Rorug07G0068800

Belongs to the thiolase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0001691
Physical Location & Seq
Reverse (-)
5213952 .. 5219676
5725 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0068800.1

Sequence Viewer

Length: 2079 bp
ATGGCGGTGGCAAGCAAAACCAGAAATATGCTTGAGAATCTTGTAAGAGAAGGATCGTTCAAATGGTTGATTGGAAATCGAGGCCCTTTTGATGACGAATTGGAGGAGATGGAGAGGTCTCCTTCAGCCCCAACAAATTGGATACCGGAGCTATCTCCTATTGCAAATGTAGTTGTCCGTAGATGCTCCAAAATCCTTGGTGTTCCTACGACTGAGCTTTGTAAAGGCTTCAGTGCAGAGGCTTCTGAGTCTATAAAGCATCCATCTCGCTATGCAAGGAACTTTTTGGAATATTGCTCGTTCAGAGCTCTCGCTCTGTCAACTCAGGTGACAGGTCATCTGGCTGATAAAAAGTTTCGACGCCTAACATATGATATGATGCTAGCTTGGGAGGCTCCAGCTTCTGACAGCCAACCTTTGCTAAATTTAAATGAGGATTTATCAGTTGGGATAGAGGCTTTCTCTAGAATAGCTCCGTCAGTTCCCATTATTGCAAATGTGATTATCAGCGAAAATCTTTTTGAGGTACTTGCAACATCAACTGGTGGGAGACTTCAGTTCTCCACTTATGACAAGTATCTAAGTGGACTGGAAAGAGCAATAAGAAAAATGAGGACCCAATCAGAGTCATCTCTTCTTTCTGCTGTACGATCATCAAGAGGAGAGAGAATTCTGGAAGTGGATGGAACGGTAACTACACAACCAGTTCTTGAGCATGTGGGAATTTCTACATGGCCTGGACGGTTGATTCTGACAGACCATGCACTTTACTTCGAGGCTCTGCGTGTTGTATCTTATGACAAGGCAAAACGATATGACCTATCAGATGACCTAAAACAGGTTGTGAAACCTGAGTTGACCGGCCCATGGGGTACTAGACTGTTTGACAAGGCAGTCTTTTATAAATCAATTTCATTATCAGAACCAGTTGTGATAGAGTTTCCTGAGCTGAAGGGGCATTCTCGTCGTGATTACTGGCTAGCGATCATAAGAGAGATTTTGTATGTTCACAGGTTTATACATAAATACCAAATCAAGGGGGTCAAACGAGATGAAGCACTATCAAAGGCTGTGCTTGGGATTCTGCGAGTACAAGCCATTCAAGAAATTTCTTCTTCTCCTTTACGCGCTGAGGGTCTTTTAATGTTCAATCTTTGTGACCAATTACCAGGTGGAGACTTGATACTGGAAACTCTTGCAAATATGTCAACCGTAAGTGAATTAAATAGGTCTAACACTTCTAAGTCTGGAGGTGGAATGTATTCGATCTCAGCCTTAGATATGATTTCTAACTTGGGCTTCGCATTTGGAACAAGTTCCAATAATTCGGTTGAGGCTGGTCTTGCTGTGGGTGAGGTAACTGTTGGACAACTGACTTCGCTGGAAAGAGCAGTTAAGGAATCAAAAAACAATTACGAAAAAGTGGCACAAGCACAAGCAACGGTAGATGGAGTCAAAGTGGAAGGCATTGATACGAATGTTGCAGTGATGAAGGAGTTGCTCTTTCCAATGATAGAACTAGGGAAATGGCTTCTTTCTTTGGCATTATGGGAGGATCCACTGAAGTCTCTGGGTTTCTGTGTTGTTTTCACTTACATCATATGCAGGGGATGGCTGAGTTATGCCTTTGCATTGATGCTCGTCTTTATTGCGATCTTCATGATGCTCACCCGGTTTTTTAGCCAAGGAATATCCAATCACGAGGTTAAGGTGTTAGCACCACCACCAATGAACACAATGGAGCAGCTTTTGGCTGTTCAGAATGCAATTTCCCAAGCTGAAGGGATTGTCCAGGATGGGAACATTGTTCTCCTAAAGCTACATGCTTTGTTGCTGTCACTTTTTCCGCAGGCAAGCGAAAAATTTGCAGTGGCTCTTTTAGTGATGGCTTCGACTCTGGCCTTGCTCCCTGGTAAATACATTGTTCTGTTGATCTTCTTGGAAGCGTTTACACGGTATTCACCAATGAGGAAAACTAGCACGGAGAGATGGATGAGAAGATTGCGAGAGTGGTGGTTCAGCGTACCTGCAGCTCCAGTTATACTTGAGAGAGAAAAGGAAGAGAAAAAGAAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003988 