Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0000753

Physical Location & Seq

Genomic Coordinates Forward (+)

66759553 .. 66762713

Gene Structure 3161 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G039170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGGAGCACACGACGGCAGCCAATTCCAACGCCGATGAGATCCGATCCCTACGCGTCGAGGGCTTGCTGCCAGAGATGGATGCGAAATACCTCTATGGCTGCTTCAGTGATCACGGCCAGGTTGTAGCTGCCACTGTTTTGCATAATGTGAGAACTGGTTTTGTTGAGTTTACTTCTCGGAGCTGGGCTGAGATGATCTTGAAGTCCTACAATGGTCACGGGATGCCAAACTTCAATCAGAGATACCGCCTGAAATGGGATATGGATTCTGCCAGTATGATGTGGCGCTGGGATTATGCTTACGAGCGTTGTTCGTACTTTGGTTTTAATGATGCAGGTGAAGAATTGAACGCCAACAAAGCGCTGTTGAGATACAAGCACTCGATACCTGCTGTAAATGAAAAGCCAGTTGCTGCTGCTGGTCAGCAACATCAGGAAGATGAGTCTGATTTAGTAAATCAGAATTGTGAAGCGATTCTCTACGAGGAGTGGTGCAAGGAGAGGTTTCTGTATCTATGTATGGAGGAATTGTGTAAGGAAAAAGACGGTTGTTACGTTATCCGCACCCTCAACATGTCGAACTTATTGTCATGCTCTTGCAAGTTTGACGAAAAGATTGGGAGTATAATCACCTGCCGCTATTGCGCCGACTGCGACGTGCCATTTGAATTGCAAAAGCAGGCTTGGCTATGCACCAAGGACTTCGGCAACCGGAAAAGTCCGACGCTTATGGGATGCACTTCTTGTTTCAGCGGAATTATGTTCGCCGGCGGCCTGGACCAGTCACCAGATCAAACTCGAGCTCCTTACTATGTGCCGAGTCAACAATGTTATTATTTTCAGCCGAGAAATATTTGCAACGATAATCCCGAGTGGATAAGGCGTCCGTACTATCTCAAAAGCGGGAAACCGGAGGCCCTGCTGGTTAACGTTGATGGAAGTCTCTGTTGTCTCTCTGGTTTACTCGTTGGTCAGCAAGTCGCTCATCCTACTTTTGAGGTGTTCGATCCCTTTGACGAGAGATGGGTGCCTCTGCCGGATCCTCCTTTTTACAGACCCGAAGCACTGAATTACAAACACGGTGACCCTAGGCCTGGTACACACTTGTCTTATGCAGTCATGGGCACCAAGCTTTTGGTCTCGAGCAAGATCCCTGGTTCAGATTCCCCTCAATTTCCCATTTGTTGCTTTGACGTTGAGGAAAAAAAGTGGACAGAGGTCACTACCTTGTTCAATGGTAAGCCTTTTCCCTTCCGACGCAGGGCTTTAGTGGTCGACTTGGAGGATGGTACCCATGATAACGTCATGTTTTACTTCAATAATTATTTTGCTATAAGAGTCTGCCGATTAGTAGTTAATGAGGATGATGGTAGTATTAAGAACTCACCGCACCAATCTCTGGGGATTGATACCCTCATGACTAGCTTATTGGAAATTACCATTCAAAATCAGTCAATGGTGAAAATGTCGTGGGATTTTGTTGATCTAGGAAATAAAAAGGTCTGCTTTGTTTTGTCCTCGAGCCTCCCGAAAGGCAGAGACGACGACGAGTGTTTCTGTCATCGCCAGACCTTGCGTCTTCTTATCTTGGTAATTCAATTTCAAGTTTTGGAATCAGGAGATTTCTCCTTCAAGTTCCTGGCTACTCGCACCTTTGAATACCAGGGCCATTTCCCTCGCATCCGGCACCCCAAGCTGCAGGGTGAAGACTTGAATGCCATGAAAGTGATCAAGACATACCCGAACTGCATAACTGTTGTAACTGAAAAGCCAGCTGCTGGTGGTCGGCAACTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00020 ko00190 ko01100 ko01110 ko01120 ko01130 ko01200 ko03015 ko03040 ko04714 ko04932 ko05010 ko05012 ko05016 map00020 map00190 map01100 map01110 map01120 map01130 map01200 map03015 map03040 map04714 map04932 map05010 map05012 map05016

