Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0001850

Physical Location & Seq

Genomic Coordinates Forward (+)

40227898 .. 40234644

Gene Structure 6747 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG224300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGAGCATCGGCTCCATCGAGACCTTCGAAGGTGTCCCCTTTGGCGGCAACTTGAACCAGAAAGGCCCCGCGAAACGAATATATGACCCCATGCCAAAGCCCGCGTTTAGAAACCTACATGTGAGTGTGACTGTGACTGACCTTCCTTTTCTCAATGTGCAGTTCGAGCATGACACAATGCAGAGACAGTATTTCAAGGACAGGGCAGCACTTGAAGCCGAGTTTCAACAATCTTGTCTACCTCTGCACAATCAGATTACTGAGCACGATGAACGAGCTCTTAAGTTTCTTAGAGACATCAAGTGGTCTAAAACAGATAGCCAAAGGGGGTTTGGTTTCAAGCTTGAGTTCTTCTTTGACAGCAATCCTTTCTTTCAAAATCCTGTCTTAACAAAGACTTATGACAAGATTGACAAAGATTTACCCATTTTAAGAAAAGCAATAGGGACTGAGATAGAATGGTATAGCAGAACACGTTTGACACCAAATCTCAATGAGAAGAGGCTTTATGAGGGCACTAACAATTGGGGAAGTTTCTTCAACTTTTTCAGTCCACCCCAAGTCCCCAAAGTTATAGATGGAAAAGCGGCCAAGGAAATCCAAAACCTTATGGAACAAGATTATGAAATTGGGTCAACCATTCGAGAGGTCATTCCCTATGCTGTGTCATGGTTTGCAAAAAGTGTACCAACTTCTGCCACCTCTCTCCTCGGTAATTCACCTATCAGAATATCCAATCCTGCCTCTGGAGGAATTCTCAACGACCAGGCAGTGCTCCTGAGCGCTTTCAATGATAAGATGCAGATTTTAGATGGGCAGGACTCCGTTATCCTCAGGGGCCTGGGAAATATCCAGAGAGGAGCACTTAGAGCCAAGTATGAAGAATTGTATGAATCTCTCTACAACAAGCGATGCAGTATTGTAAACGGTGATGCTGGACCTGAAGGAGATTCTAATGAAGCTGCCACAAAGCAGGAGCCTGCAACCTGTAAATGCACTTGTGTAAAAGCTGTTACTGAACCAGATTTAGTTGCTTTCATACGCTCTAGAGTGAATGGAGTGCCTGGATTCTGGCTCCATGCTTTATCAAAAAATAACTTGCTAACACGAGAGATTATTGGGCGTGACACTGAAGCTCTTGCATATCTTAGAGACATCAAGGGGTCCAAGATAGATGGTGACAACAAGGGATTTAAACTCGACTTCTATTTTGAACCTAATAACTTTTTTATGAACCCGGTTTTGACCAAGACATATCATATGGTTGATGAAGGTGTACCCATTCTAGCAAAAGCAATAGGGACGGAAATTGAATGGTATCCAGGTCGTTGCTTGACAAAGAACACCATTGAGAAGAATAGTAAGAAAGGATCTTTTCCCAAACGAACTGAAAATCGTAAAAGTTTCTTCAACTTTTTCAGTACATATAAAGTCCTTGAAGATATTGATGCTGTTAGAAACCAAATGGAAATAGATTATGAAATTGGCTTTGTGAAGGACGTACTGGTTGACTTATTTCTTCCGTCTTGTTATTTGGCTGTTTCTTGGTTTACGGGGGAGGCTTGGAGAAGTACGGATGAATACAGTGACACTGAGGGTGATGATGACGAAGATGATGATGAGGATGATGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000150 GO:0000217 GO:0000400 GO:0000724 GO:0000725 GO:0000730 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008094 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009987 GO:0010212 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0033554 GO:0034622 GO:0034641 GO:0042148 GO:0042623 GO:0043170 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0045003 GO:0046483 GO:0050896 GO:0051716 GO:0065003 GO:0065004 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090735 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAP

Protein Analysis

544

Amino Acids

61.88

Weight (kDa)

5.11

Isoelectric Point (pI)

