Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000899

Physical Location & Seq

Genomic Coordinates Reverse (-)

60300476 .. 60304901

Gene Structure 4426 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0471400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGTCGAGTGAATTTCCGGTGAGAGCTCGTGGCCGCTTGGCCGTGCTTTCGGCCCACCTCGCCGCCGCAACCATCTCCGGGTCCTCGGAGCTCGAGCCTCAGTGCTTGTCGGCCCAGGTCCCACCTCCGGGGAACCTCCGCGGCGCTTTGACCGTCGTTGACGAGAGGACCGGTAAGCGGTACCAGGTCCAGGTCTCCGAACAAGGAACCGTCAAGGCCACTGATCTCAAAAAGATTAGTTCGGGGAAGAATGATAAGGGGCTGAAGCTGTATGATCCGGGATATCTCAACACTGCGCCGGTTCGATCCTCGATTTGCTATATTGATGGAGACGAGGGGATTCTTAGGTACAGAGGGTATCCAATTGAGGAATTGGCTGAGAGTAGTACTTATTTGGAAGTGGCATATCTCCTCATGTATGGGAATTTGCCGTCTCAAAGCCAATTAGCGGATTGGGAATTTGCTGTTACTCAGCATTCAGCTGTACCACAGGGGATTTTGGATATTATACAAACAATACCTCATGATGCACATCCAATGGGTGTACTTGTCAGCGCAATGAGTGCTCTTTCTGTTTTTCACCCTGATGCCAATCCTGCCCTCAGAGGGCAAGACCTTTACCAGTCCAAACAAGTGAGAGACAAACAAATTGCACGGATTCTTGGGAAGGCACCAACTATTGCAGCAGCAGCTTATTTGAGATTGGCAGGAAGACCCCCAGTTCTTCCATCTAACAACCTTTCTTATTCCGAGAACTTCTTATACATGCTAGACTCCTTGGGCAATAGATCTTATAAACCAAATCCCCGCCTCGCCCGAGTATTGGACATTCTCTTCATACTCCACGCTGAACATGAGATGAATTGCTCAACGGCTGCTGCTCGGCATCTGGCGTCAAGTGGTGTGGATGTTTACACTGCCCTTTCTGGAGCTGTTGGAGCTCTATATGGTCCTCTTCATGGTGGAGCAAATGAGGCTGTGCTTAAGATGTTAAGTGAAATTGGATCTGTTGAGAACATTCCAGAGTTCATTGAGGGTGTGAAGAGCAGGAAGCGAAAGATGTCAGGTTTTGGTCATCGCGTGTACAAGAACTATGATCCTAGAGCAAAGGTCATAAGAAAGCTGGCAGATGAAGTATTCTCCATTGTTGGAAGGGATCCACTGATTGAGGTTGCTGTTGCTTTGGAGAAAGCTGCACTATCTGATGAGTATTTTGTTAAGAGAAAGCTGTATCCTAATGTTGATTTCTACTCTGGGTTGATATATAGGGCAATGGGATTTCCAACGGAGTTCTTCCCAGTTTTATTTGCAATCCCTAGAATGGCTGGTTACTTGGCACACTGGAGAGAATCCCTGGATGATCCTGATACTAAGATTATGAGGCCCGCACAGGTATATGTTGGGGAGTGGCTGCGGCACTATATGCCATTGAAAGAACGGATAGTGAGCACTGATGCAGACAAACTGTCTCAAGTTTCTGTTTCAAACGCCTCTAAGCGTCGTTTGTCTGGATCTGGAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0030312 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1204 Stress-antifung

Protein Analysis

507

Amino Acids

55.77

Weight (kDa)

8.9

Isoelectric Point (pI)

40.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Citrate_synt	PF00285	94 - 463	6.8e-135	Citrate synthase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000899)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22060
fragaria_vesca	FvH4_2g10161
malus_domestica	MD05G1056000.v1.1 MD05G1056300.v1.1 MD10G1064400.v1.1