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0006950 GO:0006996 GO:0007031 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009062 GO:0009507 GO:0009514 GO:0009536 GO:0009611 GO:0009657 GO:0009694 GO:0009695 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010111 GO:0010646 GO:0010647 GO:0010817 GO:0016020 GO:0016042 GO:0016043 GO:0016053 GO:0016054 GO:0016408 GO:0016740 GO:0016746 GO:0016747 GO:0019395 GO:0019752 GO:0023051 GO:0023056 GO:0030258 GO:0031090 GO:0031974 GO:0031981 GO:0032787 GO:0034440 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044282 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046395 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0055114 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0072329 GO:0072330 GO:0098588 GO:0098805 GO:1901419 GO:1901421 GO:1901575 GO:1901576 GO:1905957 GO:1905959
KEGG Pathways
Metabolic & Signaling
ko00071 ko00280 ko00592 ko01040 ko01100 ko01110 ko01130 ko01212 ko03320 ko04146 map00071 map00280 map00592 map01040 map01100 map01110 map01130 map01212 map03320 map04146
Pfam Domains
Protein Families
Thiolase_C Thiolase_N

Protein Analysis

692

Amino Acids

77.44

Weight (kDa)

8.49

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF639 PF04842 458 - 685 3.4e-83 Plant protein of unknown function (DUF639)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 903
AasI GACNNNNNNGTC 1 cut(s) 893
Acc36I ACCTGC 1 cut(s) 2035
AccII CGCG 1 cut(s) 1128
AciI CCGC 2 cut(s) 5, 1847
AclWI GGATC 3 cut(s) 61, 1550, 1563
AcsI RAATTY 5 cut(s) 424, 669, 723, 1107, 1862
AcuI CTGAAG 6 cut(s) 108, 214, 539, 971, 1583, 1800
AcyI GRCGYC 1 cut(s) 361
AfaI GTAC 5 cut(s) 528, 648, 874, 1092, 2025
AfiI CCNNNNNNNGG 3 cut(s) 838, 867, 1036
AgsI TTSAA 3 cut(s) 61, 1103, 1150
AjnI CCWGG 4 cut(s) 736, 1168, 1791, 1909
Alw21I GWGCWC 1 cut(s) 310
Alw26I GTCTC 4 cut(s) 123, 544, 1170, 1572
