Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0000753

Physical Location & Seq

Genomic Coordinates Forward (+)

52781794 .. 52783227

Gene Structure 1434 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG405400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGGAGCACACGGCGGCAGCCAATTCCAACTCCGATGAGATCCGATCCCTACGCGTCGAGGGCTTGCTGCCAGAGATGGATGCGAAATACCTCTATGGCTGCTTCAGTGATCACGGCCAGGTTGTAGCTGCCACTGTTTTGCATAATGTGAGAACTGGTTTTGTTGAGTTTGCTTCTCGGAGCTGGGCTGAGATGATCTTGAAGTCCTACAATGGTCACGGGATGCCAAACTTCAATCAGAGATACCGCCTGAAATGGGATATGGATTCTGCCGGTATGATGTGGCGCTGGGATTATGCTTACGAGCGTTGTTCGTACTTTGGTTTTAATGATGCAGGTAGAGAATTGAACGCCAACAAAGCGCTCTTGAGATACAAGCACTTGATACCTGCTGTAAATGAAAAGCCAGCTGCTGCTGCTGCTGGTCAGCAACATCAGGAAGGTGAGTCTGATTTAGTAAATCAGAATTGTGAAGCGATTCTCTACGACGAGTGGTGCAAGGAGAGGTTTCTGTATCTATGTATGGAGGAATTGTGTGCGGAAACAGACGGTTGTTACGTTATCCGCACCCTCAAGTTGTCGAACTTGTTGTCATGCTCTTGCAAGTTTGATGAAAAGATTGGAAAAATAATCACCTGCCGCCATTGCGCCTCCTGCAACGTGCCATTTGAATTGCAAAAGCGGGCTTGGCTACGCACCACGGACTTCCGCAGCAAGAACATGAAAATTCCGGAGCAAATGGGTTGCGCTTCTTATTCTGGAGGAATCATGTTCGCCGGCGGCCTGGACGAATCACCAGATCAAACTCAAGCTCCTTACTTTGGGCCGAGTCGAAAATGTTATTTTTTTAAGCCGGGAGATATTTCCAACGATGATCCCGACTGGATAAGGCTTCCTTCCGATATGAAAAGCGGGAAACCGGAGGCCCTGCTGGTTAACGTTGATGGAAGTCTCTATTGTCTCTCTGGTTTACTCATTTATCAGCCTGTCGTTCATCCTACTTTTGAGGTGTACAATCGCAATTACGAGAGATGGGTGCCTCTGCCGGATCCTCCTTTTTACAGACCCGAAGCACTGAATTACAAACACGGTGACCCTAGGCCTGGTACACACTTGTCTTATGCAATCATGGGCACCAAGCTTTTGGTCTCGAGCAAGATCCCTGGTTCAGGCTCCCCTCACTTTCCCGTTTGTTGCTTTGACGTTGAGGAAAAAAAGTGGACAGAGGTCACTACCTTGTTCGATGGTAAGCCTTTTCCCTTCCGACGCGGGGCTTTAGTGGTCGACTTGGAGGAAGGTACCCATGATAAGGTCATGTTTTACTTCAATAATTATTTTGCTATAAGAGCCTGCCGATTAGTAGTTAATGAGGATGATGGTAGTATTAAGAACTCACCCCCCCCAATCTTTGGGGATCGATTCCCTCATGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00020 ko00190 ko01100 ko01110 ko01120 ko01130 ko01200 ko03015 ko03040 ko04714 ko04932 ko05010 ko05012 ko05016 map00020 map00190 map01100 map01110 map01120 map01130 map01200 map03015 map03040 map04714 map04932 map05010 map05012 map05016

Pfam Domains

Protein Families

RRM_1

Protein Analysis

477

Amino Acids

54.32

Weight (kDa)

5.95

Isoelectric Point (pI)

