Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000753

Physical Location & Seq

Genomic Coordinates Forward (+)

66892389 .. 66895354

Gene Structure 2966 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG449700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGGAGCACACGACGGCAGCCAATTCCCACGCCGATGAGATCCGATCCCTACGCGTCGAGGGCTTGCTGCCAGAGATGGATGCGAAATATCTCTATGGCTGCTTCAGTGATCACGGCCAGGTTGTAGCTGCCACTGTTTTGCATAATGTGAGAACTGGTTTTGTTGAGTTTACTTCTCGGAGCTGGGCTGAGATGATCTTGAAGTCCTACAGTGGTCACGGGATGCCAAACTTCAATCAGAGATACCGCCTGAAATGGGATGTGGATTCTGCCGGTATGATGTGGCGCTGGGATTATGCTTACGAGCGTTGTTCGTACTTTGGTTTTAATGATGCAGGTAGAGAATTGAACGCCAACAAAGCGCTCTTGAGATACAAGCACTTGATACCTGCTGTAAATGAAAAGCCAGCTGCTGCTGCTGGTCAGCAACATCAGGAAGGTGAGTCTGATTTAGTAAATCAGAATTGTGAAGCGATTCTCTACGAGGAGTGGTGCAAGGAGAGGTTTCTGTATCTATGTATGGAGGAATTGTGTAAGGAAAAAGACGGTTGTTACGTTATCCGCACCCTCAAGTTGTCGAACTTGTTGTCATGCTCTTGCAAGTTTGATGAAAAGATTGGAAAAATAATCACCTGCTGCCACTGCGCCTCCTGCAACGTGCCATTTGAGTTGCAAAAGCGGGCTTGGCTACGCACCACGAACTTCCGCAGCAAGAAAATGAAAATTCCGAGGCTTATGGGATGCGCTTCTTATTCCGGCGGAATCATGTTCGCCGGCGGCATGGACCAGTCACCAGATCAAACTCGAGCTCCTTACTTTGTGCCGAGTCAAAAATGTTTTTATTTTAAGCCGACAGATATTTGCCACGATTATTCCGAGTGGATAAGGCTTCCTAAGGATCTCAAAAGCGGGAAACAGGAGGCCCTGCTGGTTAACGTTGATGGAAGTCTCTATTGTCTCTCTGGTTTACTCGTTGGTCAGCAGGTCGTTCATCCTACTTTTGAGGTGTACAATCGCGATTACGGGAGATGGGTGCCTCTGCCGGATCCTCCTTTTTACAGACCCGAAGCACTGAATTACAAACACGGTGACCCTAGGCCTGGTACACACTTGTCTTATGCAATCATGGGCACCAAGCTTTTGGTCTCGAGCAAGATCCCTGGTTCAGATTCCCCTCACTTTCCCGTTTGTTGCTTTGACGTTGAGGAAAAAAAGTGGACAGAGGTCACAACCTTGTTCAATGGTAAGCCTTTTCCCTTCCGACGCAGGGCTTTAGTGGTCGACTTGGAGGATGGTACCCATGATAAGGTCATGTTTTACTTCAATAATTATTTTGCTATAAGAGTCTGCCGATTAGTAGTTAATGAGGATGATGGTAGTATTAAGAACTCACCGCACCAACCTCTGGGGATTGATACCCTCATGACTAGCTTATTGGAAATTACCATTCAAAATCAGTCAATGGTGAAAATGTCGTGGGATTTTGTTGATCTAGGAAATAAAAAAGTCTGCTTTGTTTTGTCCTCGAGCCTCCCGGAAGTGAGAGACGACGAGAGTGCCTGTCATCGCCAGACCTTGCGTCTTCTTATCTTGGTAATTCAATTTCAAGTTTTGGAATCAGGAGATTTCTCCTTCAAGTTCCTGGCTACTCGCAGCTTTGAATACCAGGGCCATTTCCCTCGCATCTGGCACCCCAATCTGCAGGGGCTAAACTTTTCCAACAGCGGCGGCACCAAGCCCCTTGAGCCAATCGGGTATGAGTTGGCGCTGGGATTATATATGGTTACGAGTGTTGCTCCTACTTTGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00020 ko00190 ko01100 ko01110 ko01120 ko01130 ko01200 ko03015 ko03040 ko04714 ko04932 ko05010 ko05012 ko05016 map00020 map00190 map01100 map01110 map01120 map01130 map01200 map03015 map03040 map04714 map04932 map05010 map05012 map05016

