Rorug02G0489400

Wound-induced protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000303
Physical Location & Seq
Forward (+)
61871104 .. 61873570
2467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0489400.1

Sequence Viewer

Length: 1527 bp
ATGAAGCAATCGGCAGAGCTAGTGTTTATCCCATCCCCAGGCATTGGCCACCTCGTGGCGACGGTGGAGGTCGCAAAGCTCCTCCTGTCTCGAGATGATCAACTCTTCATCACCGTCCTCATCATAAAGTTCCCGTTCAGCTCAGACGGCACTGATGCCTACGTTGAGTCCTTCGCGGACTCTTCCATATCAAATCGGATCAAGTTCATCAACCTCCCACAACAGAATATGGAGACACAAGGTAATAGCGCCATCAACCTCTTGAACTTCATTGACAATCATCAAACCAACGTTAAAGATGTTGTCACCAAACTCATCGAGTCCGAGACCAAGACTCGACTCACTGGGTTTGTCATCGACATGTTTTGTACCGCTATGATCGACGTAGCCAACGAATTAGGGGTTCCTACCTACATGTTTTTCACGTCCAGCGCCTCCATGCTAGGGGTCATGTTACACCTTCAAGCACTTCGTGATGACCACAACAAGGACTGCATTGAGTTCAAGGACTCGACTGCTGATTTGGTGGTCCCGAGTTACTCCAACCCCTTGCCAGCTGCTAGAGTCTTACTTAGTGTCTTGTTGGAAAAGGCGACCAGCGACAGGTTCTTCAACTTGGCCAAAAGGTGTAGAGATGTCAAGGGTATTTTGATAAATACATTCACAGAGCTGGAGTCGCATGCCCTTCTTTCTCTCAGTTCTGATGGTCAGATCCCTCCGGTGTATCCGGTGGGACCCATACTCAAGGTGAAGAGCGATGACAACAATGACCAAGTTGATTCGAAGCAGTCGAAGCAGAAGTCTGATATCTTGAAATGGCTCGATGATCAGCCTCCGTCGTCTGTAGTATTTCTGTGCTTCGGGAGCATGGGAAGCTTCAGTGAAGACCAGGTGAAAGAGATTGCCCGCGCATTGGAGCATGGAGGGTTTCGGTTCTTGTGGTCCCTACGTCAGCCTCCACCAAAGGGAACGATTGGAATGCCCAGCGACTATGCCGATCACACAGGGGTGTTACCCAAAGTCACACGAAACGCGGAACGCTGCGATTGTGGCAATGGGGTTGTTTTGGAGTCTGGTATGCCGTATGCTTTCGCCAACACCATGGGATCGCTAAACATAGCGATCCGGATCGCGAACGCCCCGCGATTGGGGTGGGCGCCGCAAGTTGCCATCTTAGCCCACCCAGCAGTCGGAGGTTTCGTCTCCCACTGTGGGTGGAATTCCACTCTGGAGAGCTTGTGGTTTGGAGTGCCGGTTGCCACGTGGCCTTTGTATGCCGAGCAACAACTAAATGCATTTCAGCTAGTTATGGAACTAGGGATAGCCGTGGAAATTGATATGAGTTATAGGAAGGATGGTCCAGTTGTTGTGACAGCAGAGAAAATTGAGAGTGGAATAAAGGAACTGATGGAGCTTGATAGTGATATAAGGAAGAGGGTGAAACAAATGAGTGATAGTAGCAAGAAAGCTTTGATGGATGGGGGGTGCTCATATACTGCGTTGGGACACTTCGTTGATCAAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3774

Protein Analysis

508

Amino Acids

55.86

Weight (kDa)

5.31

Isoelectric Point (pI)

43.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 383 - 448 2.5e-15 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000303)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G10265 AT4G10270