39.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	17 - 77	8.4e-06	RNA recognition motif
DUF1668	PF07893	297 - 425	1.4e-08	Protein of unknown function (DUF1668)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000753)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g26720 FvH4_7g27001 FvH4_7g27001 FvH4_7g27001 FvH4_7g31210 FvH4_7g31211 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31310 FvH4_7g31320 FvH4_7g31670 FvH4_7g31670 FvH4_7g31681 FvH4_7g31682
rosa_chinensis	RchiOBHm_Chr1g0337091 RchiOBHm_Chr1g0337131 RchiOBHm_Chr1g0380941
rosa_laevigata	RLG00000026258 RLG00000026260 RLG00000026268 RLG00000026269 RLG00000029305
rosa_multiflora	Rmu_co8190652.1_g000001 Rmu_co8273449.1_g000001 Rmu_co8310417.1_g000001 Rmu_sc0002160.1_g000028 Rmu_sc0002160.1_g000031 Rmu_sc0002962.1_g000022 Rmu_sc0004623.1_g000006 Rmu_sc0004623.1_g000007 Rmu_sc0013826.1_g000002 Rmu_sc0013826.1_g000003 Rmu_sc0020974.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105360 Rroxscaffold_4G00314970 Rroxscaffold_6G00413200
rosa_rugosa	Rorug01G0131100 Rorug01G0423200 Rorug01G0424100
rosa_samantha	Rh1AG151800 Rh1AG152100 Rh1AG447500 Rh1AG447600 Rh1AG448600 Rh1AG449500 Rh1AG449700 Rh1BG119600 Rh1BG404200 Rh1BG405400 Rh1CG143000 Rh1CG418300 Rh1DG159000 Rh1DG159300 Rh1DG159400 Rh1DG434600 Rh1DG435500 Rh1DG435900
rosa_wichuraiana	Rw0G005920 Rw0G005960 Rw0G005970 Rw1G012410 Rw1G012420 Rw1G038950 Rw1G039110 Rw1G039170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	644
Acc36I	ACCTGC	3 cut(s)	326, 397, 644
Acc65I	GGTACC	1 cut(s)	1298
AccB1I	GGYRCC	3 cut(s)	1036, 1133, 1298
AccB7I	CCANNNNNTGG	1 cut(s)	1409
AccI	GTMKAC	1 cut(s)	1284
AccII	CGCG	2 cut(s)	54, 1269
AccIII	TCCGGA	1 cut(s)	730
AclI	AACGTT	1 cut(s)	939
AclWI	GGATC	7 cut(s)	34, 39, 869, 1043, 1056, 1153, 1422
AcoI	YGGCCR	1 cut(s)	115
AcsI	RAATTY	1 cut(s)	726
AcuI	CTGAAG	1 cut(s)	88
AfaI	GTAC	4 cut(s)	317, 1013, 1108, 1300
AfeI	AGCGCT	1 cut(s)	363
AfiI	CCNNNNNNNGG	7 cut(s)	256, 821, 1103, 1169, 1270, 1309, 1409
AflIII	ACRYGT	1 cut(s)	52
AgsI	TTSAA	5 cut(s)	202, 235, 349, 671, 1327
AjnI	CCWGG	4 cut(s)	117, 783, 1102, 1162
AluBI	AGCT	5 cut(s)	128, 183, 410, 812, 1141
AluI	AGCT	5 cut(s)	128, 183, 410, 812, 1141
Alw21I	GWGCWC	1 cut(s)	9
Alw26I	GTCTC	3 cut(s)	956, 965, 1153
AlwI	GGATC	7 cut(s)	34, 39, 869, 1043, 1056, 1153, 1422