Pfam Domains

Protein Families

RRM_1

Protein Analysis

603

Amino Acids

68.84

Weight (kDa)

6.99

Isoelectric Point (pI)

41.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1668	PF07893	294 - 427	1.1e-09	Protein of unknown function (DUF1668)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000753)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g26720 FvH4_7g27001 FvH4_7g27001 FvH4_7g27001 FvH4_7g31210 FvH4_7g31211 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31310 FvH4_7g31320 FvH4_7g31670 FvH4_7g31670 FvH4_7g31681 FvH4_7g31682
rosa_chinensis	RchiOBHm_Chr1g0337091 RchiOBHm_Chr1g0337131 RchiOBHm_Chr1g0380941
rosa_laevigata	RLG00000026258 RLG00000026260 RLG00000026268 RLG00000026269 RLG00000029305
rosa_multiflora	Rmu_co8190652.1_g000001 Rmu_co8273449.1_g000001 Rmu_co8310417.1_g000001 Rmu_sc0002160.1_g000028 Rmu_sc0002160.1_g000031 Rmu_sc0002962.1_g000022 Rmu_sc0004623.1_g000006 Rmu_sc0004623.1_g000007 Rmu_sc0013826.1_g000002 Rmu_sc0013826.1_g000003 Rmu_sc0020974.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105360 Rroxscaffold_4G00314970 Rroxscaffold_6G00413200
rosa_rugosa	Rorug01G0131100 Rorug01G0423200 Rorug01G0424100
rosa_samantha	Rh1AG151800 Rh1AG152100 Rh1AG447500 Rh1AG447600 Rh1AG448600 Rh1AG449500 Rh1AG449700 Rh1BG119600 Rh1BG404200 Rh1BG405400 Rh1CG143000 Rh1CG418300 Rh1DG159000 Rh1DG159300 Rh1DG159400 Rh1DG434600 Rh1DG435500 Rh1DG435900
rosa_wichuraiana	Rw0G005920 Rw0G005960 Rw0G005970 Rw1G012410 Rw1G012420 Rw1G038950 Rw1G039110 Rw1G039170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	641
Acc36I	ACCTGC	4 cut(s)	326, 397, 641, 973
Acc65I	GGTACC	1 cut(s)	1295
AccB1I	GGYRCC	5 cut(s)	1033, 1130, 1295, 1689, 1730
AccB7I	CCANNNNNTGG	1 cut(s)	1405
AccI	GTMKAC	1 cut(s)	1281
AccII	CGCG	2 cut(s)	54, 1017
AclI	AACGTT	1 cut(s)	936
AclWI	GGATC	6 cut(s)	34, 39, 906, 1040, 1053, 1150
AcoI	YGGCCR	1 cut(s)	115
AcsI	RAATTY	1 cut(s)	723
AcuI	CTGAAG	1 cut(s)	88
AfaI	GTAC	4 cut(s)	317, 1010, 1105, 1297
AfeI	AGCGCT	1 cut(s)	363
AfiI	CCNNNNNNNGG	5 cut(s)	256, 1100, 1267, 1306, 1405
AflIII	ACRYGT	1 cut(s)	52