prunus_persica	Prupe.3G109800_v2.0.a1 Prupe.3G110100_v2.0.a1 Prupe.3G110200_v2.0.a1 Prupe.3G110300_v2.0.a1 Prupe.8G086600_v2.0.a1
pyrus_communis	pycom05g04770 pycom05g04780
rosa_chinensis	RchiOBHm_Chr1g0328011 RchiOBHm_Chr1g0328031 RchiOBHm_Chr2g0158681 RchiOBHm_Chr2g0160231 RchiOBHm_Chr2g0160251
rosa_laevigata	RLG00000014015 RLG00000021106 RLG00000021206 RLG00000021207 RLG00000029943 RLG00000029944 RLG00000029946 RLG00000029948
rosa_multiflora	Rmu_co8269469.1_g000001 Rmu_co8408147.1_g000001 Rmu_sc0000403.1_g000003 Rmu_sc0008269.1_g000008 Rmu_sc0020806.1_g000002
rosa_roxburghii	Rroxscaffold_2G00091070 Rroxscaffold_2G00091110 Rroxscaffold_4G00321960 Rroxscaffold_4G00321970 Rroxscaffold_4G00321980 Rroxscaffold_4G00322000 Rroxscaffold_4G00322030 Rroxscaffold_7G00200860 Rroxscaffold_7G00200940
rosa_rugosa	Rorug01G0073200 Rorug01G0073200 Rorug01G0073300 Rorug02G0471400 Rorug02G0472000 Rorug02G0482400 Rorug02G0482400
rosa_samantha	Rh1BG071900 Rh1BG072100 Rh2AG537200 Rh2AG547800 Rh2BG550400 Rh2BG561200 Rh2BG561400 Rh2CG520900 Rh2CG531800 Rh2CG532100 Rh6AG153200 Rh6CG149000
rosa_wichuraiana	Rw0G019500 Rw1G006970 Rw1G006980 Rw1G006990 Rw2G044480 Rw2G045320 Rw6G013180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	795
Acc65I	GGTACC	1 cut(s)	180
AccB1I	GGYRCC	2 cut(s)	180, 670
AccII	CGCG	2 cut(s)	141, 1080
AclWI	GGATC	8 cut(s)	269, 300, 1012, 1091, 1151, 1164, 1355, 1519
AcoI	YGGCCR	2 cut(s)	31, 39
AcsI	RAATTY	3 cut(s)	11, 424, 458
AcuI	CTGAAG	1 cut(s)	284
AcyI	GRCGYC	1 cut(s)	893
AfaI	GTAC	6 cut(s)	182, 350, 388, 486, 546, 1085
AflII	CTTAAG	1 cut(s)	983
AgeI	ACCGGT	1 cut(s)	170
AgsI	TTSAA	2 cut(s)	1432, 1485
AhdI	GACNNNNNGTC	1 cut(s)	1465
AjnI	CCWGG	4 cut(s)	114, 183, 189, 1353
Alw21I	GWGCWC	5 cut(s)	28, 93, 568, 943, 1451
Alw26I	GTCTC	5 cut(s)	199, 324, 438, 633, 1473
AlwI	GGATC	8 cut(s)	269, 300, 1012, 1091, 1151, 1164, 1355, 1519
Ama87I	CYCGRG	2 cut(s)	92, 816
AoxI	GGCC	6 cut(s)	31, 39, 51, 111, 216, 1382
ApeKI	GCWGC	7 cut(s)	683, 686, 689, 875, 878, 1193, 1411
ApoI	RAATTY	3 cut(s)	11, 424, 458
AsiGI	ACCGGT	1 cut(s)	170
Asp718I	GGTACC	1 cut(s)	180
AspLEI	GCGC	3 cut(s)	146, 298, 557
AspS9I	GGNCC	8 cut(s)	52, 81, 112, 118, 168, 187, 950, 1383
AsuC2I	CCSGG	3 cut(s)	79, 129, 279
AsuHPI	GGTGA	2 cut(s)	31, 572
AvaI	CYCGRG	2 cut(s)	92, 816
