Rorug02G0489800

Wound-induced protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000303
Physical Location & Seq
Forward (+)
61885894 .. 61887466
1573 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0489800.1

Sequence Viewer

Length: 1413 bp
ATGAAGGAACCTAGAGAGTTGGTCTTCATCACAGCCCCAGGTATTGGCCATCTCGTACCAACCGTCGAGATTGCAAAGCTCCTCGTTGATCGAGATGACCAAATTTTCGTCACAATTCTCATAATGAAGTTTCCCTTTGACGACTCCAACCCCAAAGGTTCTGAAGAAGACTACTACTCCTCCATTTCACCGCGCATCAAGTTCATGAGCCTCCCAGAGCTCAACATAGACACAAAAGGAATGGGACCTTCCGCCTTCTTCAAAATATTTGTTGAAAATCAGAAACCGAACGTTACAGACGTGGTCACCAAACTCACCGAGTCTCAGTCCGAGTCCAAGCCTCGACTCGCCGGTTTTGTCATTGACATGTTCTGCACTACCATGATCGATGTGGCCAATGAATTTGGGGTTCCTACTTACGTTTTCTTCACGTCCAACGCAGCATGTCTTGGGTTCTTTCTACACCTCCAAGCCATTTGTGATGAGGAAAACAAGGACGTTTCCGAGTACTTGGAGTCGGGGGCCGATTTGTCTCTGCCGAGTTTTATCAATCCGCTGCCTCATGGAGTTTTGACTAGTGTTTTTCCAGACAAGGAGGGCGCCCATGCATTCCTCAACCATGCAAGAAGGTTTAGAGAAACCAAGGGTATTTTGGTAAACACGTTCTTGGAGTTGGAGTCACATGCTTTGCACTCTCTTTCCGATGGTAAAGTCCCGCCGGTGTACCCCGTGGGGCCCTTACTGAACTTGAAAAATGATGATGACCAACCGAAGTCCGATATCTTGGAGTGGCTTGAGGATCAGCCTCCCCTATCTGTAGTGTTCCTGTGCTTCGGGAGCATGGGAAGTTTTGCTGAGGATCAGGTGAAAGAGATAGCGTGTGCGTTGGAGCAGAGTGGATATCGGTTCTTGTGGTCCCTACGTCAGCCCCCACCAAAGGGTAAGATAGCTTTCCCAAGCGATTACGTAGATGCCAAGGCAGTCTTGCCTGAAGGATTTCTGGATCGGACGGCTGGGATCGGAAAAACTATAGGTTGGGCACCACAAATTGATATCTTGGCCCACCCTTCGATCGGAGGGTTTGTATCCCATTGCGGATGGAACTCTACGCTTGAGAGTCTGTGGTATGGTGTACCGATTGCCACGTGGCCAATGTACGCTGAACAACAGTTGAATGCCTTTGGGCTGGTGAAGGAATTGGGATTGGCCGTGGAAGTTGACGTGAACTATCGAAAAGATGGTCAAGTGGTTTTGAGTGCACAAGTCATAGAGAAAGGGATAAGGCAAGTGATGGAGCAGGATAGTGATATAAGGAATAAGGTAAAAGAGACGAGTGAAAAGAGCAAGAAAGCTTTAATGGGTGGGTCATCACACTCTTCATTAGGTCACTTTATTGATCAGATAATTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3774

Protein Analysis

470

Amino Acids

52.09

Weight (kDa)

5.0

Isoelectric Point (pI)

42.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 271 - 409 1.8e-22 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000303)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G10265 AT4G10270
fragaria_vesca FvH4_3g21130 FvH4_6g44460 FvH4_6g44461 FvH4_6g44470