fragaria_vesca FvH4_3g21130 FvH4_6g44460 FvH4_6g44461 FvH4_6g44470
malus_domestica MD03G1217500.v1.1 MD09G1096800.v1.1 MD09G1096900.v1.1 MD09G1097000.v1.1 MD09G1097100.v1.1 MD11G1235200.v1.1 MD11G1235300.v1.1 MD17G1085100.v1.1 MD17G1085200.v1.1 MD17G1085300.v1.1 MD17G1085400.v1.1
prunus_persica Prupe.3G228900_v2.0.a1 Prupe.3G229000_v2.0.a1 Prupe.3G229300_v2.0.a1 Prupe.3G229400_v2.0.a1 Prupe.3G229500_v2.0.a1 Prupe.3G229700_v2.0.a1 Prupe.3G229800_v2.0.a1 Prupe.3G229900_v2.0.a1 Prupe.3G230000_v2.0.a1 Prupe.4G191800_v2.0.a1
pyrus_communis pycom03g16710 pycom09g02120 pycom09g02130 pycom1049g00030 pycom11g20680 pycom11g20690 pycom17g08250 pycom17g08260 pycom17g08270 pycom17g08280 pycom17g08290 pycom17g08310
rosa_chinensis RchiOBHm_Chr2g0161421 RchiOBHm_Chr2g0161441 RchiOBHm_Chr2g0161451 RchiOBHm_Chr2g0161461 RchiOBHm_Chr2g0161481 RchiOBHm_Chr2g0161491 RchiOBHm_Chr2g0161501 RchiOBHm_Chr2g0161511 RchiOBHm_Chr5g0036191
rosa_laevigata RLG00000021284 RLG00000021289
rosa_multiflora Rmu_co8259543.1_g000001 Rmu_sc0000247.1_g000003 Rmu_sc0003548.1_g000005 Rmu_sc0003548.1_g000011 Rmu_sc0003548.1_g000014 Rmu_sc0003548.1_g000015 Rmu_sc0003548.1_g000016 Rmu_sc0003548.1_g000017 Rmu_sc0006100.1_g000003 Rmu_sc0013925.1_g000002 Rmu_sc0013925.1_g000003 Rmu_sc0018798.1_g000001 Rmu_sc0040460.1_g000004
rosa_roxburghii Rroxscaffold_1G00044570 Rroxscaffold_2G00088730 Rroxscaffold_2G00088740 Rroxscaffold_2G00088750 Rroxscaffold_2G00088760 Rroxscaffold_2G00088770 Rroxscaffold_2G00088780 Rroxscaffold_2G00088800 Rroxscaffold_2G00088810 Rroxscaffold_2G00088830
rosa_rugosa Rorug02G0489400 Rorug02G0489800 Rorug02G0489900 Rorug02G0490000 Rorug02G0490100 Rorug02G0490200 Rorug02G0490300 Rorug05G0153500
rosa_samantha Rh2AG555700 Rh2AG555900 Rh2AG556100 Rh2AG556200 Rh2AG556300 Rh2AG556400 Rh2AG556500 Rh2BG568900 Rh2BG569100 Rh2BG569200 Rh2BG569400 Rh2BG569600 Rh2BG569700 Rh2BG569800 Rh2BG569900 Rh2CG539600 Rh2CG539800 Rh2CG540200 Rh2CG540300 Rh2CG540400 Rh2DG578500 Rh2DG578700 Rh2DG578800 Rh2DG579000 Rh2DG579100 Rh2DG579200 Rh2DG579300 Rh5BG248200 Rh5CG279600 Rh5DG256500