41.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAP	PF00956	83 - 226	1.8e-35	Nucleosome assembly protein (NAP)
NAP	PF00956	288 - 520	2.5e-48	Nucleosome assembly protein (NAP)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001850)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0057701 RchiOBHm_Chr6g0278381
rosa_multiflora	Rmu_sc0002080.1_g000035 Rmu_sc0002482.1_g000015 Rmu_sc0003837.1_g000009 Rmu_sc0005852.1_g000009 Rmu_sc0006325.1_g000033 Rmu_sc0009634.1_g000001 Rmu_ssc0000435.1_g000003
rosa_roxburghii	Rroxscaffold_1G00033310 Rroxscaffold_2G00097210 Rroxscaffold_2G00100530 Rroxscaffold_3G00222980 Rroxscaffold_3G00223140 Rroxscaffold_4G00283070 Rroxscaffold_4G00302540 Rroxscaffold_5G00334950 Rroxscaffold_5G00336780 Rroxscaffold_5G00337950 Rroxscaffold_5G00358620 Rroxscaffold_5G00367500 Rroxscaffold_6G00401010 Rroxscaffold_6G00401040 Rroxscaffold_7G00179780 Rroxscaffold_7G00190410 Rroxscaffold_7G00190420 Rroxscaffold_7G00204930
rosa_rugosa	Rorug05G0490900.1 Rorug06G0116200
rosa_samantha	Rh1AG219300 Rh1BG343800 Rh1CG203800 Rh2BG515200 Rh2DG527300 Rh5CG412400 Rh6AG225900 Rh6AG229500 Rh6BG229900 Rh6BG240600 Rh6CG233100 Rh6DG224300 Rh7BG250000 Rh7CG511800 Rh7DG478500
rosa_wichuraiana	Rw6G007070 Rw6G019700 Rw6G020090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	238
AccII	CGCG	2 cut(s)	71, 104
AciI	CCGC	4 cut(s)	45, 69, 102, 587
AclWI	GGATC	1 cut(s)	1378
AcoI	YGGCCR	1 cut(s)	588
AcsI	RAATTY	1 cut(s)	753
AcuI	CTGAAG	2 cut(s)	963, 1152
AfaI	GTAC	5 cut(s)	687, 1278, 1423, 1503, 1573
AfeI	AGCGCT	1 cut(s)	784
AfiI	CCNNNNNNNGG	2 cut(s)	44, 746
AflII	CTTAAG	1 cut(s)	281
AflIII	ACRYGT	2 cut(s)	118, 473
AjnI	CCWGG	4 cut(s)	765, 840, 1063, 1321
AluBI	AGCT	5 cut(s)	278, 343, 962, 1010, 1136
AluI	AGCT	5 cut(s)	278, 343, 962, 1010, 1136
Alw21I	GWGCWC	4 cut(s)	267, 280, 777, 865
Alw26I	GTCTC	4 cut(s)	14, 178, 288, 1146
AlwI	GGATC	1 cut(s)	1378
Aor51HI	AGCGCT	1 cut(s)	784
AoxI	GGCC	3 cut(s)	64, 588, 838
ApeKI	GCWGC	2 cut(s)	206, 962
ApoI	RAATTY	1 cut(s)	753
ArsI	GACNNNNNNTTYG	2 cut(s)	1193, 1225
AspLEI	GCGC	1 cut(s)	785
AspS9I	GGNCC	4 cut(s)	65, 838, 938, 1164
AsuC2I	CCSGG	1 cut(s)	1238
AsuHPI	GGTGA	4 cut(s)	711, 941, 1190, 1610
AsuII	TTCGAA	1 cut(s)	27
AvaII	GGWCC	2 cut(s)	938, 1164
AxyI	CCTNAGG	1 cut(s)	833
