Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002162

Physical Location & Seq

Genomic Coordinates Reverse (-)

16491922 .. 16495752

Gene Structure 3831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0189200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

ATGTGGATCTTACAATATCTAGTGCTAGTATTGGTATCCAGTACTTGTGTTGTAGCTACATTGGCTCAAGGAACAAACGAGGATGGTTCTGGCGTTAGGAAGCCTTACATTGTGTACATGGGAGAACTGCCGGAACCCGGATCCTCCACCATGGTCATGACCACAGCCGGCCATGATAACTTGCTCAAGACAGCAATTGGAGATGCCGACTTAGCCAGAGTATCCAAAATTTATACTTATGGAAGGAGCTTCAACGGCTTCGTAGCCAGATTGTTGCCGCATGAAGCAAAGAAACTATCAGATGATGATCGGGTTGTTTCAGTGTTTCCAAACACCAAGCTCAAATTACATACAACAAGGTCATGGGATTTCCTAGGATTGCCAGGAAATACGAAGAAACGAAACTTGCCAATAGAGAGCAAGATCGTAGTGGGTGTGATAGATACAGGAATTTGGCCGGCTTGTCCCAGTATGAACGATTCAGGCTTCGGACCACCCCCAAGAAAATGGAAAGGAAAATGTATGAAGGGCGGTAACTTCACCGGCTGTAACAACAAGGTAATTGGTGCCAAATACTTCATGGTGGACGACATGCCCGGCCCTGGTTACGAGGACAACGCTAGTCCAGTTGACACTGATGGCCATGGCACTCACACAGCCTCCATTGTTGGTGGTGTACCCGTCCGAGGCGCTAGCCTATATGGCATTGCAAAAGGGACTGCTCGTGGGGGAGTGCCATCGTCACGTATAGCCACGTACAAAGCATGCTGGACTGGTGGCTGCGGTGACATGAACATCTTGGCCGCGTTTGATGAAGCCATTGCTGATGGTGTGGACTTGATATCAATCTCCGTTGGCGGTCCTTCACGGAATTTCCTCCAGGATTCCATTGCTCTCGGATCGTTTCATGCCATGAAGAGAGGGATTTTGGTTTCAGCCTCAGCTGGGAATGATGGACCTTATGCATCCTCTGTTCAGAATGTTGCACCATGGATAATGACTGTGGCTGCTACTGGCCTTGATAGGCGGTTAAAGACTCTAGTTAAGTTGGGCAATGGCAAGAAAATTTCTGGAAATTCAATCAATACCTTCACCCCCAAGAAACAGATGTATCCCCTTACAAGTGGAGCCCGTGCTTCCAACGTTACTTCAGACCTCTACGGAAATGCAAGTGCTTGTGACATTGGGACTTTAAACCCTCAGAAGGTGAAGGGAAGGATTGTGTTGTGCAAAGGGCAAAGTAATCAGGATCCAACTATTAAAGACTTAAATGGGGCAGGAACTATAATGACAGAAGATGAAATGCTTGATTACGGTTACACCCCTATCATCCCAGCTACCTATGTGCTTGTTAATGATGGAATTAAGATTGAGCGGTATATAAACACTACCAAGAACCCTACGGCTGTAATACAGCGGACAAGAACTGTTCATATGGATGCCCCCTTCATTGCTTCTTTCTCTTCGAGAGGACCTCAACTCATAACCCCCAACATCCTCAAGCCTGATCTTGCTGCACCAGGGATAAACATACTAGCTGCATATTCGAAGCTGCCATCTTTAACAGGTAGCCTAGAAGATATGCGCCACTATTCGTTCAACATACTCTCAGGTACATCCATGTCTTGCCCTCATGCAACTGCCTCAGCAGCCTATGTCAAGTCCTTCCACCCAGACTGGTCCCCGGCTGCCATCAAGTCGGCTCTCATGACAACCGCCACACCATTGAAAATCAAACCCCTGGAAGGCGAGTTAGCCTTCGGAGCAGGACAAATACAGCCAATAAAGGCAGTGCATCCTGGCCTAGTCTACGACATTTCCATGAACGACTACATCAGCTTCTTGTGCAAGGAAGGCTACAACAGCACCAGCATTGGAAAGCTTATTGGTGGTAAAAAGAAGTACAACTGCTCAGCTTTTAAACCCGCACCCGGCACCGATGGCCTCAACTATCCTTCAATGTCCTACCTGGTGCGAAATCCGAATTCTAGCATTTCAGCTGTTTTCCTTAGATCGGTGAAGCATGTAGGGTACGGTAAGTCGGTGTACAAGGCAAAGGTGACTTCGCCAAAGGGCCTTTCCATTAGAGTCACCCCGAGTACCTTGACATTCACTAAGAAGCATCAGAAGCGATCCTTCACGGTTGTGGTGAAGGGTGGCACGATGAAAGGAAAGGCAGAGAGTCTGTCTGCTCTACTAGAGTGGGATGATGGTAGGCATAGGGTTAGGAGCCCCATCGTAGTCTACAGGCATACCACATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

754

Amino Acids

80.7

Weight (kDa)

9.54

Isoelectric Point (pI)

31.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	36 - 117	1.3e-14	Peptidase inhibitor I9
Peptidase_S8	PF00082	140 - 588	1.1e-45	Subtilase family
fn3_6	PF17766	649 - 748	1.3e-25	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002162)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr4g0400881 RchiOBHm_Chr7g0184531
rosa_laevigata	RLG00000003471 RLG00000004354 RLG00000005258 RLG00000008932 RLG00000009611 RLG00000011994 RLG00000014557 RLG00000020955 RLG00000023365 RLG00000032471
rosa_multiflora	Rmu_sc0003322.1_g000015 Rmu_sc0005690.1_g000014
rosa_roxburghii	Rroxscaffold_2G00151140 Rroxscaffold_4G00310150 Rroxscaffold_6G00393640
rosa_rugosa	Rorug03G0118800 Rorug03G0189200 Rorug03G0357400 Rorug07G0128400
rosa_samantha	Rh2AG289100 Rh2AG289200 Rh2BG207400 Rh2CG330800 Rh3AG046600 Rh3CG047700 Rh3DG048600 Rh4CG349400 Rh6AG101800 Rh6AG101900 Rh6DG085300 Rh7AG034700 Rh7AG034800 Rh7AG068700 Rh7AG079400 Rh7AG220200 Rh7BG139700 Rh7BG216200 Rh7BG348800 Rh7CG068300 Rh7CG489100 Rh7DG035000 Rh7DG457600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	566, 1934
AccBSI	CCGCTC	1 cut(s)	1375
AccI	GTMKAC	2 cut(s)	1809, 2244
AccII	CGCG	1 cut(s)	806
AclI	AACGTT	1 cut(s)	1143
AclWI	GGATC	7 cut(s)	14, 135, 148, 907, 1244, 1257, 2127
AcoI	YGGCCR	4 cut(s)	169, 455, 640, 801
AcsI	RAATTY	6 cut(s)	228, 450, 871, 1065, 1075, 1984
AcuI	CTGAAG	1 cut(s)	1134
AfaI	GTAC	9 cut(s)	43, 116, 678, 758, 1615, 1904, 2033, 2048, 2101
AfiI	CCNNNNNNNGG	8 cut(s)	137, 602, 686, 945, 1204, 1745, 1931, 2014
AgsI	TTSAA	5 cut(s)	253, 1080, 1600, 1729, 1959
AjnI	CCWGG	7 cut(s)	382, 601, 879, 1519, 1740, 1798, 1968