AlwNI	CAGNNNCTG	1 cut(s)	413
Ama87I	CYCGRG	1 cut(s)	1150
Aor13HI	TCCGGA	1 cut(s)	730
Aor51HI	AGCGCT	1 cut(s)	363
AoxI	GGCC	5 cut(s)	115, 781, 824, 924, 1100
ApeKI	GCWGC	9 cut(s)	17, 67, 99, 128, 410, 413, 416, 419, 711
ApoI	RAATTY	1 cut(s)	726
ArsI	GACNNNNNNTTYG	2 cut(s)	575, 607
Asp700I	GAANNNNTTC	1 cut(s)	477
Asp718I	GGTACC	1 cut(s)	1298
AspA2I	CCTAGG	1 cut(s)	1097
AspLEI	GCGC	4 cut(s)	288, 364, 650, 749
AspS9I	GGNCC	2 cut(s)	824, 925
AsuC2I	CCSGG	1 cut(s)	855
AsuHPI	GGTGA	5 cut(s)	455, 625, 786, 1103, 1386
AvaI	CYCGRG	1 cut(s)	1150
AvrII	CCTAGG	1 cut(s)	1097
BaeGI	GKGCMC	1 cut(s)	1136
BamHI	GGATCC	1 cut(s)	1048
BanI	GGYRCC	3 cut(s)	1036, 1133, 1298
Bbv12I	GWGCWC	1 cut(s)	9
BbvI	GCAGC	9 cut(s)	29, 54, 86, 115, 397, 400, 403, 406, 723
BccI	CCATC	5 cut(s)	70, 938, 1026, 1238, 1370
BceAI	ACGGC	2 cut(s)	27, 130
BciT130I	CCWGG	4 cut(s)	119, 785, 1104, 1164
BclI	TGATCA	1 cut(s)	109
BcnI	CCSGG	1 cut(s)	855
BcoDI	GTCTC	3 cut(s)	956, 965, 1153
BfaI	CTAG	2 cut(s)	1098, 1432
BfoI	RGCGCY	2 cut(s)	289, 365
BfuAI	ACCTGC	3 cut(s)	326, 397, 644
BlnI	CCTAGG	1 cut(s)	1097
Bme1390I	CCNGG	5 cut(s)	119, 785, 855, 1104, 1164
BmeT110I	CYCGRG	1 cut(s)	1150
BmgT120I	GGNCC	2 cut(s)	824, 925
BmiI	GGNNCC	5 cut(s)	1038, 1050, 1135, 1174, 1300
BmrFI	CCNGG	5 cut(s)	119, 785, 855, 1104, 1164
BmsI	GCATC	3 cut(s)	70, 213, 322
BoxI	GACNNNNGTC	1 cut(s)	1226
BpmI	CTGGAG	1 cut(s)	780
BpuEI	CTTGAG	3 cut(s)	388, 557, 792
BpuMI	CCSGG	1 cut(s)	855
Bsa29I	ATCGAT	1 cut(s)	1417
BsaI	GGTCTC	1 cut(s)	1153
BsaJI	CCNNGG	3 cut(s)	699, 1097, 1162
BsaWI	WCCGGW	2 cut(s)	730, 919
BsaXI	ACNNNNNCTCC	4 cut(s)	518, 548, 796, 826
Bsc4I	CCNNNNNNNGG	7 cut(s)	256, 821, 1103, 1169, 1270, 1309, 1409
Bse118I	RCCGGY	2 cut(s)	272, 776
Bse1I	ACTGG	2 cut(s)	160, 887
Bse3DI	GCAATG	1 cut(s)	643
BseAI	TCCGGA	1 cut(s)	730
BseBI	CCWGG	4 cut(s)	119, 785, 1104, 1164
BseCI	ATCGAT	1 cut(s)	1417
BseDI	CCNNGG	3 cut(s)	699, 1097, 1162
BseGI	GGATG	4 cut(s)	85, 228, 994, 1378
BseLI	CCNNNNNNNGG	7 cut(s)	256, 821, 1103, 1169, 1270, 1309, 1409
BseMI	GCAATG	1 cut(s)	643
BseMII	CTCAG	1 cut(s)	180
BseNI	ACTGG	2 cut(s)	160, 887
BseSI	GKGCMC	1 cut(s)	1136
BseXI	GCAGC	9 cut(s)	29, 54, 86, 115, 397, 400, 403, 406, 723
BseYI	CCCAGC	2 cut(s)	183, 288
Bsh1236I	CGCG	2 cut(s)	54, 1269
BshFI	GGCC	5 cut(s)	117, 783, 826, 926, 1102
