Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00234

Orthogroup ID

OG0000753

Physical Location & Seq

Genomic Coordinates Reverse (-)

174583 .. 180767

Gene Structure 6185 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G005970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGCTGAAACTGTTTTGCATGCAATTTGGCTATGCCGTTCTTCAAAGGAGTAGAAATTTGTATACTTTGCCTGCTGTTCGGATGACTTGGAGGAGACCTAGATTTCCTTTTATCAAGATTAATGTAGATGGGGCTGTTCACTTGAATGCAGCTACCGAATATGCTGCCATATTGGGTCTTCAAGTGGCAAGAAATGGAGGCTACTCACATGCTGTTCTTGAAATGGATGCAAAGGAAGCAGTGACATGTATATCCTCTGCCGATGAAAACTGGGATGTGGATGGGGCTCTTGTGGAGGCAGTAAAGATGGTATATATCCATGATAACACATTCCTAGTTTTCTCAAAATTTAAAGAGTTTTACTTTGCTATGGATGATTTAATGGAGATGAGCGAGGCGAAGTTTCTCTATCTATGTATGGAGGAATTATGTGCGGAAAGAGATGGTTGTTACGTTATCCGCACCCTCAAGTTGTCGAGCTTATTGTCATGCTCTTGCAAGTTTGATGAAAAGATAGGAAAAATAATCACCTGCAACCATTGCACCTCAAGCAACGTGCCATTTGAATTGCAAAAGCGGGCTTGGCTAAGCACCAACGACTTCGGCAACAAGAAAATGAAAATTCCGATGTATATGGGTTGCGCTTCTTATTCCGGCGGAATCATGTTCGCCGGCGGCATGGACCAGTCACCAGATCAAACTCGAGCTCCTTACTCTGTGCAAAGTCGAAAGTGTTATTTGTTTAATCCGAGTCAAAAGCGTCGTAACAATCATTCCGAGTGGATAAGATTTCGTGAGGACCTCAAAAGCGGGAAACCGGAGGCCCTGCTGGTTAACGTTGATGGAAGTCTTTATTGTCTCTCTGGTTTAGTCATTGGTCAGGATGTCGTTCATCCTACCTTTGAGGTGTACAGTCGCCATTCAGGGATATGGGTGCCTCTGCCGGATCCTCCTTTTTACACACCCGAAGCACTGAACTACAAACGCGGTGACCCTAGGGCTGGTACACACTTGTCTTATGCAATCATGGGCACCAAGATTTTGGTCTCGAGCAAGATACCTGGTACAGGTTCCTGCCTTCACTTTCCCGTTTGTTGCTTTGACGTTAAGGAAAAAATGTGGACAGAGGTCACTACCTTGTTCAATGGTAAGCCATTTCCCTTCCGACGCGGGGCTTTAGTGGTCGACTTGGAGGACGGTACCCATGATAAGGTCATGTTTTACTTCAATAATTATTTTGCTATAAGAGCCTGCCGATTAGTAGTTAATGAGGATGATGGAAGTATTAAGAACTCACCCCCCCAATCTTTGGGGATCGATTCCCTCATGACTAGCTTATTGGAAATAACCATTCGAAATCAGTCAATGGTAAGAATGTCGTGGGATTTTGTTGATCTAGGAAATAAAAAAGTCTGTTTTGTTTTGTCCTCGAGCCTCCCAAAAGTTAGAGACGACTATAGCGCCACTCATCGCCAGACGATTCGTCTTCTTGTCTTGGTAATTCAATTTCAAGTTTTGGAGTCAGGAGATTTCTCCTTCAAGTTCCTGGCTACTCGCACCTTTGAATACCAAGGAAACGTTACTCTTAATAAGGTGAAACGTGGTCATCTGGTGGAATTGAAGTTGTGGAACACAGTGTTATGTGATTCTAGGAAATACCCTTTGAAAGAACCGTTCTCAAAACTGGTTGATAGTGCAAATACTTCCAACACCATTCAAACAGCCAACATCAGAAGAAATCCAGGAAACCAATATGAAAACAGTGACTCGATTGAACATATTGGATCCATTGTCATACAAGGAACAAATGGTGTATTGCAATGCTTCAATTTCCAGATTTGCAACACACGACGAGTCTACGTGACTATCACAGATGGTCAAAATGAGGCAACGGTTATCATAATGGGAAAACAAGCAGAGCAACTGTTTGGAAGTAATTGCAAAGATTTGGTCAGCAAAAGATCCTACCCAACAGAAGCAACATTACCAGAGGAGATGGAGAAAACAAGAGGCCAAAATGAGAGAGAAGCAGAGGAAGATGAAACCACATCGTCATCAGCTGAAAACAAAAAGACTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00020 ko00190 ko01100 ko01110 ko01120 ko01130 ko01200 ko03015 ko03040 ko04714 ko04932 ko05010 ko05012 ko05016 map00020 map00190 map01100 map01110 map01120 map01130 map01200 map03015 map03040 map04714 map04932 map05010 map05012 map05016