malus_domestica MD03G1217500.v1.1 MD09G1096800.v1.1 MD09G1096900.v1.1 MD09G1097000.v1.1 MD09G1097100.v1.1 MD11G1235200.v1.1 MD11G1235300.v1.1 MD17G1085100.v1.1 MD17G1085200.v1.1 MD17G1085300.v1.1 MD17G1085400.v1.1
prunus_persica Prupe.3G228900_v2.0.a1 Prupe.3G229000_v2.0.a1 Prupe.3G229300_v2.0.a1 Prupe.3G229400_v2.0.a1 Prupe.3G229500_v2.0.a1 Prupe.3G229700_v2.0.a1 Prupe.3G229800_v2.0.a1 Prupe.3G229900_v2.0.a1 Prupe.3G230000_v2.0.a1 Prupe.4G191800_v2.0.a1
pyrus_communis pycom03g16710 pycom09g02120 pycom09g02130 pycom1049g00030 pycom11g20680 pycom11g20690 pycom17g08250 pycom17g08260 pycom17g08270 pycom17g08280 pycom17g08290 pycom17g08310
rosa_chinensis RchiOBHm_Chr2g0161421 RchiOBHm_Chr2g0161441 RchiOBHm_Chr2g0161451 RchiOBHm_Chr2g0161461 RchiOBHm_Chr2g0161481 RchiOBHm_Chr2g0161491 RchiOBHm_Chr2g0161501 RchiOBHm_Chr2g0161511 RchiOBHm_Chr5g0036191
rosa_laevigata RLG00000021284 RLG00000021289
rosa_multiflora Rmu_co8259543.1_g000001 Rmu_sc0000247.1_g000003 Rmu_sc0003548.1_g000005 Rmu_sc0003548.1_g000011 Rmu_sc0003548.1_g000014 Rmu_sc0003548.1_g000015 Rmu_sc0003548.1_g000016 Rmu_sc0003548.1_g000017 Rmu_sc0006100.1_g000003 Rmu_sc0013925.1_g000002 Rmu_sc0013925.1_g000003 Rmu_sc0018798.1_g000001 Rmu_sc0040460.1_g000004
rosa_roxburghii Rroxscaffold_1G00044570 Rroxscaffold_2G00088730 Rroxscaffold_2G00088740 Rroxscaffold_2G00088750 Rroxscaffold_2G00088760 Rroxscaffold_2G00088770 Rroxscaffold_2G00088780 Rroxscaffold_2G00088800 Rroxscaffold_2G00088810 Rroxscaffold_2G00088830
rosa_rugosa Rorug02G0489400 Rorug02G0489800 Rorug02G0489900 Rorug02G0490000 Rorug02G0490100 Rorug02G0490200 Rorug02G0490300 Rorug05G0153500
rosa_samantha Rh2AG555700 Rh2AG555900 Rh2AG556100 Rh2AG556200 Rh2AG556300 Rh2AG556400 Rh2AG556500 Rh2BG568900 Rh2BG569100 Rh2BG569200 Rh2BG569400 Rh2BG569600 Rh2BG569700 Rh2BG569800 Rh2BG569900 Rh2CG539600 Rh2CG539800 Rh2CG540200 Rh2CG540300 Rh2CG540400 Rh2DG578500 Rh2DG578700 Rh2DG578800 Rh2DG579000 Rh2DG579100 Rh2DG579200 Rh2DG579300 Rh5BG248200 Rh5CG279600 Rh5DG256500
