Rh7CG508100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
68694465 .. 68696546
2082 bp
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UTR
Exon/CDS
Intron
Rh7CG508100.1

Sequence Viewer

Length: 213 bp
ATGCAGTTAAGTTACTGTACAGGCTCTCAAGTCTGGCAGACCGTTGCAGTAGTGTTATGCGTGTATTCTGGTTTGTCTAGTTTGTGGCTTTGGACGACGAAACAATCAATCTGTAGACTTGGTTTTCATGTTTGGAAACTGAGTACAGGACTACAGGTGAATCCGGATCCAGAGGATGTTCATTGTTACTTTGTTAGTTATGAATCAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

70

Amino Acids

7.98

Weight (kDa)

5.98

Isoelectric Point (pI)

37.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 115
AccIII TCCGGA 1 cut(s) 163
AclWI GGATC 2 cut(s) 161, 174
AfaI GTAC 2 cut(s) 19, 145
AlwI GGATC 2 cut(s) 161, 174
Aor13HI TCCGGA 1 cut(s) 163
AsuHPI GGTGA 1 cut(s) 169
BamHI GGATCC 1 cut(s) 166
BfaI CTAG 1 cut(s) 78
BfmI CTRYAG 2 cut(s) 112, 152
BmiI GGNNCC 1 cut(s) 168
BpuEI CTTGAG 1 cut(s) 12
BsaWI WCCGGW 1 cut(s) 163
BseAI TCCGGA 1 cut(s) 163
BseGI GGATG 1 cut(s) 181
BseMII CTCAG 1 cut(s) 131
BsiSI CCGG 1 cut(s) 164
Bsp13I TCCGGA 1 cut(s) 163
Bsp1407I TGTACA 1 cut(s) 17
Bsp143I GATC 1 cut(s) 166
BspCNI CTCAG 1 cut(s) 132
BspEI TCCGGA 1 cut(s) 163
BspLI GGNNCC 1 cut(s) 168
BspPI GGATC 2 cut(s) 161, 174
BsrGI TGTACA 1 cut(s) 17
BssMI GATC 1 cut(s) 166
Bst4CI ACNGT 2 cut(s) 17, 43
BstAUI TGTACA 1 cut(s) 17
BstDEI CTNAG 1 cut(s) 140
BstF5I GGATG 1 cut(s) 181
BstKTI GATC 1 cut(s) 169
BstMBI GATC 1 cut(s) 166
BstSFI CTRYAG 2 cut(s) 112, 152
BstX2I RGATCY 1 cut(s) 166
BstYI RGATCY 1 cut(s) 166
BtsCI GGATG 1 cut(s) 181
Csp6I GTAC 2 cut(s) 18, 144
CviAII CATG 1 cut(s) 128
CviJI RGCY 2 cut(s) 24, 88
CviKI_1 RGCY 2 cut(s) 24, 88
CviQI GTAC 2 cut(s) 18, 144
DdeI CTNAG 1 cut(s) 140
DpnI GATC 1 cut(s) 168
DpnII GATC 1 cut(s) 166
FaeI CATG 1 cut(s) 131
FaiI YATR 3 cut(s) 58, 129, 201
FatI CATG 1 cut(s) 127
FblI GTMKAC 1 cut(s) 115
FokI GGATG 1 cut(s) 188
FspBI CTAG 1 cut(s) 78
HapII CCGG 1 cut(s) 164
Hin1II CATG 1 cut(s) 131
HinfI GANTC 2 cut(s) 160, 203
HpaII CCGG 1 cut(s) 164
HphI GGTGA 1 cut(s) 169
Hpy166II GTNNAC 1 cut(s) 116
Hpy188III TCNNGA 2 cut(s) 164, 170
Hpy8I GTNNAC 1 cut(s) 116
Hpy99I CGWCG 1 cut(s) 100
HpyCH4III ACNGT 2 cut(s) 17, 43
HpyCH4V TGCA 2 cut(s) 4, 47
HpyF3I CTNAG 1 cut(s) 140
Hsp92II CATG 1 cut(s) 131
Kpn2I TCCGGA 1 cut(s) 163
Kzo9I GATC 1 cut(s) 166
LpnPI CCDG 7 cut(s) 6, 19, 54, 132, 140, 177, 183
MaeI CTAG 1 cut(s) 78
MaeIII GTNAC 2 cut(s) 11, 185
MalI GATC 1 cut(s) 168
MboI GATC 1 cut(s) 166
MflI RGATCY 1 cut(s) 166
MnlI CCTC 1 cut(s) 166
MroI TCCGGA 1 cut(s) 163
MseI TTAA 1 cut(s) 8
MspI CCGG 1 cut(s) 164
NdeII GATC 1 cut(s) 166
NlaIII CATG 1 cut(s) 131
NlaIV GGNNCC 1 cut(s) 168
PfeI GAWTC 2 cut(s) 160, 203
PspN4I GGNNCC 1 cut(s) 168
PsuI RGATCY 1 cut(s) 166
RsaI GTAC 2 cut(s) 19, 145
RsaNI GTAC 2 cut(s) 18, 144
SaqAI TTAA 1 cut(s) 8
Sau3AI GATC 1 cut(s) 166
SetI ASST 1 cut(s) 159
SfcI CTRYAG 2 cut(s) 112, 152
SmlI CTYRAG 1 cut(s) 27
SmoI CTYRAG 1 cut(s) 27
SspMI CTAG 1 cut(s) 78
TaaI ACNGT 2 cut(s) 17, 43
TatI WGTACW 2 cut(s) 17, 143
TfiI GAWTC 2 cut(s) 160, 203
Tru1I TTAA 1 cut(s) 8
Tru9I TTAA 1 cut(s) 8
TspDTI ATGAA 2 cut(s) 116, 170
XmiI GTMKAC 1 cut(s) 115
XspI CTAG 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.