Pfam Domains

Protein Families

RRM_1

Protein Analysis

693

Amino Acids

78.48

Weight (kDa)

8.1

Isoelectric Point (pI)

44.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1668	PF07893	269 - 396	1.4e-07	Protein of unknown function (DUF1668)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000753)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g26720 FvH4_7g27001 FvH4_7g27001 FvH4_7g27001 FvH4_7g31210 FvH4_7g31211 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31260 FvH4_7g31310 FvH4_7g31320 FvH4_7g31670 FvH4_7g31670 FvH4_7g31681 FvH4_7g31682
rosa_chinensis	RchiOBHm_Chr1g0337091 RchiOBHm_Chr1g0337131 RchiOBHm_Chr1g0380941
rosa_laevigata	RLG00000026258 RLG00000026260 RLG00000026268 RLG00000026269 RLG00000029305
rosa_multiflora	Rmu_co8190652.1_g000001 Rmu_co8273449.1_g000001 Rmu_co8310417.1_g000001 Rmu_sc0002160.1_g000028 Rmu_sc0002160.1_g000031 Rmu_sc0002962.1_g000022 Rmu_sc0004623.1_g000006 Rmu_sc0004623.1_g000007 Rmu_sc0013826.1_g000002 Rmu_sc0013826.1_g000003 Rmu_sc0020974.1_g000001
rosa_roxburghii	Rroxscaffold_2G00105360 Rroxscaffold_4G00314970 Rroxscaffold_6G00413200
rosa_rugosa	Rorug01G0131100 Rorug01G0423200 Rorug01G0424100
rosa_samantha	Rh1AG151800 Rh1AG152100 Rh1AG447500 Rh1AG447600 Rh1AG448600 Rh1AG449500 Rh1AG449700 Rh1BG119600 Rh1BG404200 Rh1BG405400 Rh1CG143000 Rh1CG418300 Rh1DG159000 Rh1DG159300 Rh1DG159400 Rh1DG434600 Rh1DG435500 Rh1DG435900
rosa_wichuraiana	Rw0G005920 Rw0G005960 Rw0G005970 Rw1G012410 Rw1G012420 Rw1G038950 Rw1G039110 Rw1G039170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	539
Acc36I	ACCTGC	1 cut(s)	539
Acc65I	GGTACC	1 cut(s)	1199
AccB1I	GGYRCC	3 cut(s)	934, 1031, 1199
AccB7I	CCANNNNNTGG	1 cut(s)	1309
AccI	GTMKAC	3 cut(s)	62, 1185, 1857
AccII	CGCG	2 cut(s)	987, 1170
AciI	CCGC	8 cut(s)	434, 460, 577, 657, 675, 810, 987, 1170
AclI	AACGTT	2 cut(s)	837, 1578
AclWI	GGATC	6 cut(s)	941, 954, 1322, 1779, 1792, 1956
AcsI	RAATTY	3 cut(s)	55, 347, 621
AfaI	GTAC	4 cut(s)	911, 1006, 1066, 1201
AfiI	CCNNNNNNNGG	5 cut(s)	1001, 1067, 1171, 1210, 1309
AflIII	ACRYGT	1 cut(s)	245
