Rw1G012410

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000753
Physical Location & Seq
Reverse (-)
27626444 .. 27630093
3650 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G012410.1

Sequence Viewer

Length: 2007 bp
ATGCAGCAACCTCAGGAGTCGACGCCGGCAGCGGATGAGATTCGCTCCTTACGGGTCGACGGCTTGATTCCGAGGATGGGTGAGATGTATCTCTACAACTGCTTCAGTGACTGCGCAGAGGTTTTGGCTGCAACAGTTTTGCGGAAAGTGCAAACCGGATGGCAGGAAAATCATGGTTTTGTCGAGTTTGCTTCTCACAGTGTGGCTGAGTTTGTCTTGAGCTCCTACAATGGTGAGCTCATGCCCAACCACAATAATCGGAGATTTTACCTGAGCTGGGACACTGATGGTTACGGTACAAGGTGGCGCTGGGATCCTGTTTACCAGCAATGGTCTTTCTTTGGTTATGCTGAGCACGGTGGTATGTTGGATGCCAAGACAGTGATCGAGTTGTACAAGGACTGCATACCTGTTGTTACTGAAAAGCCATCTGGTAGTGCTCAGCAATATTCGCAAGCTGCCTACCCAAATACTCTTGGAGATTCAGGCGAGGCTATTCCAAATAACACAGAAAACCAGCTAGTACAGACAAAGTGGAATGGTTATGGTCGTGCTGGCTCTATGGATAGTTACAAGCGTTTGAAGCGTGCACATGTGGATCTATGGAATGGTGGTAATGGTGCTGGGTTTATGTTTATGCAGAACAACTTGATGCGTCCACATGACCTTAACCTGTATCATGGAGGACAGGCTGGATATGTAAATTACCAGCAGCATGTTCCTAACCTGCAGGCGGGATATGTAAATTACCAGCAGCATGGTCTCTACCCACAGGAGAAGAAGCTGTATTTATGTTTCGATGAGCACAATTCCCTGATCAATTGTTGTTATGTTCTCCGCACCATAAATTTGTCCGAGTTACTTGCATGCTCCTGTGAGTTTAGCAGCGATACTGAAGAAATAACCAAGTGCAGCTATTGCACCTCCAAAGTCAAACCGGAATCTCGGTTGCGCCAGCGGGCTTGGCTCTTCGCCAGCGAGGAAAATCCTTTCAGCTGCGGTAGGGTGGAGGTGATAATTCCTGCGCGTATGGGTTGCTGTGCCTCCGGCTCCCAAATCTTCTTCTCTGGTGGCATAGCTCCACTACCACTTAGGGAAAGACTATTTATGAAAAGACTATTTCTGCCAAGTGGAGATGTCTATAGTTTTGAACCCAAGTCTATGTTTTGGAAAAAGCATGATTGGAGTTTCCTGAAGGGGAAACCAGACCCCTTGCTTTTTGAGGTGAACGGAAATCTCTATTGTCTCACAGGTAGGCCCCTAGGTTTTTCTCTTGATCGTCCCACTTTCGAGGTATACTATAGCAGTTCTGGTGAATGTGAGGCTTTGCCGGATCCTCCATTTTACCTACCGGAACTAGATCAGAACGAAAACTACAGCGGCCGTTTGCCTGGTAGTGAATTGTCTTATGCTATTGTTGGTACCAAGATCTTGATCTCGAGCAGGCACAACAATGAATCAATCCCTAACTTTCCCATTATGTGTTTTGATGTGAATGAGAAGGAAAAGAAATGGAGAGAGATGACTTCCTTGTTCGATGGTAAGCCCTTTCCCTTCATCAGCAGGGCGGCTTTGGTCTTGGACTTGAACGATGGTACACATGATAAGGTCATGTTTTCCGTTCGTGAATATCACAGGATGTATGTCTCCCGATTAGTTGTGAATGATGATGGTAGTATATACAACTCTCAGGATTCTCCTCTGTTGTTTTTTAGCTGGTTCTATACCTTCTTTGGTGACCTTTGTCCTTTACATTCAAAGTCATACAGCTTTGTCGATCTAGGAAATCAAAAAGTTGGCTTTGTTGTGTGCGGGAACATGGGTACAATGGCAAGAGGTGATACACCTTCTCTCCGGATGGTGCGTGTTCTTGTGTTAGTAATTGAATATGAAGTGACAAAATCAAGATATGTACGGGGAAAGCTCCTGGCCACTCGCACCTTTGAATACAAATGCCATTCCGCCGGCCTCCGATCCGTCGACTTGATTGGTAGCTTTGTGTTCTAA