rosa_wichuraiana Rw2G045960 Rw2G045980 Rw2G046000 Rw2G046010 Rw2G046020 Rw2G046030 Rw2G046040 Rw5G022710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 599, 1039
AccB7I CCANNNNNTGG 1 cut(s) 44
AccII CGCG 1 cut(s) 193
AciI CCGC 5 cut(s) 191, 252, 554, 716, 1095
AclI AACGTT 1 cut(s) 291
AclWI GGATC 4 cut(s) 807, 867, 1011, 1025
AcoI YGGCCR 4 cut(s) 46, 393, 1148, 1206
AcsI RAATTY 2 cut(s) 102, 401
AcuI CTGAAG 2 cut(s) 183, 1011
AcvI CACGTG 1 cut(s) 1146
AcyI GRCGYC 1 cut(s) 600
AfaI GTAC 5 cut(s) 57, 509, 725, 1134, 1157
AfiI CCNNNNNNNGG 4 cut(s) 44, 937, 938, 1073
AflIII ACRYGT 2 cut(s) 366, 660
AgsI TTSAA 4 cut(s) 262, 275, 751, 1174
AhlI ACTAGT 1 cut(s) 575
AjiI CACGTC 3 cut(s) 301, 432, 1222
AjnI CCWGG 1 cut(s) 37
AluBI AGCT 4 cut(s) 79, 220, 950, 1352
AluI AGCT 4 cut(s) 79, 220, 950, 1352
Alw21I GWGCWC 2 cut(s) 222, 1261
Alw26I GTCTC 3 cut(s) 327, 537, 1322
Alw44I GTGCAC 1 cut(s) 1257
AlwI GGATC 4 cut(s) 807, 867, 1011, 1025
AoxI GGCC 7 cut(s) 46, 393, 522, 734, 1059, 1148, 1206
ApaI GGGCCC 1 cut(s) 738
ApaLI GTGCAC 1 cut(s) 1257
ApeKI GCWGC 2 cut(s) 440, 556
ApoI RAATTY 2 cut(s) 102, 401
ArsI GACNNNNNNTTYG 4 cut(s) 89, 121, 1225, 1257
Asp700I GAANNNNTTC 1 cut(s) 996
AspLEI GCGC 2 cut(s) 195, 602
AspS9I GGNCC 6 cut(s) 245, 522, 734, 735, 915, 1060
AsuHPI GGTGA 5 cut(s) 180, 298, 307, 877, 1201
AvaII GGWCC 2 cut(s) 245, 915
BaeGI GKGCMC 3 cut(s) 738, 1042, 1261
BalI TGGCCA 3 cut(s) 48, 395, 1150
BanI GGYRCC 2 cut(s) 599, 1039
BanII GRGCYC 2 cut(s) 222, 738
BbrPI CACGTG 1 cut(s) 1146
BbsI GAAGAC 2 cut(s) 16, 174
Bbv12I GWGCWC 2 cut(s) 222, 1261
BbvCI CCTCAGC 1 cut(s) 855
BbvI GCAGC 2 cut(s) 452, 543
BccI CCATC 5 cut(s) 57, 698, 1092, 1232, 1285
BceAI ACGGC 2 cut(s) 1026, 1193
BciT130I CCWGG 1 cut(s) 39
BciVI GTATCC 1 cut(s) 1096
BclI TGATCA 1 cut(s) 1396
BcoDI GTCTC 3 cut(s) 327, 537, 1322
BcuI ACTAGT 1 cut(s) 575
BfaI CTAG 2 cut(s) 12, 576
BfmI CTRYAG 2 cut(s) 816, 1029
BfoI RGCGCY 1 cut(s) 603
BfuI GTATCC 1 cut(s) 1096
BisI GCNGC 2 cut(s) 441, 557
BlsI GCNGC 2 cut(s) 442, 558
BmcAI AGTACT 1 cut(s) 509
Bme1390I CCNGG 1 cut(s) 39
Bme18I GGWCC 2 cut(s) 245, 915
BmgBI CACGTC 3 cut(s) 301, 432, 1222
