Rh7CG193900

Belongs to the thiolase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
17063272 .. 17075477
12206 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG193900.1

Sequence Viewer

Length: 336 bp
ATGTTAAACAGGGCCTACCGAACTGCCATTTACAAAGCAAAGCGAGGCGGTTTTAAGGATACTTTAGCTGATGATTTGTTGGCACCTGTTTTGAAGGCAATTATAGAGAGAACAAATTTGAACCCAAGTGAAATTGTGGACCCAAAAACTGGAGAGGAGAGGTATGTTACAATTTATGTGGATGATGGCATCCGGCCAAATGCAAACATGACTGATTTGGCGAAATTGAAGCATGCATTTAAATCAGATAGGACAACAACTGCAGGTATTTCATCACTCAAGTATCAATCCAAATTGAAACCAATTGTGGTGATTCAGTTGCTTGACATGGAATAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

111

Amino Acids

12.47

Weight (kDa)

9.36

Isoelectric Point (pI)

13.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 254
AccB1I GGYRCC 1 cut(s) 82
AccB7I CCANNNNNTGG 1 cut(s) 149
AciI CCGC 1 cut(s) 48
AcoI YGGCCR 1 cut(s) 194
AcsI RAATTY 1 cut(s) 115
AfiI CCNNNNNNNGG 1 cut(s) 149
AgsI TTSAA 4 cut(s) 94, 121, 229, 298
AluBI AGCT 1 cut(s) 68
AluI AGCT 1 cut(s) 68
AoxI GGCC 2 cut(s) 12, 194
ApoI RAATTY 1 cut(s) 115
AspS9I GGNCC 2 cut(s) 12, 139
AsuHPI GGTGA 1 cut(s) 322
AvaII GGWCC 1 cut(s) 139
BaeI ACNNNNGTAYC 2 cut(s) 266, 299
BanI GGYRCC 1 cut(s) 82
BccI CCATC 1 cut(s) 179
BciVI GTATCC 1 cut(s) 52
BfmI CTRYAG 1 cut(s) 261
BfuAI ACCTGC 1 cut(s) 254
BfuI GTATCC 1 cut(s) 52
Bme18I GGWCC 1 cut(s) 139
BmgT120I GGNCC 2 cut(s) 12, 139
BmiI GGNNCC 2 cut(s) 84, 141
BmsI GCATC 1 cut(s) 198
BpmI CTGGAG 1 cut(s) 171
BpuEI CTTGAG 1 cut(s) 263
Bsc4I CCNNNNNNNGG 1 cut(s) 149
Bse1I ACTGG 1 cut(s) 154
BseGI GGATG 2 cut(s) 187, 189
BseLI CCNNNNNNNGG 1 cut(s) 149
BseNI ACTGG 1 cut(s) 154
BseRI GAGGAG 1 cut(s) 170
BshFI GGCC 2 cut(s) 14, 196
BshNI GGYRCC 1 cut(s) 82
BsiSI CCGG 1 cut(s) 193
BslI CCNNNNNNNGG 1 cut(s) 149
BsnI GGCC 2 cut(s) 14, 196
BspACI CCGC 1 cut(s) 48
BspANI GGCC 2 cut(s) 14, 196
BspLI GGNNCC 2 cut(s) 84, 141
BspMAI CTGCAG 1 cut(s) 265
BspMI ACCTGC 1 cut(s) 254
BspT107I GGYRCC 1 cut(s) 82
BsrI ACTGG 1 cut(s) 154
BstC8I GCNNGC 1 cut(s) 234
BstF5I GGATG 2 cut(s) 187, 189
BstNSI RCATGY 1 cut(s) 236
BstSFI CTRYAG 1 cut(s) 261
BsuI GTATCC 1 cut(s) 52
BsuRI GGCC 2 cut(s) 14, 196
BtsCI GGATG 2 cut(s) 187, 189
BveI ACCTGC 1 cut(s) 254