BaeGI	GKGCMC	1 cut(s)	518
BanII	GRGCYC	1 cut(s)	280
BauI	CACGAG	1 cut(s)	1107
Bbv12I	GWGCWC	4 cut(s)	267, 280, 777, 865
BbvI	GCAGC	2 cut(s)	218, 949
BccI	CCATC	4 cut(s)	23, 572, 806, 1169
BciT130I	CCWGG	4 cut(s)	767, 842, 1065, 1323
BciVI	GTATCC	1 cut(s)	1329
BcnI	CCSGG	1 cut(s)	1238
BcoDI	GTCTC	4 cut(s)	14, 178, 288, 1146
BfaI	CTAG	2 cut(s)	1047, 1286
BfoI	RGCGCY	1 cut(s)	786
BfrI	CTTAAG	1 cut(s)	281
BfuI	GTATCC	1 cut(s)	1329
BisI	GCNGC	4 cut(s)	46, 207, 588, 963
BlsI	GCNGC	4 cut(s)	47, 208, 589, 964
Bme1390I	CCNGG	5 cut(s)	767, 842, 1065, 1238, 1323
Bme18I	GGWCC	2 cut(s)	938, 1164
BmgT120I	GGNCC	4 cut(s)	65, 838, 938, 1164
BmiI	GGNNCC	6 cut(s)	13, 67, 839, 978, 1076, 1165
BmrFI	CCNGG	5 cut(s)	767, 842, 1065, 1238, 1323
BmsI	GCATC	5 cut(s)	15, 789, 902, 922, 1438
BplI	GAGNNNNNCTC	2 cut(s)	741, 773
BpmI	CTGGAG	1 cut(s)	768
Bpu10I	CCTNAGC	1 cut(s)	779
Bpu14I	TTCGAA	1 cut(s)	27
BpuEI	CTTGAG	1 cut(s)	365
BpuMI	CCSGG	1 cut(s)	1238
BsaI	GGTCTC	1 cut(s)	14
BsaJI	CCNNGG	3 cut(s)	591, 709, 841
Bsc4I	CCNNNNNNNGG	2 cut(s)	44, 746
Bse1I	ACTGG	1 cut(s)	1509
Bse21I	CCTNAGG	1 cut(s)	833
BseBI	CCWGG	4 cut(s)	767, 842, 1065, 1323
BseDI	CCNNGG	3 cut(s)	591, 709, 841
BseGI	GGATG	2 cut(s)	1582, 1630
BseLI	CCNNNNNNNGG	2 cut(s)	44, 746
BseMII	CTCAG	5 cut(s)	252, 441, 770, 847, 1584
BseNI	ACTGG	1 cut(s)	1509
BseRI	GAGGAG	2 cut(s)	698, 873
BseSI	GKGCMC	1 cut(s)	518
BseXI	GCAGC	2 cut(s)	218, 949
BsgI	GTGCAG	2 cut(s)	179, 230
Bsh1236I	CGCG	2 cut(s)	71, 104
BshFI	GGCC	3 cut(s)	66, 590, 840
BsiHKAI	GWGCWC	4 cut(s)	267, 280, 777, 865
BsiSI	CCGG	1 cut(s)	1238
BslFI	GGGAC	4 cut(s)	20, 460, 548, 1315
BslI	CCNNNNNNNGG	2 cut(s)	44, 746
BsmAI	GTCTC	4 cut(s)	14, 178, 288, 1146
BsmFI	GGGAC	4 cut(s)	20, 460, 548, 1315
BsnI	GGCC	3 cut(s)	66, 590, 840
Bso31I	GGTCTC	1 cut(s)	14
Bsp119I	TTCGAA	1 cut(s)	27
Bsp1286I	GDGCHC	5 cut(s)	267, 280, 518, 777, 865
Bsp143I	GATC	1 cut(s)	1370
BspACI	CCGC	4 cut(s)	45, 69, 102, 587
BspANI	GGCC	3 cut(s)	66, 590, 840
BspCNI	CTCAG	5 cut(s)	253, 442, 771, 846, 1585
BspFNI	CGCG	2 cut(s)	71, 104
BspLI	GGNNCC	6 cut(s)	13, 67, 839, 978, 1076, 1165
BspPI	GGATC	1 cut(s)	1378
BspT104I	TTCGAA	1 cut(s)	27
BspTI	CTTAAG	1 cut(s)	281
BspTNI	GGTCTC	1 cut(s)	14
BsrI	ACTGG	1 cut(s)	1509
BssECI	CCNNGG	3 cut(s)	591, 709, 841
BssMI	GATC	1 cut(s)	1370