Protein Analysis

668

Amino Acids

76.17

Weight (kDa)

6.27

Isoelectric Point (pI)

40.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 18 - 84 1.9e-07 RNA recognition motif
DUF1668 PF07893 401 - 529 6.3e-06 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 115
Acc36I ACCTGC 1 cut(s) 735
Acc65I GGTACC 1 cut(s) 1421
AccB1I GGYRCC 1 cut(s) 1421
AccI GTMKAC 4 cut(s) 20, 57, 1296, 1980
AccII CGCG 1 cut(s) 1027
AccIII TCCGGA 1 cut(s) 1854
AclWI GGATC 6 cut(s) 308, 321, 606, 1328, 1341, 1968
AcoI YGGCCR 2 cut(s) 1381, 1929
AcsI RAATTY 1 cut(s) 847
AcuI CTGAAG 3 cut(s) 88, 915, 1214
AcyI GRCGYC 1 cut(s) 23
AdeI CACNNNGTG 1 cut(s) 202
AfaI GTAC 7 cut(s) 298, 395, 525, 1423, 1597, 1825, 1914
AfiI CCNNNNNNNGG 3 cut(s) 77, 277, 733
AflIII ACRYGT 1 cut(s) 592
AgsI TTSAA 6 cut(s) 583, 1151, 1588, 1758, 1886, 1946
AjnI CCWGG 2 cut(s) 1390, 1926
Alw21I GWGCWC 6 cut(s) 224, 240, 357, 442, 592, 807
Alw26I GTCTC 3 cut(s) 767, 1250, 1651
Alw44I GTGCAC 1 cut(s) 588
AlwI GGATC 6 cut(s) 308, 321, 606, 1328, 1341, 1968
AlwNI CAGNNNCTG 1 cut(s) 111
Ama87I CYCGRG 1 cut(s) 1438
Aor13HI TCCGGA 1 cut(s) 1854
AoxI GGCC 4 cut(s) 1256, 1381, 1929, 1966
ApaLI GTGCAC 1 cut(s) 588
ApeKI GCWGC 9 cut(s) 4, 29, 128, 458, 712, 754, 885, 912, 996
ApoI RAATTY 1 cut(s) 847
Asp718I GGTACC 1 cut(s) 1421
AspA2I CCTAGG 1 cut(s) 1261
AspLEI GCGC 4 cut(s) 116, 309, 954, 1027
AspS9I GGNCC 1 cut(s) 1257
AsuHPI GGTGA 7 cut(s) 92, 245, 1024, 1237, 1325, 1748, 1850
AvaI CYCGRG 1 cut(s) 1438
AvrII CCTAGG 1 cut(s) 1261
AxyI CCTNAGG 1 cut(s) 12
BaeGI GKGCMC 1 cut(s) 592
BalI TGGCCA 1 cut(s) 1931
BamHI GGATCC 2 cut(s) 313, 1333
BanI GGYRCC 1 cut(s) 1421
BanII GRGCYC 2 cut(s) 224, 240
Bbv12I GWGCWC 6 cut(s) 224, 240, 357, 442, 592, 807
BbvI GCAGC 9 cut(s) 16, 41, 115, 445, 724, 766, 897, 924, 983
BccI CCATC 8 cut(s) 70, 153, 281, 436, 1532, 1586, 1664, 1852
BceAI ACGGC 2 cut(s) 76, 1368
BcgI CGANNNNNNTGC 2 cut(s) 845, 879