AjuI	GAANNNNNNNTTGG	2 cut(s)	2062, 2094
AleI	CACNNNNGTG	1 cut(s)	2144
AlwI	GGATC	7 cut(s)	14, 135, 148, 907, 1244, 1257, 2127
Ama87I	CYCGRG	1 cut(s)	2095
AoxI	GGCC	9 cut(s)	169, 455, 598, 640, 801, 1015, 1801, 1942, 2074
ApeKI	GCWGC	7 cut(s)	780, 1007, 1514, 1538, 1552, 1649, 1688
ApoI	RAATTY	6 cut(s)	228, 450, 871, 1065, 1075, 1984
AspA2I	CCTAGG	1 cut(s)	373
AspLEI	GCGC	2 cut(s)	692, 1587
AspS9I	GGNCC	7 cut(s)	491, 599, 860, 956, 1472, 1680, 2074
AsuC2I	CCSGG	4 cut(s)	138, 597, 1685, 1932
AsuHPI	GGTGA	8 cut(s)	532, 797, 1084, 1219, 2029, 2071, 2083, 2161
AsuII	TTCGAA	1 cut(s)	1547
AsuNHI	GCTAGC	1 cut(s)	692
AvaI	CYCGRG	1 cut(s)	2095
AvaII	GGWCC	5 cut(s)	491, 860, 956, 1472, 1680
AvrII	CCTAGG	1 cut(s)	373
BaeI	ACNNNNGTAYC	2 cut(s)	1094, 1127
BalI	TGGCCA	1 cut(s)	642
BamHI	GGATCC	2 cut(s)	140, 1249
BanI	GGYRCC	2 cut(s)	566, 1934
BanII	GRGCYC	2 cut(s)	1132, 2234
BauI	CACGAG	1 cut(s)	723
BbvCI	CCTCAGC	2 cut(s)	940, 1645
BbvI	GCAGC	7 cut(s)	767, 994, 1501, 1525, 1539, 1661, 1675
BceAI	ACGGC	2 cut(s)	271, 1419
BciT130I	CCWGG	7 cut(s)	384, 603, 881, 1521, 1742, 1800, 1970
BciVI	GTATCC	3 cut(s)	46, 232, 1122
BcnI	CCSGG	4 cut(s)	138, 597, 1685, 1932
BfmI	CTRYAG	1 cut(s)	2245
BfoI	RGCGCY	1 cut(s)	693
BfuI	GTATCC	3 cut(s)	46, 232, 1122
BglI	GCCNNNNNGGC	1 cut(s)	702
BisI	GCNGC	9 cut(s)	278, 781, 804, 1008, 1515, 1539, 1553, 1650, 1689
BlnI	CCTAGG	1 cut(s)	373
BlpI	GCTNAGC	1 cut(s)	1912
BlsI	GCNGC	9 cut(s)	279, 782, 805, 1009, 1516, 1540, 1554, 1651, 1690
BmcAI	AGTACT	1 cut(s)	43
Bme18I	GGWCC	5 cut(s)	491, 860, 956, 1472, 1680
BmeT110I	CYCGRG	1 cut(s)	2095
BmgT120I	GGNCC	7 cut(s)	491, 599, 860, 956, 1472, 1680, 2074
BmiI	GGNNCC	8 cut(s)	135, 142, 568, 1129, 1251, 1682, 1936, 2231
BmrI	ACTGGG	1 cut(s)	462
BmsI	GCATC	5 cut(s)	193, 974, 1429, 1804, 2131
BmtI	GCTAGC	1 cut(s)	696
BmuI	ACTGGG	1 cut(s)	462
BplI	GAGNNNNNCTC	2 cut(s)	1459, 1491
BpmI	CTGGAG	1 cut(s)	863
Bpu10I	CCTNAGC	2 cut(s)	940, 1645
Bpu1102I	GCTNAGC	1 cut(s)	1912
Bpu14I	TTCGAA	1 cut(s)	1547
BpuEI	CTTGAG	3 cut(s)	51, 170, 1484
BpuMI	CCSGG	4 cut(s)	138, 597, 1685, 1932
BsaAI	YACGTR	2 cut(s)	746, 756
BsaBI	GATNNNNATC	2 cut(s)	306, 845