BssSI	CACGAG	1 cut(s)	1107
BssT1I	CCWWGG	1 cut(s)	591
Bst2BI	CACGAG	1 cut(s)	1107
Bst2UI	CCWGG	4 cut(s)	767, 842, 1065, 1323
Bst4CI	ACNGT	4 cut(s)	133, 189, 929, 1586
Bst6I	CTCTTC	1 cut(s)	494
BstAFI	CTTAAG	1 cut(s)	281
BstBI	TTCGAA	1 cut(s)	27
BstC8I	GCNNGC	2 cut(s)	102, 981
BstDEI	CTNAG	8 cut(s)	261, 290, 450, 779, 833, 866, 1148, 1593
BstF5I	GGATG	2 cut(s)	1582, 1630
BstFNI	CGCG	2 cut(s)	71, 104
BstH2I	RGCGCY	1 cut(s)	786
BstHHI	GCGC	1 cut(s)	785
BstKTI	GATC	1 cut(s)	1373
BstMAI	GTCTC	4 cut(s)	14, 178, 288, 1146
BstMBI	GATC	1 cut(s)	1370
BstMWI	GCNNNNNNNGC	3 cut(s)	166, 215, 869
BstNI	CCWGG	4 cut(s)	767, 842, 1065, 1323
BstNSI	RCATGY	1 cut(s)	122
BstSCI	CCNGG	5 cut(s)	765, 840, 1063, 1236, 1321
BstSLI	GKGCMC	1 cut(s)	518
BstUI	CGCG	2 cut(s)	71, 104
BstV1I	GCAGC	2 cut(s)	218, 949
BstX2I	RGATCY	1 cut(s)	1370
BstYI	RGATCY	1 cut(s)	1370
Bsu36I	CCTNAGG	1 cut(s)	833
BsuI	GTATCC	1 cut(s)	1329
BsuRI	GGCC	3 cut(s)	66, 590, 840
BtgZI	GCGATG	1 cut(s)	925
BtsCI	GGATG	2 cut(s)	1582, 1630
BtsI	GCAGTG	1 cut(s)	777
BtsIMutI	CAGTG	4 cut(s)	777, 1128, 1590, 1591
Cac8I	GCNNGC	2 cut(s)	102, 981
CfoI	GCGC	1 cut(s)	785
Cfr13I	GGNCC	4 cut(s)	65, 838, 938, 1164
Csp6I	GTAC	5 cut(s)	686, 1277, 1422, 1502, 1572
CviAII	CATG	5 cut(s)	91, 119, 170, 669, 1079
CviQI	GTAC	5 cut(s)	686, 1277, 1422, 1502, 1572
DdeI	CTNAG	8 cut(s)	261, 290, 450, 779, 833, 866, 1148, 1593
DpnI	GATC	1 cut(s)	1372
DpnII	GATC	1 cut(s)	1370
DraI	TTTAAA	1 cut(s)	1195
EaeI	YGGCCR	1 cut(s)	588
Eam1104I	CTCTTC	1 cut(s)	494
EarI	CTCTTC	1 cut(s)	494
Ecl136II	GAGCTC	1 cut(s)	278
Eco130I	CCWWGG	1 cut(s)	591
Eco24I	GRGCYC	1 cut(s)	280
Eco31I	GGTCTC	1 cut(s)	14
Eco47I	GGWCC	2 cut(s)	938, 1164
Eco47III	AGCGCT	1 cut(s)	784
Eco53kI	GAGCTC	1 cut(s)	278
Eco57I	CTGAAG	2 cut(s)	963, 1152
Eco81I	CCTNAGG	1 cut(s)	833
EcoICRI	GAGCTC	1 cut(s)	278
EcoO109I	RGGNCCY	2 cut(s)	65, 838
EcoRI	GAATTC	1 cut(s)	753
EcoRII	CCWGG	4 cut(s)	765, 840, 1063, 1321
EcoT14I	CCWWGG	1 cut(s)	591
EcoT38I	GRGCYC	1 cut(s)	280
ErhI	CCWWGG	1 cut(s)	591
FaeI	CATG	5 cut(s)	94, 122, 173, 672, 1082
FaqI	GGGAC	4 cut(s)	20, 460, 548, 1315
FatI	CATG	5 cut(s)	90, 118, 169, 668, 1078
FauI	CCCGC	2 cut(s)	76, 109
FauNDI	CATATG	1 cut(s)	1260
FblI	GTMKAC	1 cut(s)	238
Fnu4HI	GCNGC	4 cut(s)	46, 207, 588, 963
