) 151, 811, 954, 1705
ApeKI GCWGC 9 cut(s) 103, 135, 164, 455, 458, 461, 699, 1735, 1738
ApoI RAATTY 1 cut(s) 889
AsiGI ACCGGT 1 cut(s) 317
Asp718I GGTACC 1 cut(s) 1331
AspA2I CCTAGG 2 cut(s) 1127, 1730
AspLEI GCGC 3 cut(s) 333, 409, 1595
AspS9I GGNCC 3 cut(s) 817, 955, 1705
AsuHPI GGTGA 6 cut(s) 395, 667, 816, 928, 1133, 1718
AsuII TTCGAA 1 cut(s) 1486
AvaI CYCGRG 3 cut(s) 263, 1180, 1561
AvaII GGWCC 1 cut(s) 817
AvrII CCTAGG 2 cut(s) 1127, 1730
BaeGI GKGCMC 1 cut(s) 1166
BalI TGGCCA 1 cut(s) 153
BamHI GGATCC 1 cut(s) 1078
BanI GGYRCC 3 cut(s) 1066, 1163, 1331
BbsI GAAGAC 1 cut(s) 1610
BbvI GCAGC 9 cut(s) 90, 122, 151, 442, 445, 448, 711, 1722, 1750
BccI CCATC 4 cut(s) 106, 584, 1322, 1403
BciT130I CCWGG 6 cut(s) 155, 815, 1056, 1194, 1679, 1703
BclI TGATCA 1 cut(s) 145
BcoDI GTCTC 5 cut(s) 26, 266, 995, 1183, 1575
BfaI CTAG 4 cut(s) 1128, 1464, 1529, 1731
BfmI CTRYAG 2 cut(s) 697, 1736
BfoI RGCGCY 3 cut(s) 334, 410, 1596
BfuAI ACCTGC 4 cut(s) 371, 442, 537, 686
BlnI CCTAGG 2 cut(s) 1127, 1730
Bme1390I CCNGG 6 cut(s) 155, 815, 1056, 1194, 1679, 1703
Bme18I GGWCC 1 cut(s) 817
BmeRI GACNNNNNGTC 1 cut(s) 1614
BmeT110I CYCGRG 3 cut(s) 263, 1180, 1561
BmgT120I GGNCC 3 cut(s) 817, 955, 1705
BmiI GGNNCC 5 cut(s) 1068, 1080, 1165, 1204, 1333
BmrFI CCNGG 6 cut(s) 155, 815, 1056, 1194, 1679, 1703
BmsI GCATC 6 cut(s) 13, 106, 258, 367, 764, 931
BoxI GACNNNNGTC 1 cut(s) 1259
BpiI GAAGAC 1 cut(s) 1610
BplI GAGNNNNNCTC 2 cut(s) 1582, 1614
Bpu14I TTCGAA 1 cut(s) 1486
BpuEI CTTGAG 3 cut(s) 433, 599, 822
Bsa29I ATCGAT 1 cut(s) 1449
BsaI GGTCTC 3 cut(s) 26, 266, 1183
BsaJI CCNNGG 5 cut(s) 741, 1055, 1127, 1702, 1730
BsaWI WCCGGW 2 cut(s) 317, 949
BsaXI ACNNNNNCTCC 4 cut(s) 560, 590, 826, 856
Bsc4I CCNNNNNNNGG 7 cut(s) 301, 1056, 1133, 1199, 1303, 1342, 1441
Bse118I RCCGGY 2 cut(s) 317, 806
Bse1I ACTGG 3 cut(s) 205, 539, 820
Bse3DI GCAATG 1 cut(s) 784
BseBI CCWGG 6 cut(s) 155, 815, 1056, 1194, 1679, 1703
BseCI ATCGAT 1 cut(s) 1449
BseDI CCNNGG 5 cut(s) 741, 1055, 1127, 1702, 1730
BseLI CCNNNNNNNGG 7 cut(s) 301, 1056, 1133, 1199, 1303, 1342, 1441
BseMI GCAATG 1 cut(s) 784
BseNI ACTGG 3 cut(s) 205, 539, 820
BseSI GKGCMC 1 cut(s) 1166
BseXI GCAGC 9 cut(s) 90, 122, 151, 442, 445, 448, 711, 1722, 1750
BseYI CCCAGC 2 cut(s) 228, 333
Bsh1236I CGCG 3 cut(s) 43, 90, 1119
BshFI GGCC 4 cut(s) 153, 813, 956, 1707
BshNI GGYRCC 3 cut(s) 1066, 1163, 1331
BshTI ACCGGT 1 cut(s) 317
BshVI ATCGAT 1 cut(s) 1449
BsiHKCI CYCGRG 3 cut(s) 263, 1180, 1561