BciT130I CCWGG 2 cut(s) 1392, 1928
BclI TGATCA 1 cut(s) 816
BcoDI GTCTC 3 cut(s) 767, 1250, 1651
BfaI CTAG 4 cut(s) 521, 1262, 1358, 1781
BfmI CTRYAG 4 cut(s) 728, 1141, 1300, 1375
BfoI RGCGCY 1 cut(s) 310
BfuAI ACCTGC 1 cut(s) 735
BglII AGATCT 1 cut(s) 1428
BlnI CCTAGG 1 cut(s) 1261
BlpI GCTNAGC 2 cut(s) 351, 441
Bme1390I CCNGG 2 cut(s) 1392, 1928
BmeT110I CYCGRG 1 cut(s) 1438
BmgT120I GGNCC 1 cut(s) 1257
BmiI GGNNCC 5 cut(s) 315, 1051, 1259, 1335, 1423
BmrFI CCNGG 2 cut(s) 1392, 1928
BmsI GCATC 2 cut(s) 361, 642
BoxI GACNNNNGTC 1 cut(s) 1743
BplI GAGNNNNNCTC 2 cut(s) 29, 61
Bpu10I CCTNAGC 1 cut(s) 272
Bpu1102I GCTNAGC 2 cut(s) 351, 441
BpuEI CTTGAG 1 cut(s) 238
BsaBI GATNNNNATC 1 cut(s) 1433
BsaHI GRCGYC 1 cut(s) 23
BsaI GGTCTC 1 cut(s) 767
BsaJI CCNNGG 2 cut(s) 71, 1261
BsaWI WCCGGW 4 cut(s) 155, 937, 1351, 1854
BsaXI ACNNNNNCTCC 2 cut(s) 1836, 1866
Bsc4I CCNNNNNNNGG 3 cut(s) 77, 277, 733
Bse118I RCCGGY 2 cut(s) 25, 1964
Bse21I CCTNAGG 1 cut(s) 12
Bse3DI GCAATG 1 cut(s) 335
Bse8I GATNNNNATC 1 cut(s) 1433
BseAI TCCGGA 1 cut(s) 1854
BseBI CCWGG 2 cut(s) 1392, 1928
BseDI CCNNGG 2 cut(s) 71, 1261
BseGI GGATG 6 cut(s) 40, 81, 164, 376, 1644, 1863
BseJI GATNNNNATC 1 cut(s) 1433
BseLI CCNNNNNNNGG 3 cut(s) 77, 277, 733
BseMI GCAATG 1 cut(s) 335
BseMII CTCAG 6 cut(s) 26, 198, 263, 342, 455, 1703
BseRI GAGGAG 1 cut(s) 1689
BseSI GKGCMC 1 cut(s) 592
BseX3I CGGCCG 1 cut(s) 1381
BseXI GCAGC 9 cut(s) 16, 41, 115, 445, 724, 766, 897, 924, 983
BseYI CCCAGC 3 cut(s) 276, 309, 623
BsgI GTGCAG 1 cut(s) 931
Bsh1236I CGCG 1 cut(s) 1027
Bsh1285I CGRYCG 1 cut(s) 1384
BshFI GGCC 4 cut(s) 1258, 1383, 1931, 1968
BshNI GGYRCC 1 cut(s) 1421
BsiEI CGRYCG 1 cut(s) 1384
BsiHKAI GWGCWC 6 cut(s) 224, 240, 357, 442, 592, 807
BsiHKCI CYCGRG 1 cut(s) 1438
BsiSI CCGG 8 cut(s) 26, 156, 938, 1047, 1331, 1352, 1855, 1965
BslFI GGGAC 2 cut(s) 293, 1266
BslI CCNNNNNNNGG 3 cut(s) 77, 277, 733
BsmAI GTCTC 3 cut(s) 767, 1250, 1651
BsmFI GGGAC 2 cut(s) 293, 1266
BsnI GGCC 4 cut(s) 1258, 1383, 1931, 1968
Bso31I GGTCTC 1 cut(s) 767
BsoBI CYCGRG 1 cut(s) 1438
Bsp1286I GDGCHC 6 cut(s) 224, 240, 357, 442, 592, 807