FokI	GGATG	1 cut(s)	1589
FriOI	GRGCYC	1 cut(s)	280
Fsp4HI	GCNGC	4 cut(s)	46, 207, 588, 963
FspBI	CTAG	2 cut(s)	1047, 1286
GlaI	GCGC	1 cut(s)	784
GluI	GCNGC	4 cut(s)	46, 207, 588, 963
GsuI	CTGGAG	1 cut(s)	768
HaeII	RGCGCY	1 cut(s)	786
HaeIII	GGCC	3 cut(s)	66, 590, 840
HapII	CCGG	1 cut(s)	1238
HhaI	GCGC	1 cut(s)	785
Hin1II	CATG	5 cut(s)	94, 122, 173, 672, 1082
Hin6I	GCGC	1 cut(s)	783
HinP1I	GCGC	1 cut(s)	783
HincII	GTYRAC	2 cut(s)	636, 1510
HindII	GTYRAC	2 cut(s)	636, 1510
HindIII	AAGCTT	1 cut(s)	341
HinfI	GANTC	4 cut(s)	821, 893, 950, 1068
HpaII	CCGG	1 cut(s)	1238
HphI	GGTGA	4 cut(s)	711, 941, 1190, 1610
Hpy166II	GTNNAC	8 cut(s)	239, 554, 636, 686, 925, 1277, 1510, 1551
Hpy188I	TCNGA	2 cut(s)	255, 728
Hpy188III	TCNNGA	6 cut(s)	19, 644, 747, 778, 853, 1047
Hpy8I	GTNNAC	8 cut(s)	239, 554, 636, 686, 925, 1277, 1510, 1551
HpyAV	CCTTC	6 cut(s)	23, 34, 152, 938, 1265, 1489
HpyCH4III	ACNGT	4 cut(s)	133, 189, 929, 1586
HpyCH4IV	ACGT	2 cut(s)	475, 1500
HpyCH4V	TGCA	9 cut(s)	160, 181, 247, 677, 802, 915, 983, 996, 1142
HpyF10VI	GCNNNNNNNGC	3 cut(s)	166, 215, 869
HpyF3I	CTNAG	8 cut(s)	261, 290, 450, 779, 833, 866, 1148, 1593
HpySE526I	ACGT	2 cut(s)	475, 1500
Hsp92II	CATG	5 cut(s)	94, 122, 173, 672, 1082
HspAI	GCGC	1 cut(s)	783
Kzo9I	GATC	1 cut(s)	1370
LmnI	GCTCC	5 cut(s)	17, 780, 860, 976, 1080
Lsp1109I	GCAGC	2 cut(s)	218, 949
LweI	GCATC	5 cut(s)	15, 789, 902, 922, 1438
MaeI	CTAG	2 cut(s)	1047, 1286
MaeII	ACGT	2 cut(s)	475, 1500
MaeIII	GTNAC	6 cut(s)	127, 133, 1012, 1124, 1178, 1586
MalI	GATC	1 cut(s)	1372
MboI	GATC	1 cut(s)	1370
MboII	GAAGA	9 cut(s)	343, 511, 529, 893, 1366, 1399, 1451, 1511, 1622
MfeI	CAATTG	1 cut(s)	523
MflI	RGATCY	1 cut(s)	1370
MhlI	GDGCHC	5 cut(s)	267, 280, 518, 777, 865
MluCI	AATT	7 cut(s)	523, 627, 715, 753, 884, 1308, 1482
MlyI	GAGTC	1 cut(s)	815
MseI	TTAA	4 cut(s)	282, 389, 431, 1194
MslI	CAYNNNNRTG	1 cut(s)	123
MspCI	CTTAAG	1 cut(s)	281
MspI	CCGG	1 cut(s)	1238
MspR9I	CCNGG	5 cut(s)	767, 842, 1065, 1238, 1323
MunI	CAATTG	1 cut(s)	523
MvaI	CCWGG	4 cut(s)	767, 842, 1065, 1323
MvnI	CGCG	2 cut(s)	71, 104
MwoI	GCNNNNNNNGC	3 cut(s)	166, 215, 869
NciI	CCSGG	1 cut(s)	1238
NdeI	CATATG	1 cut(s)	1260
NdeII	GATC	1 cut(s)	1370
NlaIII	CATG	5 cut(s)	94, 122, 173, 672, 1082
NlaIV	GGNNCC	6 cut(s)	13, 67, 839, 978, 1076, 1165