AlwI GGATC 3 cut(s) 61, 1550, 1563
AlwNI CAGNNNCTG 1 cut(s) 404
AoxI GGCC 4 cut(s) 82, 734, 862, 1899
ApeKI GCWGC 2 cut(s) 1744, 2030
ApoI RAATTY 5 cut(s) 424, 669, 723, 1107, 1862
Asp700I GAANNNNTTC 2 cut(s) 1261, 1315
AspLEI GCGC 1 cut(s) 1130
AspS9I GGNCC 3 cut(s) 83, 615, 863
AsuC2I CCSGG 1 cut(s) 1672
AsuHPI GGTGA 4 cut(s) 340, 1364, 1660, 1953
AsuNHI GCTAGC 2 cut(s) 382, 979
AvaII GGWCC 1 cut(s) 615
BaeI ACNNNNGTAYC 2 cut(s) 1464, 1497
BamHI GGATCC 1 cut(s) 1555
BanII GRGCYC 1 cut(s) 310
BauI CACGAG 1 cut(s) 1700
Bbv12I GWGCWC 1 cut(s) 310
BbvCI CCTCAGC 1 cut(s) 1131
BbvI GCAGC 2 cut(s) 1756, 2042
BccI CCATC 8 cut(s) 103, 271, 677, 1442, 1605, 1790, 1879, 1983
BcgI CGANNNNNNTGC 6 cut(s) 248, 282, 947, 981, 1847, 1881
BciT130I CCWGG 4 cut(s) 738, 1170, 1793, 1911
BciVI GTATCC 1 cut(s) 135
BcnI CCSGG 1 cut(s) 1672
BcoDI GTCTC 4 cut(s) 123, 544, 1170, 1572
BfaI CTAG 6 cut(s) 383, 465, 876, 980, 1520, 1977
BfmI CTRYAG 1 cut(s) 2028
BfuAI ACCTGC 1 cut(s) 2035
BfuI GTATCC 1 cut(s) 135
BisI GCNGC 2 cut(s) 1745, 2031
BlsI GCNGC 2 cut(s) 1746, 2032
Bme1390I CCNGG 5 cut(s) 738, 1170, 1672, 1793, 1911
Bme18I GGWCC 1 cut(s) 615
BmgT120I GGNCC 3 cut(s) 83, 615, 863
BmiI GGNNCC 3 cut(s) 396, 617, 1557
BmrFI CCNGG 5 cut(s) 738, 1170, 1672, 1793, 1911
BmsI GCATC 5 cut(s) 173, 268, 369, 1626, 1653
BmtI GCTAGC 2 cut(s) 386, 983
BplI GAGNNNNNCTC 2 cut(s) 446, 478
BpmI CTGGAG 3 cut(s) 381, 1269, 2019
Bpu10I CCTNAGC 2 cut(s) 945, 1131
BpuEI CTTGAG 3 cut(s) 53, 731, 2066
BpuMI CCSGG 1 cut(s) 1672
BsaHI GRCGYC 1 cut(s) 361
BsaI GGTCTC 1 cut(s) 123
BsaJI CCNNGG 4 cut(s) 196, 866, 1684, 1909
BsaWI WCCGGW 1 cut(s) 145
BsaXI ACNNNNNCTCC 2 cut(s) 1443, 1473
Bsc4I CCNNNNNNNGG 3 cut(s) 838, 867, 1036
Bse118I RCCGGY 1 cut(s) 860
Bse1I ACTGG 7 cut(s) 547, 594, 704, 926, 980, 1191, 2036
BseBI CCWGG 4 cut(s) 738, 1170, 1793, 1911
BseDI CCNNGG 4 cut(s) 196, 866, 1684, 1909
BseGI GGATG 5 cut(s) 259, 688, 1616, 1801, 1998
BseLI CCNNNNNNNGG 3 cut(s) 838, 867, 1036
BseMII CTCAG 8 cut(s) 204, 237, 338, 843, 936, 1122, 1284, 1607
BseNI ACTGG 7 cut(s) 547, 594, 704, 926, 980, 1191, 2036
BseRI GAGGAG 2 cut(s) 119, 675