BsiSI CCGG 4 cut(s) 318, 807, 950, 1076
BslFI GGGAC 1 cut(s) 891
BslI CCNNNNNNNGG 7 cut(s) 301, 1056, 1133, 1199, 1303, 1342, 1441
BsmAI GTCTC 5 cut(s) 26, 266, 995, 1183, 1575
BsmBI CGTCTC 1 cut(s) 1575
BsmFI GGGAC 1 cut(s) 891
BsnI GGCC 4 cut(s) 153, 813, 956, 1707
Bso31I GGTCTC 3 cut(s) 26, 266, 1183
BsoBI CYCGRG 3 cut(s) 263, 1180, 1561
Bsp119I TTCGAA 1 cut(s) 1486
Bsp1286I GDGCHC 1 cut(s) 1166
Bsp143I GATC 8 cut(s) 75, 80, 145, 240, 829, 1078, 1446, 1525
BspACI CCGC 6 cut(s) 292, 581, 607, 682, 810, 1119
BspANI GGCC 4 cut(s) 153, 813, 956, 1707
BspDI ATCGAT 1 cut(s) 1449
BspFNI CGCG 3 cut(s) 43, 90, 1119
BspHI TCATGA 1 cut(s) 1458
BspLI GGNNCC 5 cut(s) 1068, 1080, 1165, 1204, 1333
BspMAI CTGCAG 2 cut(s) 701, 1740
BspMI ACCTGC 4 cut(s) 371, 442, 537, 686
BspPI GGATC 5 cut(s) 70, 75, 1073, 1086, 1454
BspT104I TTCGAA 1 cut(s) 1486
BspT107I GGYRCC 3 cut(s) 1066, 1163, 1331
BspTNI GGTCTC 3 cut(s) 26, 266, 1183
BsrDI GCAATG 1 cut(s) 784
BsrFI RCCGGY 2 cut(s) 317, 806
BsrI ACTGG 3 cut(s) 205, 539, 820
BssAI RCCGGY 2 cut(s) 317, 806
BssECI CCNNGG 5 cut(s) 741, 1055, 1127, 1702, 1730
BssMI GATC 8 cut(s) 75, 80, 145, 240, 829, 1078, 1446, 1525
BssT1I CCWWGG 3 cut(s) 741, 1127, 1730
Bst2UI CCWGG 6 cut(s) 155, 815, 1056, 1194, 1679, 1703
Bst4CI ACNGT 2 cut(s) 172, 511
BstBI TTCGAA 1 cut(s) 1486
BstC8I GCNNGC 5 cut(s) 101, 704, 726, 808, 1384
BstDEI CTNAG 2 cut(s) 27, 234
BstEII GGTNACC 1 cut(s) 1121
BstENI CCTNNNNNAGG 1 cut(s) 1197
BstFNI CGCG 3 cut(s) 43, 90, 1119
BstH2I RGCGCY 3 cut(s) 334, 410, 1596
BstHHI GCGC 3 cut(s) 333, 409, 1595
BstKTI GATC 8 cut(s) 78, 83, 148, 243, 832, 1081, 1449, 1528
BstMAI GTCTC 5 cut(s) 26, 266, 995, 1183, 1575
BstMBI GATC 8 cut(s) 75, 80, 145, 240, 829, 1078, 1446, 1525
BstMWI GCNNNNNNNGC 5 cut(s) 96, 404, 461, 730, 1379
BstNI CCWGG 6 cut(s) 155, 815, 1056, 1194, 1679, 1703
BstPAI GACNNNNGTC 1 cut(s) 1259
BstPI GGTNACC 1 cut(s) 1121
BstSCI CCNGG 6 cut(s) 153, 813, 1054, 1192, 1677, 1701
BstSFI CTRYAG 2 cut(s) 697, 1736
BstSLI GKGCMC 1 cut(s) 1166
BstUI CGCG 3 cut(s) 43, 90, 1119
BstV1I GCAGC 9 cut(s) 90, 122, 151, 442, 445, 448, 711, 1722, 1750
BstV2I GAAGAC 1 cut(s) 1610
BstX2I RGATCY 2 cut(s) 75, 1078
BstXI CCANNNNNNTGG 2 cut(s) 1062, 1174
BstYI RGATCY 2 cut(s) 75, 1078
Bsu15I ATCGAT 1 cut(s) 1449
BsuRI GGCC 4 cut(s) 153, 813, 956, 1707
BsuTUI ATCGAT 1 cut(s) 1449
BtgZI GCGATG 1 cut(s) 1586
BtsIMutI CAGTG 3 cut(s) 148, 168, 1103
BveI ACCTGC 4 cut(s) 371, 442, 537, 686