AvaII	GGWCC	5 cut(s)	81, 118, 168, 187, 950
BamHI	GGATCC	1 cut(s)	1156
BanI	GGYRCC	2 cut(s)	180, 670
BanII	GRGCYC	3 cut(s)	28, 93, 943
BauI	CACGAG	1 cut(s)	27
BbsI	GAAGAC	1 cut(s)	718
Bbv12I	GWGCWC	5 cut(s)	28, 93, 568, 943, 1451
BbvI	GCAGC	7 cut(s)	695, 698, 701, 862, 865, 1180, 1398
BccI	CCATC	3 cut(s)	80, 320, 736
BceAI	ACGGC	3 cut(s)	26, 415, 888
BciT130I	CCWGG	4 cut(s)	116, 185, 191, 1355
BciVI	GTATCC	2 cut(s)	369, 1242
BcnI	CCSGG	3 cut(s)	79, 129, 279
BcoDI	GTCTC	5 cut(s)	199, 324, 438, 633, 1473
BfaI	CTAG	3 cut(s)	770, 1101, 1317
BfoI	RGCGCY	1 cut(s)	147
BfrI	CTTAAG	1 cut(s)	983
BfuI	GTATCC	2 cut(s)	369, 1242
BglII	AGATCT	1 cut(s)	788
BmcAI	AGTACT	1 cut(s)	388
Bme1390I	CCNGG	7 cut(s)	79, 116, 129, 185, 191, 279, 1355
Bme18I	GGWCC	5 cut(s)	81, 118, 168, 187, 950
BmeRI	GACNNNNNGTC	1 cut(s)	1465
BmeT110I	CYCGRG	2 cut(s)	92, 816
BmgT120I	GGNCC	8 cut(s)	52, 81, 112, 118, 168, 187, 950, 1383
BmiI	GGNNCC	7 cut(s)	82, 120, 134, 182, 208, 672, 1158
BmrFI	CCNGG	7 cut(s)	79, 116, 129, 185, 191, 279, 1355
BmrI	ACTGGG	2 cut(s)	713, 1292
BmsI	GCATC	4 cut(s)	517, 577, 895, 1444
BmuI	ACTGGG	2 cut(s)	713, 1292
BpiI	GAAGAC	1 cut(s)	718
BpmI	CTGGAG	2 cut(s)	948, 1363
BpuEI	CTTGAG	1 cut(s)	1455
BpuMI	CCSGG	3 cut(s)	79, 129, 279
BsaBI	GATNNNNATC	2 cut(s)	531, 591
BsaHI	GRCGYC	1 cut(s)	893
BsaI	GGTCTC	1 cut(s)	199
BsaJI	CCNNGG	6 cut(s)	84, 114, 128, 139, 777, 1353
BsaWI	WCCGGW	2 cut(s)	16, 170
Bse118I	RCCGGY	2 cut(s)	170, 298
Bse1I	ACTGG	4 cut(s)	622, 719, 1298, 1346
Bse3DI	GCAATG	2 cut(s)	564, 1278
Bse8I	GATNNNNATC	2 cut(s)	531, 591
BseBI	CCWGG	4 cut(s)	116, 185, 191, 1355
BseDI	CCNNGG	6 cut(s)	84, 114, 128, 139, 777, 1353
BseGI	GGATG	3 cut(s)	532, 913, 1363
BseJI	GATNNNNATC	2 cut(s)	531, 591
BseMI	GCAATG	2 cut(s)	564, 1278
BseMII	CTCAG	4 cut(s)	113, 369, 485, 616
BseNI	ACTGG	4 cut(s)	622, 719, 1298, 1346
BseRI	GAGGAG	1 cut(s)	401
BseXI	GCAGC	7 cut(s)	695, 698, 701, 862, 865, 1180, 1398
BsgI	GTGCAG	1 cut(s)	1179
Bsh1236I	CGCG	2 cut(s)	141, 1080
BshFI	GGCC	6 cut(s)	33, 41, 53, 113, 218, 1384
BshNI	GGYRCC	2 cut(s)	180, 670
BshTI	ACCGGT	1 cut(s)	170
BsiHKAI	GWGCWC	5 cut(s)	28, 93, 568, 943, 1451
BsiHKCI	CYCGRG	2 cut(s)	92, 816
BsiSI	CCGG	6 cut(s)	17, 78, 128, 171, 278, 299
BslFI	GGGAC	1 cut(s)	104
BsmAI	GTCTC	5 cut(s)	199, 324, 438, 633, 1473
BsmBI	CGTCTC	2 cut(s)	324, 438
