Rh4CG104700

cell wall vacuolar inhibitor of fructosidase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
19331509 .. 19350000
18492 bp
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UTR
Exon/CDS
Intron
Rh4CG104700.1

Sequence Viewer

Length: 315 bp
ATGAATAAAATTTCAACCACAGACGAAACATCTTTTACGACATTGTTCAAGCTAGTCAAAGGAGAGCCGCTCTTAAAACCCTTTCCGCATGAGTCAGCCTTACCCACAACGCTAAAGTCCCAAAAGCCGGTGAAGCTCTGTCTAAAGGTCGTGAATGATGTTGGTCTAGGGGCAGATTTATGTGAAAATAGTTTTTCGGGCAGCTCATCTCCTCTCACATATTTGAACAAAACTGTTAGGGATGTTGCGGATATGGCTTCAGCAATTGTTCAGCATTTAGTTCCTCTTGTTTCTCTTTTCAACTATGTTAATTAA

Protein Analysis

104

Amino Acids

11.31

Weight (kDa)

7.78

Isoelectric Point (pI)

25.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 70
AciI CCGC 3 cut(s) 68, 86, 248
AcsI RAATTY 1 cut(s) 9
AcuI CTGAAG 1 cut(s) 243
AfiI CCNNNNNNNGG 1 cut(s) 127
AgsI TTSAA 4 cut(s) 15, 49, 226, 301
AluBI AGCT 3 cut(s) 52, 136, 204
AluI AGCT 3 cut(s) 52, 136, 204
ApeKI GCWGC 1 cut(s) 201
ApoI RAATTY 1 cut(s) 9
AsuHPI GGTGA 1 cut(s) 142
BbvI GCAGC 1 cut(s) 213
BfaI CTAG 2 cut(s) 53, 167
BisI GCNGC 2 cut(s) 68, 202
BlsI GCNGC 2 cut(s) 69, 203
BplI GAGNNNNNCTC 2 cut(s) 54, 86
Bsc4I CCNNNNNNNGG 1 cut(s) 127
Bse118I RCCGGY 1 cut(s) 127
BseGI GGATG 1 cut(s) 247
BseLI CCNNNNNNNGG 1 cut(s) 127
BseRI GAGGAG 1 cut(s) 201
BseXI GCAGC 1 cut(s) 213
BsiSI CCGG 1 cut(s) 128
BslFI GGGAC 1 cut(s) 103
BslI CCNNNNNNNGG 1 cut(s) 127
BsmFI GGGAC 1 cut(s) 103
BspACI CCGC 3 cut(s) 68, 86, 248
BsrBI CCGCTC 1 cut(s) 70
BsrFI RCCGGY 1 cut(s) 127
BssAI RCCGGY 1 cut(s) 127
Bst4CI ACNGT 1 cut(s) 235
BstF5I GGATG 1 cut(s) 247
BstMWI GCNNNNNNNGC 2 cut(s) 133, 254
BstV1I GCAGC 1 cut(s) 213
BtsCI GGATG 1 cut(s) 247
Cfr10I RCCGGY 1 cut(s) 127
CviAII CATG 1 cut(s) 89
CviJI RGCY 7 cut(s) 52, 67, 98, 127, 136, 204, 257
CviKI_1 RGCY 7 cut(s) 52, 67, 98, 127, 136, 204, 257
Eco57I CTGAAG 1 cut(s) 243
FaeI CATG 1 cut(s) 92
FaiI YATR 5 cut(s) 90, 181, 220, 254, 306
FaqI GGGAC 1 cut(s) 103
FatI CATG 1 cut(s) 88
Fnu4HI GCNGC 2 cut(s) 68, 202
FokI GGATG 1 cut(s) 254
Fsp4HI GCNGC 2 cut(s) 68, 202
FspBI CTAG 2 cut(s) 53, 167
GluI GCNGC 2 cut(s) 68, 202
HapII CCGG 1 cut(s) 128
Hin1II CATG 1 cut(s) 92
HinfI GANTC 1 cut(s) 92
HpaII CCGG 1 cut(s) 128
HphI GGTGA 1 cut(s) 142
Hpy188III TCNNGA 1 cut(s) 151
HpyCH4III ACNGT 1 cut(s) 235
HpyF10VI GCNNNNNNNGC 2 cut(s) 133, 254
Hsp92II CATG 1 cut(s) 92
LpnPI CCDG 1 cut(s) 141
Lsp1109I GCAGC 1 cut(s) 213
MaeI CTAG 2 cut(s) 53, 167
MbiI CCGCTC 1 cut(s) 70
MfeI CAATTG 1 cut(s) 264
MluCI AATT 3 cut(s) 9, 264, 310
MlyI GAGTC 1 cut(s) 101
MnlI CCTC 2 cut(s) 222, 294
MseI TTAA 3 cut(s) 74, 309, 313
MspI CCGG 1 cut(s) 128
MunI CAATTG 1 cut(s) 264
MwoI GCNNNNNNNGC 2 cut(s) 133, 254
NlaIII CATG 1 cut(s) 92
PacI TTAATTAA 1 cut(s) 313
PkrI GCNGC 2 cut(s) 69, 203
PleI GAGTC 1 cut(s) 100
PpsI GAGTC 1 cut(s) 100
SaqAI TTAA 3 cut(s) 74, 309, 313
SatI GCNGC 2 cut(s) 68, 202
SchI GAGTC 1 cut(s) 101
SetI ASST 4 cut(s) 54, 138, 150, 206
SgeI CNNG 8 cut(s) 61, 65, 101, 140, 163, 179, 210, 299
Sse9I AATT 3 cut(s) 9, 264, 310
SsiI CCGC 3 cut(s) 68, 86, 248
SspMI CTAG 2 cut(s) 53, 167
TaaI ACNGT 1 cut(s) 235
TasI AATT 3 cut(s) 9, 264, 310
TauI GCSGC 1 cut(s) 70
Tru1I TTAA 3 cut(s) 74, 309, 313
Tru9I TTAA 3 cut(s) 74, 309, 313
TseI GCWGC 1 cut(s) 201
TspDTI ATGAA 1 cut(s) 17
XapI RAATTY 1 cut(s) 9
XspI CTAG 2 cut(s) 53, 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.