Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000753

Physical Location & Seq

Genomic Coordinates Reverse (-)

66819261 .. 66822626

Gene Structure 3366 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG448600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGTATCGCCTTGATTCTTCTGATTCTAAGGAGACCGATTCGCGTATCGTCAAGTCGACTTCCAACACCCATGAGATCCGATCCCTACGCGTCGAGGGCTTGCTGCCAGAGATGGATGCGAAATATCTCTATGGCTGCTTCAGTGATCATGGCCAGGTTGTAGCTGCCACTGTTATTCATGGTAATGTGAGAACTGGTTTTGTTGAGTTTACTTCTCGGAGCTGGGCTGAGATGATCTTGAAGTCCTACAATGGTCTCGGGATGCCAAACTACCCTCAGATATACCGCCTGAAATGGGATATGGATGCTACCGGTATGATGTGGCGCTGGGATTATGCTTACGAGCGTTGTTCGTACTTTGGTTTTAATGATGCAGGTGAAGAATTGATCGCCAACAAAGCGCTCTTGAGATACAAGCACTTGATACCTGCTGTAAATGAAAAACCAGCTGCTGGTGGTGGTCAGCAACATCAGGAAGGCGTGTCTGGTTTAACATATGAGATAGTTGAAGAGATTCGCTACAACAACTGGTACGACGACAGGTTTCTGTATCTATGTATGGAGGAATTGTGTAAGGAAAAACACGGTTGTTACGTTATCCGCACCCTCAAGTTGTCGAACTTATTGTCATGCTCTTGCAAGTTTGACGAAAAGATTGGGAGTATAATCACCTGCCGCTATTGCGCCGACTGCAACGTGCCATTTGAATTGCAAAAGCAGGCTTGGCTATGCAAGGACTTGGGCAACCGGAAAAGTCCGAGGCTTATGGGATGCACTTCTTGTTTCGGCGTAATTATGTTCGCCGGCGGCCTGGACCAGTCACCAGATCAAACTCGAGCTCCATACTTTGTGCCGAGTCAAAAATGTTATTCTTTTCAGCCGAGAGATATTTACCACTATAATCCCGAGTGGATAAGGCTTCCTTACTCTCTCAAAAGCGGGAAACAGGGGGCCCTGCTGGTTAACGTTGGTGGAAGTCTCTGTTGTCTCTCTGGTTTACTCGTTGGTCAGCAAGTCGCTCATCCTACTTTTGAGGTGTTCGATCCCTTTGACGAGAGATGGGTGCCTCTGCCGGATCCTCCTTTTTACAGACCCGAAGCACTGAATTACAAACACGGTGACCCTAGGCCTGGTACACACTTGTCTTATGCAATCATGGGCACCAAGCTTTTGGTCTCGAGCAAGATCCCTGGTTCAGATTCCCCTCACTTTCCCGTTTGTTGCTTTGACGTTGAGGAAAAAAAGTGGACAGAGGTCACTACCTTGTTCAATGGTAAGCCTTTTCCCTTCCGACGCAGGGCTTTAGTGGTCGACTTGGAGGATGGTACCCATGATAAGGTCATGTTTTACTTCAATAATTATTTTGCTATAAGAGTCTGCCGATTAGTAGTTAATGAGGATGATGGTAGTATTAAGAACTCACCGCACCAATCTCTGGGGATTGATACCCTCATGACTAGCTTATTGGAAATTACCATTCAAAATCAGTCAATGGTGAAAATGTCGTGGGATTTTGTTGATCTAGGAAATAAAAAAGTCTGCTTTGTTTTGTCCTCGAGCCTCCCGAAAGGCAGAGAGGACGAGGGTTTCTGTCATCGCCAGACCTTGCGTCTTCTTATCTTGGTAATTCAATTTCAAGTTTTGGAATCAGGAGATTTCTCCTTCAAGTTCCTGGCTACTCGCACCTTTGAATACCAGGGCCATTTCCCTCGCATCTGGCACCCCAATCTGCAGGGTTGCTTTCTGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00020 ko00190 ko01100 ko01110 ko01120 ko01130 ko01200 ko03015 ko03040 ko04714 ko04932 ko05010 ko05012 ko05016 map00020 map00190 map01100 map01110 map01120 map01130 map01200 map03015 map03040 map04714 map04932 map05010 map05012 map05016