BsmFI	GGGAC	1 cut(s)	104
BsmI	GAATGC	1 cut(s)	475
BsnI	GGCC	6 cut(s)	33, 41, 53, 113, 218, 1384
Bso31I	GGTCTC	1 cut(s)	199
BsoBI	CYCGRG	2 cut(s)	92, 816
Bsp1286I	GDGCHC	5 cut(s)	28, 93, 568, 943, 1451
Bsp1407I	TGTACA	1 cut(s)	1083
Bsp143I	GATC	9 cut(s)	223, 274, 305, 788, 1004, 1096, 1156, 1360, 1511
BspANI	GGCC	6 cut(s)	33, 41, 53, 113, 218, 1384
BspCNI	CTCAG	4 cut(s)	112, 370, 484, 615
BspFNI	CGCG	2 cut(s)	141, 1080
BspHI	TCATGA	1 cut(s)	523
BspLI	GGNNCC	7 cut(s)	82, 120, 134, 182, 208, 672, 1158
BspPI	GGATC	8 cut(s)	269, 300, 1012, 1091, 1151, 1164, 1355, 1519
BspQI	GCTCTTC	1 cut(s)	1037
BspT107I	GGYRCC	2 cut(s)	180, 670
BspTI	CTTAAG	1 cut(s)	983
BspTNI	GGTCTC	1 cut(s)	199
BsrDI	GCAATG	2 cut(s)	564, 1278
BsrFI	RCCGGY	2 cut(s)	170, 298
BsrGI	TGTACA	1 cut(s)	1083
BsrI	ACTGG	4 cut(s)	622, 719, 1298, 1346
BssAI	RCCGGY	2 cut(s)	170, 298
BssECI	CCNNGG	6 cut(s)	84, 114, 128, 139, 777, 1353
BssMI	GATC	9 cut(s)	223, 274, 305, 788, 1004, 1096, 1156, 1360, 1511
BssNI	GRCGYC	1 cut(s)	893
BssSI	CACGAG	1 cut(s)	27
BssT1I	CCWWGG	1 cut(s)	777
Bst2BI	CACGAG	1 cut(s)	27
Bst2UI	CCWGG	4 cut(s)	116, 185, 191, 1355
Bst4CI	ACNGT	3 cut(s)	154, 211, 1467
Bst6I	CTCTTC	3 cut(s)	839, 960, 1037
BstACI	GRCGYC	1 cut(s)	893
BstAFI	CTTAAG	1 cut(s)	983
BstAPI	GCANNNNNTGC	2 cut(s)	563, 1423
BstAUI	TGTACA	1 cut(s)	1083
BstC8I	GCNNGC	2 cut(s)	1125, 1386
BstDEI	CTNAG	7 cut(s)	99, 344, 378, 471, 602, 1371, 1494
BstDSI	CCRYGG	1 cut(s)	139
BstF5I	GGATG	3 cut(s)	532, 913, 1363
BstFNI	CGCG	2 cut(s)	141, 1080
BstH2I	RGCGCY	1 cut(s)	147
BstHHI	GCGC	3 cut(s)	146, 298, 557
BstKTI	GATC	9 cut(s)	226, 277, 308, 791, 1007, 1099, 1159, 1363, 1514
BstMAI	GTCTC	5 cut(s)	199, 324, 438, 633, 1473
BstMBI	GATC	9 cut(s)	223, 274, 305, 788, 1004, 1096, 1156, 1360, 1511
BstMWI	GCNNNNNNNGC	7 cut(s)	59, 563, 596, 689, 938, 974, 1423
BstNI	CCWGG	4 cut(s)	116, 185, 191, 1355
BstNSI	RCATGY	1 cut(s)	769
BstSCI	CCNGG	7 cut(s)	77, 114, 127, 183, 189, 277, 1353
BstUI	CGCG	2 cut(s)	141, 1080
BstV1I	GCAGC	7 cut(s)	695, 698, 701, 862, 865, 1180, 1398
BstV2I	GAAGAC	1 cut(s)	718
BstX2I	RGATCY	4 cut(s)	788, 1004, 1156, 1511
BstYI	RGATCY	4 cut(s)	788, 1004, 1156, 1511
BsuI	GTATCC	2 cut(s)	369, 1242
BsuRI	GGCC	6 cut(s)	33, 41, 53, 113, 218, 1384
BtgI	CCRYGG	1 cut(s)	139
BtgZI	GCGATG	1 cut(s)	1061
BtsCI	GGATG	3 cut(s)	532, 913, 1363
BtsI	GCAGTG	2 cut(s)	291, 915