Bsp13I TCCGGA 1 cut(s) 1854
Bsp1407I TGTACA 1 cut(s) 393
Bsp1720I GCTNAGC 2 cut(s) 351, 441
BspANI GGCC 4 cut(s) 1258, 1383, 1931, 1968
BspCNI CTCAG 6 cut(s) 25, 199, 264, 343, 454, 1702
BspEI TCCGGA 1 cut(s) 1854
BspFNI CGCG 1 cut(s) 1027
BspLI GGNNCC 5 cut(s) 315, 1051, 1259, 1335, 1423
BspMAI CTGCAG 1 cut(s) 732
BspMI ACCTGC 1 cut(s) 735
BspPI GGATC 6 cut(s) 308, 321, 606, 1328, 1341, 1968
BspQI GCTCTTC 1 cut(s) 974
BspT107I GGYRCC 1 cut(s) 1421
BspTNI GGTCTC 1 cut(s) 767
BsrDI GCAATG 1 cut(s) 335
BsrFI RCCGGY 2 cut(s) 25, 1964
BsrGI TGTACA 1 cut(s) 393
BssAI RCCGGY 2 cut(s) 25, 1964
BssECI CCNNGG 2 cut(s) 71, 1261
BssNAI GTATAC 1 cut(s) 1297
BssNI GRCGYC 1 cut(s) 23
BssT1I CCWWGG 1 cut(s) 1261
Bst1107I GTATAC 1 cut(s) 1297
Bst2UI CCWGG 2 cut(s) 1392, 1928
Bst4CI ACNGT 5 cut(s) 136, 200, 296, 359, 382
Bst6I CTCTTC 1 cut(s) 974
BstACI GRCGYC 1 cut(s) 23
BstAPI GCANNNNNTGC 1 cut(s) 918
BstAUI TGTACA 1 cut(s) 393
BstDEI CTNAG 7 cut(s) 12, 207, 272, 351, 441, 1091, 1689
BstEII GGTNACC 1 cut(s) 1736
BstF5I GGATG 6 cut(s) 40, 81, 164, 376, 1644, 1863
BstFNI CGCG 1 cut(s) 1027
BstH2I RGCGCY 1 cut(s) 310
BstHHI GCGC 4 cut(s) 116, 309, 954, 1027
BstMAI GTCTC 3 cut(s) 767, 1250, 1651
BstMCI CGRYCG 1 cut(s) 1384
BstMWI GCNNNNNNNGC 5 cut(s) 148, 451, 583, 918, 964
BstNI CCWGG 2 cut(s) 1392, 1928
BstNSI RCATGY 3 cut(s) 596, 719, 870
BstPAI GACNNNNGTC 1 cut(s) 1743
BstPI GGTNACC 1 cut(s) 1736
BstSCI CCNGG 2 cut(s) 1390, 1926
BstSFI CTRYAG 4 cut(s) 728, 1141, 1300, 1375
BstSLI GKGCMC 1 cut(s) 592
BstUI CGCG 1 cut(s) 1027
BstV1I GCAGC 9 cut(s) 16, 41, 115, 445, 724, 766, 897, 924, 983
BstX2I RGATCY 4 cut(s) 313, 598, 1333, 1428
BstXI CCANNNNNNTGG 1 cut(s) 758
BstYI RGATCY 4 cut(s) 313, 598, 1333, 1428
BstZ17I GTATAC 1 cut(s) 1297
BstZI CGGCCG 1 cut(s) 1381
Bsu36I CCTNAGG 1 cut(s) 12
BsuRI GGCC 4 cut(s) 1258, 1383, 1931, 1968
BtsCI GGATG 6 cut(s) 40, 81, 164, 376, 1644, 1863
BtsIMutI CAGTG 4 cut(s) 112, 205, 282, 387
BveI ACCTGC 1 cut(s) 735
CaiI CAGNNNCTG 1 cut(s) 111
CfoI GCGC 4 cut(s) 116, 309, 954, 1027
Cfr10I RCCGGY 2 cut(s) 25, 1964