Pfam Domains

Protein Families

RRM_1

Protein Analysis

598

Amino Acids

68.47

Weight (kDa)

5.85

Isoelectric Point (pI)

45.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1668	PF07893	339 - 425	9.8e-08	Protein of unknown function (DUF1668)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000753)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g26720 FvH4_7g27001 FvH4_7g27001 FvH4_7g27001 FvH4_7g31210 FvH4_7g31211 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31310 FvH4_7g31320 FvH4_7g31670 FvH4_7g31670 FvH4_7g31681 FvH4_7g31682
rosa_chinensis	RchiOBHm_Chr1g0337091 RchiOBHm_Chr1g0337131 RchiOBHm_Chr1g0380941
rosa_laevigata	RLG00000026258 RLG00000026260 RLG00000026268 RLG00000026269 RLG00000029305
rosa_multiflora	Rmu_co8190652.1_g000001 Rmu_co8273449.1_g000001 Rmu_co8310417.1_g000001 Rmu_sc0002160.1_g000028 Rmu_sc0002160.1_g000031 Rmu_sc0002962.1_g000022 Rmu_sc0004623.1_g000006 Rmu_sc0004623.1_g000007 Rmu_sc0013826.1_g000002 Rmu_sc0013826.1_g000003 Rmu_sc0020974.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105360 Rroxscaffold_4G00314970 Rroxscaffold_6G00413200
rosa_rugosa	Rorug01G0131100 Rorug01G0423200 Rorug01G0424100
rosa_samantha	Rh1AG151800 Rh1AG152100 Rh1AG447500 Rh1AG447600 Rh1AG448600 Rh1AG449500 Rh1AG449700 Rh1BG119600 Rh1BG404200 Rh1BG405400 Rh1CG143000 Rh1CG418300 Rh1DG159000 Rh1DG159300 Rh1DG159400 Rh1DG434600 Rh1DG435500 Rh1DG435900
rosa_wichuraiana	Rw0G005920 Rw0G005960 Rw0G005970 Rw1G012410 Rw1G012420 Rw1G038950 Rw1G039110 Rw1G039170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	326, 641
Acc36I	ACCTGC	3 cut(s)	326, 397, 641
Acc65I	GGTACC	1 cut(s)	1289
AccB1I	GGYRCC	4 cut(s)	1027, 1124, 1289, 1686
AccB7I	CCANNNNNTGG	2 cut(s)	1399, 1778
AccI	GTMKAC	1 cut(s)	1275
AccII	CGCG	1 cut(s)	54
AciI	CCGC	7 cut(s)	247, 562, 637, 753, 771, 903, 1388
AclI	AACGTT	1 cut(s)	930
AclWI	GGATC	6 cut(s)	34, 39, 1001, 1034, 1047, 1144
AcoI	YGGCCR	1 cut(s)	115
AcuI	CTGAAG	1 cut(s)	88
AcyI	GRCGYC	1 cut(s)	883
AfaI	GTAC	4 cut(s)	317, 890, 1099, 1291