Pfam Domains

Protein Families

RRM_1

Protein Analysis

583

Amino Acids

66.81

Weight (kDa)

6.76

Isoelectric Point (pI)

44.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	29 - 88	7.3e-06	RNA recognition motif
DUF1668	PF07893	308 - 437	2.2e-07	Protein of unknown function (DUF1668)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000753)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g26720 FvH4_7g27001 FvH4_7g27001 FvH4_7g27001 FvH4_7g31210 FvH4_7g31211 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31310 FvH4_7g31320 FvH4_7g31670 FvH4_7g31670 FvH4_7g31681 FvH4_7g31682
rosa_chinensis	RchiOBHm_Chr1g0337091 RchiOBHm_Chr1g0337131 RchiOBHm_Chr1g0380941
rosa_laevigata	RLG00000026258 RLG00000026260 RLG00000026268 RLG00000026269 RLG00000029305
rosa_multiflora	Rmu_co8190652.1_g000001 Rmu_co8273449.1_g000001 Rmu_co8310417.1_g000001 Rmu_sc0002160.1_g000028 Rmu_sc0002160.1_g000031 Rmu_sc0002962.1_g000022 Rmu_sc0004623.1_g000006 Rmu_sc0004623.1_g000007 Rmu_sc0013826.1_g000002 Rmu_sc0013826.1_g000003 Rmu_sc0020974.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105360 Rroxscaffold_4G00314970 Rroxscaffold_6G00413200
rosa_rugosa	Rorug01G0131100 Rorug01G0423200 Rorug01G0424100
rosa_samantha	Rh1AG151800 Rh1AG152100 Rh1AG447500 Rh1AG447600 Rh1AG448600 Rh1AG449500 Rh1AG449700 Rh1BG119600 Rh1BG404200 Rh1BG405400 Rh1CG143000 Rh1CG418300 Rh1DG159000 Rh1DG159300 Rh1DG159400 Rh1DG434600 Rh1DG435500 Rh1DG435900
rosa_wichuraiana	Rw0G005920 Rw0G005960 Rw0G005970 Rw1G012410 Rw1G012420 Rw1G038950 Rw1G039110 Rw1G039170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	365, 680
Acc36I	ACCTGC	3 cut(s)	365, 436, 680
Acc65I	GGTACC	1 cut(s)	1325
AccB1I	GGYRCC	4 cut(s)	1063, 1160, 1325, 1719
AccB7I	CCANNNNNTGG	2 cut(s)	452, 1435
AccI	GTMKAC	2 cut(s)	56, 1311
AccII	CGCG	2 cut(s)	43, 90
AciI	CCGC	6 cut(s)	286, 601, 676, 807, 939, 1424
AclI	AACGTT	1 cut(s)	966
AclWI	GGATC	6 cut(s)	70, 75, 1037, 1070, 1083, 1180
AcoI	YGGCCR	1 cut(s)	151
AcuI	CTGAAG	1 cut(s)	124
AfaI	GTAC	4 cut(s)	356, 533, 1135, 1327
AfeI	AGCGCT	1 cut(s)	402
AfiI	CCNNNNNNNGG	6 cut(s)	295, 452, 1130, 1297, 1336, 1435