rosa_wichuraiana Rw2G045960 Rw2G045980 Rw2G046000 Rw2G046010 Rw2G046020 Rw2G046030 Rw2G046040 Rw5G022710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1156
AccB7I CCANNNNNTGG 2 cut(s) 44, 55
AccII CGCG 5 cut(s) 176, 909, 1034, 1133, 1144
AccIII TCCGGA 1 cut(s) 1125
AciI CCGC 6 cut(s) 176, 372, 907, 1034, 1142, 1160
AclI AACGTT 1 cut(s) 291
AclWI GGATC 5 cut(s) 206, 706, 1114, 1117, 1136
AcoI YGGCCR 2 cut(s) 46, 618
AcsI RAATTY 2 cut(s) 1219, 1521
AcuI CTGAAG 1 cut(s) 862
AcvI CACGTG 1 cut(s) 1263
AcyI GRCGYC 1 cut(s) 1157
AdeI CACNNNGTG 2 cut(s) 55, 473
AfaI GTAC 1 cut(s) 370
AflIII ACRYGT 2 cut(s) 360, 414
AgsI TTSAA 5 cut(s) 265, 464, 505, 613, 814
AjiI CACGTC 1 cut(s) 426
AjnI CCWGG 2 cut(s) 37, 888
AleI CACNNNNGTG 1 cut(s) 1007
Alw21I GWGCWC 1 cut(s) 1490
Alw26I GTCTC 4 cut(s) 93, 227, 320, 1207
AlwI GGATC 5 cut(s) 206, 706, 1114, 1117, 1136
Ama87I CYCGRG 2 cut(s) 90, 532
Aor13HI TCCGGA 1 cut(s) 1125
AoxI GGCC 3 cut(s) 46, 618, 1265
ApeKI GCWGC 2 cut(s) 557, 1041
ApoI RAATTY 2 cut(s) 1219, 1521
ArsI GACNNNNNNTTYG 4 cut(s) 505, 537, 785, 817
AspLEI GCGC 4 cut(s) 251, 434, 911, 1159
AspS9I GGNCC 4 cut(s) 529, 734, 942, 1358
AsuHPI GGTGA 5 cut(s) 103, 298, 760, 904, 1450
AsuII TTCGAA 1 cut(s) 782
AvaI CYCGRG 2 cut(s) 90, 532
AvaII GGWCC 4 cut(s) 529, 734, 942, 1358
BalI TGGCCA 2 cut(s) 48, 620
BanI GGYRCC 1 cut(s) 1156
BauI CACGAG 1 cut(s) 53
BbrPI CACGTG 1 cut(s) 1263
BbsI GAAGAC 1 cut(s) 891
Bbv12I GWGCWC 1 cut(s) 1490
BbvI GCAGC 2 cut(s) 544, 1028
BccI CCATC 8 cut(s) 40, 260, 698, 1178, 1349, 1402, 1468, 1472
BceAI ACGGC 3 cut(s) 163, 1066, 1310
BcgI CGANNNNNNTGC 2 cut(s) 961, 995
BciT130I CCWGG 2 cut(s) 39, 890
BciVI GTATCC 1 cut(s) 735
BclI TGATCA 3 cut(s) 97, 826, 1516
BcoDI GTCTC 4 cut(s) 93, 227, 320, 1207
BfaI CTAG 5 cut(s) 20, 443, 561, 1304, 1316
BfmI CTRYAG 1 cut(s) 843
BfoI RGCGCY 3 cut(s) 252, 435, 1160
BfuI GTATCC 1 cut(s) 735
BisI GCNGC 3 cut(s) 558, 1042, 1160
BlsI GCNGC 3 cut(s) 559, 1043, 1161
Bme1390I CCNGG 2 cut(s) 39, 890