NmeAIII	GCCGAG	1 cut(s)	244
NmuCI	GTSAC	5 cut(s)	127, 133, 1124, 1178, 1586
NspI	RCATGY	1 cut(s)	122
NspV	TTCGAA	1 cut(s)	27
PciI	ACATGT	1 cut(s)	118
PcsI	WCGNNNNNNNCGW	2 cut(s)	15, 24
PfeI	GAWTC	3 cut(s)	893, 950, 1068
PkrI	GCNGC	4 cut(s)	47, 208, 589, 964
PleI	GAGTC	1 cut(s)	815
PpsI	GAGTC	1 cut(s)	815
PscI	ACATGT	1 cut(s)	118
Psp124BI	GAGCTC	1 cut(s)	280
Psp6I	CCWGG	4 cut(s)	765, 840, 1063, 1321
PspGI	CCWGG	4 cut(s)	765, 840, 1063, 1321
PspN4I	GGNNCC	6 cut(s)	13, 67, 839, 978, 1076, 1165
PspPI	GGNCC	4 cut(s)	65, 838, 938, 1164
PsuI	RGATCY	1 cut(s)	1370
RsaI	GTAC	5 cut(s)	687, 1278, 1423, 1503, 1573
RsaNI	GTAC	5 cut(s)	686, 1277, 1422, 1502, 1572
RseI	CAYNNNNRTG	1 cut(s)	123
SacI	GAGCTC	1 cut(s)	280
SaqAI	TTAA	4 cut(s)	282, 389, 431, 1194
SatI	GCNGC	4 cut(s)	46, 207, 588, 963
Sau3AI	GATC	1 cut(s)	1370
Sau96I	GGNCC	4 cut(s)	65, 838, 938, 1164
SchI	GAGTC	1 cut(s)	815
ScrFI	CCNGG	5 cut(s)	767, 842, 1065, 1238, 1323
SduI	GDGCHC	5 cut(s)	267, 280, 518, 777, 865
SfaNI	GCATC	5 cut(s)	15, 789, 902, 922, 1438
SfuI	TTCGAA	1 cut(s)	27
SinI	GGWCC	2 cut(s)	938, 1164
SmiMI	CAYNNNNRTG	1 cut(s)	123
SmlI	CTYRAG	2 cut(s)	281, 344
SmoI	CTYRAG	2 cut(s)	281, 344
Sse9I	AATT	7 cut(s)	523, 627, 715, 753, 884, 1308, 1482
SsiI	CCGC	4 cut(s)	45, 69, 102, 587
SspMI	CTAG	2 cut(s)	1047, 1286
SstI	GAGCTC	1 cut(s)	280
StyD4I	CCNGG	5 cut(s)	765, 840, 1063, 1236, 1321
StyI	CCWWGG	1 cut(s)	591
TaaI	ACNGT	4 cut(s)	133, 189, 929, 1586
TaiI	ACGT	2 cut(s)	478, 1503
TaqI	TCGA	5 cut(s)	18, 27, 165, 643, 1200
TasI	AATT	7 cut(s)	523, 627, 715, 753, 884, 1308, 1482
TatI	WGTACW	1 cut(s)	1421
TauI	GCSGC	2 cut(s)	48, 590
TfiI	GAWTC	3 cut(s)	893, 950, 1068
Tru1I	TTAA	4 cut(s)	282, 389, 431, 1194
Tru9I	TTAA	4 cut(s)	282, 389, 431, 1194
TscAI	CASTG	4 cut(s)	777, 1135, 1591, 1597
TseFI	GTSAC	5 cut(s)	127, 133, 1124, 1178, 1586
TseI	GCWGC	2 cut(s)	206, 962
Tsp45I	GTSAC	5 cut(s)	127, 133, 1124, 1178, 1586
TspGWI	ACGGA	4 cut(s)	814, 1319, 1512, 1589
TspRI	CASTG	4 cut(s)	777, 1135, 1591, 1597
Vha464I	CTTAAG	1 cut(s)	281
VpaK11BI	GGWCC	2 cut(s)	938, 1164
XapI	RAATTY	1 cut(s)	753
XbaI	TCTAGA	1 cut(s)	1046
XceI	RCATGY	1 cut(s)	122
XcmI	CCANNNNNNNNNTGG	1 cut(s)	329
XmiI	GTMKAC	1 cut(s)	238
XspI	CTAG	2 cut(s)	1047, 1286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.