AflIII	ACRYGT	1 cut(s)	88
AgeI	ACCGGT	1 cut(s)	311
AhdI	GACNNNNNGTC	1 cut(s)	1608
AjnI	CCWGG	6 cut(s)	153, 810, 1129, 1189, 1671, 1695
AluBI	AGCT	6 cut(s)	164, 222, 449, 839, 1168, 1461
AluI	AGCT	6 cut(s)	164, 222, 449, 839, 1168, 1461
Alw21I	GWGCWC	1 cut(s)	841
Alw26I	GTCTC	5 cut(s)	26, 260, 983, 992, 1180
AlwI	GGATC	6 cut(s)	70, 75, 1037, 1070, 1083, 1180
AlwNI	CAGNNNCTG	1 cut(s)	452
Ama87I	CYCGRG	5 cut(s)	257, 834, 905, 1177, 1555
Aor51HI	AGCGCT	1 cut(s)	402
AoxI	GGCC	5 cut(s)	151, 808, 951, 1127, 1699
ApaI	GGGCCC	1 cut(s)	955
ApeKI	GCWGC	4 cut(s)	103, 135, 164, 449
ArsI	GACNNNNNNTTYG	2 cut(s)	611, 643
AsiGI	ACCGGT	1 cut(s)	311
Asp700I	GAANNNNTTC	1 cut(s)	513
Asp718I	GGTACC	1 cut(s)	1325
AspA2I	CCTAGG	1 cut(s)	1124
AspLEI	GCGC	3 cut(s)	327, 403, 686
AspS9I	GGNCC	4 cut(s)	814, 951, 952, 1699
AsuHPI	GGTGA	6 cut(s)	389, 661, 813, 1130, 1413, 1507
AvaI	CYCGRG	5 cut(s)	257, 834, 905, 1177, 1555
AvaII	GGWCC	1 cut(s)	814
AvrII	CCTAGG	1 cut(s)	1124
BaeGI	GKGCMC	2 cut(s)	955, 1163
BalI	TGGCCA	1 cut(s)	153
BamHI	GGATCC	1 cut(s)	1075
BanI	GGYRCC	4 cut(s)	1063, 1160, 1325, 1719
BanII	GRGCYC	2 cut(s)	841, 955
BbsI	GAAGAC	1 cut(s)	1604
Bbv12I	GWGCWC	1 cut(s)	841
BbvI	GCAGC	4 cut(s)	90, 122, 151, 436
BccI	CCATC	4 cut(s)	106, 1053, 1316, 1397
BciT130I	CCWGG	6 cut(s)	155, 812, 1131, 1191, 1673, 1697
BclI	TGATCA	1 cut(s)	145
BcoDI	GTCTC	5 cut(s)	26, 260, 983, 992, 1180
BfaI	CTAG	3 cut(s)	1125, 1458, 1523
BfmI	CTRYAG	1 cut(s)	1730
BfoI	RGCGCY	2 cut(s)	328, 404
BfuAI	ACCTGC	3 cut(s)	365, 436, 680
BisI	GCNGC	6 cut(s)	104, 136, 165, 450, 676, 808
BlnI	CCTAGG	1 cut(s)	1124
BlsI	GCNGC	6 cut(s)	105, 137, 166, 451, 677, 809
Bme1390I	CCNGG	6 cut(s)	155, 812, 1131, 1191, 1673, 1697
Bme18I	GGWCC	1 cut(s)	814
BmeRI	GACNNNNNGTC	1 cut(s)	1608
BmeT110I	CYCGRG	5 cut(s)	257, 834, 905, 1177, 1555
BmgT120I	GGNCC	4 cut(s)	814, 951, 952, 1699
BmiI	GGNNCC	7 cut(s)	952, 953, 1065, 1077, 1162, 1327, 1721
BmrFI	CCNGG	6 cut(s)	155, 812, 1131, 1191, 1673, 1697
BmsI	GCATC	6 cut(s)	106, 252, 295, 361, 761, 1722
BoxI	GACNNNNGTC	1 cut(s)	1253
BpiI	GAAGAC	1 cut(s)	1604