AhdI	GACNNNNNGTC	1 cut(s)	1482
AjnI	CCWGG	3 cut(s)	1060, 1545, 1741
AluBI	AGCT	5 cut(s)	152, 480, 707, 1335, 2060
AluI	AGCT	5 cut(s)	152, 480, 707, 1335, 2060
Alw21I	GWGCWC	1 cut(s)	709
Alw26I	GTCTC	4 cut(s)	88, 863, 1051, 1443
AlwI	GGATC	6 cut(s)	941, 954, 1322, 1779, 1792, 1956
Ama87I	CYCGRG	3 cut(s)	702, 1048, 1429
AoxI	GGCC	2 cut(s)	822, 2011
ApeKI	GCWGC	2 cut(s)	149, 164
ApoI	RAATTY	3 cut(s)	55, 347, 621
ArsI	GACNNNNNNTTYG	2 cut(s)	1935, 1967
AseI	ATTAAT	1 cut(s)	120
Asp718I	GGTACC	1 cut(s)	1199
AspA2I	CCTAGG	1 cut(s)	995
AspLEI	GCGC	2 cut(s)	644, 1463
AspS9I	GGNCC	3 cut(s)	682, 799, 823
AsuHPI	GGTGA	5 cut(s)	520, 681, 1001, 1287, 1606
AsuII	TTCGAA	1 cut(s)	1354
AvaI	CYCGRG	3 cut(s)	702, 1048, 1429
AvaII	GGWCC	2 cut(s)	682, 799
AvrII	CCTAGG	1 cut(s)	995
BaeGI	GKGCMC	1 cut(s)	1034
BamHI	GGATCC	2 cut(s)	946, 1784
BanI	GGYRCC	3 cut(s)	934, 1031, 1199
BanII	GRGCYC	2 cut(s)	289, 709
BarI	GAAGNNNNNNTAC	2 cut(s)	1968, 2000
BbsI	GAAGAC	2 cut(s)	170, 1478
Bbv12I	GWGCWC	1 cut(s)	709
BbvI	GCAGC	2 cut(s)	151, 161
BccI	CCATC	8 cut(s)	122, 275, 301, 437, 836, 1271, 1868, 1990
BceAI	ACGGC	1 cut(s)	20
BcgI	CGANNNNNNTGC	2 cut(s)	146, 180
BciT130I	CCWGG	3 cut(s)	1062, 1547, 1743
BcoDI	GTCTC	4 cut(s)	88, 863, 1051, 1443
BfaI	CTAG	6 cut(s)	99, 335, 996, 1332, 1397, 1650
BfmI	CTRYAG	1 cut(s)	1456
BfoI	RGCGCY	1 cut(s)	1464
BfuAI	ACCTGC	1 cut(s)	539
BisI	GCNGC	3 cut(s)	150, 165, 676
BlnI	CCTAGG	1 cut(s)	995
BlpI	GCTNAGC	1 cut(s)	587
BlsI	GCNGC	3 cut(s)	151, 166, 677
Bme1390I	CCNGG	3 cut(s)	1062, 1547, 1743
Bme18I	GGWCC	2 cut(s)	682, 799
BmeRI	GACNNNNNGTC	1 cut(s)	1482
BmeT110I	CYCGRG	3 cut(s)	702, 1048, 1429
BmgT120I	GGNCC	3 cut(s)	682, 799, 823
BmiI	GGNNCC	6 cut(s)	936, 948, 1033, 1072, 1201, 1786
BmrFI	CCNGG	3 cut(s)	1062, 1547, 1743
BmrI	ACTGGG	1 cut(s)	280
BmsI	GCATC	1 cut(s)	217
BmuI	ACTGGG	1 cut(s)	280
BoxI	GACNNNNGTC	1 cut(s)	1127
BpiI	GAAGAC	2 cut(s)	170, 1478
Bpu1102I	GCTNAGC	1 cut(s)	587
Bpu14I	TTCGAA	1 cut(s)	1354
BpuEI	CTTGAG	2 cut(s)	452, 532
Bsa29I	ATCGAT	1 cut(s)	1317
BsaAI	YACGTR	1 cut(s)	1861
BsaI	GGTCTC	2 cut(s)	88, 1051
