AT1G60690

aldo-keto reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000435
Physical Location & Seq
Reverse (-)
22349759 .. 22351780
2022 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G60690.1

Sequence Viewer

Length: 1038 bp
ATGGCGGAATCTTGCAGAGTGAGGAGGATAAAGCTAGGAAGTCAAGGCCTAGAGGTATCGGCGCAAGGCCTTGGTTGCATGGGACTCACCGGTCATTACGGTGCTTCCAAGCCGGAAACTGAAGCCATCGCTCTCATCCACCACGCTATTCACTCCGGTGTTACTTTCCTTGACACTTCTGACATGTATGGTCCTGAAACCAATGAAATTCTCCTCGGAAAGGCTCTTAAGGATGGTGTGAGGGAGAAAGTGGAGCTTGCGACCAAATTTGGAATCAGTTATGCAGAGGGAAACAGAGAGATTAAGGGAGATCCTGCTTATGTTAGAGCTGCCTGTGAGGCTAGTTTAAAGAGACTAGATGTTACCTGCATTGATCTGTATTATCAGCATCGGATTGATACTCGTGTTCCTATTGAAATCACTATGGGAGAACTGAAGAAGCTAATTGAAGAGGGTAAAATAAAGTACATAGGTTTGTCTGAGGCCTCTGCCTCAACTATCAGAAGAGCGCATACTGTTCACCCAATCACCGCCGTGCAGTTAGAGTGGTCCTTGTGGACAAGAGACGTGGAAGAAGAAATTGTCCCAACCTGCAGGGAACTTGGAATTGGGATTGTTTCTTACAGTCCTCTAGGAAGAGGTTTCTTTGCATCAGGACCTAAGCTTGTTGAGAACCTAGACAATAATGACTTCAGAAAGGCTCTACCAAGATTCCAACAGGAAAACTTGGATCACAACAAGATTCTCTATGAGAAAGTTTCTGCAATGTCTGAGAAGAAAGGGTGCACTCCCGCACAACTAGCCCTCGCTTGGGTTCACCACCAGGGAGATGATGTTTGTCCCATTCCAGGAACCACTAAGATTGAAAACCTCAACCAGAACATTAGAGCTTTATCAGTGAAACTCACTCCTGAAGAGATGTCTGAGCTTGAGACCATTGCCCAACCAGAGTCTGTGAAAGGAGAAAGATACATGGCCACAGTGCCAACCTTCAAAAACTCCGACACTCCACCATTGTCTTCTTGGAATGCTGTGTAA

Protein Analysis

345

Amino Acids

38.16

Weight (kDa)

5.98

Isoelectric Point (pI)