BpuEI	CTTGAG	2 cut(s)	427, 593
BsaI	GGTCTC	3 cut(s)	26, 260, 1180
BsaJI	CCNNGG	4 cut(s)	758, 1124, 1189, 1696
BsaWI	WCCGGW	2 cut(s)	311, 747
BsaXI	ACNNNNNCTCC	4 cut(s)	554, 584, 823, 853
Bsc4I	CCNNNNNNNGG	6 cut(s)	295, 452, 1130, 1297, 1336, 1435
Bse118I	RCCGGY	2 cut(s)	311, 803
Bse1I	ACTGG	3 cut(s)	199, 533, 817
BseBI	CCWGG	6 cut(s)	155, 812, 1131, 1191, 1673, 1697
BseDI	CCNNGG	4 cut(s)	758, 1124, 1189, 1696
BseGI	GGATG	7 cut(s)	121, 267, 310, 776, 1021, 1327, 1405
BseLI	CCNNNNNNNGG	6 cut(s)	295, 452, 1130, 1297, 1336, 1435
BseMII	CTCAG	2 cut(s)	219, 290
BseNI	ACTGG	3 cut(s)	199, 533, 817
BseSI	GKGCMC	2 cut(s)	955, 1163
BseXI	GCAGC	4 cut(s)	90, 122, 151, 436
BseYI	CCCAGC	2 cut(s)	222, 327
Bsh1236I	CGCG	2 cut(s)	43, 90
BshFI	GGCC	5 cut(s)	153, 810, 953, 1129, 1701
BshNI	GGYRCC	4 cut(s)	1063, 1160, 1325, 1719
BshTI	ACCGGT	1 cut(s)	311
BsiHKAI	GWGCWC	1 cut(s)	841
BsiHKCI	CYCGRG	5 cut(s)	257, 834, 905, 1177, 1555
BsiSI	CCGG	4 cut(s)	312, 748, 804, 1073
BslI	CCNNNNNNNGG	6 cut(s)	295, 452, 1130, 1297, 1336, 1435
BsmAI	GTCTC	5 cut(s)	26, 260, 983, 992, 1180
BsnI	GGCC	5 cut(s)	153, 810, 953, 1129, 1701
Bso31I	GGTCTC	3 cut(s)	26, 260, 1180
BsoBI	CYCGRG	5 cut(s)	257, 834, 905, 1177, 1555
Bsp120I	GGGCCC	1 cut(s)	951
Bsp1286I	GDGCHC	3 cut(s)	841, 955, 1163
BspACI	CCGC	6 cut(s)	286, 601, 676, 807, 939, 1424
BspANI	GGCC	5 cut(s)	153, 810, 953, 1129, 1701
BspCNI	CTCAG	2 cut(s)	220, 289
BspFNI	CGCG	2 cut(s)	43, 90
BspHI	TCATGA	1 cut(s)	1452
BspLI	GGNNCC	7 cut(s)	952, 953, 1065, 1077, 1162, 1327, 1721
BspMAI	CTGCAG	1 cut(s)	1734
BspMI	ACCTGC	3 cut(s)	365, 436, 680
BspPI	GGATC	6 cut(s)	70, 75, 1037, 1070, 1083, 1180
BspT107I	GGYRCC	4 cut(s)	1063, 1160, 1325, 1719
BspTNI	GGTCTC	3 cut(s)	26, 260, 1180
BsrFI	RCCGGY	2 cut(s)	311, 803
BsrI	ACTGG	3 cut(s)	199, 533, 817
BssAI	RCCGGY	2 cut(s)	311, 803
BssECI	CCNNGG	4 cut(s)	758, 1124, 1189, 1696
BssT1I	CCWWGG	1 cut(s)	1124
Bst2UI	CCWGG	6 cut(s)	155, 812, 1131, 1191, 1673, 1697
Bst4CI	ACNGT	3 cut(s)	172, 587, 1118
Bst6I	CTCTTC	1 cut(s)	504
BstC8I	GCNNGC	3 cut(s)	101, 720, 805
BstDEI	CTNAG	3 cut(s)	27, 228, 276
BstEII	GGTNACC	1 cut(s)	1118