BmgT120I GGNCC 6 cut(s) 245, 522, 734, 735, 915, 1060
BmiI GGNNCC 9 cut(s) 9, 246, 411, 523, 601, 735, 736, 917, 1041
BmrFI CCNGG 1 cut(s) 39
BmsI GCATC 2 cut(s) 204, 961
BpiI GAAGAC 2 cut(s) 16, 174
Bpu10I CCTNAGC 1 cut(s) 855
BpuEI CTTGAG 2 cut(s) 815, 1133
Bsa29I ATCGAT 1 cut(s) 387
BsaAI YACGTR 2 cut(s) 967, 1146
BsaHI GRCGYC 1 cut(s) 600
BsaJI CCNNGG 5 cut(s) 37, 642, 729, 975, 1209
BsaXI ACNNNNNCTCC 8 cut(s) 161, 164, 191, 194, 662, 692, 1068, 1098
Bsc4I CCNNNNNNNGG 4 cut(s) 44, 937, 938, 1073
Bse118I RCCGGY 2 cut(s) 350, 718
Bse3DI GCAATG 1 cut(s) 1090
BseBI CCWGG 1 cut(s) 39
BseCI ATCGAT 1 cut(s) 387
BseDI CCNNGG 5 cut(s) 37, 642, 729, 975, 1209
BseGI GGATG 1 cut(s) 1103
BseLI CCNNNNNNNGG 4 cut(s) 44, 937, 938, 1073
BseMI GCAATG 1 cut(s) 1090
BseMII CTCAG 2 cut(s) 338, 846
BseRI GAGGAG 2 cut(s) 71, 169
BseSI GKGCMC 3 cut(s) 738, 1042, 1261
BseXI GCAGC 2 cut(s) 452, 543
BseYI CCCAGC 1 cut(s) 1013
BsgI GTGCAG 1 cut(s) 358
Bsh1236I CGCG 1 cut(s) 193
Bsh1285I CGRYCG 1 cut(s) 1074
BshFI GGCC 7 cut(s) 48, 395, 524, 736, 1061, 1150, 1208
BshNI GGYRCC 2 cut(s) 599, 1039
BshVI ATCGAT 1 cut(s) 387
BsiEI CGRYCG 1 cut(s) 1074
BsiHKAI GWGCWC 2 cut(s) 222, 1261
BsiSI CCGG 2 cut(s) 351, 719
BslFI GGGAC 3 cut(s) 258, 698, 901
BslI CCNNNNNNNGG 4 cut(s) 44, 937, 938, 1073
BsmAI GTCTC 3 cut(s) 327, 537, 1322
BsmBI CGTCTC 1 cut(s) 1322
BsmFI GGGAC 3 cut(s) 258, 698, 901
BsmI GAATGC 2 cut(s) 608, 1180
BsnI GGCC 7 cut(s) 48, 395, 524, 736, 1061, 1150, 1208
Bsp120I GGGCCC 1 cut(s) 734
Bsp1286I GDGCHC 4 cut(s) 222, 738, 1042, 1261
Bsp143I GATC 8 cut(s) 88, 384, 799, 859, 1003, 1017, 1071, 1396
BspACI CCGC 5 cut(s) 191, 252, 554, 716, 1095
BspANI GGCC 7 cut(s) 48, 395, 524, 736, 1061, 1150, 1208
BspCNI CTCAG 2 cut(s) 337, 847
BspDI ATCGAT 1 cut(s) 387
BspFNI CGCG 1 cut(s) 193
BspHI TCATGA 1 cut(s) 204
BspLI GGNNCC 9 cut(s) 9, 246, 411, 523, 601, 735, 736, 917, 1041
BspPI GGATC 4 cut(s) 807, 867, 1011, 1025
BspT107I GGYRCC 2 cut(s) 599, 1039
BsrDI GCAATG 1 cut(s) 1090
BsrFI RCCGGY 2 cut(s) 350, 718
BssAI RCCGGY 2 cut(s) 350, 718
BssECI CCNNGG 5 cut(s) 37, 642, 729, 975, 1209