AhdI	GACNNNNNGTC	1 cut(s)	1578
AjnI	CCWGG	5 cut(s)	117, 1099, 1159, 1641, 1665
AluBI	AGCT	7 cut(s)	128, 183, 410, 809, 1138, 1431, 1656
AluI	AGCT	7 cut(s)	128, 183, 410, 809, 1138, 1431, 1656
Alw21I	GWGCWC	2 cut(s)	9, 811
Alw26I	GTCTC	4 cut(s)	953, 962, 1150, 1539
AlwI	GGATC	6 cut(s)	34, 39, 906, 1040, 1053, 1150
AlwNI	CAGNNNCTG	1 cut(s)	413
Ama87I	CYCGRG	3 cut(s)	804, 1147, 1525
Aor51HI	AGCGCT	1 cut(s)	363
AoxI	GGCC	4 cut(s)	115, 921, 1097, 1669
ApoI	RAATTY	1 cut(s)	723
ArsI	GACNNNNNNTTYG	2 cut(s)	572, 604
Asp700I	GAANNNNTTC	1 cut(s)	474
Asp718I	GGTACC	1 cut(s)	1295
AspA2I	CCTAGG	1 cut(s)	1094
AspLEI	GCGC	5 cut(s)	288, 364, 647, 746, 1768
AspS9I	GGNCC	3 cut(s)	784, 922, 1669
AsuC2I	CCSGG	1 cut(s)	1535
AsuHPI	GGTGA	6 cut(s)	452, 622, 783, 1100, 1383, 1477
AvaI	CYCGRG	3 cut(s)	804, 1147, 1525
AvaII	GGWCC	1 cut(s)	784
AvrII	CCTAGG	1 cut(s)	1094
AxyI	CCTNAGG	1 cut(s)	894
BaeGI	GKGCMC	1 cut(s)	1133
BamHI	GGATCC	1 cut(s)	1045
BanI	GGYRCC	5 cut(s)	1033, 1130, 1295, 1689, 1730
BanII	GRGCYC	1 cut(s)	811
BbsI	GAAGAC	1 cut(s)	1574
Bbv12I	GWGCWC	2 cut(s)	9, 811
BccI	CCATC	5 cut(s)	70, 935, 1023, 1286, 1367
BceAI	ACGGC	2 cut(s)	30, 130
BcgI	CGANNNNNNTGC	2 cut(s)	1538, 1572
BciT130I	CCWGG	5 cut(s)	119, 1101, 1161, 1643, 1667
BclI	TGATCA	1 cut(s)	109
BcnI	CCSGG	1 cut(s)	1535
BcoDI	GTCTC	4 cut(s)	953, 962, 1150, 1539
BfaI	CTAG	3 cut(s)	1095, 1428, 1493
BfmI	CTRYAG	2 cut(s)	208, 1700
BfoI	RGCGCY	3 cut(s)	289, 365, 1769
BfuAI	ACCTGC	4 cut(s)	326, 397, 641, 973
BlnI	CCTAGG	1 cut(s)	1094
Bme1390I	CCNGG	6 cut(s)	119, 1101, 1161, 1535, 1643, 1667
Bme18I	GGWCC	1 cut(s)	784
BmeRI	GACNNNNNGTC	1 cut(s)	1578
BmeT110I	CYCGRG	3 cut(s)	804, 1147, 1525
BmgT120I	GGNCC	3 cut(s)	784, 922, 1669
BmiI	GGNNCC	6 cut(s)	1035, 1047, 1132, 1297, 1691, 1732
BmrFI	CCNGG	6 cut(s)	119, 1101, 1161, 1535, 1643, 1667
BmsI	GCATC	5 cut(s)	70, 213, 322, 731, 1692
BoxI	GACNNNNGTC	1 cut(s)	1223
BpiI	GAAGAC	1 cut(s)	1574
BplI	GAGNNNNNCTC	2 cut(s)	1780, 1812
BpuEI	CTTGAG	3 cut(s)	388, 554, 1763
BpuMI	CCSGG	1 cut(s)	1535
BsaI	GGTCTC	1 cut(s)	1150
BsaJI	CCNNGG	4 cut(s)	728, 1094, 1159, 1666