BshNI	GGYRCC	3 cut(s)	1036, 1133, 1298
BshVI	ATCGAT	1 cut(s)	1417
BsiHKAI	GWGCWC	1 cut(s)	9
BsiHKCI	CYCGRG	1 cut(s)	1150
BsiSI	CCGG	6 cut(s)	273, 731, 777, 854, 920, 1046
BslI	CCNNNNNNNGG	7 cut(s)	256, 821, 1103, 1169, 1270, 1309, 1409
BsmAI	GTCTC	3 cut(s)	956, 965, 1153
BsnI	GGCC	5 cut(s)	117, 783, 826, 926, 1102
Bso31I	GGTCTC	1 cut(s)	1153
BsoBI	CYCGRG	1 cut(s)	1150
Bsp1286I	GDGCHC	2 cut(s)	9, 1136
Bsp13I	TCCGGA	1 cut(s)	730
Bsp1407I	TGTACA	1 cut(s)	1011
Bsp143I	GATC	9 cut(s)	39, 44, 109, 195, 799, 874, 1048, 1158, 1414
BspANI	GGCC	5 cut(s)	117, 783, 826, 926, 1102
BspCNI	CTCAG	1 cut(s)	181
BspDI	ATCGAT	1 cut(s)	1417
BspEI	TCCGGA	1 cut(s)	730
BspFNI	CGCG	2 cut(s)	54, 1269
BspHI	TCATGA	1 cut(s)	1426
BspLI	GGNNCC	5 cut(s)	1038, 1050, 1135, 1174, 1300
BspMI	ACCTGC	3 cut(s)	326, 397, 644
BspPI	GGATC	7 cut(s)	34, 39, 869, 1043, 1056, 1153, 1422
BspT107I	GGYRCC	3 cut(s)	1036, 1133, 1298
BspTNI	GGTCTC	1 cut(s)	1153
BsrDI	GCAATG	1 cut(s)	643
BsrFI	RCCGGY	2 cut(s)	272, 776
BsrGI	TGTACA	1 cut(s)	1011
BsrI	ACTGG	2 cut(s)	160, 887
BssAI	RCCGGY	2 cut(s)	272, 776
BssECI	CCNNGG	3 cut(s)	699, 1097, 1162
BssMI	GATC	9 cut(s)	39, 44, 109, 195, 799, 874, 1048, 1158, 1414
BssT1I	CCWWGG	1 cut(s)	1097
Bst2UI	CCWGG	4 cut(s)	119, 785, 1104, 1164
Bst4CI	ACNGT	3 cut(s)	136, 551, 1091
BstAUI	TGTACA	1 cut(s)	1011
BstC8I	GCNNGC	5 cut(s)	65, 408, 684, 778, 1351
BstDEI	CTNAG	1 cut(s)	189
BstDSI	CCRYGG	1 cut(s)	699
BstEII	GGTNACC	1 cut(s)	1091
BstENI	CCTNNNNNAGG	1 cut(s)	1167
BstF5I	GGATG	4 cut(s)	85, 228, 994, 1378
BstFNI	CGCG	2 cut(s)	54, 1269
BstH2I	RGCGCY	2 cut(s)	289, 365
BstHHI	GCGC	4 cut(s)	288, 364, 650, 749
BstKTI	GATC	9 cut(s)	42, 47, 112, 198, 802, 877, 1051, 1161, 1417
BstMAI	GTCTC	3 cut(s)	956, 965, 1153
BstMBI	GATC	9 cut(s)	39, 44, 109, 195, 799, 874, 1048, 1158, 1414
BstMWI	GCNNNNNNNGC	8 cut(s)	60, 359, 416, 419, 645, 654, 688, 1346
BstNI	CCWGG	4 cut(s)	119, 785, 1104, 1164
BstPAI	GACNNNNGTC	1 cut(s)	1226
BstPI	GGTNACC	1 cut(s)	1091
BstSCI	CCNGG	5 cut(s)	117, 783, 853, 1102, 1162
BstSLI	GKGCMC	1 cut(s)	1136
BstUI	CGCG	2 cut(s)	54, 1269
BstV1I	GCAGC	9 cut(s)	29, 54, 86, 115, 397, 400, 403, 406, 723
BstX2I	RGATCY	3 cut(s)	39, 1048, 1158
BstXI	CCANNNNNNTGG	1 cut(s)	1144
BstYI	RGATCY	3 cut(s)	39, 1048, 1158
Bsu15I	ATCGAT	1 cut(s)	1417