BsaJI	CCNNGG	9 cut(s)	150, 373, 601, 643, 685, 989, 1520, 1683, 1740
BsaXI	ACNNNNNCTCC	2 cut(s)	644, 674
Bsc4I	CCNNNNNNNGG	8 cut(s)	137, 602, 686, 945, 1204, 1745, 1931, 2014
Bse118I	RCCGGY	3 cut(s)	167, 457, 542
Bse1I	ACTGG	6 cut(s)	39, 468, 626, 778, 1018, 1682
Bse3DI	GCAATG	5 cut(s)	705, 819, 888, 1060, 1449
Bse8I	GATNNNNATC	2 cut(s)	306, 845
BseBI	CCWGG	7 cut(s)	384, 603, 881, 1521, 1742, 1800, 1970
BseDI	CCNNGG	9 cut(s)	150, 373, 601, 643, 685, 989, 1520, 1683, 1740
BseGI	GGATG	8 cut(s)	88, 965, 1329, 1444, 1494, 1616, 1795, 2212
BseJI	GATNNNNATC	2 cut(s)	306, 845
BseLI	CCNNNNNNNGG	8 cut(s)	137, 602, 686, 945, 1204, 1745, 1931, 2014
BseMI	GCAATG	5 cut(s)	705, 819, 888, 1060, 1449
BseMII	CTCAG	5 cut(s)	954, 1214, 1623, 1659, 1926
BseNI	ACTGG	6 cut(s)	39, 468, 626, 778, 1018, 1682
BseXI	GCAGC	7 cut(s)	767, 994, 1501, 1525, 1539, 1661, 1675
BseYI	CCCAGC	2 cut(s)	944, 1333
BsgI	GTGCAG	1 cut(s)	1500
Bsh1236I	CGCG	1 cut(s)	806
BshFI	GGCC	9 cut(s)	171, 457, 600, 642, 803, 1017, 1803, 1944, 2076
BshNI	GGYRCC	2 cut(s)	566, 1934
BsiHKCI	CYCGRG	1 cut(s)	2095
BsiSI	CCGG	8 cut(s)	131, 138, 168, 458, 543, 597, 1685, 1932
BslFI	GGGAC	4 cut(s)	450, 730, 1201, 1666
BslI	CCNNNNNNNGG	8 cut(s)	137, 602, 686, 945, 1204, 1745, 1931, 2014
BsmFI	GGGAC	4 cut(s)	450, 730, 1201, 1666
BsnI	GGCC	9 cut(s)	171, 457, 600, 642, 803, 1017, 1803, 1944, 2076
BsoBI	CYCGRG	1 cut(s)	2095
Bsp119I	TTCGAA	1 cut(s)	1547
Bsp1286I	GDGCHC	2 cut(s)	1132, 2234
Bsp1407I	TGTACA	2 cut(s)	114, 2046
Bsp143I	GATC	9 cut(s)	6, 140, 307, 423, 899, 1249, 1507, 2012, 2132
Bsp1720I	GCTNAGC	1 cut(s)	1912
Bsp19I	CCATGG	3 cut(s)	150, 643, 989
BspANI	GGCC	9 cut(s)	171, 457, 600, 642, 803, 1017, 1803, 1944, 2076
BspCNI	CTCAG	5 cut(s)	953, 1213, 1622, 1658, 1925
BspFNI	CGCG	1 cut(s)	806
BspHI	TCATGA	2 cut(s)	156, 1707
BspLI	GGNNCC	8 cut(s)	135, 142, 568, 1129, 1251, 1682, 1936, 2231
BspOI	GCTAGC	1 cut(s)	696
BspPI	GGATC	7 cut(s)	14, 135, 148, 907, 1244, 1257, 2127
BspT104I	TTCGAA	1 cut(s)	1547
BspT107I	GGYRCC	2 cut(s)	566, 1934
BsrBI	CCGCTC	1 cut(s)	1375
BsrDI	GCAATG	5 cut(s)	705, 819, 888, 1060, 1449
BsrFI	RCCGGY	3 cut(s)	167, 457, 542
BsrGI	TGTACA	2 cut(s)	114, 2046
BsrI	ACTGG	6 cut(s)	39, 468, 626, 778, 1018, 1682