Cac8I GCNNGC 5 cut(s) 101, 704, 726, 808, 1384
CaiI CAGNNNCTG 1 cut(s) 458
CciI TCATGA 1 cut(s) 1458
CfoI GCGC 3 cut(s) 333, 409, 1595
Cfr10I RCCGGY 2 cut(s) 317, 806
Cfr13I GGNCC 3 cut(s) 817, 955, 1705
ClaI ATCGAT 1 cut(s) 1449
CseI GACGC 2 cut(s) 79, 477
CsiI ACCWGGT 1 cut(s) 1192
Csp6I GTAC 6 cut(s) 361, 538, 1042, 1137, 1197, 1332
CspAI ACCGGT 1 cut(s) 317
CspCI CAANNNNNGTGG 2 cut(s) 157, 192
CviAII CATG 7 cut(s) 71, 149, 1159, 1301, 1337, 1348, 1459
CviQI GTAC 6 cut(s) 361, 538, 1042, 1137, 1197, 1332
DdeI CTNAG 2 cut(s) 27, 234
DpnI GATC 8 cut(s) 77, 82, 147, 242, 831, 1080, 1448, 1527
DpnII GATC 8 cut(s) 75, 80, 145, 240, 829, 1078, 1446, 1525
DraIII CACNNNGTG 1 cut(s) 916
DriI GACNNNNNGTC 1 cut(s) 1614
EaeI YGGCCR 1 cut(s) 151
Eam1105I GACNNNNNGTC 1 cut(s) 1614
Eco130I CCWWGG 3 cut(s) 741, 1127, 1730
Eco31I GGTCTC 3 cut(s) 26, 266, 1183
Eco47I GGWCC 1 cut(s) 817
Eco47III AGCGCT 1 cut(s) 408
Eco57I CTGAAG 1 cut(s) 124
Eco88I CYCGRG 3 cut(s) 263, 1180, 1561
Eco91I GGTNACC 1 cut(s) 1121
EcoNI CCTNNNNNAGG 1 cut(s) 1197
EcoO109I RGGNCCY 1 cut(s) 955
EcoO65I GGTNACC 1 cut(s) 1121
EcoRII CCWGG 6 cut(s) 153, 813, 1054, 1192, 1677, 1701
EcoT14I CCWWGG 3 cut(s) 741, 1127, 1730
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 3 cut(s) 741, 1127, 1730
Esp3I CGTCTC 1 cut(s) 1575
FaeI CATG 7 cut(s) 74, 152, 1162, 1304, 1340, 1351, 1462
FalI AAGNNNNNCTT 2 cut(s) 227, 259
FaqI GGGAC 1 cut(s) 891
FatI CATG 7 cut(s) 70, 148, 1158, 1300, 1336, 1347, 1458
FbaI TGATCA 1 cut(s) 145
FblI GTMKAC 2 cut(s) 56, 1317
FspBI CTAG 4 cut(s) 1128, 1464, 1529, 1731
GlaI GCGC 3 cut(s) 332, 408, 1594
GsaI CCCAGC 2 cut(s) 232, 337
HaeII RGCGCY 3 cut(s) 334, 410, 1596
HaeIII GGCC 4 cut(s) 153, 813, 956, 1707
HapII CCGG 4 cut(s) 318, 807, 950, 1076
HgaI GACGC 2 cut(s) 79, 477
HhaI GCGC 3 cut(s) 333, 409, 1595
Hin1II CATG 7 cut(s) 74, 152, 1162, 1304, 1340, 1351, 1462
Hin6I GCGC 3 cut(s) 331, 407, 1593
HinP1I GCGC 3 cut(s) 331, 407, 1593
HincII GTYRAC 3 cut(s) 57, 967, 1318
HindII GTYRAC 3 cut(s) 57, 967, 1318
HindIII AAGCTT 1 cut(s) 1169
HinfI GANTC 7 cut(s) 14, 23, 38, 311, 763, 1451, 1652
HpaI GTTAAC 1 cut(s) 967
HpaII CCGG 4 cut(s) 318, 807, 950, 1076
HphI GGTGA 6 cut(s) 395, 667, 816, 928, 1133, 1718
Hpy166II GTNNAC 7 cut(s) 57, 216, 967, 1042, 1139, 1254, 1318
Hpy188I TCNGA 6 cut(s) 22, 80, 225, 285, 762, 1298
Hpy8I GTNNAC 7 cut(s) 57, 216, 967, 1042, 1139, 1254, 1318
Hpy99I CGWCG 2 cut(s) 95, 1589