BsuRI	GGCC	5 cut(s)	117, 783, 826, 926, 1102
BsuTUI	ATCGAT	1 cut(s)	1417
BtgI	CCRYGG	1 cut(s)	699
BtsCI	GGATG	4 cut(s)	85, 228, 994, 1378
BtsIMutI	CAGTG	3 cut(s)	112, 132, 1073
BveI	ACCTGC	3 cut(s)	326, 397, 644
Cac8I	GCNNGC	5 cut(s)	65, 408, 684, 778, 1351
CaiI	CAGNNNCTG	1 cut(s)	413
CciI	TCATGA	1 cut(s)	1426
CfoI	GCGC	4 cut(s)	288, 364, 650, 749
Cfr10I	RCCGGY	2 cut(s)	272, 776
Cfr13I	GGNCC	2 cut(s)	824, 925
ClaI	ATCGAT	1 cut(s)	1417
CseI	GACGC	2 cut(s)	43, 1275
Csp6I	GTAC	4 cut(s)	316, 1012, 1107, 1299
CviAII	CATG	7 cut(s)	594, 721, 769, 1129, 1304, 1315, 1427
CviQI	GTAC	4 cut(s)	316, 1012, 1107, 1299
DdeI	CTNAG	1 cut(s)	189
DpnI	GATC	9 cut(s)	41, 46, 111, 197, 801, 876, 1050, 1160, 1416
DpnII	GATC	9 cut(s)	39, 44, 109, 195, 799, 874, 1048, 1158, 1414
EaeI	YGGCCR	1 cut(s)	115
Eco130I	CCWWGG	1 cut(s)	1097
Eco147I	AGGCCT	1 cut(s)	1102
Eco31I	GGTCTC	1 cut(s)	1153
Eco47III	AGCGCT	1 cut(s)	363
Eco57I	CTGAAG	1 cut(s)	88
Eco88I	CYCGRG	1 cut(s)	1150
Eco91I	GGTNACC	1 cut(s)	1091
EcoNI	CCTNNNNNAGG	1 cut(s)	1167
EcoO109I	RGGNCCY	1 cut(s)	925
EcoO65I	GGTNACC	1 cut(s)	1091
EcoRII	CCWGG	4 cut(s)	117, 783, 1102, 1162
EcoT14I	CCWWGG	1 cut(s)	1097
ErhI	CCWWGG	1 cut(s)	1097
FaeI	CATG	7 cut(s)	597, 724, 772, 1132, 1307, 1318, 1430
FalI	AAGNNNNNCTT	2 cut(s)	880, 912
FatI	CATG	7 cut(s)	593, 720, 768, 1128, 1303, 1314, 1426
FauI	CCCGC	3 cut(s)	675, 905, 1262
FbaI	TGATCA	1 cut(s)	109
FblI	GTMKAC	1 cut(s)	1284
FokI	GGATG	4 cut(s)	92, 235, 981, 1385
FspBI	CTAG	2 cut(s)	1098, 1432
GlaI	GCGC	4 cut(s)	287, 363, 649, 748
GsaI	CCCAGC	2 cut(s)	187, 292
GsuI	CTGGAG	1 cut(s)	780
HaeII	RGCGCY	2 cut(s)	289, 365
HaeIII	GGCC	5 cut(s)	117, 783, 826, 926, 1102
HapII	CCGG	6 cut(s)	273, 731, 777, 854, 920, 1046
HgaI	GACGC	2 cut(s)	43, 1275
HhaI	GCGC	4 cut(s)	288, 364, 650, 749
Hin1II	CATG	7 cut(s)	597, 724, 772, 1132, 1307, 1318, 1430
Hin6I	GCGC	4 cut(s)	286, 362, 648, 747
HinP1I	GCGC	4 cut(s)	286, 362, 648, 747
HincII	GTYRAC	2 cut(s)	937, 1285
HindII	GTYRAC	2 cut(s)	937, 1285
HindIII	AAGCTT	1 cut(s)	1139
HinfI	GANTC	7 cut(s)	266, 446, 478, 765, 791, 829, 1419
HpaI	GTTAAC	1 cut(s)	937
HpaII	CCGG	6 cut(s)	273, 731, 777, 854, 920, 1046
HphI	GGTGA	5 cut(s)	455, 625, 786, 1103, 1386
Hpy166II	GTNNAC	6 cut(s)	937, 971, 1012, 1109, 1221, 1285
Hpy188I	TCNGA	8 cut(s)	34, 44, 180, 240, 451, 465, 901, 1265