BsaJI	CCNNGG	2 cut(s)	995, 1570
BsaWI	WCCGGW	1 cut(s)	817
BsaXI	ACNNNNNCTCC	2 cut(s)	691, 721
Bsc4I	CCNNNNNNNGG	5 cut(s)	1001, 1067, 1171, 1210, 1309
Bse118I	RCCGGY	1 cut(s)	671
Bse1I	ACTGG	3 cut(s)	275, 685, 1689
Bse3DI	GCAATG	2 cut(s)	538, 1826
BseBI	CCWGG	3 cut(s)	1062, 1547, 1743
BseCI	ATCGAT	1 cut(s)	1317
BseDI	CCNNGG	2 cut(s)	995, 1570
BseGI	GGATG	8 cut(s)	87, 232, 280, 286, 379, 889, 892, 1279
BseLI	CCNNNNNNNGG	5 cut(s)	1001, 1067, 1171, 1210, 1309
BseMI	GCAATG	2 cut(s)	538, 1826
BseNI	ACTGG	3 cut(s)	275, 685, 1689
BseRI	GAGGAG	2 cut(s)	106, 2006
BseSI	GKGCMC	1 cut(s)	1034
BseXI	GCAGC	2 cut(s)	151, 161
Bsh1236I	CGCG	2 cut(s)	987, 1170
BshFI	GGCC	2 cut(s)	824, 2013
BshNI	GGYRCC	3 cut(s)	934, 1031, 1199
BshVI	ATCGAT	1 cut(s)	1317
BsiHKAI	GWGCWC	1 cut(s)	709
BsiHKCI	CYCGRG	3 cut(s)	702, 1048, 1429
BsiSI	CCGG	4 cut(s)	654, 672, 818, 944
BslI	CCNNNNNNNGG	5 cut(s)	1001, 1067, 1171, 1210, 1309
BsmAI	GTCTC	4 cut(s)	88, 863, 1051, 1443
BsmBI	CGTCTC	1 cut(s)	1443
BsmI	GAATGC	1 cut(s)	151
BsnI	GGCC	2 cut(s)	824, 2013
Bso31I	GGTCTC	2 cut(s)	88, 1051
BsoBI	CYCGRG	3 cut(s)	702, 1048, 1429
Bsp119I	TTCGAA	1 cut(s)	1354
Bsp1286I	GDGCHC	3 cut(s)	289, 709, 1034
Bsp1407I	TGTACA	1 cut(s)	909
Bsp143I	GATC	6 cut(s)	694, 946, 1314, 1393, 1784, 1961
Bsp1720I	GCTNAGC	1 cut(s)	587
BspACI	CCGC	8 cut(s)	434, 460, 577, 657, 675, 810, 987, 1170
BspANI	GGCC	2 cut(s)	824, 2013
BspDI	ATCGAT	1 cut(s)	1317
BspFNI	CGCG	2 cut(s)	987, 1170
BspHI	TCATGA	1 cut(s)	1326
BspLI	GGNNCC	6 cut(s)	936, 948, 1033, 1072, 1201, 1786
BspMI	ACCTGC	1 cut(s)	539
BspPI	GGATC	6 cut(s)	941, 954, 1322, 1779, 1792, 1956
BspT104I	TTCGAA	1 cut(s)	1354
BspT107I	GGYRCC	3 cut(s)	934, 1031, 1199
BspTNI	GGTCTC	2 cut(s)	88, 1051
BsrDI	GCAATG	2 cut(s)	538, 1826
BsrFI	RCCGGY	1 cut(s)	671
BsrGI	TGTACA	1 cut(s)	909
BsrI	ACTGG	3 cut(s)	275, 685, 1689
BssAI	RCCGGY	1 cut(s)	671
BssECI	CCNNGG	2 cut(s)	995, 1570
BssMI	GATC	6 cut(s)	694, 946, 1314, 1393, 1784, 1961
BssNAI	GTATAC	1 cut(s)	63
BssT1I	CCWWGG	2 cut(s)	995, 1570
Bst1107I	GTATAC	1 cut(s)	63
Bst2UI	CCWGG	3 cut(s)	1062, 1547, 1743