41.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 23 - 313 8.3e-70 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000435)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10810 AT1G10810 AT1G60680 AT1G60690 AT1G60710 AT1G60730 AT1G60730 AT1G60750
fragaria_vesca FvH4_4g12490
malus_domestica MD04G1026100.v1.1 MD09G1032900.v1.1 MD13G1279900.v1.1
prunus_persica Prupe.1G175500_v2.0.a1 Prupe.1G175600_v2.0.a1 Prupe.1G175700_v2.0.a1 Prupe.1G175800_v2.0.a1 Prupe.2G050800_v2.0.a1
pyrus_communis pycom04g02210 pycom04g02230 pycom111g02620 pycom13g29370
rosa_chinensis RchiOBHm_Chr4g0409691 RchiOBHm_Chr4g0410671 RchiOBHm_Chr4g0410821 RchiOBHm_Chr4g0411011 RchiOBHm_Chr4g0411051 RchiOBHm_Chr4g0411101 RchiOBHm_Chr4g0411151 RchiOBHm_Chr4g0411171 RchiOBHm_Chr4g0411201
rosa_laevigata RLG00000008369 RLG00000008372 RLG00000008374 RLG00000008376 RLG00000008378 RLG00000008381 RLG00000008383 RLG00000008395
rosa_multiflora Rmu_co8497103.1_g000001 Rmu_co8514481.1_g000001 Rmu_sc0000543.1_g000005 Rmu_sc0000543.1_g000006 Rmu_sc0000543.1_g000024 Rmu_sc0000944.1_g000002 Rmu_sc0000944.1_g000011 Rmu_sc0001244.1_g000006 Rmu_sc0001244.1_g000014 Rmu_sc0001244.1_g000017 Rmu_sc0001244.1_g000020 Rmu_sc0003150.1_g000001 Rmu_sc0007879.1_g000001 Rmu_sc0007879.1_g000007 Rmu_sc0009499.1_g000008 Rmu_sc0029727.1_g000001
rosa_roxburghii Rroxscaffold_5G00354230 Rroxscaffold_5G00355560 Rroxscaffold_5G00355580 Rroxscaffold_5G00355600 Rroxscaffold_5G00355650 Rroxscaffold_5G00355710 Rroxscaffold_5G00355730 Rroxscaffold_5G00355760 Rroxscaffold_5G00355800 Rroxscaffold_5G00355840 Rroxscaffold_5G00355850
rosa_rugosa Rorug04G0096400 Rorug04G0105400 Rorug04G0110600 Rorug04G0110700 Rorug05G0412600 Rorug07G0180500
rosa_samantha Rh4AG157500 Rh4BG162500 Rh4BG163400 Rh4CG175300 Rh4CG176100 Rh4CG177100 Rh4CG177200 Rh4CG177400 Rh4CG177500 Rh4CG178000 Rh4CG178100 Rh4CG178300 Rh4DG159900 Rh4DG160200
rosa_wichuraiana Rw4G013600 Rw4G013610 Rw4G013660 Rw4G013690 Rw4G013700 Rw4G013710 Rw4G013720 Rw4G013730 Rw4G013740 Rw4G013750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 90
Acc36I ACCTGC 2 cut(s) 374, 599
AciI CCGC 3 cut(s) 5, 531, 792
AclWI GGATC 2 cut(s) 305, 738
AcoI YGGCCR 1 cut(s) 975
AcsI RAATTY 2 cut(s) 207, 266
AcuI CTGAAG 4 cut(s) 141, 455, 676, 933
AfaI GTAC 1 cut(s) 467
AfiI CCNNNNNNNGG 4 cut(s) 220, 810, 811, 848
AflII CTTAAG 1 cut(s) 227
AflIII ACRYGT 1 cut(s) 183
AgeI ACCGGT 1 cut(s) 89
AgsI TTSAA 4 cut(s) 416, 449, 866, 994
AjiI CACGTC 1 cut(s) 568
AjnI CCWGG 2 cut(s) 822, 847
AjuI GAANNNNNNNTTGG 2 cut(s) 591, 623
AleI CACNNNNGTG 2 cut(s) 156, 533
AluBI AGCT 7 cut(s) 34, 256, 329, 442, 664, 890, 928
AluI AGCT 7 cut(s) 34, 256, 329, 442, 664, 890, 928
Alw21I GWGCWC 1 cut(s) 788
Alw26I GTCTC 3 cut(s) 346, 558, 926
Alw44I GTGCAC 1 cut(s) 784
AlwI GGATC 2 cut(s) 305, 738
AlwNI CAGNNNCTG 1 cut(s) 953
AoxI GGCC 4 cut(s) 46, 67, 483, 975
ApaLI GTGCAC 1 cut(s) 784
ApeKI GCWGC 1 cut(s) 329
ApoI RAATTY 2 cut(s) 207, 266
AsiGI ACCGGT 1 cut(s) 89
AspLEI GCGC 2 cut(s) 64, 511
AspS9I GGNCC 3 cut(s) 191, 549, 656
AsuHPI GGTGA 4 cut(s) 79, 512, 520, 809