BstF5I	GGATG	7 cut(s)	121, 267, 310, 776, 1021, 1327, 1405
BstFNI	CGCG	2 cut(s)	43, 90
BstH2I	RGCGCY	2 cut(s)	328, 404
BstHHI	GCGC	3 cut(s)	327, 403, 686
BstMAI	GTCTC	5 cut(s)	26, 260, 983, 992, 1180
BstMWI	GCNNNNNNNGC	5 cut(s)	96, 398, 681, 690, 724
BstNI	CCWGG	6 cut(s)	155, 812, 1131, 1191, 1673, 1697
BstPAI	GACNNNNGTC	1 cut(s)	1253
BstPI	GGTNACC	1 cut(s)	1118
BstSCI	CCNGG	6 cut(s)	153, 810, 1129, 1189, 1671, 1695
BstSFI	CTRYAG	1 cut(s)	1730
BstSLI	GKGCMC	2 cut(s)	955, 1163
BstUI	CGCG	2 cut(s)	43, 90
BstV1I	GCAGC	4 cut(s)	90, 122, 151, 436
BstV2I	GAAGAC	1 cut(s)	1604
BstX2I	RGATCY	3 cut(s)	75, 1075, 1185
BstXI	CCANNNNNNTGG	1 cut(s)	1171
BstYI	RGATCY	3 cut(s)	75, 1075, 1185
BsuRI	GGCC	5 cut(s)	153, 810, 953, 1129, 1701
BtgZI	GCGATG	1 cut(s)	1580
BtsCI	GGATG	7 cut(s)	121, 267, 310, 776, 1021, 1327, 1405
BtsIMutI	CAGTG	3 cut(s)	148, 168, 1100
BveI	ACCTGC	3 cut(s)	365, 436, 680
Cac8I	GCNNGC	3 cut(s)	101, 720, 805
CaiI	CAGNNNCTG	1 cut(s)	452
CciI	TCATGA	1 cut(s)	1452
CfoI	GCGC	3 cut(s)	327, 403, 686
Cfr10I	RCCGGY	2 cut(s)	311, 803
Cfr13I	GGNCC	4 cut(s)	814, 951, 952, 1699
CseI	GACGC	3 cut(s)	79, 1302, 1598
Csp6I	GTAC	4 cut(s)	355, 532, 1134, 1326
CspAI	ACCGGT	1 cut(s)	311
CviAII	CATG	8 cut(s)	71, 149, 179, 630, 1156, 1331, 1342, 1453
CviQI	GTAC	4 cut(s)	355, 532, 1134, 1326
DdeI	CTNAG	3 cut(s)	27, 228, 276
DriI	GACNNNNNGTC	1 cut(s)	1608
EaeI	YGGCCR	1 cut(s)	151
Eam1104I	CTCTTC	1 cut(s)	504
Eam1105I	GACNNNNNGTC	1 cut(s)	1608
EarI	CTCTTC	1 cut(s)	504
Ecl136II	GAGCTC	1 cut(s)	839
Eco130I	CCWWGG	1 cut(s)	1124
Eco147I	AGGCCT	1 cut(s)	1129
Eco24I	GRGCYC	2 cut(s)	841, 955
Eco31I	GGTCTC	3 cut(s)	26, 260, 1180
Eco47I	GGWCC	1 cut(s)	814
Eco47III	AGCGCT	1 cut(s)	402
Eco53kI	GAGCTC	1 cut(s)	839
Eco57I	CTGAAG	1 cut(s)	124
Eco88I	CYCGRG	5 cut(s)	257, 834, 905, 1177, 1555
Eco91I	GGTNACC	1 cut(s)	1118
EcoICRI	GAGCTC	1 cut(s)	839
EcoO109I	RGGNCCY	2 cut(s)	951, 952
EcoO65I	GGTNACC	1 cut(s)	1118
EcoRII	CCWGG	6 cut(s)	153, 810, 1129, 1189, 1671, 1695
EcoT14I	CCWWGG	1 cut(s)	1124
EcoT38I	GRGCYC	2 cut(s)	841, 955
ErhI	CCWWGG	1 cut(s)	1124