BtsIMutI	CAGTG	7 cut(s)	107, 219, 291, 915, 1160, 1339, 1449
Cac8I	GCNNGC	2 cut(s)	1125, 1386
CciI	TCATGA	1 cut(s)	523
CfoI	GCGC	3 cut(s)	146, 298, 557
Cfr10I	RCCGGY	2 cut(s)	170, 298
Cfr13I	GGNCC	8 cut(s)	52, 81, 112, 118, 168, 187, 950, 1383
Cfr42I	CCGCGG	1 cut(s)	142
CseI	GACGC	2 cut(s)	882, 1487
CsiI	ACCWGGT	1 cut(s)	183
Csp6I	GTAC	6 cut(s)	181, 349, 387, 485, 545, 1084
CspAI	ACCGGT	1 cut(s)	170
CspCI	CAANNNNNGTGG	2 cut(s)	885, 920
CviAII	CATG	5 cut(s)	415, 524, 766, 854, 959
CviQI	GTAC	6 cut(s)	181, 349, 387, 485, 545, 1084
DdeI	CTNAG	7 cut(s)	99, 344, 378, 471, 602, 1371, 1494
DpnI	GATC	9 cut(s)	225, 276, 307, 790, 1006, 1098, 1158, 1362, 1513
DpnII	GATC	9 cut(s)	223, 274, 305, 788, 1004, 1096, 1156, 1360, 1511
DriI	GACNNNNNGTC	1 cut(s)	1465
EaeI	YGGCCR	2 cut(s)	31, 39
Eam1104I	CTCTTC	3 cut(s)	839, 960, 1037
Eam1105I	GACNNNNNGTC	1 cut(s)	1465
EarI	CTCTTC	3 cut(s)	839, 960, 1037
Ecl136II	GAGCTC	3 cut(s)	26, 91, 941
Eco130I	CCWWGG	1 cut(s)	777
Eco24I	GRGCYC	3 cut(s)	28, 93, 943
Eco31I	GGTCTC	1 cut(s)	199
Eco32I	GATATC	1 cut(s)	284
Eco47I	GGWCC	5 cut(s)	81, 118, 168, 187, 950
Eco53kI	GAGCTC	3 cut(s)	26, 91, 941
Eco57I	CTGAAG	1 cut(s)	284
Eco88I	CYCGRG	2 cut(s)	92, 816
EcoICRI	GAGCTC	3 cut(s)	26, 91, 941
EcoO109I	RGGNCCY	2 cut(s)	81, 118
EcoRII	CCWGG	4 cut(s)	114, 183, 189, 1353
EcoRV	GATATC	1 cut(s)	284
EcoT14I	CCWWGG	1 cut(s)	777
EcoT38I	GRGCYC	3 cut(s)	28, 93, 943
ErhI	CCWWGG	1 cut(s)	777
Esp3I	CGTCTC	2 cut(s)	324, 438
FaeI	CATG	5 cut(s)	418, 527, 769, 857, 962
FaqI	GGGAC	1 cut(s)	104
FatI	CATG	5 cut(s)	414, 523, 765, 853, 958
FauI	CCCGC	2 cut(s)	815, 1393
FokI	GGATG	3 cut(s)	519, 920, 1370
FriOI	GRGCYC	3 cut(s)	28, 93, 943
FspBI	CTAG	3 cut(s)	770, 1101, 1317
GlaI	GCGC	3 cut(s)	145, 297, 556
GsuI	CTGGAG	2 cut(s)	948, 1363
HaeII	RGCGCY	1 cut(s)	147
HaeIII	GGCC	6 cut(s)	33, 41, 53, 113, 218, 1384
HapII	CCGG	6 cut(s)	17, 78, 128, 171, 278, 299
HgaI	GACGC	2 cut(s)	882, 1487
HhaI	GCGC	3 cut(s)	146, 298, 557
Hin1I	GRCGYC	1 cut(s)	893
Hin1II	CATG	5 cut(s)	418, 527, 769, 857, 962
Hin6I	GCGC	3 cut(s)	144, 296, 555
HinP1I	GCGC	3 cut(s)	144, 296, 555
HincII	GTYRAC	1 cut(s)	160
HindII	GTYRAC	1 cut(s)	160
HinfI	GANTC	4 cut(s)	340, 658, 773, 1349
HpaII	CCGG	6 cut(s)	17, 78, 128, 171, 278, 299
HphI	GGTGA	2 cut(s)	31, 572
Hpy166II	GTNNAC	4 cut(s)	160, 545, 913, 1084