BsaXI	ACNNNNNCTCC	6 cut(s)	515, 545, 632, 662, 793, 823
Bsc4I	CCNNNNNNNGG	5 cut(s)	256, 1100, 1267, 1306, 1405
Bse118I	RCCGGY	2 cut(s)	272, 773
Bse1I	ACTGG	2 cut(s)	160, 787
Bse21I	CCTNAGG	1 cut(s)	894
BseBI	CCWGG	5 cut(s)	119, 1101, 1161, 1643, 1667
BseDI	CCNNGG	4 cut(s)	728, 1094, 1159, 1666
BseGI	GGATG	7 cut(s)	85, 228, 265, 746, 991, 1297, 1375
BseLI	CCNNNNNNNGG	5 cut(s)	256, 1100, 1267, 1306, 1405
BseMII	CTCAG	1 cut(s)	180
BseNI	ACTGG	2 cut(s)	160, 787
BseRI	GAGGAG	1 cut(s)	500
BseSI	GKGCMC	1 cut(s)	1133
BseYI	CCCAGC	3 cut(s)	183, 288, 1768
Bsh1236I	CGCG	2 cut(s)	54, 1017
BshFI	GGCC	4 cut(s)	117, 923, 1099, 1671
BshNI	GGYRCC	5 cut(s)	1033, 1130, 1295, 1689, 1730
BsiHKAI	GWGCWC	2 cut(s)	9, 811
BsiHKCI	CYCGRG	3 cut(s)	804, 1147, 1525
BsiSI	CCGG	5 cut(s)	273, 756, 774, 1043, 1535
BslI	CCNNNNNNNGG	5 cut(s)	256, 1100, 1267, 1306, 1405
BsmAI	GTCTC	4 cut(s)	953, 962, 1150, 1539
BsmBI	CGTCTC	1 cut(s)	1539
BsnI	GGCC	4 cut(s)	117, 923, 1099, 1671
Bso31I	GGTCTC	1 cut(s)	1150
BsoBI	CYCGRG	3 cut(s)	804, 1147, 1525
Bsp1286I	GDGCHC	3 cut(s)	9, 811, 1133
Bsp1407I	TGTACA	1 cut(s)	1008
Bsp143I	GATC	9 cut(s)	39, 44, 109, 195, 796, 898, 1045, 1155, 1489
Bsp68I	TCGCGA	1 cut(s)	1017
BspANI	GGCC	4 cut(s)	117, 923, 1099, 1671
BspCNI	CTCAG	1 cut(s)	181
BspFNI	CGCG	2 cut(s)	54, 1017
BspHI	TCATGA	1 cut(s)	1422
BspLI	GGNNCC	6 cut(s)	1035, 1047, 1132, 1297, 1691, 1732
BspMAI	CTGCAG	1 cut(s)	1704
BspMI	ACCTGC	4 cut(s)	326, 397, 641, 973
BspPI	GGATC	6 cut(s)	34, 39, 906, 1040, 1053, 1150
BspT107I	GGYRCC	5 cut(s)	1033, 1130, 1295, 1689, 1730
BspTNI	GGTCTC	1 cut(s)	1150
BsrFI	RCCGGY	2 cut(s)	272, 773
BsrGI	TGTACA	1 cut(s)	1008
BsrI	ACTGG	2 cut(s)	160, 787
BssAI	RCCGGY	2 cut(s)	272, 773
BssECI	CCNNGG	4 cut(s)	728, 1094, 1159, 1666
BssMI	GATC	9 cut(s)	39, 44, 109, 195, 796, 898, 1045, 1155, 1489
BssT1I	CCWWGG	1 cut(s)	1094
Bst2UI	CCWGG	5 cut(s)	119, 1101, 1161, 1643, 1667
Bst4CI	ACNGT	4 cut(s)	136, 212, 548, 1088
BstAUI	TGTACA	1 cut(s)	1008
BstC8I	GCNNGC	4 cut(s)	65, 408, 681, 775
BstDEI	CTNAG	2 cut(s)	189, 894
BstEII	GGTNACC	1 cut(s)	1088
BstF5I	GGATG	7 cut(s)	85, 228, 265, 746, 991, 1297, 1375