Bst4CI	ACNGT	9 cut(s)	12, 914, 1199, 1636, 1674, 1763, 1894, 1926, 2077
BstAPI	GCANNNNNTGC	1 cut(s)	540
BstAUI	TGTACA	1 cut(s)	909
BstBAI	YACGTR	1 cut(s)	1861
BstBI	TTCGAA	1 cut(s)	1354
BstC8I	GCNNGC	5 cut(s)	20, 72, 579, 673, 1252
BstDEI	CTNAG	1 cut(s)	587
BstEII	GGTNACC	1 cut(s)	989
BstENI	CCTNNNNNAGG	1 cut(s)	1065
BstF5I	GGATG	8 cut(s)	87, 232, 280, 286, 379, 889, 892, 1279
BstFNI	CGCG	2 cut(s)	987, 1170
BstH2I	RGCGCY	1 cut(s)	1464
BstHHI	GCGC	2 cut(s)	644, 1463
BstKTI	GATC	6 cut(s)	697, 949, 1317, 1396, 1787, 1964
BstMAI	GTCTC	4 cut(s)	88, 863, 1051, 1443
BstMBI	GATC	6 cut(s)	694, 946, 1314, 1393, 1784, 1961
BstMWI	GCNNNNNNNGC	5 cut(s)	236, 540, 549, 583, 1247
BstNI	CCWGG	3 cut(s)	1062, 1547, 1743
BstNSI	RCATGY	3 cut(s)	22, 212, 249
BstPAI	GACNNNNGTC	1 cut(s)	1127
BstPI	GGTNACC	1 cut(s)	989
BstSCI	CCNGG	3 cut(s)	1060, 1545, 1741
BstSFI	CTRYAG	1 cut(s)	1456
BstSLI	GKGCMC	1 cut(s)	1034
BstUI	CGCG	2 cut(s)	987, 1170
BstV1I	GCAGC	2 cut(s)	151, 161
BstV2I	GAAGAC	2 cut(s)	170, 1478
BstX2I	RGATCY	3 cut(s)	946, 1784, 1961
BstXI	CCANNNNNNTGG	1 cut(s)	1042
BstYI	RGATCY	3 cut(s)	946, 1784, 1961
BstZ17I	GTATAC	1 cut(s)	63
Bsu15I	ATCGAT	1 cut(s)	1317
BsuRI	GGCC	2 cut(s)	824, 2013
BsuTUI	ATCGAT	1 cut(s)	1317
BtgZI	GCGATG	1 cut(s)	1454
BtsCI	GGATG	8 cut(s)	87, 232, 280, 286, 379, 889, 892, 1279
BtsI	GCAGTG	1 cut(s)	246
BtsIMutI	CAGTG	4 cut(s)	246, 971, 1641, 1768
BveI	ACCTGC	1 cut(s)	539
Cac8I	GCNNGC	5 cut(s)	20, 72, 579, 673, 1252
CciI	TCATGA	1 cut(s)	1326
CfoI	GCGC	2 cut(s)	644, 1463
Cfr10I	RCCGGY	1 cut(s)	671
Cfr13I	GGNCC	3 cut(s)	682, 799, 823
ClaI	ATCGAT	1 cut(s)	1317
CseI	GACGC	2 cut(s)	749, 1176
CsiI	ACCWGGT	1 cut(s)	1060
Csp6I	GTAC	4 cut(s)	910, 1005, 1065, 1200
CviQI	GTAC	4 cut(s)	910, 1005, 1065, 1200
DdeI	CTNAG	1 cut(s)	587
DpnI	GATC	6 cut(s)	696, 948, 1316, 1395, 1786, 1963
DpnII	GATC	6 cut(s)	694, 946, 1314, 1393, 1784, 1961
DraI	TTTAAA	1 cut(s)	352
DriI	GACNNNNNGTC	1 cut(s)	1482
Eam1105I	GACNNNNNGTC	1 cut(s)	1482
EciI	GGCGGA	1 cut(s)	672
Ecl136II	GAGCTC	1 cut(s)	707
Eco130I	CCWWGG	2 cut(s)	995, 1570