AfeI	AGCGCT	1 cut(s)	363
AfiI	CCNNNNNNNGG	5 cut(s)	256, 1094, 1261, 1399, 1778
AflIII	ACRYGT	2 cut(s)	52, 573
AhdI	GACNNNNNGTC	1 cut(s)	1575
AjiI	CACGTC	1 cut(s)	658
AjnI	CCWGG	6 cut(s)	117, 774, 1093, 1153, 1638, 1662
AluBI	AGCT	7 cut(s)	128, 183, 803, 1132, 1425, 1696, 1775
AluI	AGCT	7 cut(s)	128, 183, 803, 1132, 1425, 1696, 1775
Alw21I	GWGCWC	2 cut(s)	9, 805
Alw26I	GTCTC	4 cut(s)	947, 956, 1144, 1533
AlwI	GGATC	6 cut(s)	34, 39, 1001, 1034, 1047, 1144
AlwNI	CAGNNNCTG	2 cut(s)	413, 1778
Ama87I	CYCGRG	4 cut(s)	798, 869, 1141, 1519
Aor51HI	AGCGCT	1 cut(s)	363
AoxI	GGCC	5 cut(s)	115, 772, 915, 1091, 1666
ApeKI	GCWGC	8 cut(s)	17, 67, 99, 128, 413, 416, 1696, 1775
ArsI	GACNNNNNNTTYG	4 cut(s)	572, 604, 647, 679
Asp700I	GAANNNNTTC	1 cut(s)	474
Asp718I	GGTACC	1 cut(s)	1289
AspA2I	CCTAGG	1 cut(s)	1088
AspLEI	GCGC	3 cut(s)	288, 364, 647
AspS9I	GGNCC	3 cut(s)	778, 916, 1666
AsuHPI	GGTGA	7 cut(s)	350, 622, 777, 1094, 1377, 1471, 1715
AvaI	CYCGRG	4 cut(s)	798, 869, 1141, 1519
AvaII	GGWCC	1 cut(s)	778
AvrII	CCTAGG	1 cut(s)	1088
BaeGI	GKGCMC	1 cut(s)	1127
BamHI	GGATCC	1 cut(s)	1039
BanI	GGYRCC	4 cut(s)	1027, 1124, 1289, 1686
BanII	GRGCYC	1 cut(s)	805
BbsI	GAAGAC	2 cut(s)	1571, 1713
Bbv12I	GWGCWC	2 cut(s)	9, 805
BbvI	GCAGC	8 cut(s)	29, 54, 86, 115, 400, 403, 1683, 1762
BccI	CCATC	5 cut(s)	70, 929, 1017, 1280, 1361
BceAI	ACGGC	2 cut(s)	30, 130
BciT130I	CCWGG	6 cut(s)	119, 776, 1095, 1155, 1640, 1664
BclI	TGATCA	2 cut(s)	109, 1728
BcoDI	GTCTC	4 cut(s)	947, 956, 1144, 1533
BfaI	CTAG	3 cut(s)	1089, 1422, 1487
BfmI	CTRYAG	1 cut(s)	1697
BfoI	RGCGCY	2 cut(s)	289, 365
BfuAI	ACCTGC	3 cut(s)	326, 397, 641
BlnI	CCTAGG	1 cut(s)	1088
Bme1390I	CCNGG	6 cut(s)	119, 776, 1095, 1155, 1640, 1664
Bme18I	GGWCC	1 cut(s)	778
BmeRI	GACNNNNNGTC	1 cut(s)	1575
BmeT110I	CYCGRG	4 cut(s)	798, 869, 1141, 1519
BmgBI	CACGTC	1 cut(s)	658
BmgT120I	GGNCC	3 cut(s)	778, 916, 1666
BmiI	GGNNCC	5 cut(s)	1029, 1041, 1126, 1291, 1688
BmrFI	CCNGG	6 cut(s)	119, 776, 1095, 1155, 1640, 1664
BmsI	GCATC	5 cut(s)	70, 213, 322, 725, 1689