FaeI	CATG	8 cut(s)	74, 152, 182, 633, 1159, 1334, 1345, 1456
FalI	AAGNNNNNCTT	2 cut(s)	907, 939
FatI	CATG	8 cut(s)	70, 148, 178, 629, 1155, 1330, 1341, 1452
FauI	CCCGC	1 cut(s)	932
FauNDI	CATATG	1 cut(s)	496
FbaI	TGATCA	1 cut(s)	145
FblI	GTMKAC	2 cut(s)	56, 1311
Fnu4HI	GCNGC	6 cut(s)	104, 136, 165, 450, 676, 808
FokI	GGATG	7 cut(s)	128, 274, 317, 783, 1008, 1334, 1412
FriOI	GRGCYC	2 cut(s)	841, 955
Fsp4HI	GCNGC	6 cut(s)	104, 136, 165, 450, 676, 808
FspBI	CTAG	3 cut(s)	1125, 1458, 1523
GlaI	GCGC	3 cut(s)	326, 402, 685
GluI	GCNGC	6 cut(s)	104, 136, 165, 450, 676, 808
GsaI	CCCAGC	2 cut(s)	226, 331
HaeII	RGCGCY	2 cut(s)	328, 404
HaeIII	GGCC	5 cut(s)	153, 810, 953, 1129, 1701
HapII	CCGG	4 cut(s)	312, 748, 804, 1073
HgaI	GACGC	3 cut(s)	79, 1302, 1598
HhaI	GCGC	3 cut(s)	327, 403, 686
Hin1II	CATG	8 cut(s)	74, 152, 182, 633, 1159, 1334, 1345, 1456
Hin6I	GCGC	3 cut(s)	325, 401, 684
HinP1I	GCGC	3 cut(s)	325, 401, 684
HincII	GTYRAC	3 cut(s)	57, 964, 1312
HindII	GTYRAC	3 cut(s)	57, 964, 1312
HindIII	AAGCTT	1 cut(s)	1166
HinfI	GANTC	8 cut(s)	14, 23, 38, 514, 856, 1199, 1374, 1646
HpaI	GTTAAC	1 cut(s)	964
HpaII	CCGG	4 cut(s)	312, 748, 804, 1073
HphI	GGTGA	6 cut(s)	389, 661, 813, 1130, 1413, 1507
Hpy166II	GTNNAC	7 cut(s)	57, 210, 964, 998, 1136, 1248, 1312
Hpy188I	TCNGA	7 cut(s)	22, 80, 219, 279, 759, 1198, 1292
Hpy188III	TCNNGA	9 cut(s)	238, 259, 406, 473, 905, 1177, 1453, 1564, 1650
Hpy8I	GTNNAC	7 cut(s)	57, 210, 964, 998, 1136, 1248, 1312
Hpy99I	CGWCG	3 cut(s)	95, 539, 1296
HpyAV	CCTTC	3 cut(s)	470, 1297, 1672
HpyCH4III	ACNGT	3 cut(s)	172, 587, 1118
HpyCH4IV	ACGT	4 cut(s)	594, 696, 966, 1230
HpyCH4V	TGCA	8 cut(s)	374, 639, 693, 712, 732, 774, 1151, 1732
HpyF10VI	GCNNNNNNNGC	5 cut(s)	96, 398, 681, 690, 724
HpyF3I	CTNAG	3 cut(s)	27, 228, 276
HpySE526I	ACGT	4 cut(s)	594, 696, 966, 1230
Hsp92II	CATG	8 cut(s)	74, 152, 182, 633, 1159, 1334, 1345, 1456
HspAI	GCGC	3 cut(s)	325, 401, 684
KpnI	GGTACC	1 cut(s)	1329
KroI	GCCGGC	1 cut(s)	803
KroNI	GCCGGC	1 cut(s)	805
Ksp22I	TGATCA	1 cut(s)	145
KspAI	GTTAAC	1 cut(s)	964
LmnI	GCTCC	2 cut(s)	219, 844
Lsp1109I	GCAGC	4 cut(s)	90, 122, 151, 436