Cfr13I GGNCC 1 cut(s) 1257
CseI GACGC 2 cut(s) 31, 644
Csp6I GTAC 7 cut(s) 297, 394, 524, 1422, 1596, 1824, 1913
CviQI GTAC 7 cut(s) 297, 394, 524, 1422, 1596, 1824, 1913
DdeI CTNAG 7 cut(s) 12, 207, 272, 351, 441, 1091, 1689
DraIII CACNNNGTG 1 cut(s) 202
EaeI YGGCCR 2 cut(s) 1381, 1929
EagI CGGCCG 1 cut(s) 1381
Eam1104I CTCTTC 1 cut(s) 974
EarI CTCTTC 1 cut(s) 974
EciI GGCGGA 1 cut(s) 1951
Ecl136II GAGCTC 2 cut(s) 222, 238
EclXI CGGCCG 1 cut(s) 1381
Eco130I CCWWGG 1 cut(s) 1261
Eco24I GRGCYC 2 cut(s) 224, 240
Eco31I GGTCTC 1 cut(s) 767
Eco52I CGGCCG 1 cut(s) 1381
Eco53kI GAGCTC 2 cut(s) 222, 238
Eco57I CTGAAG 3 cut(s) 88, 915, 1214
Eco81I CCTNAGG 1 cut(s) 12
Eco88I CYCGRG 1 cut(s) 1438
Eco91I GGTNACC 1 cut(s) 1736
EcoICRI GAGCTC 2 cut(s) 222, 238
EcoO109I RGGNCCY 1 cut(s) 1257
EcoO65I GGTNACC 1 cut(s) 1736
EcoRII CCWGG 2 cut(s) 1390, 1926
EcoT14I CCWWGG 1 cut(s) 1261
EcoT38I GRGCYC 2 cut(s) 224, 240
ErhI CCWWGG 1 cut(s) 1261
FaqI GGGAC 2 cut(s) 293, 1266
FauI CCCGC 3 cut(s) 727, 951, 1805
FbaI TGATCA 1 cut(s) 816
FblI GTMKAC 4 cut(s) 20, 57, 1296, 1980
FokI GGATG 6 cut(s) 47, 88, 171, 383, 1651, 1870
FriOI GRGCYC 2 cut(s) 224, 240
FspBI CTAG 4 cut(s) 521, 1262, 1358, 1781
FspI TGCGCA 1 cut(s) 115
GlaI GCGC 4 cut(s) 115, 308, 953, 1026
GsaI CCCAGC 3 cut(s) 280, 313, 627
HaeII RGCGCY 1 cut(s) 310
HaeIII GGCC 4 cut(s) 1258, 1383, 1931, 1968
HapII CCGG 8 cut(s) 26, 156, 938, 1047, 1331, 1352, 1855, 1965
HgaI GACGC 2 cut(s) 31, 644
HhaI GCGC 4 cut(s) 116, 309, 954, 1027
Hin1I GRCGYC 1 cut(s) 23
Hin6I GCGC 4 cut(s) 114, 307, 952, 1025
HinP1I GCGC 4 cut(s) 114, 307, 952, 1025
HincII GTYRAC 3 cut(s) 21, 58, 1981
HindII GTYRAC 3 cut(s) 21, 58, 1981
HinfI GANTC 7 cut(s) 17, 40, 67, 482, 941, 1457, 1694
HpaII CCGG 8 cut(s) 26, 156, 938, 1047, 1331, 1352, 1855, 1965
HphI GGTGA 7 cut(s) 92, 245, 1024, 1237, 1325, 1748, 1850
Hpy166II GTNNAC 9 cut(s) 21, 58, 322, 590, 659, 1228, 1297, 1598, 1981
Hpy188I TCNGA 5 cut(s) 72, 261, 856, 1365, 1973
Hpy8I GTNNAC 9 cut(s) 21, 58, 322, 590, 659, 1228, 1297, 1598, 1981
Hpy99I CGWCG 3 cut(s) 25, 62, 1982