BssAI	RCCGGY	3 cut(s)	167, 457, 542
BssECI	CCNNGG	9 cut(s)	150, 373, 601, 643, 685, 989, 1520, 1683, 1740
BssMI	GATC	9 cut(s)	6, 140, 307, 423, 899, 1249, 1507, 2012, 2132
BssSI	CACGAG	1 cut(s)	723
BssT1I	CCWWGG	4 cut(s)	150, 373, 643, 989
Bst2BI	CACGAG	1 cut(s)	723
Bst2UI	CCWGG	7 cut(s)	384, 603, 881, 1521, 1742, 1800, 1970
Bst4CI	ACNGT	5 cut(s)	1003, 1316, 1429, 2036, 2143
Bst6I	CTCTTC	2 cut(s)	911, 1468
BstAUI	TGTACA	2 cut(s)	114, 2046
BstBAI	YACGTR	2 cut(s)	746, 756
BstBI	TTCGAA	1 cut(s)	1547
BstC8I	GCNNGC	4 cut(s)	169, 459, 694, 766
BstDEI	CTNAG	8 cut(s)	211, 940, 1200, 1609, 1645, 1912, 2009, 2115
BstDSI	CCRYGG	3 cut(s)	150, 643, 989
BstF5I	GGATG	8 cut(s)	88, 965, 1329, 1444, 1494, 1616, 1795, 2212
BstFNI	CGCG	1 cut(s)	806
BstH2I	RGCGCY	1 cut(s)	693
BstHHI	GCGC	2 cut(s)	692, 1587
BstKTI	GATC	9 cut(s)	9, 143, 310, 426, 902, 1252, 1510, 2015, 2135
BstMBI	GATC	9 cut(s)	6, 140, 307, 423, 899, 1249, 1507, 2012, 2132
BstNI	CCWGG	7 cut(s)	384, 603, 881, 1521, 1742, 1800, 1970
BstNSI	RCATGY	3 cut(s)	595, 768, 2027
BstSFI	CTRYAG	1 cut(s)	2245
BstUI	CGCG	1 cut(s)	806
BstV1I	GCAGC	7 cut(s)	767, 994, 1501, 1525, 1539, 1661, 1675
BstX2I	RGATCY	3 cut(s)	6, 140, 1249
BstXI	CCANNNNNNTGG	1 cut(s)	507
BstYI	RGATCY	3 cut(s)	6, 140, 1249
BsuI	GTATCC	3 cut(s)	46, 232, 1122
BsuRI	GGCC	9 cut(s)	171, 457, 600, 642, 803, 1017, 1803, 1944, 2076
BtgI	CCRYGG	3 cut(s)	150, 643, 989
BtsCI	GGATG	8 cut(s)	88, 965, 1329, 1444, 1494, 1616, 1795, 2212
BtsI	GCAGTG	1 cut(s)	1797
BtsIMutI	CAGTG	3 cut(s)	327, 633, 1797
Cac8I	GCNNGC	4 cut(s)	169, 459, 694, 766
CciI	TCATGA	2 cut(s)	156, 1707
CfoI	GCGC	2 cut(s)	692, 1587
Cfr10I	RCCGGY	3 cut(s)	167, 457, 542
Cfr13I	GGNCC	7 cut(s)	491, 599, 860, 956, 1472, 1680, 2074
CsiI	ACCWGGT	1 cut(s)	1968
Csp6I	GTAC	9 cut(s)	42, 115, 677, 757, 1614, 1903, 2032, 2047, 2100
CviQI	GTAC	9 cut(s)	42, 115, 677, 757, 1614, 1903, 2032, 2047, 2100
DdeI	CTNAG	8 cut(s)	211, 940, 1200, 1609, 1645, 1912, 2009, 2115
DpnI	GATC	9 cut(s)	8, 142, 309, 425, 901, 1251, 1509, 2014, 2134
DpnII	GATC	9 cut(s)	6, 140, 307, 423, 899, 1249, 1507, 2012, 2132
DraI	TTTAAA	2 cut(s)	1194, 1921