BssMI GATC 8 cut(s) 88, 384, 799, 859, 1003, 1017, 1071, 1396
BssNI GRCGYC 1 cut(s) 600
BssT1I CCWWGG 2 cut(s) 642, 975
Bst2UI CCWGG 1 cut(s) 39
Bst4CI ACNGT 2 cut(s) 64, 1170
Bst6I CTCTTC 1 cut(s) 1381
BstACI GRCGYC 1 cut(s) 600
BstBAI YACGTR 2 cut(s) 967, 1146
BstDEI CTNAG 2 cut(s) 324, 855
BstDSI CCRYGG 2 cut(s) 729, 1209
BstEII GGTNACC 1 cut(s) 304
BstF5I GGATG 1 cut(s) 1103
BstFNI CGCG 1 cut(s) 193
BstH2I RGCGCY 1 cut(s) 603
BstHHI GCGC 2 cut(s) 195, 602
BstKTI GATC 8 cut(s) 91, 387, 802, 862, 1006, 1020, 1074, 1399
BstMAI GTCTC 3 cut(s) 327, 537, 1322
BstMBI GATC 8 cut(s) 88, 384, 799, 859, 1003, 1017, 1071, 1396
BstMCI CGRYCG 1 cut(s) 1074
BstMWI GCNNNNNNNGC 1 cut(s) 837
BstNI CCWGG 1 cut(s) 39
BstNSI RCATGY 3 cut(s) 370, 447, 686
BstPI GGTNACC 1 cut(s) 304
BstSCI CCNGG 1 cut(s) 37
BstSFI CTRYAG 2 cut(s) 816, 1029
BstSLI GKGCMC 3 cut(s) 738, 1042, 1261
BstSNI TACGTA 1 cut(s) 967
BstUI CGCG 1 cut(s) 193
BstV1I GCAGC 2 cut(s) 452, 543
BstV2I GAAGAC 2 cut(s) 16, 174
Bsu15I ATCGAT 1 cut(s) 387
BsuI GTATCC 1 cut(s) 1096
BsuRI GGCC 7 cut(s) 48, 395, 524, 736, 1061, 1150, 1208
BsuTUI ATCGAT 1 cut(s) 387
BtgI CCRYGG 2 cut(s) 729, 1209
BtrI CACGTC 3 cut(s) 301, 432, 1222
BtsCI GGATG 1 cut(s) 1103
CciI TCATGA 1 cut(s) 204
CfoI GCGC 2 cut(s) 195, 602
Cfr10I RCCGGY 2 cut(s) 350, 718
Cfr13I GGNCC 6 cut(s) 245, 522, 734, 735, 915, 1060
ClaI ATCGAT 1 cut(s) 387
Csp6I GTAC 5 cut(s) 56, 508, 724, 1133, 1156
CviAII CATG 9 cut(s) 205, 367, 382, 444, 563, 605, 620, 683, 841
CviQI GTAC 5 cut(s) 56, 508, 724, 1133, 1156
DdeI CTNAG 2 cut(s) 324, 855
DinI GGCGCC 1 cut(s) 601
DpnI GATC 8 cut(s) 90, 386, 801, 861, 1005, 1019, 1073, 1398
DpnII GATC 8 cut(s) 88, 384, 799, 859, 1003, 1017, 1071, 1396
EaeI YGGCCR 4 cut(s) 46, 393, 1148, 1206
Eam1104I CTCTTC 1 cut(s) 1381
EarI CTCTTC 1 cut(s) 1381
EciI GGCGGA 1 cut(s) 241
Ecl136II GAGCTC 1 cut(s) 220
Eco105I TACGTA 1 cut(s) 967
Eco130I CCWWGG 2 cut(s) 642, 975
Eco24I GRGCYC 2 cut(s) 222, 738
Eco32I GATATC 3 cut(s) 781, 902, 1054
Eco47I GGWCC 2 cut(s) 245, 915
Eco53kI GAGCTC 1 cut(s) 220