LweI	GCATC	6 cut(s)	106, 252, 295, 361, 761, 1722
MaeI	CTAG	3 cut(s)	1125, 1458, 1523
MaeII	ACGT	4 cut(s)	594, 696, 966, 1230
MaeIII	GTNAC	4 cut(s)	590, 819, 1118, 1255
MboII	GAAGA	4 cut(s)	9, 392, 521, 1604
MflI	RGATCY	3 cut(s)	75, 1075, 1185
MhlI	GDGCHC	3 cut(s)	841, 955, 1163
MlsI	TGGCCA	1 cut(s)	153
MluCI	AATT	9 cut(s)	383, 566, 707, 792, 1105, 1357, 1470, 1626, 1631
MluI	ACGCGT	1 cut(s)	88
MluNI	TGGCCA	1 cut(s)	153
MlyI	GAGTC	2 cut(s)	865, 1383
MmeI	TCCRAC	2 cut(s)	87, 1315
Mox20I	TGGCCA	1 cut(s)	153
MreI	CGCCGGCG	1 cut(s)	803
MroNI	GCCGGC	1 cut(s)	803
MroXI	GAANNNNTTC	1 cut(s)	513
MscI	TGGCCA	1 cut(s)	153
MseI	TTAA	6 cut(s)	366, 491, 963, 1392, 1413, 1750
MslI	CAYNNNNRTG	1 cut(s)	183
Msp20I	TGGCCA	1 cut(s)	153
MspA1I	CMGCKG	1 cut(s)	449
MspI	CCGG	4 cut(s)	312, 748, 804, 1073
MspR9I	CCNGG	6 cut(s)	155, 812, 1131, 1191, 1673, 1697
MvaI	CCWGG	6 cut(s)	155, 812, 1131, 1191, 1673, 1697
MvnI	CGCG	2 cut(s)	43, 90
MwoI	GCNNNNNNNGC	5 cut(s)	96, 398, 681, 690, 724
NaeI	GCCGGC	1 cut(s)	805
NdeI	CATATG	1 cut(s)	496
NgoMIV	GCCGGC	1 cut(s)	803
NlaIII	CATG	8 cut(s)	74, 152, 182, 633, 1159, 1334, 1345, 1456
NlaIV	GGNNCC	7 cut(s)	952, 953, 1065, 1077, 1162, 1327, 1721
NmeAIII	GCCGAG	2 cut(s)	879, 906
NmuCI	GTSAC	3 cut(s)	819, 1118, 1255
PaeR7I	CTCGAG	3 cut(s)	834, 1177, 1555
PagI	TCATGA	1 cut(s)	1452
PaqCI	CACCTGC	2 cut(s)	365, 680
PceI	AGGCCT	1 cut(s)	1129
PcsI	WCGNNNNNNNCGW	2 cut(s)	591, 1562
PdiI	GCCGGC	1 cut(s)	805
PdmI	GAANNNNTTC	1 cut(s)	513
PfeI	GAWTC	6 cut(s)	14, 23, 38, 514, 1199, 1646
PflMI	CCANNNNNTGG	2 cut(s)	452, 1435
PinAI	ACCGGT	1 cut(s)	311
PkrI	GCNGC	6 cut(s)	105, 137, 166, 451, 677, 809
PleI	GAGTC	2 cut(s)	864, 1382
PpsI	GAGTC	2 cut(s)	864, 1382
PshAI	GACNNNNGTC	1 cut(s)	1253
Psp124BI	GAGCTC	1 cut(s)	841
Psp1406I	AACGTT	1 cut(s)	966
Psp6I	CCWGG	6 cut(s)	153, 810, 1129, 1189, 1671, 1695
PspEI	GGTNACC	1 cut(s)	1118
PspFI	CCCAGC	2 cut(s)	222, 327
PspGI	CCWGG	6 cut(s)	153, 810, 1129, 1189, 1671, 1695
PspN4I	GGNNCC	7 cut(s)	952, 953, 1065, 1077, 1162, 1327, 1721
PspOMI	GGGCCC	1 cut(s)	951
PspPI	GGNCC	4 cut(s)	814, 951, 952, 1699
PspXI	VCTCGAGB	2 cut(s)	834, 1555