BoxI	GACNNNNGTC	1 cut(s)	1217
BpiI	GAAGAC	2 cut(s)	1571, 1713
BsaHI	GRCGYC	1 cut(s)	883
BsaI	GGTCTC	1 cut(s)	1144
BsaJI	CCNNGG	4 cut(s)	696, 1088, 1153, 1663
BsaWI	WCCGGW	2 cut(s)	711, 910
BsaXI	ACNNNNNCTCC	4 cut(s)	515, 545, 787, 817
Bsc4I	CCNNNNNNNGG	5 cut(s)	256, 1094, 1261, 1399, 1778
Bse118I	RCCGGY	1 cut(s)	767
Bse1I	ACTGG	4 cut(s)	160, 273, 407, 781
BseBI	CCWGG	6 cut(s)	119, 776, 1095, 1155, 1640, 1664
BseDI	CCNNGG	4 cut(s)	696, 1088, 1153, 1663
BseGI	GGATG	7 cut(s)	85, 228, 740, 985, 1291, 1369, 1680
BseLI	CCNNNNNNNGG	5 cut(s)	256, 1094, 1261, 1399, 1778
BseMII	CTCAG	1 cut(s)	180
BseNI	ACTGG	4 cut(s)	160, 273, 407, 781
BseRI	GAGGAG	1 cut(s)	500
BseSI	GKGCMC	1 cut(s)	1127
BseXI	GCAGC	8 cut(s)	29, 54, 86, 115, 400, 403, 1683, 1762
BseYI	CCCAGC	2 cut(s)	183, 288
Bsh1236I	CGCG	1 cut(s)	54
BshFI	GGCC	5 cut(s)	117, 774, 917, 1093, 1668
BshNI	GGYRCC	4 cut(s)	1027, 1124, 1289, 1686
BsiHKAI	GWGCWC	2 cut(s)	9, 805
BsiHKCI	CYCGRG	4 cut(s)	798, 869, 1141, 1519
BsiSI	CCGG	5 cut(s)	712, 768, 911, 1037, 1684
BslI	CCNNNNNNNGG	5 cut(s)	256, 1094, 1261, 1399, 1778
BsmAI	GTCTC	4 cut(s)	947, 956, 1144, 1533
BsmBI	CGTCTC	1 cut(s)	1533
BsmI	GAATGC	1 cut(s)	1720
BsnI	GGCC	5 cut(s)	117, 774, 917, 1093, 1668
Bso31I	GGTCTC	1 cut(s)	1144
BsoBI	CYCGRG	4 cut(s)	798, 869, 1141, 1519
Bsp1286I	GDGCHC	3 cut(s)	9, 805, 1127
BspACI	CCGC	7 cut(s)	247, 562, 637, 753, 771, 903, 1388
BspANI	GGCC	5 cut(s)	117, 774, 917, 1093, 1668
BspCNI	CTCAG	1 cut(s)	181
BspFNI	CGCG	1 cut(s)	54
BspHI	TCATGA	1 cut(s)	1416
BspLI	GGNNCC	5 cut(s)	1029, 1041, 1126, 1291, 1688
BspMAI	CTGCAG	1 cut(s)	1701
BspMI	ACCTGC	3 cut(s)	326, 397, 641
BspPI	GGATC	6 cut(s)	34, 39, 1001, 1034, 1047, 1144
BspT107I	GGYRCC	4 cut(s)	1027, 1124, 1289, 1686
BspTNI	GGTCTC	1 cut(s)	1144
BsrFI	RCCGGY	1 cut(s)	767
BsrI	ACTGG	4 cut(s)	160, 273, 407, 781
BssAI	RCCGGY	1 cut(s)	767
BssECI	CCNNGG	4 cut(s)	696, 1088, 1153, 1663
BssNI	GRCGYC	1 cut(s)	883
BssT1I	CCWWGG	2 cut(s)	696, 1088
Bst2UI	CCWGG	6 cut(s)	119, 776, 1095, 1155, 1640, 1664
Bst4CI	ACNGT	4 cut(s)	136, 548, 1082, 1756