Eco57I CTGAAG 2 cut(s) 183, 1011
Eco72I CACGTG 1 cut(s) 1146
Eco91I GGTNACC 1 cut(s) 304
EcoICRI GAGCTC 1 cut(s) 220
EcoO109I RGGNCCY 3 cut(s) 245, 734, 735
EcoO65I GGTNACC 1 cut(s) 304
EcoRII CCWGG 1 cut(s) 37
EcoRV GATATC 3 cut(s) 781, 902, 1054
EcoT14I CCWWGG 2 cut(s) 642, 975
EcoT22I ATGCAT 1 cut(s) 610
EcoT38I GRGCYC 2 cut(s) 222, 738
EgeI GGCGCC 1 cut(s) 601
EheI GGCGCC 1 cut(s) 601
ErhI CCWWGG 2 cut(s) 642, 975
Esp3I CGTCTC 1 cut(s) 1322
FaeI CATG 9 cut(s) 208, 370, 385, 447, 566, 608, 623, 686, 844
FalI AAGNNNNNCTT 4 cut(s) 119, 151, 968, 1000
FaqI GGGAC 3 cut(s) 258, 698, 901
FatI CATG 9 cut(s) 204, 366, 381, 443, 562, 604, 619, 682, 840
FauI CCCGC 1 cut(s) 723
FbaI TGATCA 1 cut(s) 1396
Fnu4HI GCNGC 2 cut(s) 441, 557
FokI GGATG 1 cut(s) 1110
FriOI GRGCYC 2 cut(s) 222, 738
Fsp4HI GCNGC 2 cut(s) 441, 557
FspBI CTAG 2 cut(s) 12, 576
GlaI GCGC 2 cut(s) 194, 601
GluI GCNGC 2 cut(s) 441, 557
GsaI CCCAGC 1 cut(s) 1017
HaeII RGCGCY 1 cut(s) 603
HaeIII GGCC 7 cut(s) 48, 395, 524, 736, 1061, 1150, 1208
HapII CCGG 2 cut(s) 351, 719
HhaI GCGC 2 cut(s) 195, 602
Hin1I GRCGYC 1 cut(s) 600
Hin1II CATG 9 cut(s) 208, 370, 385, 447, 566, 608, 623, 686, 844
Hin6I GCGC 2 cut(s) 193, 600
HinP1I GCGC 2 cut(s) 193, 600
HincII GTYRAC 1 cut(s) 1219
HindII GTYRAC 1 cut(s) 1219
HindIII AAGCTT 1 cut(s) 1350
HinfI GANTC 7 cut(s) 143, 320, 332, 345, 515, 677, 1117
HpaII CCGG 2 cut(s) 351, 719
HphI GGTGA 5 cut(s) 180, 298, 307, 877, 1201
Hpy166II GTNNAC 6 cut(s) 658, 724, 1133, 1219, 1225, 1259
Hpy188III TCNNGA 6 cut(s) 67, 92, 205, 587, 835, 1001
Hpy8I GTNNAC 6 cut(s) 658, 724, 1133, 1219, 1225, 1259
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 6 cut(s) 258, 265, 621, 986, 1077, 1186
HpyCH4III ACNGT 2 cut(s) 64, 1170
HpyCH4V TGCA 6 cut(s) 74, 375, 608, 623, 691, 1259
HpyF10VI GCNNNNNNNGC 1 cut(s) 837
HpyF3I CTNAG 2 cut(s) 324, 855
Hsp92I GRCGYC 1 cut(s) 600
Hsp92II CATG 9 cut(s) 208, 370, 385, 447, 566, 608, 623, 686, 844
HspAI GCGC 2 cut(s) 193, 600
KasI GGCGCC 1 cut(s) 599
Ksp22I TGATCA 1 cut(s) 1396
Kzo9I GATC 8 cut(s) 88, 384, 799, 859, 1003, 1017, 1071, 1396