BstFNI	CGCG	2 cut(s)	54, 1017
BstH2I	RGCGCY	3 cut(s)	289, 365, 1769
BstHHI	GCGC	5 cut(s)	288, 364, 647, 746, 1768
BstKTI	GATC	9 cut(s)	42, 47, 112, 198, 799, 901, 1048, 1158, 1492
BstMAI	GTCTC	4 cut(s)	953, 962, 1150, 1539
BstMBI	GATC	9 cut(s)	39, 44, 109, 195, 796, 898, 1045, 1155, 1489
BstMWI	GCNNNNNNNGC	7 cut(s)	60, 359, 416, 642, 651, 685, 1744
BstNI	CCWGG	5 cut(s)	119, 1101, 1161, 1643, 1667
BstPAI	GACNNNNGTC	1 cut(s)	1223
BstPI	GGTNACC	1 cut(s)	1088
BstSCI	CCNGG	6 cut(s)	117, 1099, 1159, 1533, 1641, 1665
BstSFI	CTRYAG	2 cut(s)	208, 1700
BstSLI	GKGCMC	1 cut(s)	1133
BstUI	CGCG	2 cut(s)	54, 1017
BstV2I	GAAGAC	1 cut(s)	1574
BstX2I	RGATCY	4 cut(s)	39, 898, 1045, 1155
BstXI	CCANNNNNNTGG	1 cut(s)	1141
BstYI	RGATCY	4 cut(s)	39, 898, 1045, 1155
Bsu36I	CCTNAGG	1 cut(s)	894
BsuRI	GGCC	4 cut(s)	117, 923, 1099, 1671
BtgZI	GCGATG	1 cut(s)	1550
BtsCI	GGATG	7 cut(s)	85, 228, 265, 746, 991, 1297, 1375
BtsI	GCAGTG	1 cut(s)	640
BtsIMutI	CAGTG	5 cut(s)	112, 132, 217, 640, 1070
BtuMI	TCGCGA	1 cut(s)	1017
BveI	ACCTGC	4 cut(s)	326, 397, 641, 973
Cac8I	GCNNGC	4 cut(s)	65, 408, 681, 775
CaiI	CAGNNNCTG	1 cut(s)	413
CciI	TCATGA	1 cut(s)	1422
CfoI	GCGC	5 cut(s)	288, 364, 647, 746, 1768
Cfr10I	RCCGGY	2 cut(s)	272, 773
Cfr13I	GGNCC	3 cut(s)	784, 922, 1669
CseI	GACGC	3 cut(s)	43, 1272, 1568
Csp6I	GTAC	4 cut(s)	316, 1009, 1104, 1296
CviAII	CATG	7 cut(s)	591, 766, 781, 1126, 1301, 1312, 1423
CviQI	GTAC	4 cut(s)	316, 1009, 1104, 1296
DdeI	CTNAG	2 cut(s)	189, 894
DpnI	GATC	9 cut(s)	41, 46, 111, 197, 798, 900, 1047, 1157, 1491
DpnII	GATC	9 cut(s)	39, 44, 109, 195, 796, 898, 1045, 1155, 1489
DriI	GACNNNNNGTC	1 cut(s)	1578
EaeI	YGGCCR	1 cut(s)	115
Eam1105I	GACNNNNNGTC	1 cut(s)	1578
EciI	GGCGGA	1 cut(s)	774
Ecl136II	GAGCTC	1 cut(s)	809
Eco130I	CCWWGG	1 cut(s)	1094
Eco147I	AGGCCT	1 cut(s)	1099
Eco24I	GRGCYC	1 cut(s)	811
Eco31I	GGTCTC	1 cut(s)	1150
Eco47I	GGWCC	1 cut(s)	784
Eco47III	AGCGCT	1 cut(s)	363
Eco53kI	GAGCTC	1 cut(s)	809
Eco57I	CTGAAG	1 cut(s)	88
Eco81I	CCTNAGG	1 cut(s)	894
Eco88I	CYCGRG	3 cut(s)	804, 1147, 1525
Eco91I	GGTNACC	1 cut(s)	1088