Bme18I GGWCC 4 cut(s) 529, 734, 942, 1358
BmeT110I CYCGRG 2 cut(s) 90, 532
BmgBI CACGTC 1 cut(s) 426
BmgT120I GGNCC 4 cut(s) 529, 734, 942, 1358
BmiI GGNNCC 6 cut(s) 405, 531, 735, 736, 944, 1158
BmrFI CCNGG 2 cut(s) 39, 890
BmrI ACTGGG 1 cut(s) 354
BmsI GCATC 1 cut(s) 145
BmuI ACTGGG 1 cut(s) 354
BpiI GAAGAC 1 cut(s) 891
BpmI CTGGAG 2 cut(s) 692, 1250
Bpu14I TTCGAA 1 cut(s) 782
BpuEI CTTGAG 1 cut(s) 728
BsaAI YACGTR 1 cut(s) 1263
BsaBI GATNNNNATC 1 cut(s) 1127
BsaHI GRCGYC 1 cut(s) 1157
BsaI GGTCTC 1 cut(s) 320
BsaJI CCNNGG 3 cut(s) 37, 1101, 1326
BsaWI WCCGGW 3 cut(s) 718, 727, 1125
BsaXI ACNNNNNCTCC 6 cut(s) 1185, 1215, 1223, 1239, 1253, 1269
Bse118I RCCGGY 1 cut(s) 1252
Bse1I ACTGG 2 cut(s) 349, 1361
Bse3DI GCAATG 1 cut(s) 1060
Bse8I GATNNNNATC 1 cut(s) 1127
BseAI TCCGGA 1 cut(s) 1125
BseBI CCWGG 2 cut(s) 39, 890
BseDI CCNNGG 3 cut(s) 37, 1101, 1326
BseGI GGATG 3 cut(s) 32, 1360, 1483
BseJI GATNNNNATC 1 cut(s) 1127
BseMI GCAATG 1 cut(s) 1060
BseMII CTCAG 2 cut(s) 156, 709
BseNI ACTGG 2 cut(s) 349, 1361
BseRI GAGGAG 1 cut(s) 71
BseXI GCAGC 2 cut(s) 544, 1028
BseYI CCCAGC 2 cut(s) 983, 1183
Bsh1236I CGCG 5 cut(s) 176, 909, 1034, 1133, 1144
BshFI GGCC 3 cut(s) 48, 620, 1267
BshNI GGYRCC 1 cut(s) 1156
BsiHKAI GWGCWC 1 cut(s) 1490
BsiHKCI CYCGRG 2 cut(s) 90, 532
BsiSI CCGG 4 cut(s) 719, 728, 1126, 1253
BslFI GGGAC 4 cut(s) 515, 747, 928, 1518
BsmAI GTCTC 4 cut(s) 93, 227, 320, 1207
BsmBI CGTCTC 1 cut(s) 1207
BsmFI GGGAC 4 cut(s) 515, 747, 928, 1518
BsmI GAATGC 1 cut(s) 984
BsnI GGCC 3 cut(s) 48, 620, 1267
Bso31I GGTCTC 1 cut(s) 320
BsoBI CYCGRG 2 cut(s) 90, 532
Bsp119I TTCGAA 1 cut(s) 782
Bsp1286I GDGCHC 1 cut(s) 1490
Bsp13I TCCGGA 1 cut(s) 1125
Bsp19I CCATGG 1 cut(s) 1101
Bsp68I TCGCGA 1 cut(s) 1133
BspACI CCGC 6 cut(s) 176, 372, 907, 1034, 1142, 1160
BspANI GGCC 3 cut(s) 48, 620, 1267
BspCNI CTCAG 2 cut(s) 155, 708
BspEI TCCGGA 1 cut(s) 1125
BspFNI CGCG 5 cut(s) 176, 909, 1034, 1133, 1144
BspLI GGNNCC 6 cut(s) 405, 531, 735, 736, 944, 1158
BspPI GGATC 5 cut(s) 206, 706, 1114, 1117, 1136
BspQI GCTCTTC 1 cut(s) 746
BspT104I TTCGAA 1 cut(s) 782