LmnI GCTCC 4 cut(s) 84, 837, 889, 1294
Lsp1109I GCAGC 2 cut(s) 452, 543
LweI GCATC 2 cut(s) 204, 961
MaeI CTAG 2 cut(s) 12, 576
MaeIII GTNAC 5 cut(s) 109, 292, 304, 678, 1385
MalI GATC 8 cut(s) 90, 386, 801, 861, 1005, 1019, 1073, 1398
MboI GATC 8 cut(s) 88, 384, 799, 859, 1003, 1017, 1071, 1396
MboII GAAGA 6 cut(s) 16, 176, 179, 250, 418, 1368
MhlI GDGCHC 4 cut(s) 222, 738, 1042, 1261
MlsI TGGCCA 3 cut(s) 48, 395, 1150
MluCI AATT 6 cut(s) 102, 114, 401, 1047, 1196, 1404
MluNI TGGCCA 3 cut(s) 48, 395, 1150
Mly113I GGCGCC 1 cut(s) 600
MlyI GAGTC 7 cut(s) 137, 329, 339, 341, 524, 686, 1126
MmeI TCCRAC 4 cut(s) 171, 459, 654, 867
Mox20I TGGCCA 3 cut(s) 48, 395, 1150
Mph1103I ATGCAT 1 cut(s) 610
MroXI GAANNNNTTC 1 cut(s) 996
MscI TGGCCA 3 cut(s) 48, 395, 1150
MseI TTAA 2 cut(s) 1355, 1411
MslI CAYNNNNRTG 2 cut(s) 365, 380
Msp20I TGGCCA 3 cut(s) 48, 395, 1150
MspA1I CMGCKG 1 cut(s) 556
MspI CCGG 2 cut(s) 351, 719
MspR9I CCNGG 1 cut(s) 39
Mva1269I GAATGC 2 cut(s) 608, 1180
MvaI CCWGG 1 cut(s) 39
MvnI CGCG 1 cut(s) 193
MwoI GCNNNNNNNGC 1 cut(s) 837
NarI GGCGCC 1 cut(s) 600
NdeII GATC 8 cut(s) 88, 384, 799, 859, 1003, 1017, 1071, 1396
NlaIII CATG 9 cut(s) 208, 370, 385, 447, 566, 608, 623, 686, 844
NlaIV GGNNCC 9 cut(s) 9, 246, 411, 523, 601, 735, 736, 917, 1041
NmeAIII GCCGAG 1 cut(s) 564
NmuCI GTSAC 4 cut(s) 109, 304, 678, 1385
NsiI ATGCAT 1 cut(s) 610
NspI RCATGY 3 cut(s) 370, 447, 686
PagI TCATGA 1 cut(s) 204
PciI ACATGT 1 cut(s) 366
PcsI WCGNNNNNNNCGW 2 cut(s) 60, 297
PctI GAATGC 2 cut(s) 608, 1180
PdmI GAANNNNTTC 1 cut(s) 996
PflFI GACNNNGTC 1 cut(s) 302
PflMI CCANNNNNTGG 1 cut(s) 44
PkrI GCNGC 2 cut(s) 442, 558
Ple19I CGATCG 1 cut(s) 1074
PleI GAGTC 7 cut(s) 137, 328, 339, 340, 523, 685, 1125
PluTI GGCGCC 1 cut(s) 603
PmaCI CACGTG 1 cut(s) 1146
PmlI CACGTG 1 cut(s) 1146
PpsI GAGTC 7 cut(s) 137, 328, 339, 340, 523, 685, 1125
Ppu21I YACGTR 2 cut(s) 967, 1146
PpuMI RGGWCCY 1 cut(s) 245
PscI ACATGT 1 cut(s) 366
Psp124BI GAGCTC 1 cut(s) 222
Psp1406I AACGTT 1 cut(s) 291
Psp5II RGGWCCY 1 cut(s) 245
Psp6I CCWGG 1 cut(s) 37
PspCI CACGTG 1 cut(s) 1146