EaeI	YGGCCR	4 cut(s)	169, 455, 640, 801
Eam1104I	CTCTTC	2 cut(s)	911, 1468
EarI	CTCTTC	2 cut(s)	911, 1468
Eco130I	CCWWGG	4 cut(s)	150, 373, 643, 989
Eco24I	GRGCYC	2 cut(s)	1132, 2234
Eco32I	GATATC	1 cut(s)	843
Eco47I	GGWCC	5 cut(s)	491, 860, 956, 1472, 1680
Eco57I	CTGAAG	1 cut(s)	1134
Eco88I	CYCGRG	1 cut(s)	2095
EcoO109I	RGGNCCY	2 cut(s)	1472, 2074
EcoRI	GAATTC	1 cut(s)	1984
EcoRII	CCWGG	7 cut(s)	382, 601, 879, 1519, 1740, 1798, 1968
EcoRV	GATATC	1 cut(s)	843
EcoT14I	CCWWGG	4 cut(s)	150, 373, 643, 989
EcoT22I	ATGCAT	1 cut(s)	967
EcoT38I	GRGCYC	2 cut(s)	1132, 2234
ErhI	CCWWGG	4 cut(s)	150, 373, 643, 989
FalI	AAGNNNNNCTT	2 cut(s)	2120, 2152
FaqI	GGGAC	4 cut(s)	450, 730, 1201, 1666
FauI	CCCGC	1 cut(s)	1933
FauNDI	CATATG	1 cut(s)	1434
FblI	GTMKAC	2 cut(s)	1809, 2244
Fnu4HI	GCNGC	9 cut(s)	278, 781, 804, 1008, 1515, 1539, 1553, 1650, 1689
FokI	GGATG	8 cut(s)	95, 952, 1316, 1451, 1481, 1603, 1782, 2219
FriOI	GRGCYC	2 cut(s)	1132, 2234
Fsp4HI	GCNGC	9 cut(s)	278, 781, 804, 1008, 1515, 1539, 1553, 1650, 1689
GlaI	GCGC	2 cut(s)	691, 1586
GluI	GCNGC	9 cut(s)	278, 781, 804, 1008, 1515, 1539, 1553, 1650, 1689
GsaI	CCCAGC	2 cut(s)	948, 1337
GsuI	CTGGAG	1 cut(s)	863
HaeII	RGCGCY	1 cut(s)	693
HaeIII	GGCC	9 cut(s)	171, 457, 600, 642, 803, 1017, 1803, 1944, 2076
HapII	CCGG	8 cut(s)	131, 138, 168, 458, 543, 597, 1685, 1932
HhaI	GCGC	2 cut(s)	692, 1587
Hin6I	GCGC	2 cut(s)	690, 1585
HinP1I	GCGC	2 cut(s)	690, 1585
HincII	GTYRAC	1 cut(s)	631
HindII	GTYRAC	1 cut(s)	631
HindIII	AAGCTT	1 cut(s)	1880
HinfI	GANTC	5 cut(s)	479, 884, 1036, 2088, 2182
HpaII	CCGG	8 cut(s)	131, 138, 168, 458, 543, 597, 1685, 1932
HphI	GGTGA	8 cut(s)	532, 797, 1084, 1219, 2029, 2071, 2083, 2161
Hpy166II	GTNNAC	8 cut(s)	115, 586, 631, 677, 835, 1810, 2047, 2245
Hpy188III	TCNNGA	6 cut(s)	157, 187, 1071, 1247, 1467, 1708
Hpy8I	GTNNAC	8 cut(s)	115, 586, 631, 677, 835, 1810, 2047, 2245
HpyCH4III	ACNGT	5 cut(s)	1003, 1316, 1429, 2036, 2143
HpyCH4IV	ACGT	3 cut(s)	745, 755, 1143
HpyF3I	CTNAG	8 cut(s)	211, 940, 1200, 1609, 1645, 1912, 2009, 2115
HpySE526I	ACGT	3 cut(s)	745, 755, 1143
HspAI	GCGC	2 cut(s)	690, 1585
KroI	GCCGGC	2 cut(s)	167, 457
KroNI	GCCGGC	2 cut(s)	169, 459