BstACI	GRCGYC	1 cut(s)	883
BstC8I	GCNNGC	4 cut(s)	65, 681, 769, 1773
BstDEI	CTNAG	1 cut(s)	189
BstEII	GGTNACC	1 cut(s)	1082
BstF5I	GGATG	7 cut(s)	85, 228, 740, 985, 1291, 1369, 1680
BstFNI	CGCG	1 cut(s)	54
BstH2I	RGCGCY	2 cut(s)	289, 365
BstHHI	GCGC	3 cut(s)	288, 364, 647
BstMAI	GTCTC	4 cut(s)	947, 956, 1144, 1533
BstMWI	GCNNNNNNNGC	6 cut(s)	60, 359, 642, 651, 685, 1693
BstNI	CCWGG	6 cut(s)	119, 776, 1095, 1155, 1640, 1664
BstNSI	RCATGY	1 cut(s)	577
BstPAI	GACNNNNGTC	1 cut(s)	1217
BstPI	GGTNACC	1 cut(s)	1082
BstSCI	CCNGG	6 cut(s)	117, 774, 1093, 1153, 1638, 1662
BstSFI	CTRYAG	1 cut(s)	1697
BstSLI	GKGCMC	1 cut(s)	1127
BstUI	CGCG	1 cut(s)	54
BstV1I	GCAGC	8 cut(s)	29, 54, 86, 115, 400, 403, 1683, 1762
BstV2I	GAAGAC	2 cut(s)	1571, 1713
BstX2I	RGATCY	3 cut(s)	39, 1039, 1149
BstXI	CCANNNNNNTGG	1 cut(s)	1135
BstYI	RGATCY	3 cut(s)	39, 1039, 1149
BsuRI	GGCC	5 cut(s)	117, 774, 917, 1093, 1668
BtgZI	GCGATG	1 cut(s)	1547
BtrI	CACGTC	1 cut(s)	658
BtsCI	GGATG	7 cut(s)	85, 228, 740, 985, 1291, 1369, 1680
BtsIMutI	CAGTG	3 cut(s)	112, 132, 1064
BveI	ACCTGC	3 cut(s)	326, 397, 641
Cac8I	GCNNGC	4 cut(s)	65, 681, 769, 1773
CaiI	CAGNNNCTG	2 cut(s)	413, 1778
CciI	TCATGA	1 cut(s)	1416
CfoI	GCGC	3 cut(s)	288, 364, 647
Cfr10I	RCCGGY	1 cut(s)	767
Cfr13I	GGNCC	3 cut(s)	778, 916, 1666
CseI	GACGC	5 cut(s)	43, 733, 872, 1266, 1565
Csp6I	GTAC	4 cut(s)	316, 889, 1098, 1290
CviAII	CATG	7 cut(s)	574, 591, 1120, 1295, 1306, 1417, 1720
CviQI	GTAC	4 cut(s)	316, 889, 1098, 1290
DdeI	CTNAG	1 cut(s)	189
DriI	GACNNNNNGTC	1 cut(s)	1575
EaeI	YGGCCR	1 cut(s)	115
Eam1105I	GACNNNNNGTC	1 cut(s)	1575
Ecl136II	GAGCTC	1 cut(s)	803
Eco130I	CCWWGG	2 cut(s)	696, 1088
Eco147I	AGGCCT	1 cut(s)	1093
Eco24I	GRGCYC	1 cut(s)	805
Eco31I	GGTCTC	1 cut(s)	1144
Eco47I	GGWCC	1 cut(s)	778
Eco47III	AGCGCT	1 cut(s)	363
Eco53kI	GAGCTC	1 cut(s)	803
Eco57I	CTGAAG	1 cut(s)	88
Eco88I	CYCGRG	4 cut(s)	798, 869, 1141, 1519
Eco91I	GGTNACC	1 cut(s)	1082
EcoICRI	GAGCTC	1 cut(s)	803
EcoO109I	RGGNCCY	1 cut(s)	916
EcoO65I	GGTNACC	1 cut(s)	1082