PspEI GGTNACC 1 cut(s) 304
PspFI CCCAGC 1 cut(s) 1013
PspGI CCWGG 1 cut(s) 37
PspN4I GGNNCC 9 cut(s) 9, 246, 411, 523, 601, 735, 736, 917, 1041
PspOMI GGGCCC 1 cut(s) 734
PspPI GGNCC 6 cut(s) 245, 522, 734, 735, 915, 1060
PspPPI RGGWCCY 1 cut(s) 245
PsyI GACNNNGTC 1 cut(s) 302
PvuI CGATCG 1 cut(s) 1074
RsaI GTAC 5 cut(s) 57, 509, 725, 1134, 1157
RsaNI GTAC 5 cut(s) 56, 508, 724, 1133, 1156
RseI CAYNNNNRTG 2 cut(s) 365, 380
SacI GAGCTC 1 cut(s) 222
SaqAI TTAA 2 cut(s) 1355, 1411
SatI GCNGC 2 cut(s) 441, 557
Sau3AI GATC 8 cut(s) 88, 384, 799, 859, 1003, 1017, 1071, 1396
Sau96I GGNCC 6 cut(s) 245, 522, 734, 735, 915, 1060
ScaI AGTACT 1 cut(s) 509
SchI GAGTC 7 cut(s) 137, 329, 339, 341, 524, 686, 1126
ScrFI CCNGG 1 cut(s) 39
SduI GDGCHC 4 cut(s) 222, 738, 1042, 1261
SfaNI GCATC 2 cut(s) 204, 961
SfcI CTRYAG 2 cut(s) 816, 1029
SfoI GGCGCC 1 cut(s) 601
SgrAI CRCCGGYG 1 cut(s) 718
SinI GGWCC 2 cut(s) 245, 915
SmiMI CAYNNNNRTG 2 cut(s) 365, 380
SmlI CTYRAG 2 cut(s) 794, 1112
SmoI CTYRAG 2 cut(s) 794, 1112
SnaBI TACGTA 1 cut(s) 967
SpeI ACTAGT 1 cut(s) 575
Sse9I AATT 6 cut(s) 102, 114, 401, 1047, 1196, 1404
SsiI CCGC 5 cut(s) 191, 252, 554, 716, 1095
SspDI GGCGCC 1 cut(s) 599
SspI AATATT 1 cut(s) 267
SspMI CTAG 2 cut(s) 12, 576
SstI GAGCTC 1 cut(s) 222
StyD4I CCNGG 1 cut(s) 37
StyI CCWWGG 2 cut(s) 642, 975
TaaI ACNGT 2 cut(s) 64, 1170
TaqI TCGA 6 cut(s) 66, 91, 343, 387, 1070, 1231
TasI AATT 6 cut(s) 102, 114, 401, 1047, 1196, 1404
TatI WGTACW 1 cut(s) 507
Tru1I TTAA 2 cut(s) 1355, 1411
Tru9I TTAA 2 cut(s) 1355, 1411
TseFI GTSAC 4 cut(s) 109, 304, 678, 1385
TseI GCWGC 2 cut(s) 440, 556
Tsp45I GTSAC 4 cut(s) 109, 304, 678, 1385
TspDTI ATGAA 6 cut(s) 16, 17, 140, 193, 414, 1368
Tth111I GACNNNGTC 1 cut(s) 302
Van91I CCANNNNNTGG 1 cut(s) 44
VneI GTGCAC 1 cut(s) 1257
VpaK11BI GGWCC 2 cut(s) 245, 915
XapI RAATTY 2 cut(s) 102, 401
XceI RCATGY 3 cut(s) 370, 447, 686
XcmI CCANNNNNNNNNTGG 2 cut(s) 388, 649
XmnI GAANNNNTTC 1 cut(s) 996
XspI CTAG 2 cut(s) 12, 576
ZrmI AGTACT 1 cut(s) 509
Zsp2I ATGCAT 1 cut(s) 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.