BspT107I GGYRCC 1 cut(s) 1156
BspTNI GGTCTC 1 cut(s) 320
BsrDI GCAATG 1 cut(s) 1060
BsrFI RCCGGY 1 cut(s) 1252
BsrI ACTGG 2 cut(s) 349, 1361
BssAI RCCGGY 1 cut(s) 1252
BssECI CCNNGG 3 cut(s) 37, 1101, 1326
BssNI GRCGYC 1 cut(s) 1157
BssSI CACGAG 1 cut(s) 53
BssT1I CCWWGG 1 cut(s) 1101
Bst2BI CACGAG 1 cut(s) 53
Bst2UI CCWGG 2 cut(s) 39, 890
Bst4CI ACNGT 3 cut(s) 64, 115, 1211
Bst6I CTCTTC 4 cut(s) 110, 187, 746, 1427
BstACI GRCGYC 1 cut(s) 1157
BstBAI YACGTR 1 cut(s) 1263
BstBI TTCGAA 1 cut(s) 782
BstC8I GCNNGC 3 cut(s) 555, 681, 907
BstDEI CTNAG 4 cut(s) 142, 572, 695, 1174
BstDSI CCRYGG 2 cut(s) 1101, 1326
BstF5I GGATG 3 cut(s) 32, 1360, 1483
BstFNI CGCG 5 cut(s) 176, 909, 1034, 1133, 1144
BstH2I RGCGCY 3 cut(s) 252, 435, 1160
BstHHI GCGC 4 cut(s) 251, 434, 911, 1159
BstMAI GTCTC 4 cut(s) 93, 227, 320, 1207
BstMWI GCNNNNNNNGC 8 cut(s) 147, 676, 793, 864, 873, 1050, 1175, 1184
BstNI CCWGG 2 cut(s) 39, 890
BstNSI RCATGY 3 cut(s) 364, 418, 683
BstSCI CCNGG 2 cut(s) 37, 888
BstSFI CTRYAG 1 cut(s) 843
BstUI CGCG 5 cut(s) 176, 909, 1034, 1133, 1144
BstV1I GCAGC 2 cut(s) 544, 1028
BstV2I GAAGAC 1 cut(s) 891
BstX2I RGATCY 1 cut(s) 711
BstXI CCANNNNNNTGG 1 cut(s) 1102
BstYI RGATCY 1 cut(s) 711
BsuI GTATCC 1 cut(s) 735
BsuRI GGCC 3 cut(s) 48, 620, 1267
BtgI CCRYGG 2 cut(s) 1101, 1326
BtgZI GCGATG 1 cut(s) 771
BtrI CACGTC 1 cut(s) 426
BtsCI GGATG 3 cut(s) 32, 1360, 1483
BtsIMutI CAGTG 4 cut(s) 150, 342, 886, 1207
BtuMI TCGCGA 1 cut(s) 1133
Cac8I GCNNGC 3 cut(s) 555, 681, 907
CfoI GCGC 4 cut(s) 251, 434, 911, 1159
Cfr10I RCCGGY 1 cut(s) 1252
Cfr13I GGNCC 4 cut(s) 529, 734, 942, 1358
CsiI ACCWGGT 1 cut(s) 888
Csp6I GTAC 1 cut(s) 369
CviAII CATG 8 cut(s) 361, 415, 439, 451, 680, 868, 920, 1102
CviQI GTAC 1 cut(s) 369
DdeI CTNAG 4 cut(s) 142, 572, 695, 1174
DinI GGCGCC 1 cut(s) 1158
DraIII CACNNNGTG 2 cut(s) 55, 473
EaeI YGGCCR 2 cut(s) 46, 618
Eam1104I CTCTTC 4 cut(s) 110, 187, 746, 1427
EarI CTCTTC 4 cut(s) 110, 187, 746, 1427
Eco130I CCWWGG 1 cut(s) 1101
Eco31I GGTCTC 1 cut(s) 320
Eco32I GATATC 1 cut(s) 808