HpyAV CCTTC 5 cut(s) 1189, 1495, 1564, 1738, 1857
HpyCH4III ACNGT 5 cut(s) 136, 200, 296, 359, 382
HpyF10VI GCNNNNNNNGC 5 cut(s) 148, 451, 583, 918, 964
HpyF3I CTNAG 7 cut(s) 12, 207, 272, 351, 441, 1091, 1689
Hsp92I GRCGYC 1 cut(s) 23
HspAI GCGC 4 cut(s) 114, 307, 952, 1025
Kpn2I TCCGGA 1 cut(s) 1854
KpnI GGTACC 1 cut(s) 1425
KroI GCCGGC 2 cut(s) 25, 1964
KroNI GCCGGC 2 cut(s) 27, 1966
Ksp22I TGATCA 1 cut(s) 816
LguI GCTCTTC 1 cut(s) 974
LmnI GCTCC 6 cut(s) 50, 227, 875, 1055, 1084, 1929
Lsp1109I GCAGC 9 cut(s) 16, 41, 115, 445, 724, 766, 897, 924, 983
LweI GCATC 2 cut(s) 361, 642
MaeI CTAG 4 cut(s) 521, 1262, 1358, 1781
MaeIII GTNAC 7 cut(s) 107, 290, 415, 569, 858, 1736, 1894
MboII GAAGA 5 cut(s) 790, 908, 961, 1051, 1054
MfeI CAATTG 1 cut(s) 820
MflI RGATCY 4 cut(s) 313, 598, 1333, 1428
MhlI GDGCHC 6 cut(s) 224, 240, 357, 442, 592, 807
MlsI TGGCCA 1 cut(s) 1931
MluCI AATT 8 cut(s) 703, 745, 808, 820, 847, 1017, 1400, 1881
MluNI TGGCCA 1 cut(s) 1931
MlyI GAGTC 1 cut(s) 26
MmeI TCCRAC 1 cut(s) 348
Mox20I TGGCCA 1 cut(s) 1931
MroI TCCGGA 1 cut(s) 1854
MroNI GCCGGC 2 cut(s) 25, 1964
MscI TGGCCA 1 cut(s) 1931
MseI TTAA 1 cut(s) 669
MslI CAYNNNNRTG 1 cut(s) 1452
Msp20I TGGCCA 1 cut(s) 1931
MspA1I CMGCKG 4 cut(s) 32, 958, 996, 1380
MspI CCGG 8 cut(s) 26, 156, 938, 1047, 1331, 1352, 1855, 1965
MspR9I CCNGG 2 cut(s) 1392, 1928
MunI CAATTG 1 cut(s) 820
MvaI CCWGG 2 cut(s) 1392, 1928
MvnI CGCG 1 cut(s) 1027
MwoI GCNNNNNNNGC 5 cut(s) 148, 451, 583, 918, 964
NaeI GCCGGC 2 cut(s) 27, 1966
NgoMIV GCCGGC 2 cut(s) 25, 1964
NlaIV GGNNCC 5 cut(s) 315, 1051, 1259, 1335, 1423
NmuCI GTSAC 3 cut(s) 107, 1736, 1894
NsbI TGCGCA 1 cut(s) 115
NspI RCATGY 3 cut(s) 596, 719, 870
PaeI GCATGC 1 cut(s) 870
PaeR7I CTCGAG 1 cut(s) 1438
PciI ACATGT 1 cut(s) 592
PciSI GCTCTTC 1 cut(s) 974
PdiI GCCGGC 2 cut(s) 27, 1966
PfeI GAWTC 6 cut(s) 40, 67, 482, 941, 1457, 1694
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
PscI ACATGT 1 cut(s) 592
PshAI GACNNNNGTC 1 cut(s) 1743
Psp124BI GAGCTC 2 cut(s) 224, 240
Psp6I CCWGG 2 cut(s) 1390, 1926
PspEI GGTNACC 1 cut(s) 1736