Hpy188III	TCNNGA	8 cut(s)	199, 367, 437, 731, 759, 878, 1150, 1427
Hpy8I	GTNNAC	6 cut(s)	937, 971, 1012, 1109, 1221, 1285
Hpy99I	CGWCG	3 cut(s)	59, 491, 1269
HpyAV	CCTTC	4 cut(s)	434, 906, 1270, 1289
HpyCH4III	ACNGT	3 cut(s)	136, 551, 1091
HpyCH4IV	ACGT	4 cut(s)	558, 660, 939, 1203
HpyCH4V	TGCA	7 cut(s)	142, 335, 498, 603, 657, 676, 1124
HpyF10VI	GCNNNNNNNGC	8 cut(s)	60, 359, 416, 419, 645, 654, 688, 1346
HpyF3I	CTNAG	1 cut(s)	189
HpySE526I	ACGT	4 cut(s)	558, 660, 939, 1203
Hsp92II	CATG	7 cut(s)	597, 724, 772, 1132, 1307, 1318, 1430
HspAI	GCGC	4 cut(s)	286, 362, 648, 747
Kpn2I	TCCGGA	1 cut(s)	730
KpnI	GGTACC	1 cut(s)	1302
KroI	GCCGGC	1 cut(s)	776
KroNI	GCCGGC	1 cut(s)	778
Ksp22I	TGATCA	1 cut(s)	109
KspAI	GTTAAC	1 cut(s)	937
Kzo9I	GATC	9 cut(s)	39, 44, 109, 195, 799, 874, 1048, 1158, 1414
LmnI	GCTCC	5 cut(s)	4, 180, 733, 817, 1178
Lsp1109I	GCAGC	9 cut(s)	29, 54, 86, 115, 397, 400, 403, 406, 723
LweI	GCATC	3 cut(s)	70, 213, 322
MaeI	CTAG	2 cut(s)	1098, 1432
MaeII	ACGT	4 cut(s)	558, 660, 939, 1203
MaeIII	GTNAC	4 cut(s)	215, 554, 1091, 1228
MalI	GATC	9 cut(s)	41, 46, 111, 197, 801, 876, 1050, 1160, 1416
MboI	GATC	9 cut(s)	39, 44, 109, 195, 799, 874, 1048, 1158, 1414
MflI	RGATCY	3 cut(s)	39, 1048, 1158
MhlI	GDGCHC	2 cut(s)	9, 1136
MluCI	AATT	9 cut(s)	22, 344, 466, 530, 671, 726, 1021, 1078, 1330
MluI	ACGCGT	1 cut(s)	52
MlyI	GAGTC	2 cut(s)	455, 838
MmeI	TCCRAC	3 cut(s)	51, 891, 1288
MreI	CGCCGGCG	1 cut(s)	776
MroI	TCCGGA	1 cut(s)	730
MroNI	GCCGGC	1 cut(s)	776
MroXI	GAANNNNTTC	1 cut(s)	477
MseI	TTAA	5 cut(s)	327, 849, 936, 1365, 1386
MspA1I	CMGCKG	1 cut(s)	410
MspI	CCGG	6 cut(s)	273, 731, 777, 854, 920, 1046
MspR9I	CCNGG	5 cut(s)	119, 785, 855, 1104, 1164
MvaI	CCWGG	4 cut(s)	119, 785, 1104, 1164
MvnI	CGCG	2 cut(s)	54, 1269
MwoI	GCNNNNNNNGC	8 cut(s)	60, 359, 416, 419, 645, 654, 688, 1346
NaeI	GCCGGC	1 cut(s)	778
NciI	CCSGG	1 cut(s)	855
NdeII	GATC	9 cut(s)	39, 44, 109, 195, 799, 874, 1048, 1158, 1414
NgoMIV	GCCGGC	1 cut(s)	776
NlaIII	CATG	7 cut(s)	597, 724, 772, 1132, 1307, 1318, 1430
NlaIV	GGNNCC	5 cut(s)	1038, 1050, 1135, 1174, 1300
NmeAIII	GCCGAG	1 cut(s)	852
NmuCI	GTSAC	3 cut(s)	215, 1091, 1228
PaeR7I	CTCGAG	1 cut(s)	1150
PagI	TCATGA	1 cut(s)	1426
PaqCI	CACCTGC	1 cut(s)	644
PceI	AGGCCT	1 cut(s)	1102
PcsI	WCGNNNNNNNCGW	2 cut(s)	555, 876
PdiI	GCCGGC	1 cut(s)	778