Eco47I GGWCC 4 cut(s) 529, 734, 942, 1358
Eco57I CTGAAG 1 cut(s) 862
Eco72I CACGTG 1 cut(s) 1263
Eco88I CYCGRG 2 cut(s) 90, 532
EcoO109I RGGNCCY 1 cut(s) 734
EcoRI GAATTC 1 cut(s) 1219
EcoRII CCWGG 2 cut(s) 37, 888
EcoRV GATATC 1 cut(s) 808
EcoT14I CCWWGG 1 cut(s) 1101
EcoT22I ATGCAT 1 cut(s) 1297
EgeI GGCGCC 1 cut(s) 1158
EheI GGCGCC 1 cut(s) 1158
ErhI CCWWGG 1 cut(s) 1101
Esp3I CGTCTC 1 cut(s) 1207
FaeI CATG 8 cut(s) 364, 418, 442, 454, 683, 871, 923, 1105
FaqI GGGAC 4 cut(s) 515, 747, 928, 1518
FatI CATG 8 cut(s) 360, 414, 438, 450, 679, 867, 919, 1101
FauI CCCGC 2 cut(s) 914, 1149
FbaI TGATCA 3 cut(s) 97, 826, 1516
Fnu4HI GCNGC 3 cut(s) 558, 1042, 1160
FokI GGATG 3 cut(s) 19, 1367, 1490
Fsp4HI GCNGC 3 cut(s) 558, 1042, 1160
FspBI CTAG 5 cut(s) 20, 443, 561, 1304, 1316
GlaI GCGC 4 cut(s) 250, 433, 910, 1158
GluI GCNGC 3 cut(s) 558, 1042, 1160
GsaI CCCAGC 2 cut(s) 987, 1187
GsuI CTGGAG 2 cut(s) 692, 1250
HaeII RGCGCY 3 cut(s) 252, 435, 1160
HaeIII GGCC 3 cut(s) 48, 620, 1267
HapII CCGG 4 cut(s) 719, 728, 1126, 1253
HhaI GCGC 4 cut(s) 251, 434, 911, 1159
Hin1I GRCGYC 1 cut(s) 1157
Hin1II CATG 8 cut(s) 364, 418, 442, 454, 683, 871, 923, 1105
Hin6I GCGC 4 cut(s) 249, 432, 909, 1157
HinP1I GCGC 4 cut(s) 249, 432, 909, 1157
HindIII AAGCTT 2 cut(s) 874, 1467
HpaII CCGG 4 cut(s) 719, 728, 1126, 1253
HphI GGTGA 5 cut(s) 103, 298, 760, 904, 1450
Hpy188I TCNGA 7 cut(s) 145, 198, 325, 703, 711, 805, 1193
Hpy99I CGWCG 3 cut(s) 64, 386, 841
HpyAV CCTTC 4 cut(s) 181, 470, 695, 1345
HpyCH4III ACNGT 3 cut(s) 64, 115, 1211
HpyCH4IV ACGT 6 cut(s) 162, 291, 384, 425, 949, 1262
HpyCH4V TGCA 2 cut(s) 495, 1295
HpyF10VI GCNNNNNNNGC 8 cut(s) 147, 676, 793, 864, 873, 1050, 1175, 1184
HpyF3I CTNAG 4 cut(s) 142, 572, 695, 1174
HpySE526I ACGT 6 cut(s) 162, 291, 384, 425, 949, 1262
Hsp92I GRCGYC 1 cut(s) 1157
Hsp92II CATG 8 cut(s) 364, 418, 442, 454, 683, 871, 923, 1105
HspAI GCGC 4 cut(s) 249, 432, 909, 1157
KasI GGCGCC 1 cut(s) 1156
KflI GGGWCCC 1 cut(s) 734
Kpn2I TCCGGA 1 cut(s) 1125
Ksp22I TGATCA 3 cut(s) 97, 826, 1516
LguI GCTCTTC 1 cut(s) 746
LmnI GCTCC 4 cut(s) 84, 864, 916, 1411