Hpy188I	TCNGA	5 cut(s)	88, 199, 605, 751, 1204
Hpy188III	TCNNGA	6 cut(s)	524, 927, 1022, 1364, 1509, 1515
Hpy8I	GTNNAC	4 cut(s)	160, 545, 913, 1084
Hpy99I	CGWCG	2 cut(s)	158, 1503
HpyAV	CCTTC	2 cut(s)	661, 1146
HpyCH4III	ACNGT	3 cut(s)	154, 211, 1467
HpyCH4V	TGCA	6 cut(s)	530, 653, 683, 1196, 1310, 1457
HpyF10VI	GCNNNNNNNGC	7 cut(s)	59, 563, 596, 689, 938, 974, 1423
HpyF3I	CTNAG	7 cut(s)	99, 344, 378, 471, 602, 1371, 1494
Hsp92I	GRCGYC	1 cut(s)	893
Hsp92II	CATG	5 cut(s)	418, 527, 769, 857, 962
HspAI	GCGC	3 cut(s)	144, 296, 555
KpnI	GGTACC	1 cut(s)	184
KspI	CCGCGG	1 cut(s)	142
Kzo9I	GATC	9 cut(s)	223, 274, 305, 788, 1004, 1096, 1156, 1360, 1511
LguI	GCTCTTC	1 cut(s)	1037
LmnI	GCTCC	4 cut(s)	88, 929, 938, 965
Lsp1109I	GCAGC	7 cut(s)	695, 698, 701, 862, 865, 1180, 1398
LweI	GCATC	4 cut(s)	517, 577, 895, 1444
MabI	ACCWGGT	1 cut(s)	183
MaeI	CTAG	3 cut(s)	770, 1101, 1317
MaeIII	GTNAC	2 cut(s)	466, 1328
MalI	GATC	9 cut(s)	225, 276, 307, 790, 1006, 1098, 1158, 1362, 1513
MboI	GATC	9 cut(s)	223, 274, 305, 788, 1004, 1096, 1156, 1360, 1511
MboII	GAAGA	7 cut(s)	259, 716, 723, 826, 947, 1054, 1285
MfeI	CAATTG	1 cut(s)	363
MflI	RGATCY	4 cut(s)	788, 1004, 1156, 1511
MhlI	GDGCHC	5 cut(s)	28, 93, 568, 943, 1451
MluCI	AATT	9 cut(s)	11, 363, 371, 424, 443, 458, 648, 862, 999
MlyI	GAGTC	1 cut(s)	767
MmeI	TCCRAC	3 cut(s)	916, 1129, 1307
MseI	TTAA	3 cut(s)	984, 992, 1218
MslI	CAYNNNNRTG	1 cut(s)	585
MspA1I	CMGCKG	2 cut(s)	141, 482
MspCI	CTTAAG	1 cut(s)	983
MspI	CCGG	6 cut(s)	17, 78, 128, 171, 278, 299
MspR9I	CCNGG	7 cut(s)	79, 116, 129, 185, 191, 279, 1355
MunI	CAATTG	1 cut(s)	363
Mva1269I	GAATGC	1 cut(s)	475
MvaI	CCWGG	4 cut(s)	116, 185, 191, 1355
MvnI	CGCG	2 cut(s)	141, 1080
MwoI	GCNNNNNNNGC	7 cut(s)	59, 563, 596, 689, 938, 974, 1423
NciI	CCSGG	3 cut(s)	79, 129, 279
NdeII	GATC	9 cut(s)	223, 274, 305, 788, 1004, 1096, 1156, 1360, 1511
NlaIII	CATG	5 cut(s)	418, 527, 769, 857, 962
NlaIV	GGNNCC	7 cut(s)	82, 120, 134, 182, 208, 672, 1158
NmeAIII	GCCGAG	1 cut(s)	862
NspI	RCATGY	1 cut(s)	769
PaeR7I	CTCGAG	1 cut(s)	92
PagI	TCATGA	1 cut(s)	523
PciSI	GCTCTTC	1 cut(s)	1037
PctI	GAATGC	1 cut(s)	475
PfeI	GAWTC	3 cut(s)	340, 658, 1349
PfoI	TCCNGGA	1 cut(s)	277
PinAI	ACCGGT	1 cut(s)	170
PleI	GAGTC	1 cut(s)	767
PpsI	GAGTC	1 cut(s)	767
PpuMI	RGGWCCY	2 cut(s)	81, 118
PsiI	TTATAA	1 cut(s)	795