BseXI GCAGC 2 cut(s) 1756, 2042
BsgI GTGCAG 1 cut(s) 255
Bsh1236I CGCG 1 cut(s) 1128
BshFI GGCC 4 cut(s) 84, 736, 864, 1901
BsiHKAI GWGCWC 1 cut(s) 310
BsiSI CCGG 3 cut(s) 146, 861, 1672
BslI CCNNNNNNNGG 3 cut(s) 838, 867, 1036
BsmAI GTCTC 4 cut(s) 123, 544, 1170, 1572
BsmI GAATGC 2 cut(s) 958, 1768
BsnI GGCC 4 cut(s) 84, 736, 864, 1901
Bso31I GGTCTC 1 cut(s) 123
Bsp1286I GDGCHC 1 cut(s) 310
Bsp143I GATC 7 cut(s) 53, 650, 984, 1266, 1555, 1653, 1932
Bsp19I CCATGG 1 cut(s) 866
BspACI CCGC 2 cut(s) 5, 1847
BspANI GGCC 4 cut(s) 84, 736, 864, 1901
BspCNI CTCAG 8 cut(s) 205, 238, 337, 844, 937, 1123, 1283, 1608
BspFNI CGCG 1 cut(s) 1128
BspHI TCATGA 1 cut(s) 1659
BspLI GGNNCC 3 cut(s) 396, 617, 1557
BspMAI CTGCAG 1 cut(s) 2032
BspMI ACCTGC 1 cut(s) 2035
BspOI GCTAGC 2 cut(s) 386, 983
BspPI GGATC 3 cut(s) 61, 1550, 1563
BspTNI GGTCTC 1 cut(s) 123
BsrFI RCCGGY 1 cut(s) 860
BsrI ACTGG 7 cut(s) 547, 594, 704, 926, 980, 1191, 2036
BssAI RCCGGY 1 cut(s) 860
BssECI CCNNGG 4 cut(s) 196, 866, 1684, 1909
BssMI GATC 7 cut(s) 53, 650, 984, 1266, 1555, 1653, 1932
BssNI GRCGYC 1 cut(s) 361
BssSI CACGAG 1 cut(s) 1700
BssT1I CCWWGG 3 cut(s) 196, 866, 1684
Bst2BI CACGAG 1 cut(s) 1700
Bst2UI CCWGG 4 cut(s) 738, 1170, 1793, 1911
Bst4CI ACNGT 7 cut(s) 691, 744, 882, 1213, 1363, 1444, 1956
Bst6I CTCTTC 3 cut(s) 639, 2055, 2066
BstACI GRCGYC 1 cut(s) 361
BstC8I GCNNGC 5 cut(s) 13, 384, 981, 1851, 1855
BstDSI CCRYGG 1 cut(s) 866
BstENI CCTNNNNNAGG 1 cut(s) 836
BstF5I GGATG 5 cut(s) 259, 688, 1616, 1801, 1998
BstFNI CGCG 1 cut(s) 1128
BstHHI GCGC 1 cut(s) 1130
BstKTI GATC 7 cut(s) 56, 653, 987, 1269, 1558, 1656, 1935
BstMAI GTCTC 4 cut(s) 123, 544, 1170, 1572
BstMBI GATC 7 cut(s) 53, 650, 984, 1266, 1555, 1653, 1932
BstMWI GCNNNNNNNGC 3 cut(s) 392, 955, 1343
BstNI CCWGG 4 cut(s) 738, 1170, 1793, 1911
BstNSI RCATGY 2 cut(s) 719, 1826
BstSCI CCNGG 5 cut(s) 736, 1168, 1670, 1791, 1909
BstSFI CTRYAG 1 cut(s) 2028
BstUI CGCG 1 cut(s) 1128
BstV1I GCAGC 2 cut(s) 1756, 2042
BstX2I RGATCY 1 cut(s) 1555
BstXI CCANNNNNNTGG 1 cut(s) 138
BstYI RGATCY 1 cut(s) 1555
BsuI GTATCC 1 cut(s) 135
BsuRI GGCC 4 cut(s) 84, 736, 864, 1901