HpyAV CCTTC 4 cut(s) 476, 936, 1303, 1678
HpyCH4III ACNGT 2 cut(s) 172, 511
HpyCH4IV ACGT 3 cut(s) 600, 969, 1236
HpyF10VI GCNNNNNNNGC 5 cut(s) 96, 404, 461, 730, 1379
HpyF3I CTNAG 2 cut(s) 27, 234
HpySE526I ACGT 3 cut(s) 600, 969, 1236
Hsp92II CATG 7 cut(s) 74, 152, 1162, 1304, 1340, 1351, 1462
HspAI GCGC 3 cut(s) 331, 407, 1593
KpnI GGTACC 1 cut(s) 1335
KroI GCCGGC 1 cut(s) 806
KroNI GCCGGC 1 cut(s) 808
Ksp22I TGATCA 1 cut(s) 145
KspAI GTTAAC 1 cut(s) 967
Kzo9I GATC 8 cut(s) 75, 80, 145, 240, 829, 1078, 1446, 1525
LmnI GCTCC 2 cut(s) 225, 847
Lsp1109I GCAGC 9 cut(s) 90, 122, 151, 442, 445, 448, 711, 1722, 1750
LweI GCATC 6 cut(s) 13, 106, 258, 367, 764, 931
MabI ACCWGGT 1 cut(s) 1192
MaeI CTAG 4 cut(s) 1128, 1464, 1529, 1731
MaeII ACGT 3 cut(s) 600, 969, 1236
MaeIII GTNAC 5 cut(s) 596, 822, 1121, 1261, 1724
MalI GATC 8 cut(s) 77, 82, 147, 242, 831, 1080, 1448, 1527
MboI GATC 8 cut(s) 75, 80, 145, 240, 829, 1078, 1446, 1525
MboII GAAGA 3 cut(s) 9, 398, 1610
MfeI CAATTG 1 cut(s) 795
MflI RGATCY 2 cut(s) 75, 1078
MhlI GDGCHC 1 cut(s) 1166
MlsI TGGCCA 1 cut(s) 153
MluCI AATT 8 cut(s) 389, 572, 795, 889, 1363, 1611, 1632, 1637
MluI ACGCGT 1 cut(s) 88
MluNI TGGCCA 1 cut(s) 153
MlyI GAGTC 2 cut(s) 772, 1661
MmeI TCCRAC 2 cut(s) 87, 1321
Mox20I TGGCCA 1 cut(s) 153
Mph1103I ATGCAT 1 cut(s) 6
MreI CGCCGGCG 1 cut(s) 806
MroNI GCCGGC 1 cut(s) 806
MscI TGGCCA 1 cut(s) 153
MseI TTAA 9 cut(s) 189, 372, 497, 879, 966, 1239, 1398, 1419, 1756
Msp20I TGGCCA 1 cut(s) 153
MspA1I CMGCKG 1 cut(s) 455
MspI CCGG 4 cut(s) 318, 807, 950, 1076
MspR9I CCNGG 6 cut(s) 155, 815, 1056, 1194, 1679, 1703
MunI CAATTG 1 cut(s) 795
MvaI CCWGG 6 cut(s) 155, 815, 1056, 1194, 1679, 1703
MvnI CGCG 3 cut(s) 43, 90, 1119
MwoI GCNNNNNNNGC 5 cut(s) 96, 404, 461, 730, 1379
NaeI GCCGGC 1 cut(s) 808
NdeII GATC 8 cut(s) 75, 80, 145, 240, 829, 1078, 1446, 1525
NgoMIV GCCGGC 1 cut(s) 806
NlaIII CATG 7 cut(s) 74, 152, 1162, 1304, 1340, 1351, 1462
NlaIV GGNNCC 5 cut(s) 1068, 1080, 1165, 1204, 1333
NmeAIII GCCGAG 1 cut(s) 909
NmuCI GTSAC 4 cut(s) 822, 1121, 1261, 1724
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 1486
PaeR7I CTCGAG 2 cut(s) 1180, 1561
PagI TCATGA 1 cut(s) 1458
PaqCI CACCTGC 2 cut(s) 371, 686
PcsI WCGNNNNNNNCGW 1 cut(s) 1568
PdiI GCCGGC 1 cut(s) 808
PfeI GAWTC 5 cut(s) 14, 23, 38, 311, 1451
PflMI CCANNNNNTGG 1 cut(s) 1441
PinAI ACCGGT 1 cut(s) 317
PleI GAGTC 2 cut(s) 771, 1660
PpsI GAGTC 2 cut(s) 771, 1660
PshAI GACNNNNGTC 1 cut(s) 1259