EcoRII	CCWGG	6 cut(s)	117, 774, 1093, 1153, 1638, 1662
EcoT14I	CCWWGG	2 cut(s)	696, 1088
EcoT38I	GRGCYC	1 cut(s)	805
ErhI	CCWWGG	2 cut(s)	696, 1088
Esp3I	CGTCTC	1 cut(s)	1533
FaeI	CATG	7 cut(s)	577, 594, 1123, 1298, 1309, 1420, 1723
FalI	AAGNNNNNCTT	2 cut(s)	1490, 1522
FatI	CATG	7 cut(s)	573, 590, 1119, 1294, 1305, 1416, 1719
FauI	CCCGC	1 cut(s)	896
FbaI	TGATCA	2 cut(s)	109, 1728
FblI	GTMKAC	1 cut(s)	1275
FokI	GGATG	7 cut(s)	92, 235, 747, 972, 1298, 1376, 1667
FriOI	GRGCYC	1 cut(s)	805
FspBI	CTAG	3 cut(s)	1089, 1422, 1487
GlaI	GCGC	3 cut(s)	287, 363, 646
GsaI	CCCAGC	2 cut(s)	187, 292
HaeII	RGCGCY	2 cut(s)	289, 365
HaeIII	GGCC	5 cut(s)	117, 774, 917, 1093, 1668
HapII	CCGG	5 cut(s)	712, 768, 911, 1037, 1684
HgaI	GACGC	5 cut(s)	43, 733, 872, 1266, 1565
HhaI	GCGC	3 cut(s)	288, 364, 647
Hin1I	GRCGYC	1 cut(s)	883
Hin1II	CATG	7 cut(s)	577, 594, 1123, 1298, 1309, 1420, 1723
Hin6I	GCGC	3 cut(s)	286, 362, 645
HinP1I	GCGC	3 cut(s)	286, 362, 645
HincII	GTYRAC	3 cut(s)	824, 928, 1276
HindII	GTYRAC	3 cut(s)	824, 928, 1276
HindIII	AAGCTT	1 cut(s)	1130
HinfI	GANTC	7 cut(s)	266, 443, 475, 820, 1163, 1338, 1613
HpaI	GTTAAC	1 cut(s)	928
HpaII	CCGG	5 cut(s)	712, 768, 911, 1037, 1684
HphI	GGTGA	7 cut(s)	350, 622, 777, 1094, 1377, 1471, 1715
Hpy166II	GTNNAC	7 cut(s)	171, 824, 928, 962, 1100, 1212, 1276
Hpy188I	TCNGA	8 cut(s)	44, 180, 240, 448, 462, 723, 1162, 1256
Hpy188III	TCNNGA	8 cut(s)	199, 434, 869, 1141, 1417, 1528, 1617, 1732
Hpy8I	GTNNAC	7 cut(s)	171, 824, 928, 962, 1100, 1212, 1276
Hpy99I	CGWCG	7 cut(s)	16, 59, 659, 727, 1260, 1547, 1550
HpyAV	CCTTC	2 cut(s)	1261, 1639
HpyCH4III	ACNGT	4 cut(s)	136, 548, 1082, 1756
HpyCH4IV	ACGT	5 cut(s)	555, 657, 930, 1194, 1302
HpyF10VI	GCNNNNNNNGC	6 cut(s)	60, 359, 642, 651, 685, 1693
HpyF3I	CTNAG	1 cut(s)	189
HpySE526I	ACGT	5 cut(s)	555, 657, 930, 1194, 1302
Hsp92I	GRCGYC	1 cut(s)	883
Hsp92II	CATG	7 cut(s)	577, 594, 1123, 1298, 1309, 1420, 1723
HspAI	GCGC	3 cut(s)	286, 362, 645
KpnI	GGTACC	1 cut(s)	1293
KroI	GCCGGC	1 cut(s)	767
KroNI	GCCGGC	1 cut(s)	769