BtgI CCRYGG 1 cut(s) 866
BtsCI GGATG 5 cut(s) 259, 688, 1616, 1801, 1998
BtsI GCAGTG 2 cut(s) 1491, 1875
BtsIMutI CAGTG 4 cut(s) 238, 1491, 1559, 1875
BveI ACCTGC 1 cut(s) 2035
Cac8I GCNNGC 5 cut(s) 13, 384, 981, 1851, 1855
CaiI CAGNNNCTG 1 cut(s) 404
CciI TCATGA 1 cut(s) 1659
CfoI GCGC 1 cut(s) 1130
Cfr10I RCCGGY 1 cut(s) 860
Cfr13I GGNCC 3 cut(s) 83, 615, 863
CseI GACGC 1 cut(s) 369
CsiI ACCWGGT 1 cut(s) 1168
Csp6I GTAC 5 cut(s) 527, 647, 873, 1091, 2024
CviAII CATG 6 cut(s) 716, 732, 761, 867, 1660, 1823
CviQI GTAC 5 cut(s) 527, 647, 873, 1091, 2024
DpnI GATC 7 cut(s) 55, 652, 986, 1268, 1557, 1655, 1934
DpnII GATC 7 cut(s) 53, 650, 984, 1266, 1555, 1653, 1932
DraI TTTAAA 1 cut(s) 429
DrdI GACNNNNNNGTC 1 cut(s) 893
DseDI GACNNNNNNGTC 1 cut(s) 893
Eam1104I CTCTTC 3 cut(s) 639, 2055, 2066
EarI CTCTTC 3 cut(s) 639, 2055, 2066
Ecl136II GAGCTC 1 cut(s) 308
Eco130I CCWWGG 3 cut(s) 196, 866, 1684
Eco24I GRGCYC 1 cut(s) 310
Eco31I GGTCTC 1 cut(s) 123
Eco47I GGWCC 1 cut(s) 615
Eco53kI GAGCTC 1 cut(s) 308
Eco57I CTGAAG 6 cut(s) 108, 214, 539, 971, 1583, 1800
EcoICRI GAGCTC 1 cut(s) 308
EcoNI CCTNNNNNAGG 1 cut(s) 836
EcoO109I RGGNCCY 2 cut(s) 83, 615
EcoRI GAATTC 1 cut(s) 669
EcoRII CCWGG 4 cut(s) 736, 1168, 1791, 1909
EcoT14I CCWWGG 3 cut(s) 196, 866, 1684
EcoT38I GRGCYC 1 cut(s) 310
ErhI CCWWGG 3 cut(s) 196, 866, 1684
FaeI CATG 6 cut(s) 719, 735, 764, 870, 1663, 1826
FalI AAGNNNNNCTT 2 cut(s) 881, 913
FatI CATG 6 cut(s) 715, 731, 760, 866, 1659, 1822
FauNDI CATATG 2 cut(s) 370, 1601
Fnu4HI GCNGC 2 cut(s) 1745, 2031
FokI GGATG 5 cut(s) 246, 695, 1623, 1808, 2005
FriOI GRGCYC 1 cut(s) 310
Fsp4HI GCNGC 2 cut(s) 1745, 2031
FspBI CTAG 6 cut(s) 383, 465, 876, 980, 1520, 1977
GlaI GCGC 1 cut(s) 1129
GluI GCNGC 2 cut(s) 1745, 2031
GsuI CTGGAG 3 cut(s) 381, 1269, 2019
HaeIII GGCC 4 cut(s) 84, 736, 864, 1901
HapII CCGG 3 cut(s) 146, 861, 1672
HgaI GACGC 1 cut(s) 369
HhaI GCGC 1 cut(s) 1130
Hin1I GRCGYC 1 cut(s) 361
Hin1II CATG 6 cut(s) 719, 735, 764, 870, 1663, 1826
Hin6I GCGC 1 cut(s) 1128
HinP1I GCGC 1 cut(s) 1128
HincII GTYRAC 3 cut(s) 321, 858, 1209
HindII GTYRAC 3 cut(s) 321, 858, 1209
