Rh6CG099200

Family of unknown function (DUF716)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
10996634 .. 10997098
465 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG099200.1

Sequence Viewer

Length: 465 bp
ATGGGCACGTTCATTGGGCACGTAGTACCTGGCTTTGCCCTCACCCTTCTTGGTTTATGGCACACAGTCAACACTATCAGATCTTATTTTCTCAAAGGCACTAGTAACTTTAGAGTGAGGTTTTGGTACCCATTGAACTGCCCTTTTTCCAAAATTAAACACCTGGAACTCATTTTCATCTTATCTTTCTCTGTATTTGCAGTTATTGTGCAAGTTCTAGACTTCCCTGTTCTTAACTTCTCCTTCAAGCTCCATAATTTGGAGCATGCAACCATGTTCCTCCACCTTGCATATTTGCAGGGTTTACGCTTTCAGCTGAGTTTATTAATTCATTTCAAATCCTATCTGGGGTCGTTGGATTGCTTACGGCCTCTGTTTTCTGCCAAGAGCTTTTCCTTCTCCATTTCCACTCCACTGACCATGTTGGTCTTGAAGGGCATTATCATTGGTTATTGCAGCTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

154

Amino Acids

17.58

Weight (kDa)

9.76

Isoelectric Point (pI)

21.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 126
AccB1I GGYRCC 1 cut(s) 126
AccB7I CCANNNNNTGG 1 cut(s) 259
AfaI GTAC 2 cut(s) 27, 128
AfiI CCNNNNNNNGG 2 cut(s) 259, 348
AgsI TTSAA 4 cut(s) 136, 247, 337, 433
AhlI ACTAGT 1 cut(s) 101
AjnI CCWGG 2 cut(s) 28, 162
AluBI AGCT 4 cut(s) 250, 316, 390, 459
AluI AGCT 4 cut(s) 250, 316, 390, 459
AoxI GGCC 1 cut(s) 368
ApeKI GCWGC 1 cut(s) 456
AseI ATTAAT 1 cut(s) 326
Asp718I GGTACC 1 cut(s) 126
AsuHPI GGTGA 1 cut(s) 34
BaeGI GKGCMC 2 cut(s) 8, 21
BanI GGYRCC 1 cut(s) 126
BceAI ACGGC 1 cut(s) 383
BciT130I CCWGG 2 cut(s) 30, 164
BcuI ACTAGT 1 cut(s) 101
BfaI CTAG 2 cut(s) 102, 218
BglII AGATCT 1 cut(s) 80
BisI GCNGC 1 cut(s) 457
BlsI GCNGC 1 cut(s) 458
Bme1390I CCNGG 2 cut(s) 30, 164
BmiI GGNNCC 1 cut(s) 128
BmrFI CCNGG 2 cut(s) 30, 164
BsaAI YACGTR 1 cut(s) 22
Bsc4I CCNNNNNNNGG 2 cut(s) 259, 348
BseBI CCWGG 2 cut(s) 30, 164
BseLI CCNNNNNNNGG 2 cut(s) 259, 348
BseMII CTCAG 1 cut(s) 308
BseSI GKGCMC 2 cut(s) 8, 21
BshFI GGCC 1 cut(s) 370
BshNI GGYRCC 1 cut(s) 126
BslI CCNNNNNNNGG 2 cut(s) 259, 348
BsnI GGCC 1 cut(s) 370
Bsp1286I GDGCHC 2 cut(s) 8, 21
Bsp143I GATC 1 cut(s) 80
BspANI GGCC 1 cut(s) 370
BspCNI CTCAG 1 cut(s) 309
BspLI GGNNCC 1 cut(s) 128
BspT107I GGYRCC 1 cut(s) 126
BssMI GATC 1 cut(s) 80
Bst2UI CCWGG 2 cut(s) 30, 164
Bst4CI ACNGT 1 cut(s) 67
BstBAI YACGTR 1 cut(s) 22
BstC8I GCNNGC 1 cut(s) 267
BstDEI CTNAG 1 cut(s) 317
BstKTI GATC 1 cut(s) 83
BstMBI GATC 1 cut(s) 80
BstNI CCWGG 2 cut(s) 30, 164
BstNSI RCATGY 1 cut(s) 269
BstSCI CCNGG 2 cut(s) 28, 162
BstSLI GKGCMC 2 cut(s) 8, 21
BstX2I RGATCY 1 cut(s) 80
BstYI RGATCY 1 cut(s) 80
BsuRI GGCC 1 cut(s) 370
BtsIMutI CAGTG 1 cut(s) 413
Cac8I GCNNGC 1 cut(s) 267
Csp6I GTAC 2 cut(s) 26, 127
CviAII CATG 3 cut(s) 266, 274, 421