Lsp1109I GCAGC 2 cut(s) 544, 1028
LweI GCATC 1 cut(s) 145
MabI ACCWGGT 1 cut(s) 888
MaeI CTAG 5 cut(s) 20, 443, 561, 1304, 1316
MaeII ACGT 6 cut(s) 162, 291, 384, 425, 949, 1262
MaeIII GTNAC 6 cut(s) 304, 453, 536, 1011, 1021, 1369
MboII GAAGA 6 cut(s) 97, 174, 601, 763, 896, 1444
MflI RGATCY 1 cut(s) 711
MhlI GDGCHC 1 cut(s) 1490
MlsI TGGCCA 2 cut(s) 48, 620
MluCI AATT 5 cut(s) 395, 1219, 1332, 1383, 1521
MluNI TGGCCA 2 cut(s) 48, 620
Mly113I GGCGCC 1 cut(s) 1157
MlyI GAGTC 9 cut(s) 173, 176, 328, 329, 333, 503, 573, 683, 1079
MmeI TCCRAC 3 cut(s) 564, 567, 1171
Mox20I TGGCCA 2 cut(s) 48, 620
Mph1103I ATGCAT 1 cut(s) 1297
MroI TCCGGA 1 cut(s) 1125
MscI TGGCCA 2 cut(s) 48, 620
MseI TTAA 2 cut(s) 294, 1525
MslI CAYNNNNRTG 2 cut(s) 359, 1007
Msp20I TGGCCA 2 cut(s) 48, 620
MspA1I CMGCKG 1 cut(s) 557
MspI CCGG 4 cut(s) 719, 728, 1126, 1253
MspR9I CCNGG 2 cut(s) 39, 890
Mva1269I GAATGC 1 cut(s) 984
MvaI CCWGG 2 cut(s) 39, 890
MvnI CGCG 5 cut(s) 176, 909, 1034, 1133, 1144
MwoI GCNNNNNNNGC 8 cut(s) 147, 676, 793, 864, 873, 1050, 1175, 1184
NarI GGCGCC 1 cut(s) 1157
NcoI CCATGG 1 cut(s) 1101
NlaIII CATG 8 cut(s) 364, 418, 442, 454, 683, 871, 923, 1105
NlaIV GGNNCC 6 cut(s) 405, 531, 735, 736, 944, 1158
NmeAIII GCCGAG 1 cut(s) 1303
NmuCI GTSAC 3 cut(s) 304, 1021, 1369
NruI TCGCGA 1 cut(s) 1133
NsiI ATGCAT 1 cut(s) 1297
NspI RCATGY 3 cut(s) 364, 418, 683
NspV TTCGAA 1 cut(s) 782
OliI CACNNNNGTG 1 cut(s) 1007
PaeI GCATGC 1 cut(s) 683
PaeR7I CTCGAG 1 cut(s) 90
PciI ACATGT 2 cut(s) 360, 414
PciSI GCTCTTC 1 cut(s) 746
PcsI WCGNNNNNNNCGW 3 cut(s) 390, 788, 1197
PctI GAATGC 1 cut(s) 984
PfeI GAWTC 1 cut(s) 779
PflMI CCANNNNNTGG 2 cut(s) 44, 55
PkrI GCNGC 3 cut(s) 559, 1043, 1161
PleI GAGTC 9 cut(s) 173, 175, 328, 328, 333, 503, 572, 682, 1078
PluTI GGCGCC 1 cut(s) 1160
PmaCI CACGTG 1 cut(s) 1263
PmlI CACGTG 1 cut(s) 1263
PpsI GAGTC 9 cut(s) 173, 175, 328, 328, 333, 503, 572, 682, 1078
Ppu21I YACGTR 1 cut(s) 1263
PpuMI RGGWCCY 1 cut(s) 734
PscI ACATGT 2 cut(s) 360, 414
Psp1406I AACGTT 1 cut(s) 291
Psp5II RGGWCCY 1 cut(s) 734