Eco24I	GRGCYC	2 cut(s)	289, 709
Eco31I	GGTCTC	2 cut(s)	88, 1051
Eco47I	GGWCC	2 cut(s)	682, 799
Eco53kI	GAGCTC	1 cut(s)	707
Eco88I	CYCGRG	3 cut(s)	702, 1048, 1429
Eco91I	GGTNACC	1 cut(s)	989
EcoICRI	GAGCTC	1 cut(s)	707
EcoNI	CCTNNNNNAGG	1 cut(s)	1065
EcoO109I	RGGNCCY	2 cut(s)	799, 823
EcoO65I	GGTNACC	1 cut(s)	989
EcoRII	CCWGG	3 cut(s)	1060, 1545, 1741
EcoT14I	CCWWGG	2 cut(s)	995, 1570
EcoT38I	GRGCYC	2 cut(s)	289, 709
ErhI	CCWWGG	2 cut(s)	995, 1570
Esp3I	CGTCTC	1 cut(s)	1443
FauI	CCCGC	3 cut(s)	570, 803, 1163
FblI	GTMKAC	3 cut(s)	62, 1185, 1857
Fnu4HI	GCNGC	3 cut(s)	150, 165, 676
FokI	GGATG	8 cut(s)	94, 239, 287, 293, 386, 879, 896, 1286
FriOI	GRGCYC	2 cut(s)	289, 709
Fsp4HI	GCNGC	3 cut(s)	150, 165, 676
FspBI	CTAG	6 cut(s)	99, 335, 996, 1332, 1397, 1650
GlaI	GCGC	2 cut(s)	643, 1462
GluI	GCNGC	3 cut(s)	150, 165, 676
HaeII	RGCGCY	1 cut(s)	1464
HaeIII	GGCC	2 cut(s)	824, 2013
HapII	CCGG	4 cut(s)	654, 672, 818, 944
HgaI	GACGC	2 cut(s)	749, 1176
HhaI	GCGC	2 cut(s)	644, 1463
Hin6I	GCGC	2 cut(s)	642, 1461
HinP1I	GCGC	2 cut(s)	642, 1461
HincII	GTYRAC	2 cut(s)	835, 1186
HindII	GTYRAC	2 cut(s)	835, 1186
HinfI	GANTC	8 cut(s)	660, 751, 1319, 1480, 1520, 1646, 1766, 1854
HpaI	GTTAAC	1 cut(s)	835
HpaII	CCGG	4 cut(s)	654, 672, 818, 944
HphI	GGTGA	5 cut(s)	520, 681, 1001, 1287, 1606
Hpy166II	GTNNAC	8 cut(s)	63, 139, 835, 910, 1007, 1122, 1186, 1858
Hpy188I	TCNGA	6 cut(s)	81, 627, 750, 778, 1166, 1733
Hpy188III	TCNNGA	8 cut(s)	115, 218, 794, 881, 1048, 1327, 1524, 1834
Hpy8I	GTNNAC	8 cut(s)	63, 139, 835, 910, 1007, 1122, 1186, 1858
Hpy99I	CGWCG	3 cut(s)	765, 1170, 1854
HpyAV	CCTTC	3 cut(s)	1088, 1171, 1546
HpyCH4III	ACNGT	9 cut(s)	12, 914, 1199, 1636, 1674, 1763, 1894, 1926, 2077
HpyCH4IV	ACGT	7 cut(s)	453, 555, 837, 1104, 1578, 1600, 1860
HpyF10VI	GCNNNNNNNGC	5 cut(s)	236, 540, 549, 583, 1247
HpyF3I	CTNAG	1 cut(s)	587
HpySE526I	ACGT	7 cut(s)	453, 555, 837, 1104, 1578, 1600, 1860
HspAI	GCGC	2 cut(s)	642, 1461
KpnI	GGTACC	1 cut(s)	1203
KroI	GCCGGC	1 cut(s)	671
KroNI	GCCGGC	1 cut(s)	673
KspAI	GTTAAC	1 cut(s)	835
Kzo9I	GATC	6 cut(s)	694, 946, 1314, 1393, 1784, 1961