Ksp22I	TGATCA	2 cut(s)	109, 1728
KspAI	GTTAAC	1 cut(s)	928
LmnI	GCTCC	3 cut(s)	4, 180, 808
Lsp1109I	GCAGC	8 cut(s)	29, 54, 86, 115, 400, 403, 1683, 1762
LweI	GCATC	5 cut(s)	70, 213, 322, 725, 1689
MaeI	CTAG	3 cut(s)	1089, 1422, 1487
MaeII	ACGT	5 cut(s)	555, 657, 930, 1194, 1302
MaeIII	GTNAC	6 cut(s)	215, 551, 783, 1082, 1219, 1759
MboII	GAAGA	4 cut(s)	353, 449, 1571, 1718
MflI	RGATCY	3 cut(s)	39, 1039, 1149
MhlI	GDGCHC	3 cut(s)	9, 805, 1127
MluI	ACGCGT	1 cut(s)	52
MlyI	GAGTC	3 cut(s)	452, 829, 1347
MmeI	TCCRAC	3 cut(s)	51, 746, 1279
MreI	CGCCGGCG	1 cut(s)	767
MroNI	GCCGGC	1 cut(s)	767
MroXI	GAANNNNTTC	1 cut(s)	474
MseI	TTAA	4 cut(s)	327, 927, 1356, 1377
MslI	CAYNNNNRTG	1 cut(s)	1724
MspA1I	CMGCKG	2 cut(s)	753, 1775
MspI	CCGG	5 cut(s)	712, 768, 911, 1037, 1684
MspR9I	CCNGG	6 cut(s)	119, 776, 1095, 1155, 1640, 1664
Mva1269I	GAATGC	1 cut(s)	1720
MvaI	CCWGG	6 cut(s)	119, 776, 1095, 1155, 1640, 1664
MvnI	CGCG	1 cut(s)	54
MwoI	GCNNNNNNNGC	6 cut(s)	60, 359, 642, 651, 685, 1693
NaeI	GCCGGC	1 cut(s)	769
NgoMIV	GCCGGC	1 cut(s)	767
NlaIII	CATG	7 cut(s)	577, 594, 1123, 1298, 1309, 1420, 1723
NlaIV	GGNNCC	5 cut(s)	1029, 1041, 1126, 1291, 1688
NmeAIII	GCCGAG	2 cut(s)	843, 870
NmuCI	GTSAC	4 cut(s)	215, 783, 1082, 1219
NspI	RCATGY	1 cut(s)	577
PaeR7I	CTCGAG	3 cut(s)	798, 1141, 1519
PagI	TCATGA	1 cut(s)	1416
PaqCI	CACCTGC	2 cut(s)	326, 641
PceI	AGGCCT	1 cut(s)	1093
PciI	ACATGT	1 cut(s)	573
PcsI	WCGNNNNNNNCGW	3 cut(s)	552, 867, 1526
PctI	GAATGC	1 cut(s)	1720
PdiI	GCCGGC	1 cut(s)	769
PdmI	GAANNNNTTC	1 cut(s)	474
PfeI	GAWTC	4 cut(s)	266, 475, 1163, 1613
PflMI	CCANNNNNTGG	2 cut(s)	1399, 1778
PleI	GAGTC	3 cut(s)	451, 828, 1346
PpsI	GAGTC	3 cut(s)	451, 828, 1346
PscI	ACATGT	1 cut(s)	573
PshAI	GACNNNNGTC	1 cut(s)	1217
Psp124BI	GAGCTC	1 cut(s)	805
Psp1406I	AACGTT	1 cut(s)	930
Psp6I	CCWGG	6 cut(s)	117, 774, 1093, 1153, 1638, 1662
PspEI	GGTNACC	1 cut(s)	1082
PspFI	CCCAGC	2 cut(s)	183, 288
PspGI	CCWGG	6 cut(s)	117, 774, 1093, 1153, 1638, 1662
PspN4I	GGNNCC	5 cut(s)	1029, 1041, 1126, 1291, 1688