EcoICRI	GAGCTC	1 cut(s)	809
EcoO109I	RGGNCCY	1 cut(s)	922
EcoO65I	GGTNACC	1 cut(s)	1088
EcoRII	CCWGG	5 cut(s)	117, 1099, 1159, 1641, 1665
EcoT14I	CCWWGG	1 cut(s)	1094
EcoT38I	GRGCYC	1 cut(s)	811
ErhI	CCWWGG	1 cut(s)	1094
Esp3I	CGTCTC	1 cut(s)	1539
FaeI	CATG	7 cut(s)	594, 769, 784, 1129, 1304, 1315, 1426
FatI	CATG	7 cut(s)	590, 765, 780, 1125, 1300, 1311, 1422
FauI	CCCGC	2 cut(s)	672, 902
FbaI	TGATCA	1 cut(s)	109
FblI	GTMKAC	1 cut(s)	1281
FokI	GGATG	7 cut(s)	92, 235, 272, 753, 978, 1304, 1382
FriOI	GRGCYC	1 cut(s)	811
FspBI	CTAG	3 cut(s)	1095, 1428, 1493
GlaI	GCGC	5 cut(s)	287, 363, 646, 745, 1767
GsaI	CCCAGC	3 cut(s)	187, 292, 1772
HaeII	RGCGCY	3 cut(s)	289, 365, 1769
HaeIII	GGCC	4 cut(s)	117, 923, 1099, 1671
HapII	CCGG	5 cut(s)	273, 756, 774, 1043, 1535
HgaI	GACGC	3 cut(s)	43, 1272, 1568
HhaI	GCGC	5 cut(s)	288, 364, 647, 746, 1768
Hin1II	CATG	7 cut(s)	594, 769, 784, 1129, 1304, 1315, 1426
Hin6I	GCGC	5 cut(s)	286, 362, 645, 744, 1766
HinP1I	GCGC	5 cut(s)	286, 362, 645, 744, 1766
HincII	GTYRAC	2 cut(s)	934, 1282
HindII	GTYRAC	2 cut(s)	934, 1282
HindIII	AAGCTT	1 cut(s)	1136
HinfI	GANTC	8 cut(s)	266, 443, 475, 762, 826, 1169, 1344, 1616
HpaI	GTTAAC	1 cut(s)	934
HpaII	CCGG	5 cut(s)	273, 756, 774, 1043, 1535
HphI	GGTGA	6 cut(s)	452, 622, 783, 1100, 1383, 1477
Hpy166II	GTNNAC	7 cut(s)	171, 934, 968, 1009, 1106, 1218, 1282
Hpy188I	TCNGA	9 cut(s)	44, 180, 240, 448, 462, 729, 877, 1168, 1262
Hpy188III	TCNNGA	7 cut(s)	199, 367, 434, 1016, 1147, 1423, 1620
Hpy8I	GTNNAC	7 cut(s)	171, 934, 968, 1009, 1106, 1218, 1282
Hpy99I	CGWCG	4 cut(s)	16, 59, 1266, 1553
HpyAV	CCTTC	3 cut(s)	431, 1267, 1642
HpyCH4III	ACNGT	4 cut(s)	136, 212, 548, 1088
HpyCH4IV	ACGT	4 cut(s)	555, 657, 936, 1200
HpyCH4V	TGCA	8 cut(s)	142, 335, 495, 600, 654, 673, 1121, 1702
HpyF10VI	GCNNNNNNNGC	7 cut(s)	60, 359, 416, 642, 651, 685, 1744
HpyF3I	CTNAG	2 cut(s)	189, 894
HpySE526I	ACGT	4 cut(s)	555, 657, 936, 1200
Hsp92II	CATG	7 cut(s)	594, 769, 784, 1129, 1304, 1315, 1426
HspAI	GCGC	5 cut(s)	286, 362, 645, 744, 1766
KpnI	GGTACC	1 cut(s)	1299
KroI	GCCGGC	1 cut(s)	773
KroNI	GCCGGC	1 cut(s)	775