HinfI GANTC 8 cut(s) 37, 248, 626, 748, 1081, 1400, 1452, 1894
HpaII CCGG 3 cut(s) 146, 861, 1672
HphI GGTGA 4 cut(s) 340, 1364, 1660, 1953
Hpy166II GTNNAC 6 cut(s) 321, 587, 858, 1009, 1209, 1950
Hpy188I TCNGA 8 cut(s) 247, 305, 406, 625, 753, 826, 922, 1761
Hpy8I GTNNAC 6 cut(s) 321, 587, 858, 1009, 1209, 1950
Hpy99I CGWCG 2 cut(s) 363, 969
HpyAV CCTTC 6 cut(s) 44, 132, 946, 1457, 1486, 1775
HpyCH4III ACNGT 7 cut(s) 691, 744, 882, 1213, 1363, 1444, 1956
HpyF10VI GCNNNNNNNGC 3 cut(s) 392, 955, 1343
Hsp92I GRCGYC 1 cut(s) 361
Hsp92II CATG 6 cut(s) 719, 735, 764, 870, 1663, 1826
HspAI GCGC 1 cut(s) 1128
Kzo9I GATC 7 cut(s) 53, 650, 984, 1266, 1555, 1653, 1932
LmnI GCTCC 7 cut(s) 148, 191, 400, 478, 1741, 1911, 2038
Lsp1109I GCAGC 2 cut(s) 1756, 2042
LweI GCATC 5 cut(s) 173, 268, 369, 1626, 1653
MabI ACCWGGT 1 cut(s) 1168
MaeI CTAG 6 cut(s) 383, 465, 876, 980, 1520, 1977
MaeIII GTNAC 5 cut(s) 328, 691, 1157, 1357, 1836
MalI GATC 7 cut(s) 55, 652, 986, 1268, 1557, 1655, 1934
MboI GATC 7 cut(s) 53, 650, 984, 1266, 1555, 1653, 1932
MboII GAAGA 7 cut(s) 626, 1104, 1107, 1648, 1927, 2010, 2072
MflI RGATCY 1 cut(s) 1555
MhlI GDGCHC 1 cut(s) 310
MlyI GAGTC 4 cut(s) 257, 635, 1461, 1888
MmeI TCCRAC 1 cut(s) 1345
MroXI GAANNNNTTC 2 cut(s) 1261, 1315
MseI TTAA 5 cut(s) 428, 1142, 1223, 1395, 1707
MspI CCGG 3 cut(s) 146, 861, 1672
MspR9I CCNGG 5 cut(s) 738, 1170, 1672, 1793, 1911
Mva1269I GAATGC 2 cut(s) 958, 1768
MvaI CCWGG 4 cut(s) 738, 1170, 1793, 1911
MvnI CGCG 1 cut(s) 1128
MwoI GCNNNNNNNGC 3 cut(s) 392, 955, 1343
NciI CCSGG 1 cut(s) 1672
NcoI CCATGG 1 cut(s) 866
NdeI CATATG 2 cut(s) 370, 1601
NdeII GATC 7 cut(s) 53, 650, 984, 1266, 1555, 1653, 1932
NheI GCTAGC 2 cut(s) 382, 979
NlaIII CATG 6 cut(s) 719, 735, 764, 870, 1663, 1826
NlaIV GGNNCC 3 cut(s) 396, 617, 1557
NmuCI GTSAC 3 cut(s) 328, 1157, 1836
NspI RCATGY 2 cut(s) 719, 1826
PagI TCATGA 1 cut(s) 1659
PctI GAATGC 2 cut(s) 958, 1768
PdmI GAANNNNTTC 2 cut(s) 1261, 1315
PfeI GAWTC 4 cut(s) 37, 748, 1081, 1400
PfoI TCCNGGA 1 cut(s) 1791
PkrI GCNGC 2 cut(s) 1746, 2032
PleI GAGTC 4 cut(s) 256, 634, 1460, 1888
PpsI GAGTC 4 cut(s) 256, 634, 1460, 1888
PpuMI RGGWCCY 1 cut(s) 615