Psp124BI	GAGCTC	3 cut(s)	28, 93, 943
Psp5II	RGGWCCY	2 cut(s)	81, 118
Psp6I	CCWGG	4 cut(s)	114, 183, 189, 1353
PspGI	CCWGG	4 cut(s)	114, 183, 189, 1353
PspN4I	GGNNCC	7 cut(s)	82, 120, 134, 182, 208, 672, 1158
PspPI	GGNCC	8 cut(s)	52, 81, 112, 118, 168, 187, 950, 1383
PspPPI	RGGWCCY	2 cut(s)	81, 118
PspXI	VCTCGAGB	1 cut(s)	92
PsrI	GAACNNNNNNTAC	2 cut(s)	746, 778
PsuI	RGATCY	4 cut(s)	788, 1004, 1156, 1511
PvuII	CAGCTG	1 cut(s)	482
RsaI	GTAC	6 cut(s)	182, 350, 388, 486, 546, 1085
RsaNI	GTAC	6 cut(s)	181, 349, 387, 485, 545, 1084
RseI	CAYNNNNRTG	1 cut(s)	585
SacI	GAGCTC	3 cut(s)	28, 93, 943
SacII	CCGCGG	1 cut(s)	142
SapI	GCTCTTC	1 cut(s)	1037
SaqAI	TTAA	3 cut(s)	984, 992, 1218
Sau3AI	GATC	9 cut(s)	223, 274, 305, 788, 1004, 1096, 1156, 1360, 1511
Sau96I	GGNCC	8 cut(s)	52, 81, 112, 118, 168, 187, 950, 1383
ScaI	AGTACT	1 cut(s)	388
SchI	GAGTC	1 cut(s)	767
ScrFI	CCNGG	7 cut(s)	79, 116, 129, 185, 191, 279, 1355
SduI	GDGCHC	5 cut(s)	28, 93, 568, 943, 1451
SexAI	ACCWGGT	1 cut(s)	183
SfaNI	GCATC	4 cut(s)	517, 577, 895, 1444
Sfr274I	CTCGAG	1 cut(s)	92
Sfr303I	CCGCGG	1 cut(s)	142
SgrBI	CCGCGG	1 cut(s)	142
SinI	GGWCC	5 cut(s)	81, 118, 168, 187, 950
SlaI	CTCGAG	1 cut(s)	92
SmiMI	CAYNNNNRTG	1 cut(s)	585
SmlI	CTYRAG	3 cut(s)	92, 983, 1470
SmoI	CTYRAG	3 cut(s)	92, 983, 1470
Sse9I	AATT	9 cut(s)	11, 363, 371, 424, 443, 458, 648, 862, 999
SspMI	CTAG	3 cut(s)	770, 1101, 1317
SstI	GAGCTC	3 cut(s)	28, 93, 943
StyD4I	CCNGG	7 cut(s)	77, 114, 127, 183, 189, 277, 1353
StyI	CCWWGG	1 cut(s)	777
TaaI	ACNGT	3 cut(s)	154, 211, 1467
TaqI	TCGA	4 cut(s)	5, 93, 304, 311
TasI	AATT	9 cut(s)	11, 363, 371, 424, 443, 458, 648, 862, 999
TatI	WGTACW	3 cut(s)	386, 544, 1083
TauI	GCSGC	5 cut(s)	36, 65, 68, 144, 1417
TfiI	GAWTC	3 cut(s)	340, 658, 1349
Tru1I	TTAA	3 cut(s)	984, 992, 1218
Tru9I	TTAA	3 cut(s)	984, 992, 1218
TscAI	CASTG	7 cut(s)	107, 226, 298, 922, 1167, 1346, 1456
TseI	GCWGC	7 cut(s)	683, 686, 689, 875, 878, 1193, 1411
TspDTI	ATGAA	5 cut(s)	826, 875, 947, 1018, 1146
TspGWI	ACGGA	3 cut(s)	670, 1301, 1453
TspRI	CASTG	7 cut(s)	107, 226, 298, 922, 1167, 1346, 1456
Vha464I	CTTAAG	1 cut(s)	983
VpaK11BI	GGWCC	5 cut(s)	81, 118, 168, 187, 950
XapI	RAATTY	3 cut(s)	11, 424, 458
XceI	RCATGY	1 cut(s)	769
XhoI	CTCGAG	1 cut(s)	92
XspI	CTAG	3 cut(s)	770, 1101, 1317
ZrmI	AGTACT	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.