PdmI	GAANNNNTTC	1 cut(s)	477
PfeI	GAWTC	5 cut(s)	266, 478, 765, 791, 1419
PflMI	CCANNNNNTGG	1 cut(s)	1409
PleI	GAGTC	2 cut(s)	454, 837
PpsI	GAGTC	2 cut(s)	454, 837
PshAI	GACNNNNGTC	1 cut(s)	1226
Psp1406I	AACGTT	1 cut(s)	939
Psp6I	CCWGG	4 cut(s)	117, 783, 1102, 1162
PspEI	GGTNACC	1 cut(s)	1091
PspFI	CCCAGC	2 cut(s)	183, 288
PspGI	CCWGG	4 cut(s)	117, 783, 1102, 1162
PspN4I	GGNNCC	5 cut(s)	1038, 1050, 1135, 1174, 1300
PspPI	GGNCC	2 cut(s)	824, 925
PstNI	CAGNNNCTG	1 cut(s)	413
PsuI	RGATCY	3 cut(s)	39, 1048, 1158
PvuII	CAGCTG	1 cut(s)	410
RsaI	GTAC	4 cut(s)	317, 1013, 1108, 1300
RsaNI	GTAC	4 cut(s)	316, 1012, 1107, 1299
SalI	GTCGAC	1 cut(s)	1283
SaqAI	TTAA	5 cut(s)	327, 849, 936, 1365, 1386
Sau3AI	GATC	9 cut(s)	39, 44, 109, 195, 799, 874, 1048, 1158, 1414
Sau96I	GGNCC	2 cut(s)	824, 925
SchI	GAGTC	2 cut(s)	455, 838
ScrFI	CCNGG	5 cut(s)	119, 785, 855, 1104, 1164
SduI	GDGCHC	2 cut(s)	9, 1136
SfaNI	GCATC	3 cut(s)	70, 213, 322
Sfr274I	CTCGAG	1 cut(s)	1150
SgrAI	CRCCGGYG	1 cut(s)	776
SlaI	CTCGAG	1 cut(s)	1150
SmlI	CTYRAG	4 cut(s)	367, 572, 807, 1150
SmoI	CTYRAG	4 cut(s)	367, 572, 807, 1150
Sse9I	AATT	9 cut(s)	22, 344, 466, 530, 671, 726, 1021, 1078, 1330
SseBI	AGGCCT	1 cut(s)	1102
SspMI	CTAG	2 cut(s)	1098, 1432
StuI	AGGCCT	1 cut(s)	1102
StyD4I	CCNGG	5 cut(s)	117, 783, 853, 1102, 1162
StyI	CCWWGG	1 cut(s)	1097
TaaI	ACNGT	3 cut(s)	136, 551, 1091
TaiI	ACGT	4 cut(s)	561, 663, 942, 1206
TaqI	TCGA	7 cut(s)	57, 581, 832, 1151, 1242, 1284, 1417
TasI	AATT	9 cut(s)	22, 344, 466, 530, 671, 726, 1021, 1078, 1330
TatI	WGTACW	1 cut(s)	1011
TauI	GCSGC	3 cut(s)	17, 642, 783
TfiI	GAWTC	5 cut(s)	266, 478, 765, 791, 1419
Tru1I	TTAA	5 cut(s)	327, 849, 936, 1365, 1386
Tru9I	TTAA	5 cut(s)	327, 849, 936, 1365, 1386
TscAI	CASTG	3 cut(s)	112, 139, 1080
TseFI	GTSAC	3 cut(s)	215, 1091, 1228
TseI	GCWGC	9 cut(s)	17, 67, 99, 128, 410, 413, 416, 419, 711
Tsp45I	GTSAC	3 cut(s)	215, 1091, 1228
TspDTI	ATGAA	5 cut(s)	414, 627, 737, 920, 983
TspGWI	ACGGA	1 cut(s)	716
TspRI	CASTG	3 cut(s)	112, 139, 1080
Van91I	CCANNNNNTGG	1 cut(s)	1409
XagI	CCTNNNNNAGG	1 cut(s)	1167
XapI	RAATTY	1 cut(s)	726
XhoI	CTCGAG	1 cut(s)	1150
XmaJI	CCTAGG	1 cut(s)	1097
XmiI	GTMKAC	1 cut(s)	1284
XmnI	GAANNNNTTC	1 cut(s)	477
XspI	CTAG	2 cut(s)	1098, 1432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.