Psp6I CCWGG 2 cut(s) 37, 888
PspCI CACGTG 1 cut(s) 1263
PspFI CCCAGC 2 cut(s) 983, 1183
PspGI CCWGG 2 cut(s) 37, 888
PspN4I GGNNCC 6 cut(s) 405, 531, 735, 736, 944, 1158
PspPI GGNCC 4 cut(s) 529, 734, 942, 1358
PspPPI RGGWCCY 1 cut(s) 734
PsuI RGATCY 1 cut(s) 711
PvuII CAGCTG 1 cut(s) 557
RruI TCGCGA 1 cut(s) 1133
RsaI GTAC 1 cut(s) 370
RsaNI GTAC 1 cut(s) 369
RseI CAYNNNNRTG 2 cut(s) 359, 1007
SapI GCTCTTC 1 cut(s) 746
SaqAI TTAA 2 cut(s) 294, 1525
SatI GCNGC 3 cut(s) 558, 1042, 1160
Sau96I GGNCC 4 cut(s) 529, 734, 942, 1358
SchI GAGTC 9 cut(s) 173, 176, 328, 329, 333, 503, 573, 683, 1079
ScrFI CCNGG 2 cut(s) 39, 890
SduI GDGCHC 1 cut(s) 1490
SexAI ACCWGGT 1 cut(s) 888
SfaNI GCATC 1 cut(s) 145
SfcI CTRYAG 1 cut(s) 843
SfoI GGCGCC 1 cut(s) 1158
Sfr274I CTCGAG 1 cut(s) 90
SfuI TTCGAA 1 cut(s) 782
SinI GGWCC 4 cut(s) 529, 734, 942, 1358
SlaI CTCGAG 1 cut(s) 90
SmiMI CAYNNNNRTG 2 cut(s) 359, 1007
SmlI CTYRAG 2 cut(s) 90, 743
SmoI CTYRAG 2 cut(s) 90, 743
SphI GCATGC 1 cut(s) 683
Sse9I AATT 5 cut(s) 395, 1219, 1332, 1383, 1521
SsiI CCGC 6 cut(s) 176, 372, 907, 1034, 1142, 1160
SspDI GGCGCC 1 cut(s) 1156
SspMI CTAG 5 cut(s) 20, 443, 561, 1304, 1316
StyD4I CCNGG 2 cut(s) 37, 888
StyI CCWWGG 1 cut(s) 1101
TaaI ACNGT 3 cut(s) 64, 115, 1211
TaiI ACGT 6 cut(s) 165, 294, 387, 428, 952, 1265
TaqI TCGA 9 cut(s) 91, 318, 337, 357, 381, 512, 782, 791, 822
TasI AATT 5 cut(s) 395, 1219, 1332, 1383, 1521
TauI GCSGC 1 cut(s) 1162
TfiI GAWTC 1 cut(s) 779
Tru1I TTAA 2 cut(s) 294, 1525
Tru9I TTAA 2 cut(s) 294, 1525
TscAI CASTG 4 cut(s) 157, 349, 886, 1214
TseFI GTSAC 3 cut(s) 304, 1021, 1369
TseI GCWGC 2 cut(s) 557, 1041
Tsp45I GTSAC 3 cut(s) 304, 1021, 1369
TspDTI ATGAA 4 cut(s) 17, 97, 196, 259
TspGWI ACGGA 1 cut(s) 825
TspRI CASTG 4 cut(s) 157, 349, 886, 1214
Van91I CCANNNNNTGG 2 cut(s) 44, 55
VpaK11BI GGWCC 4 cut(s) 529, 734, 942, 1358
XapI RAATTY 2 cut(s) 1219, 1521
XceI RCATGY 3 cut(s) 364, 418, 683
XhoI CTCGAG 1 cut(s) 90
XspI CTAG 5 cut(s) 20, 443, 561, 1304, 1316
Zsp2I ATGCAT 1 cut(s) 1297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.