LmnI	GCTCC	1 cut(s)	712
Lsp1109I	GCAGC	2 cut(s)	151, 161
LweI	GCATC	1 cut(s)	217
MabI	ACCWGGT	1 cut(s)	1060
MaeI	CTAG	6 cut(s)	99, 335, 996, 1332, 1397, 1650
MaeII	ACGT	7 cut(s)	453, 555, 837, 1104, 1578, 1600, 1860
MaeIII	GTNAC	9 cut(s)	241, 449, 687, 764, 989, 1129, 1579, 1763, 1861
MalI	GATC	6 cut(s)	696, 948, 1316, 1395, 1786, 1963
MboI	GATC	6 cut(s)	694, 946, 1314, 1393, 1784, 1961
MboII	GAAGA	5 cut(s)	32, 170, 1478, 1746, 2048
MflI	RGATCY	3 cut(s)	946, 1784, 1961
MhlI	GDGCHC	3 cut(s)	289, 709, 1034
MlyI	GAGTC	4 cut(s)	760, 1529, 1760, 1863
MmeI	TCCRAC	2 cut(s)	1189, 1731
MreI	CGCCGGCG	1 cut(s)	671
MroNI	GCCGGC	1 cut(s)	671
MslI	CAYNNNNRTG	1 cut(s)	144
MspA1I	CMGCKG	1 cut(s)	2060
MspI	CCGG	4 cut(s)	654, 672, 818, 944
MspR9I	CCNGG	3 cut(s)	1062, 1547, 1743
Mva1269I	GAATGC	1 cut(s)	151
MvaI	CCWGG	3 cut(s)	1062, 1547, 1743
MvnI	CGCG	2 cut(s)	987, 1170
MwoI	GCNNNNNNNGC	5 cut(s)	236, 540, 549, 583, 1247
NaeI	GCCGGC	1 cut(s)	673
NdeII	GATC	6 cut(s)	694, 946, 1314, 1393, 1784, 1961
NgoMIV	GCCGGC	1 cut(s)	671
NlaIV	GGNNCC	6 cut(s)	936, 948, 1033, 1072, 1201, 1786
NmuCI	GTSAC	6 cut(s)	241, 687, 989, 1129, 1763, 1861
NspI	RCATGY	3 cut(s)	22, 212, 249
NspV	TTCGAA	1 cut(s)	1354
PaeI	GCATGC	1 cut(s)	22
PaeR7I	CTCGAG	3 cut(s)	702, 1048, 1429
PagI	TCATGA	1 cut(s)	1326
PaqCI	CACCTGC	1 cut(s)	539
PciI	ACATGT	1 cut(s)	245
PctI	GAATGC	1 cut(s)	151
PdiI	GCCGGC	1 cut(s)	673
PfeI	GAWTC	4 cut(s)	660, 1319, 1480, 1646
PflMI	CCANNNNNTGG	1 cut(s)	1309
PfoI	TCCNGGA	1 cut(s)	1741
PkrI	GCNGC	3 cut(s)	151, 166, 677
PleI	GAGTC	4 cut(s)	759, 1528, 1760, 1862
PpsI	GAGTC	4 cut(s)	759, 1528, 1760, 1862
Ppu21I	YACGTR	1 cut(s)	1861
PpuMI	RGGWCCY	1 cut(s)	799
PscI	ACATGT	1 cut(s)	245
PshAI	GACNNNNGTC	1 cut(s)	1127
PshBI	ATTAAT	1 cut(s)	120
Psp124BI	GAGCTC	1 cut(s)	709
Psp1406I	AACGTT	2 cut(s)	837, 1578
Psp5II	RGGWCCY	1 cut(s)	799
Psp6I	CCWGG	3 cut(s)	1060, 1545, 1741
PspEI	GGTNACC	1 cut(s)	989
PspGI	CCWGG	3 cut(s)	1060, 1545, 1741
PspN4I	GGNNCC	6 cut(s)	936, 948, 1033, 1072, 1201, 1786
PspPI	GGNCC	3 cut(s)	682, 799, 823
PspPPI	RGGWCCY	1 cut(s)	799