Kzo9I	GATC	9 cut(s)	6, 140, 307, 423, 899, 1249, 1507, 2012, 2132
LmnI	GCTCC	4 cut(s)	246, 1127, 1763, 2229
Lsp1109I	GCAGC	7 cut(s)	767, 994, 1501, 1525, 1539, 1661, 1675
LweI	GCATC	5 cut(s)	193, 974, 1429, 1804, 2131
MabI	ACCWGGT	1 cut(s)	1968
MaeII	ACGT	3 cut(s)	745, 755, 1143
MalI	GATC	9 cut(s)	8, 142, 309, 425, 901, 1251, 1509, 2014, 2134
MbiI	CCGCTC	1 cut(s)	1375
MboI	GATC	9 cut(s)	6, 140, 307, 423, 899, 1249, 1507, 2012, 2132
MboII	GAAGA	5 cut(s)	406, 928, 1307, 1455, 1589
MfeI	CAATTG	1 cut(s)	195
MflI	RGATCY	3 cut(s)	6, 140, 1249
MhlI	GDGCHC	2 cut(s)	1132, 2234
MlsI	TGGCCA	1 cut(s)	642
MluNI	TGGCCA	1 cut(s)	642
MlyI	GAGTC	3 cut(s)	1030, 2097, 2191
MmeI	TCCRAC	2 cut(s)	1164, 1277
Mox20I	TGGCCA	1 cut(s)	642
Mph1103I	ATGCAT	1 cut(s)	967
MroNI	GCCGGC	2 cut(s)	167, 457
MscI	TGGCCA	1 cut(s)	642
MseI	TTAA	9 cut(s)	1031, 1044, 1193, 1260, 1268, 1353, 1365, 1562, 1920
MslI	CAYNNNNRTG	4 cut(s)	155, 1437, 1820, 2144
Msp20I	TGGCCA	1 cut(s)	642
MspA1I	CMGCKG	3 cut(s)	944, 1417, 2000
MspI	CCGG	8 cut(s)	131, 138, 168, 458, 543, 597, 1685, 1932
MunI	CAATTG	1 cut(s)	195
MvaI	CCWGG	7 cut(s)	384, 603, 881, 1521, 1742, 1800, 1970
MvnI	CGCG	1 cut(s)	806
NaeI	GCCGGC	2 cut(s)	169, 459
NciI	CCSGG	4 cut(s)	138, 597, 1685, 1932
NcoI	CCATGG	3 cut(s)	150, 643, 989
NdeI	CATATG	1 cut(s)	1434
NdeII	GATC	9 cut(s)	6, 140, 307, 423, 899, 1249, 1507, 2012, 2132
NgoMIV	GCCGGC	2 cut(s)	167, 457
NheI	GCTAGC	1 cut(s)	692
NlaIV	GGNNCC	8 cut(s)	135, 142, 568, 1129, 1251, 1682, 1936, 2231
NmuCI	GTSAC	5 cut(s)	741, 785, 1178, 2059, 2089
NsiI	ATGCAT	1 cut(s)	967
NspI	RCATGY	3 cut(s)	595, 768, 2027
NspV	TTCGAA	1 cut(s)	1547
OliI	CACNNNNGTG	1 cut(s)	2144
PaeI	GCATGC	1 cut(s)	768
PagI	TCATGA	2 cut(s)	156, 1707
PdiI	GCCGGC	2 cut(s)	169, 459
PfeI	GAWTC	2 cut(s)	479, 884
PfoI	TCCNGGA	1 cut(s)	879
PkrI	GCNGC	9 cut(s)	279, 782, 805, 1009, 1516, 1540, 1554, 1651, 1690
PleI	GAGTC	3 cut(s)	1030, 2096, 2190
PpsI	GAGTC	3 cut(s)	1030, 2096, 2190
Ppu21I	YACGTR	2 cut(s)	746, 756
PpuMI	RGGWCCY	1 cut(s)	1472
Psp1406I	AACGTT	1 cut(s)	1143
Psp5II	RGGWCCY	1 cut(s)	1472
Psp6I	CCWGG	7 cut(s)	382, 601, 879, 1519, 1740, 1798, 1968
PspFI	CCCAGC	2 cut(s)	944, 1333