PspFI CCCAGC 3 cut(s) 276, 309, 623
PspGI CCWGG 2 cut(s) 1390, 1926
PspN4I GGNNCC 5 cut(s) 315, 1051, 1259, 1335, 1423
PspPI GGNCC 1 cut(s) 1257
PsrI GAACNNNNNNTAC 2 cut(s) 1358, 1390
PstI CTGCAG 1 cut(s) 732
PstNI CAGNNNCTG 1 cut(s) 111
PsuI RGATCY 4 cut(s) 313, 598, 1333, 1428
PvuII CAGCTG 1 cut(s) 996
RsaI GTAC 7 cut(s) 298, 395, 525, 1423, 1597, 1825, 1914
RsaNI GTAC 7 cut(s) 297, 394, 524, 1422, 1596, 1824, 1913
RseI CAYNNNNRTG 1 cut(s) 1452
SacI GAGCTC 2 cut(s) 224, 240
SalI GTCGAC 3 cut(s) 19, 56, 1979
SapI GCTCTTC 1 cut(s) 974
SaqAI TTAA 1 cut(s) 669
Sau96I GGNCC 1 cut(s) 1257
SbfI CCTGCAGG 1 cut(s) 732
SchI GAGTC 1 cut(s) 26
ScrFI CCNGG 2 cut(s) 1392, 1928
SdaI CCTGCAGG 1 cut(s) 732
SduI GDGCHC 6 cut(s) 224, 240, 357, 442, 592, 807
SfaNI GCATC 2 cut(s) 361, 642
SfcI CTRYAG 4 cut(s) 728, 1141, 1300, 1375
Sfr274I CTCGAG 1 cut(s) 1438
SlaI CTCGAG 1 cut(s) 1438
SmiMI CAYNNNNRTG 1 cut(s) 1452
SmlI CTYRAG 2 cut(s) 217, 1438
SmoI CTYRAG 2 cut(s) 217, 1438
SphI GCATGC 1 cut(s) 870
Sse8387I CCTGCAGG 1 cut(s) 732
Sse9I AATT 8 cut(s) 703, 745, 808, 820, 847, 1017, 1400, 1881
SspI AATATT 1 cut(s) 449
SspMI CTAG 4 cut(s) 521, 1262, 1358, 1781
SstI GAGCTC 2 cut(s) 224, 240
StyD4I CCNGG 2 cut(s) 1390, 1926
StyI CCWWGG 1 cut(s) 1261
TaaI ACNGT 5 cut(s) 136, 200, 296, 359, 382
TasI AATT 8 cut(s) 703, 745, 808, 820, 847, 1017, 1400, 1881
TatI WGTACW 2 cut(s) 393, 523
TauI GCSGC 2 cut(s) 1383, 1571
TfiI GAWTC 6 cut(s) 40, 67, 482, 941, 1457, 1694
Tru1I TTAA 1 cut(s) 669
Tru9I TTAA 1 cut(s) 669
TscAI CASTG 4 cut(s) 112, 205, 289, 387
TseFI GTSAC 3 cut(s) 107, 1736, 1894
TseI GCWGC 9 cut(s) 4, 29, 128, 458, 712, 754, 885, 912, 996
Tsp45I GTSAC 3 cut(s) 107, 1736, 1894
TspDTI ATGAA 4 cut(s) 1124, 1470, 1546, 1905
TspGWI ACGGA 3 cut(s) 1245, 1609, 1966
TspRI CASTG 4 cut(s) 112, 205, 289, 387
VneI GTGCAC 1 cut(s) 588
XapI RAATTY 1 cut(s) 847
XceI RCATGY 3 cut(s) 596, 719, 870
XhoI CTCGAG 1 cut(s) 1438
XmaJI CCTAGG 1 cut(s) 1261
XmiI GTMKAC 4 cut(s) 20, 57, 1296, 1980
XspI CTAG 4 cut(s) 521, 1262, 1358, 1781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.