PspXI	VCTCGAGB	2 cut(s)	702, 1429
PsuI	RGATCY	3 cut(s)	946, 1784, 1961
PvuII	CAGCTG	1 cut(s)	2060
RsaI	GTAC	4 cut(s)	911, 1006, 1066, 1201
RsaNI	GTAC	4 cut(s)	910, 1005, 1065, 1200
RseI	CAYNNNNRTG	1 cut(s)	144
SacI	GAGCTC	1 cut(s)	709
SalI	GTCGAC	1 cut(s)	1184
SatI	GCNGC	3 cut(s)	150, 165, 676
Sau3AI	GATC	6 cut(s)	694, 946, 1314, 1393, 1784, 1961
Sau96I	GGNCC	3 cut(s)	682, 799, 823
SchI	GAGTC	4 cut(s)	760, 1529, 1760, 1863
ScrFI	CCNGG	3 cut(s)	1062, 1547, 1743
SduI	GDGCHC	3 cut(s)	289, 709, 1034
SexAI	ACCWGGT	1 cut(s)	1060
SfaNI	GCATC	1 cut(s)	217
SfcI	CTRYAG	1 cut(s)	1456
Sfr274I	CTCGAG	3 cut(s)	702, 1048, 1429
SfuI	TTCGAA	1 cut(s)	1354
SgrAI	CRCCGGYG	1 cut(s)	671
SinI	GGWCC	2 cut(s)	682, 799
SlaI	CTCGAG	3 cut(s)	702, 1048, 1429
SmiMI	CAYNNNNRTG	1 cut(s)	144
SmlI	CTYRAG	5 cut(s)	467, 547, 702, 1048, 1429
SmoI	CTYRAG	5 cut(s)	467, 547, 702, 1048, 1429
SphI	GCATGC	1 cut(s)	22
SsiI	CCGC	8 cut(s)	434, 460, 577, 657, 675, 810, 987, 1170
SspMI	CTAG	6 cut(s)	99, 335, 996, 1332, 1397, 1650
SstI	GAGCTC	1 cut(s)	709
StyD4I	CCNGG	3 cut(s)	1060, 1545, 1741
StyI	CCWWGG	2 cut(s)	995, 1570
TaaI	ACNGT	9 cut(s)	12, 914, 1199, 1636, 1674, 1763, 1894, 1926, 2077
TaiI	ACGT	7 cut(s)	456, 558, 840, 1107, 1581, 1603, 1863
TaqI	TCGA	9 cut(s)	476, 703, 727, 1049, 1185, 1317, 1354, 1430, 1769
TatI	WGTACW	1 cut(s)	909
TauI	GCSGC	1 cut(s)	678
TfiI	GAWTC	4 cut(s)	660, 1319, 1480, 1646
TscAI	CASTG	4 cut(s)	246, 978, 1641, 1768
TseFI	GTSAC	6 cut(s)	241, 687, 989, 1129, 1763, 1861
TseI	GCWGC	2 cut(s)	149, 164
Tsp45I	GTSAC	6 cut(s)	241, 687, 989, 1129, 1763, 1861
TspDTI	ATGAA	6 cut(s)	279, 522, 632, 881, 1770, 2055
TspRI	CASTG	4 cut(s)	246, 978, 1641, 1768
Van91I	CCANNNNNTGG	1 cut(s)	1309
VpaK11BI	GGWCC	2 cut(s)	682, 799
VspI	ATTAAT	1 cut(s)	120
XagI	CCTNNNNNAGG	1 cut(s)	1065
XapI	RAATTY	3 cut(s)	55, 347, 621
XceI	RCATGY	3 cut(s)	22, 212, 249
XhoI	CTCGAG	3 cut(s)	702, 1048, 1429
XmaJI	CCTAGG	1 cut(s)	995
XmiI	GTMKAC	3 cut(s)	62, 1185, 1857
XspI	CTAG	6 cut(s)	99, 335, 996, 1332, 1397, 1650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.