Ksp22I	TGATCA	1 cut(s)	109
KspAI	GTTAAC	1 cut(s)	934
Kzo9I	GATC	9 cut(s)	39, 44, 109, 195, 796, 898, 1045, 1155, 1489
LmnI	GCTCC	4 cut(s)	4, 180, 814, 1801
LweI	GCATC	5 cut(s)	70, 213, 322, 731, 1692
MaeI	CTAG	3 cut(s)	1095, 1428, 1493
MaeII	ACGT	4 cut(s)	555, 657, 936, 1200
MaeIII	GTNAC	6 cut(s)	215, 551, 789, 1088, 1225, 1783
MalI	GATC	9 cut(s)	41, 46, 111, 197, 798, 900, 1047, 1157, 1491
MboI	GATC	9 cut(s)	39, 44, 109, 195, 796, 898, 1045, 1155, 1489
MboII	GAAGA	1 cut(s)	1574
MflI	RGATCY	4 cut(s)	39, 898, 1045, 1155
MhlI	GDGCHC	3 cut(s)	9, 811, 1133
MluI	ACGCGT	1 cut(s)	52
MlyI	GAGTC	3 cut(s)	452, 835, 1353
MmeI	TCCRAC	2 cut(s)	1285, 1743
MreI	CGCCGGCG	1 cut(s)	773
MroNI	GCCGGC	1 cut(s)	773
MroXI	GAANNNNTTC	1 cut(s)	474
MseI	TTAA	5 cut(s)	327, 846, 933, 1362, 1383
MslI	CAYNNNNRTG	1 cut(s)	33
MspA1I	CMGCKG	2 cut(s)	410, 1725
MspI	CCGG	5 cut(s)	273, 756, 774, 1043, 1535
MspR9I	CCNGG	6 cut(s)	119, 1101, 1161, 1535, 1643, 1667
MvaI	CCWGG	5 cut(s)	119, 1101, 1161, 1643, 1667
MvnI	CGCG	2 cut(s)	54, 1017
MwoI	GCNNNNNNNGC	7 cut(s)	60, 359, 416, 642, 651, 685, 1744
NaeI	GCCGGC	1 cut(s)	775
NciI	CCSGG	1 cut(s)	1535
NdeII	GATC	9 cut(s)	39, 44, 109, 195, 796, 898, 1045, 1155, 1489
NgoMIV	GCCGGC	1 cut(s)	773
NlaIII	CATG	7 cut(s)	594, 769, 784, 1129, 1304, 1315, 1426
NlaIV	GGNNCC	6 cut(s)	1035, 1047, 1132, 1297, 1691, 1732
NmeAIII	GCCGAG	1 cut(s)	849
NmuCI	GTSAC	4 cut(s)	215, 789, 1088, 1225
NruI	TCGCGA	1 cut(s)	1017
PaeR7I	CTCGAG	3 cut(s)	804, 1147, 1525
PagI	TCATGA	1 cut(s)	1422
PaqCI	CACCTGC	1 cut(s)	641
PceI	AGGCCT	1 cut(s)	1099
PcsI	WCGNNNNNNNCGW	2 cut(s)	552, 873
PdiI	GCCGGC	1 cut(s)	775
PdmI	GAANNNNTTC	1 cut(s)	474
PfeI	GAWTC	5 cut(s)	266, 475, 762, 1169, 1616
PflMI	CCANNNNNTGG	1 cut(s)	1405
PfoI	TCCNGGA	1 cut(s)	1533
PleI	GAGTC	3 cut(s)	451, 834, 1352
PpsI	GAGTC	3 cut(s)	451, 834, 1352
PshAI	GACNNNNGTC	1 cut(s)	1223
Psp124BI	GAGCTC	1 cut(s)	811
Psp1406I	AACGTT	1 cut(s)	936
Psp6I	CCWGG	5 cut(s)	117, 1099, 1159, 1641, 1665
PspEI	GGTNACC	1 cut(s)	1088
PspFI	CCCAGC	3 cut(s)	183, 288, 1768
PspGI	CCWGG	5 cut(s)	117, 1099, 1159, 1641, 1665