PspGI	CCWGG	7 cut(s)	382, 601, 879, 1519, 1740, 1798, 1968
PspN4I	GGNNCC	8 cut(s)	135, 142, 568, 1129, 1251, 1682, 1936, 2231
PspPI	GGNCC	7 cut(s)	491, 599, 860, 956, 1472, 1680, 2074
PspPPI	RGGWCCY	1 cut(s)	1472
PsuI	RGATCY	3 cut(s)	6, 140, 1249
PvuII	CAGCTG	2 cut(s)	944, 2000
RsaI	GTAC	9 cut(s)	43, 116, 678, 758, 1615, 1904, 2033, 2048, 2101
RsaNI	GTAC	9 cut(s)	42, 115, 677, 757, 1614, 1903, 2032, 2047, 2100
RseI	CAYNNNNRTG	4 cut(s)	155, 1437, 1820, 2144
SaqAI	TTAA	9 cut(s)	1031, 1044, 1193, 1260, 1268, 1353, 1365, 1562, 1920
SatI	GCNGC	9 cut(s)	278, 781, 804, 1008, 1515, 1539, 1553, 1650, 1689
Sau3AI	GATC	9 cut(s)	6, 140, 307, 423, 899, 1249, 1507, 2012, 2132
Sau96I	GGNCC	7 cut(s)	491, 599, 860, 956, 1472, 1680, 2074
ScaI	AGTACT	1 cut(s)	43
SchI	GAGTC	3 cut(s)	1030, 2097, 2191
SduI	GDGCHC	2 cut(s)	1132, 2234
SexAI	ACCWGGT	1 cut(s)	1968
SfaNI	GCATC	5 cut(s)	193, 974, 1429, 1804, 2131
SfcI	CTRYAG	1 cut(s)	2245
SfuI	TTCGAA	1 cut(s)	1547
SinI	GGWCC	5 cut(s)	491, 860, 956, 1472, 1680
SmiMI	CAYNNNNRTG	4 cut(s)	155, 1437, 1820, 2144
SmlI	CTYRAG	3 cut(s)	66, 185, 1499
SmoI	CTYRAG	3 cut(s)	66, 185, 1499
SphI	GCATGC	1 cut(s)	768
StyI	CCWWGG	4 cut(s)	150, 373, 643, 989
TaaI	ACNGT	5 cut(s)	1003, 1316, 1429, 2036, 2143
TaiI	ACGT	3 cut(s)	748, 758, 1146
TaqI	TCGA	2 cut(s)	1466, 1547
TatI	WGTACW	4 cut(s)	41, 114, 1902, 2046
TauI	GCSGC	2 cut(s)	280, 806
TfiI	GAWTC	2 cut(s)	479, 884
Tru1I	TTAA	9 cut(s)	1031, 1044, 1193, 1260, 1268, 1353, 1365, 1562, 1920
Tru9I	TTAA	9 cut(s)	1031, 1044, 1193, 1260, 1268, 1353, 1365, 1562, 1920
TscAI	CASTG	3 cut(s)	327, 640, 1797
TseFI	GTSAC	5 cut(s)	741, 785, 1178, 2059, 2089
TseI	GCWGC	7 cut(s)	780, 1007, 1514, 1538, 1552, 1649, 1688
Tsp45I	GTSAC	5 cut(s)	741, 785, 1178, 2059, 2089
TspGWI	ACGGA	3 cut(s)	841, 883, 1176
TspRI	CASTG	3 cut(s)	327, 640, 1797
VpaK11BI	GGWCC	5 cut(s)	491, 860, 956, 1472, 1680
XapI	RAATTY	6 cut(s)	228, 450, 871, 1065, 1075, 1984
XceI	RCATGY	3 cut(s)	595, 768, 2027
XcmI	CCANNNNNNNNNTGG	1 cut(s)	577
XmaJI	CCTAGG	1 cut(s)	373
XmiI	GTMKAC	2 cut(s)	1809, 2244
ZrmI	AGTACT	1 cut(s)	43
Zsp2I	ATGCAT	1 cut(s)	967

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.