PspPI	GGNCC	3 cut(s)	778, 916, 1666
PspXI	VCTCGAGB	2 cut(s)	798, 1519
PstI	CTGCAG	1 cut(s)	1701
PstNI	CAGNNNCTG	2 cut(s)	413, 1778
PsuI	RGATCY	3 cut(s)	39, 1039, 1149
PvuII	CAGCTG	1 cut(s)	1775
RsaI	GTAC	4 cut(s)	317, 890, 1099, 1291
RsaNI	GTAC	4 cut(s)	316, 889, 1098, 1290
RseI	CAYNNNNRTG	1 cut(s)	1724
SacI	GAGCTC	1 cut(s)	805
SalI	GTCGAC	1 cut(s)	1274
SaqAI	TTAA	4 cut(s)	327, 927, 1356, 1377
Sau96I	GGNCC	3 cut(s)	778, 916, 1666
SchI	GAGTC	3 cut(s)	452, 829, 1347
ScrFI	CCNGG	6 cut(s)	119, 776, 1095, 1155, 1640, 1664
SduI	GDGCHC	3 cut(s)	9, 805, 1127
SfaNI	GCATC	5 cut(s)	70, 213, 322, 725, 1689
SfcI	CTRYAG	1 cut(s)	1697
Sfr274I	CTCGAG	3 cut(s)	798, 1141, 1519
SgrAI	CRCCGGYG	1 cut(s)	767
SinI	GGWCC	1 cut(s)	778
SlaI	CTCGAG	3 cut(s)	798, 1141, 1519
SmiMI	CAYNNNNRTG	1 cut(s)	1724
SmlI	CTYRAG	3 cut(s)	798, 1141, 1519
SmoI	CTYRAG	3 cut(s)	798, 1141, 1519
SseBI	AGGCCT	1 cut(s)	1093
SsiI	CCGC	7 cut(s)	247, 562, 637, 753, 771, 903, 1388
SspI	AATATT	1 cut(s)	853
SspMI	CTAG	3 cut(s)	1089, 1422, 1487
SstI	GAGCTC	1 cut(s)	805
StuI	AGGCCT	1 cut(s)	1093
StyD4I	CCNGG	6 cut(s)	117, 774, 1093, 1153, 1638, 1662
StyI	CCWWGG	2 cut(s)	696, 1088
TaaI	ACNGT	4 cut(s)	136, 548, 1082, 1756
TaiI	ACGT	5 cut(s)	558, 660, 933, 1197, 1305
TaqI	TCGA	8 cut(s)	57, 383, 578, 799, 1005, 1142, 1275, 1520
TauI	GCSGC	2 cut(s)	639, 774
TfiI	GAWTC	4 cut(s)	266, 475, 1163, 1613
Tru1I	TTAA	4 cut(s)	327, 927, 1356, 1377
Tru9I	TTAA	4 cut(s)	327, 927, 1356, 1377
TscAI	CASTG	3 cut(s)	112, 139, 1071
TseFI	GTSAC	4 cut(s)	215, 783, 1082, 1219
TseI	GCWGC	8 cut(s)	17, 67, 99, 128, 413, 416, 1696, 1775
Tsp45I	GTSAC	4 cut(s)	215, 783, 1082, 1219
TspDTI	ATGAA	2 cut(s)	414, 1736
TspGWI	ACGGA	1 cut(s)	876
TspRI	CASTG	3 cut(s)	112, 139, 1071
Van91I	CCANNNNNTGG	2 cut(s)	1399, 1778
VpaK11BI	GGWCC	1 cut(s)	778
XceI	RCATGY	1 cut(s)	577
XhoI	CTCGAG	3 cut(s)	798, 1141, 1519
XmaJI	CCTAGG	1 cut(s)	1088
XmiI	GTMKAC	1 cut(s)	1275
XmnI	GAANNNNTTC	1 cut(s)	474
XspI	CTAG	3 cut(s)	1089, 1422, 1487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.