CviJI RGCY 6 cut(s) 33, 250, 316, 370, 390, 459
CviKI_1 RGCY 6 cut(s) 33, 250, 316, 370, 390, 459
CviQI GTAC 2 cut(s) 26, 127
DdeI CTNAG 1 cut(s) 317
DpnI GATC 1 cut(s) 82
DpnII GATC 1 cut(s) 80
EcoRII CCWGG 2 cut(s) 28, 162
FaeI CATG 3 cut(s) 269, 277, 424
FaiI YATR 7 cut(s) 58, 255, 267, 275, 292, 422, 463
FatI CATG 3 cut(s) 265, 273, 420
Fnu4HI GCNGC 1 cut(s) 457
Fsp4HI GCNGC 1 cut(s) 457
FspBI CTAG 2 cut(s) 102, 218
GluI GCNGC 1 cut(s) 457
HaeIII GGCC 1 cut(s) 370
Hin1II CATG 3 cut(s) 269, 277, 424
HincII GTYRAC 1 cut(s) 70
HindII GTYRAC 1 cut(s) 70
HphI GGTGA 1 cut(s) 34
Hpy166II GTNNAC 2 cut(s) 70, 305
Hpy188I TCNGA 1 cut(s) 80
Hpy188III TCNNGA 2 cut(s) 218, 430
Hpy8I GTNNAC 2 cut(s) 70, 305
HpyAV CCTTC 4 cut(s) 56, 253, 406, 427
HpyCH4III ACNGT 1 cut(s) 67
HpyCH4IV ACGT 2 cut(s) 8, 21
HpyCH4V TGCA 6 cut(s) 200, 211, 269, 290, 298, 456
HpyF3I CTNAG 1 cut(s) 317
HpySE526I ACGT 2 cut(s) 8, 21
Hsp92II CATG 3 cut(s) 269, 277, 424
KpnI GGTACC 1 cut(s) 130
Kzo9I GATC 1 cut(s) 80
LmnI GCTCC 2 cut(s) 255, 262
LpnPI CCDG 7 cut(s) 15, 42, 149, 176, 240, 284, 332
MaeI CTAG 2 cut(s) 102, 218
MaeII ACGT 2 cut(s) 8, 21
MaeIII GTNAC 1 cut(s) 104
MalI GATC 1 cut(s) 82
MboI GATC 1 cut(s) 80
MflI RGATCY 1 cut(s) 80
MhlI GDGCHC 2 cut(s) 8, 21
MluCI AATT 3 cut(s) 153, 256, 327
MmeI TCCRAC 1 cut(s) 336
MnlI CCTC 4 cut(s) 50, 111, 290, 381
MseI TTAA 3 cut(s) 156, 234, 326
MspA1I CMGCKG 1 cut(s) 316
MspR9I CCNGG 2 cut(s) 30, 164
MvaI CCWGG 2 cut(s) 30, 164
NdeII GATC 1 cut(s) 80
NlaIII CATG 3 cut(s) 269, 277, 424
NlaIV GGNNCC 1 cut(s) 128
NspI RCATGY 1 cut(s) 269
PaeI GCATGC 1 cut(s) 269
PflMI CCANNNNNTGG 1 cut(s) 259
PkrI GCNGC 1 cut(s) 458
Ppu21I YACGTR 1 cut(s) 22
PshBI ATTAAT 1 cut(s) 326
Psp6I CCWGG 2 cut(s) 28, 162
PspGI CCWGG 2 cut(s) 28, 162
PspN4I GGNNCC 1 cut(s) 128
PsuI RGATCY 1 cut(s) 80
PvuII CAGCTG 1 cut(s) 316
RsaI GTAC 2 cut(s) 27, 128
RsaNI GTAC 2 cut(s) 26, 127
SaqAI TTAA 3 cut(s) 156, 234, 326
SatI GCNGC 1 cut(s) 457
Sau3AI GATC 1 cut(s) 80
ScrFI CCNGG 2 cut(s) 30, 164
SduI GDGCHC 2 cut(s) 8, 21
SpeI ACTAGT 1 cut(s) 101
SphI GCATGC 1 cut(s) 269
Sse9I AATT 3 cut(s) 153, 256, 327
SspMI CTAG 2 cut(s) 102, 218
StyD4I CCNGG 2 cut(s) 28, 162
TaaI ACNGT 1 cut(s) 67
TaiI ACGT 2 cut(s) 11, 24
TasI AATT 3 cut(s) 153, 256, 327
Tru1I TTAA 3 cut(s) 156, 234, 326
Tru9I TTAA 3 cut(s) 156, 234, 326
TscAI CASTG 1 cut(s) 420
TseI GCWGC 1 cut(s) 456
TspDTI ATGAA 2 cut(s) 166, 320
TspRI CASTG 1 cut(s) 420
Van91I CCANNNNNTGG 1 cut(s) 259
VspI ATTAAT 1 cut(s) 326
XbaI TCTAGA 1 cut(s) 217
XceI RCATGY 1 cut(s) 269
XspI CTAG 2 cut(s) 102, 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.