PspN4I	GGNNCC	6 cut(s)	1035, 1047, 1132, 1297, 1691, 1732
PspPI	GGNCC	3 cut(s)	784, 922, 1669
PspXI	VCTCGAGB	2 cut(s)	804, 1525
PstI	CTGCAG	1 cut(s)	1704
PstNI	CAGNNNCTG	1 cut(s)	413
PsuI	RGATCY	4 cut(s)	39, 898, 1045, 1155
PvuII	CAGCTG	1 cut(s)	410
RruI	TCGCGA	1 cut(s)	1017
RsaI	GTAC	4 cut(s)	317, 1010, 1105, 1297
RsaNI	GTAC	4 cut(s)	316, 1009, 1104, 1296
RseI	CAYNNNNRTG	1 cut(s)	33
SacI	GAGCTC	1 cut(s)	811
SalI	GTCGAC	1 cut(s)	1280
SaqAI	TTAA	5 cut(s)	327, 846, 933, 1362, 1383
Sau3AI	GATC	9 cut(s)	39, 44, 109, 195, 796, 898, 1045, 1155, 1489
Sau96I	GGNCC	3 cut(s)	784, 922, 1669
SchI	GAGTC	3 cut(s)	452, 835, 1353
ScrFI	CCNGG	6 cut(s)	119, 1101, 1161, 1535, 1643, 1667
SduI	GDGCHC	3 cut(s)	9, 811, 1133
SfaNI	GCATC	5 cut(s)	70, 213, 322, 731, 1692
SfcI	CTRYAG	2 cut(s)	208, 1700
Sfr274I	CTCGAG	3 cut(s)	804, 1147, 1525
SgrAI	CRCCGGYG	1 cut(s)	773
SinI	GGWCC	1 cut(s)	784
SlaI	CTCGAG	3 cut(s)	804, 1147, 1525
SmiMI	CAYNNNNRTG	1 cut(s)	33
SmlI	CTYRAG	6 cut(s)	367, 569, 804, 1147, 1525, 1742
SmoI	CTYRAG	6 cut(s)	367, 569, 804, 1147, 1525, 1742
SseBI	AGGCCT	1 cut(s)	1099
SspMI	CTAG	3 cut(s)	1095, 1428, 1493
SstI	GAGCTC	1 cut(s)	811
StuI	AGGCCT	1 cut(s)	1099
StyD4I	CCNGG	6 cut(s)	117, 1099, 1159, 1533, 1641, 1665
StyI	CCWWGG	1 cut(s)	1094
TaaI	ACNGT	4 cut(s)	136, 212, 548, 1088
TaiI	ACGT	4 cut(s)	558, 660, 939, 1203
TaqI	TCGA	6 cut(s)	57, 578, 805, 1148, 1281, 1526
TatI	WGTACW	1 cut(s)	1008
TauI	GCSGC	3 cut(s)	780, 1728, 1731
TfiI	GAWTC	5 cut(s)	266, 475, 762, 1169, 1616
Tru1I	TTAA	5 cut(s)	327, 846, 933, 1362, 1383
Tru9I	TTAA	5 cut(s)	327, 846, 933, 1362, 1383
TscAI	CASTG	5 cut(s)	112, 139, 217, 647, 1077
TseFI	GTSAC	4 cut(s)	215, 789, 1088, 1225
Tsp45I	GTSAC	4 cut(s)	215, 789, 1088, 1225
TspDTI	ATGAA	4 cut(s)	414, 624, 734, 980
TspRI	CASTG	5 cut(s)	112, 139, 217, 647, 1077
Van91I	CCANNNNNTGG	1 cut(s)	1405
VpaK11BI	GGWCC	1 cut(s)	784
XapI	RAATTY	1 cut(s)	723
XhoI	CTCGAG	3 cut(s)	804, 1147, 1525
XmaJI	CCTAGG	1 cut(s)	1094
XmiI	GTMKAC	1 cut(s)	1281
XmnI	GAANNNNTTC	1 cut(s)	474
XspI	CTAG	3 cut(s)	1095, 1428, 1493

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.