PstI	CTGCAG	1 cut(s)	1734
PstNI	CAGNNNCTG	1 cut(s)	452
PsuI	RGATCY	3 cut(s)	75, 1075, 1185
PvuII	CAGCTG	1 cut(s)	449
RsaI	GTAC	4 cut(s)	356, 533, 1135, 1327
RsaNI	GTAC	4 cut(s)	355, 532, 1134, 1326
RseI	CAYNNNNRTG	1 cut(s)	183
SacI	GAGCTC	1 cut(s)	841
SalI	GTCGAC	2 cut(s)	55, 1310
SaqAI	TTAA	6 cut(s)	366, 491, 963, 1392, 1413, 1750
SatI	GCNGC	6 cut(s)	104, 136, 165, 450, 676, 808
Sau96I	GGNCC	4 cut(s)	814, 951, 952, 1699
SchI	GAGTC	2 cut(s)	865, 1383
ScrFI	CCNGG	6 cut(s)	155, 812, 1131, 1191, 1673, 1697
SduI	GDGCHC	3 cut(s)	841, 955, 1163
SfaNI	GCATC	6 cut(s)	106, 252, 295, 361, 761, 1722
SfcI	CTRYAG	1 cut(s)	1730
Sfr274I	CTCGAG	3 cut(s)	834, 1177, 1555
SgrAI	CRCCGGYG	1 cut(s)	803
SinI	GGWCC	1 cut(s)	814
SlaI	CTCGAG	3 cut(s)	834, 1177, 1555
SmiMI	CAYNNNNRTG	1 cut(s)	183
SmlI	CTYRAG	5 cut(s)	406, 608, 834, 1177, 1555
SmoI	CTYRAG	5 cut(s)	406, 608, 834, 1177, 1555
Sse9I	AATT	9 cut(s)	383, 566, 707, 792, 1105, 1357, 1470, 1626, 1631
SseBI	AGGCCT	1 cut(s)	1129
SsiI	CCGC	6 cut(s)	286, 601, 676, 807, 939, 1424
SspMI	CTAG	3 cut(s)	1125, 1458, 1523
SstI	GAGCTC	1 cut(s)	841
StuI	AGGCCT	1 cut(s)	1129
StyD4I	CCNGG	6 cut(s)	153, 810, 1129, 1189, 1671, 1695
StyI	CCWWGG	1 cut(s)	1124
TaaI	ACNGT	3 cut(s)	172, 587, 1118
TaiI	ACGT	4 cut(s)	597, 699, 969, 1233
TaqI	TCGA	8 cut(s)	56, 93, 617, 835, 1041, 1178, 1311, 1556
TaqII	GACCGA	1 cut(s)	50
TasI	AATT	9 cut(s)	383, 566, 707, 792, 1105, 1357, 1470, 1626, 1631
TauI	GCSGC	2 cut(s)	678, 810
TfiI	GAWTC	6 cut(s)	14, 23, 38, 514, 1199, 1646
Tru1I	TTAA	6 cut(s)	366, 491, 963, 1392, 1413, 1750
Tru9I	TTAA	6 cut(s)	366, 491, 963, 1392, 1413, 1750
TscAI	CASTG	3 cut(s)	148, 175, 1107
TseFI	GTSAC	3 cut(s)	819, 1118, 1255
TseI	GCWGC	4 cut(s)	103, 135, 164, 449
Tsp45I	GTSAC	3 cut(s)	819, 1118, 1255
TspDTI	ATGAA	2 cut(s)	167, 453
TspRI	CASTG	3 cut(s)	148, 175, 1107
Van91I	CCANNNNNTGG	2 cut(s)	452, 1435
VpaK11BI	GGWCC	1 cut(s)	814
XhoI	CTCGAG	3 cut(s)	834, 1177, 1555
XmaJI	CCTAGG	1 cut(s)	1124
XmiI	GTMKAC	2 cut(s)	56, 1311
XmnI	GAANNNNTTC	1 cut(s)	513
XspI	CTAG	3 cut(s)	1125, 1458, 1523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.