Cac8I GCNNGC 1 cut(s) 234
Cfr13I GGNCC 2 cut(s) 12, 139
CspCI CAANNNNNGTGG 2 cut(s) 159, 194
CviAII CATG 3 cut(s) 208, 233, 328
CviJI RGCY 3 cut(s) 14, 68, 196
CviKI_1 RGCY 3 cut(s) 14, 68, 196
DraI TTTAAA 1 cut(s) 241
EaeI YGGCCR 1 cut(s) 194
Eco47I GGWCC 1 cut(s) 139
EcoO109I RGGNCCY 1 cut(s) 12
EcoT22I ATGCAT 1 cut(s) 238
FaeI CATG 3 cut(s) 211, 236, 331
FaiI YATR 6 cut(s) 104, 165, 177, 209, 234, 329
FatI CATG 3 cut(s) 207, 232, 327
FokI GGATG 2 cut(s) 176, 194
GsuI CTGGAG 1 cut(s) 171
HaeIII GGCC 2 cut(s) 14, 196
HapII CCGG 1 cut(s) 193
Hin1II CATG 3 cut(s) 211, 236, 331
HinfI GANTC 1 cut(s) 313
HpaII CCGG 1 cut(s) 193
HphI GGTGA 1 cut(s) 322
Hpy166II GTNNAC 1 cut(s) 139
Hpy188I TCNGA 1 cut(s) 247
Hpy8I GTNNAC 1 cut(s) 139
HpyAV CCTTC 1 cut(s) 88
HpyCH4V TGCA 3 cut(s) 203, 236, 263
Hsp92II CATG 3 cut(s) 211, 236, 331
LpnPI CCDG 4 cut(s) 99, 135, 206, 249
LweI GCATC 1 cut(s) 198
MaeIII GTNAC 1 cut(s) 166
MfeI CAATTG 1 cut(s) 303
MluCI AATT 7 cut(s) 99, 115, 132, 171, 224, 293, 303
MnlI CCTC 3 cut(s) 38, 148, 153
Mph1103I ATGCAT 1 cut(s) 238
MseI TTAA 3 cut(s) 5, 54, 240
MspI CCGG 1 cut(s) 193
MunI CAATTG 1 cut(s) 303
NlaIII CATG 3 cut(s) 211, 236, 331
NlaIV GGNNCC 2 cut(s) 84, 141
NsiI ATGCAT 1 cut(s) 238
NspI RCATGY 1 cut(s) 236
PaeI GCATGC 1 cut(s) 236
PfeI GAWTC 1 cut(s) 313
PflMI CCANNNNNTGG 1 cut(s) 149
PspN4I GGNNCC 2 cut(s) 84, 141
PspPI GGNCC 2 cut(s) 12, 139
PstI CTGCAG 1 cut(s) 265
SaqAI TTAA 3 cut(s) 5, 54, 240
Sau96I GGNCC 2 cut(s) 12, 139
SetI ASST 4 cut(s) 70, 88, 164, 268
SfaNI GCATC 1 cut(s) 198
SfcI CTRYAG 1 cut(s) 261
SinI GGWCC 1 cut(s) 139
SmiI ATTTAAAT 1 cut(s) 241
SmlI CTYRAG 1 cut(s) 278
SmoI CTYRAG 1 cut(s) 278
SphI GCATGC 1 cut(s) 236
Sse9I AATT 7 cut(s) 99, 115, 132, 171, 224, 293, 303
SsiI CCGC 1 cut(s) 48
SwaI ATTTAAAT 1 cut(s) 241
TasI AATT 7 cut(s) 99, 115, 132, 171, 224, 293, 303
TfiI GAWTC 1 cut(s) 313
Tru1I TTAA 3 cut(s) 5, 54, 240
Tru9I TTAA 3 cut(s) 5, 54, 240
TspDTI ATGAA 1 cut(s) 261
Van91I CCANNNNNTGG 1 cut(s) 149
VpaK11BI GGWCC 1 cut(s) 139
XapI RAATTY 1 cut(s) 115
XceI RCATGY 1 cut(s) 236
Zsp2I ATGCAT 1 cut(s) 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.