PsiI TTATAA 1 cut(s) 897
Psp1406I AACGTT 1 cut(s) 969
Psp6I CCWGG 6 cut(s) 153, 813, 1054, 1192, 1677, 1701
PspEI GGTNACC 1 cut(s) 1121
PspFI CCCAGC 2 cut(s) 228, 333
PspGI CCWGG 6 cut(s) 153, 813, 1054, 1192, 1677, 1701
PspN4I GGNNCC 5 cut(s) 1068, 1080, 1165, 1204, 1333
PspPI GGNCC 3 cut(s) 817, 955, 1705
PspXI VCTCGAGB 1 cut(s) 1561
PstI CTGCAG 2 cut(s) 701, 1740
PstNI CAGNNNCTG 1 cut(s) 458
PsuI RGATCY 2 cut(s) 75, 1078
PvuII CAGCTG 1 cut(s) 455
RsaI GTAC 6 cut(s) 362, 539, 1043, 1138, 1198, 1333
RsaNI GTAC 6 cut(s) 361, 538, 1042, 1137, 1197, 1332
SalI GTCGAC 2 cut(s) 55, 1316
SaqAI TTAA 9 cut(s) 189, 372, 497, 879, 966, 1239, 1398, 1419, 1756
Sau3AI GATC 8 cut(s) 75, 80, 145, 240, 829, 1078, 1446, 1525
Sau96I GGNCC 3 cut(s) 817, 955, 1705
SchI GAGTC 2 cut(s) 772, 1661
ScrFI CCNGG 6 cut(s) 155, 815, 1056, 1194, 1679, 1703
SduI GDGCHC 1 cut(s) 1166
SexAI ACCWGGT 1 cut(s) 1192
SfaNI GCATC 6 cut(s) 13, 106, 258, 367, 764, 931
SfcI CTRYAG 2 cut(s) 697, 1736
Sfr274I CTCGAG 2 cut(s) 1180, 1561
SfuI TTCGAA 1 cut(s) 1486
SgrAI CRCCGGYG 1 cut(s) 806
SinI GGWCC 1 cut(s) 817
SlaI CTCGAG 2 cut(s) 1180, 1561
SmlI CTYRAG 5 cut(s) 412, 614, 837, 1180, 1561
SmoI CTYRAG 5 cut(s) 412, 614, 837, 1180, 1561
Sse9I AATT 8 cut(s) 389, 572, 795, 889, 1363, 1611, 1632, 1637
SsiI CCGC 6 cut(s) 292, 581, 607, 682, 810, 1119
SspMI CTAG 4 cut(s) 1128, 1464, 1529, 1731
StyD4I CCNGG 6 cut(s) 153, 813, 1054, 1192, 1677, 1701
StyI CCWWGG 3 cut(s) 741, 1127, 1730
TaaI ACNGT 2 cut(s) 172, 511
TaiI ACGT 3 cut(s) 603, 972, 1239
TaqI TCGA 8 cut(s) 56, 93, 623, 1181, 1317, 1449, 1486, 1562
TaqII GACCGA 1 cut(s) 50
TasI AATT 8 cut(s) 389, 572, 795, 889, 1363, 1611, 1632, 1637
TauI GCSGC 2 cut(s) 684, 813
TfiI GAWTC 5 cut(s) 14, 23, 38, 311, 1451
Tru1I TTAA 9 cut(s) 189, 372, 497, 879, 966, 1239, 1398, 1419, 1756
Tru9I TTAA 9 cut(s) 189, 372, 497, 879, 966, 1239, 1398, 1419, 1756
TscAI CASTG 3 cut(s) 148, 175, 1110
TseFI GTSAC 4 cut(s) 822, 1121, 1261, 1724
TseI GCWGC 9 cut(s) 103, 135, 164, 455, 458, 461, 699, 1735, 1738
Tsp45I GTSAC 4 cut(s) 822, 1121, 1261, 1724
TspDTI ATGAA 4 cut(s) 459, 990, 1013, 1708
TspRI CASTG 3 cut(s) 148, 175, 1110
Van91I CCANNNNNTGG 1 cut(s) 1441
VpaK11BI GGWCC 1 cut(s) 817
XagI CCTNNNNNAGG 1 cut(s) 1197
XapI RAATTY 1 cut(s) 889
XhoI CTCGAG 2 cut(s) 1180, 1561
XmaJI CCTAGG 2 cut(s) 1127, 1730
XmiI GTMKAC 2 cut(s) 56, 1317
XspI CTAG 4 cut(s) 1128, 1464, 1529, 1731
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.