PsiI TTATAA 1 cut(s) 903
Psp124BI GAGCTC 1 cut(s) 310
Psp5II RGGWCCY 1 cut(s) 615
Psp6I CCWGG 4 cut(s) 736, 1168, 1791, 1909
PspGI CCWGG 4 cut(s) 736, 1168, 1791, 1909
PspN4I GGNNCC 3 cut(s) 396, 617, 1557
PspPI GGNCC 3 cut(s) 83, 615, 863
PspPPI RGGWCCY 1 cut(s) 615
PsrI GAACNNNNNNTAC 2 cut(s) 679, 711
PstI CTGCAG 1 cut(s) 2032
PstNI CAGNNNCTG 1 cut(s) 404
PsuI RGATCY 1 cut(s) 1555
RsaI GTAC 5 cut(s) 528, 648, 874, 1092, 2025
RsaNI GTAC 5 cut(s) 527, 647, 873, 1091, 2024
SacI GAGCTC 1 cut(s) 310
SaqAI TTAA 5 cut(s) 428, 1142, 1223, 1395, 1707
SatI GCNGC 2 cut(s) 1745, 2031
Sau3AI GATC 7 cut(s) 53, 650, 984, 1266, 1555, 1653, 1932
Sau96I GGNCC 3 cut(s) 83, 615, 863
SchI GAGTC 4 cut(s) 257, 635, 1461, 1888
ScrFI CCNGG 5 cut(s) 738, 1170, 1672, 1793, 1911
SduI GDGCHC 1 cut(s) 310
SexAI ACCWGGT 1 cut(s) 1168
SfaNI GCATC 5 cut(s) 173, 268, 369, 1626, 1653
SfcI CTRYAG 1 cut(s) 2028
SinI GGWCC 1 cut(s) 615
SmiI ATTTAAAT 1 cut(s) 429
SmlI CTYRAG 3 cut(s) 32, 710, 2045
SmoI CTYRAG 3 cut(s) 32, 710, 2045
SsiI CCGC 2 cut(s) 5, 1847
SspI AATATT 1 cut(s) 293
SspMI CTAG 6 cut(s) 383, 465, 876, 980, 1520, 1977
SstI GAGCTC 1 cut(s) 310
StyD4I CCNGG 5 cut(s) 736, 1168, 1670, 1791, 1909
StyI CCWWGG 3 cut(s) 196, 866, 1684
SwaI ATTTAAAT 1 cut(s) 429
TaaI ACNGT 7 cut(s) 691, 744, 882, 1213, 1363, 1444, 1956
TaqI TCGA 5 cut(s) 79, 358, 774, 1265, 1892
TatI WGTACW 1 cut(s) 1090
TfiI GAWTC 4 cut(s) 37, 748, 1081, 1400
Tru1I TTAA 5 cut(s) 428, 1142, 1223, 1395, 1707
Tru9I TTAA 5 cut(s) 428, 1142, 1223, 1395, 1707
TscAI CASTG 4 cut(s) 238, 1491, 1566, 1875
TseFI GTSAC 3 cut(s) 328, 1157, 1836
TseI GCWGC 2 cut(s) 1744, 2030
Tsp45I GTSAC 3 cut(s) 328, 1157, 1836
TspDTI ATGAA 5 cut(s) 903, 1068, 1505, 1648, 1745
TspGWI ACGGA 3 cut(s) 167, 465, 1997
TspRI CASTG 4 cut(s) 238, 1491, 1566, 1875
VpaK11BI GGWCC 1 cut(s) 615
XagI CCTNNNNNAGG 1 cut(s) 836
XapI RAATTY 5 cut(s) 424, 669, 723, 1107, 1862
XbaI TCTAGA 1 cut(s) 464
XceI RCATGY 2 cut(s) 719, 1826
XcmI CCANNNNNNNNNTGG 1 cut(s) 1169
XmnI GAANNNNTTC 2 cut(s) 1261, 1315
XspI CTAG 6 cut(s) 383, 465, 876, 980, 1520, 1977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.