AvaII GGWCC 3 cut(s) 191, 549, 656
BaeGI GKGCMC 1 cut(s) 788
BaeI ACNNNNGTAYC 2 cut(s) 390, 423
BalI TGGCCA 1 cut(s) 977
BarI GAAGNNNNNNTAC 2 cut(s) 496, 528
BauI CACGAG 1 cut(s) 402
BbsI GAAGAC 1 cut(s) 1011
Bbv12I GWGCWC 1 cut(s) 788
BbvI GCAGC 1 cut(s) 316
BccI CCATC 2 cut(s) 134, 227
BceAI ACGGC 1 cut(s) 518
BciT130I CCWGG 2 cut(s) 824, 849
BcoDI GTCTC 3 cut(s) 346, 558, 926
BfaI CTAG 7 cut(s) 35, 50, 342, 356, 632, 677, 800
BfmI CTRYAG 1 cut(s) 592
BfrI CTTAAG 1 cut(s) 227
BfuAI ACCTGC 2 cut(s) 374, 599
BglI GCCNNNNNGGC 1 cut(s) 338
BisI GCNGC 1 cut(s) 330
BlsI GCNGC 1 cut(s) 331
Bme1390I CCNGG 2 cut(s) 824, 849
Bme18I GGWCC 3 cut(s) 191, 549, 656
BmgBI CACGTC 1 cut(s) 568
BmgT120I GGNCC 3 cut(s) 191, 549, 656
BmiI GGNNCC 1 cut(s) 853
BmrFI CCNGG 2 cut(s) 824, 849
BmsI GCATC 2 cut(s) 397, 659
BpiI GAAGAC 1 cut(s) 1011
Bpu10I CCTNAGC 1 cut(s) 660
BpuEI CTTGAG 1 cut(s) 950
BsaI GGTCTC 1 cut(s) 926
BsaJI CCNNGG 3 cut(s) 70, 214, 823
BsaWI WCCGGW 2 cut(s) 89, 155
BsaXI ACNNNNNCTCC 2 cut(s) 819, 849
Bsc4I CCNNNNNNNGG 4 cut(s) 220, 810, 811, 848
Bse118I RCCGGY 1 cut(s) 89
Bse3DI GCAATG 2 cut(s) 771, 936
BseBI CCWGG 2 cut(s) 824, 849
BseDI CCNNGG 3 cut(s) 70, 214, 823
BseGI GGATG 2 cut(s) 135, 238
BseLI CCNNNNNNNGG 4 cut(s) 220, 810, 811, 848
BseMI GCAATG 2 cut(s) 771, 936
BseMII CTCAG 3 cut(s) 471, 762, 915
BseRI GAGGAG 2 cut(s) 37, 203
BseSI GKGCMC 1 cut(s) 788
BseXI GCAGC 1 cut(s) 316
BsgI GTGCAG 1 cut(s) 557
BshFI GGCC 4 cut(s) 48, 69, 485, 977
BshTI ACCGGT 1 cut(s) 89
BsiHKAI GWGCWC 1 cut(s) 788
BsiSI CCGG 3 cut(s) 90, 113, 156
BslFI GGGAC 3 cut(s) 96, 569, 825
BslI CCNNNNNNNGG 4 cut(s) 220, 810, 811, 848
BsmAI GTCTC 3 cut(s) 346, 558, 926
BsmBI CGTCTC 1 cut(s) 558
BsmFI GGGAC 3 cut(s) 96, 569, 825
BsmI GAATGC 1 cut(s) 1033
BsnI GGCC 4 cut(s) 48, 69, 485, 977
Bso31I GGTCTC 1 cut(s) 926
Bsp1286I GDGCHC 1 cut(s) 788
Bsp143I GATC 3 cut(s) 310, 373, 730
BspACI CCGC 3 cut(s) 5, 531, 792
BspANI GGCC 4 cut(s) 48, 69, 485, 977
BspCNI CTCAG 3 cut(s) 472, 763, 916
BspLI GGNNCC 1 cut(s) 853
BspMAI CTGCAG 1 cut(s) 596
BspMI ACCTGC 2 cut(s) 374, 599
BspPI GGATC 2 cut(s) 305, 738
BspQI GCTCTTC 1 cut(s) 499
BspTI CTTAAG 1 cut(s) 227
BspTNI GGTCTC 1 cut(s) 926
BsrDI GCAATG 2 cut(s) 771, 936
BsrFI RCCGGY 1 cut(s) 89
BssAI RCCGGY 1 cut(s) 89
BssECI CCNNGG 3 cut(s) 70, 214, 823
BssMI GATC 3 cut(s) 310, 373, 730
BssSI CACGAG 1 cut(s) 402
BssT1I CCWWGG 1 cut(s) 70
Bst2BI CACGAG 1 cut(s) 402
Bst2UI CCWGG 2 cut(s) 824, 849
Bst4CI ACNGT 4 cut(s) 101, 517, 626, 982
Bst6I CTCTTC 4 cut(s) 444, 499, 631, 909
BstAFI CTTAAG 1 cut(s) 227
BstC8I GCNNGC 1 cut(s) 258
BstDEI CTNAG 5 cut(s) 480, 660, 771, 858, 924
BstENI CCTNNNNNAGG 1 cut(s) 218
BstF5I GGATG 2 cut(s) 135, 238
BstHHI GCGC 2 cut(s) 64, 511
BstKTI GATC 3 cut(s) 313, 376, 733
BstMAI GTCTC 3 cut(s) 346, 558, 926
BstMBI GATC 3 cut(s) 310, 373, 730
BstMWI GCNNNNNNNGC 3 cut(s) 75, 338, 800
BstNI CCWGG 2 cut(s) 824, 849
BstNSI RCATGY 1 cut(s) 187
BstSCI CCNGG 2 cut(s) 822, 847
BstSFI CTRYAG 1 cut(s) 592
BstSLI GKGCMC 1 cut(s) 788
BstV1I GCAGC 1 cut(s) 316
BstV2I GAAGAC 1 cut(s) 1011
BstX2I RGATCY 1 cut(s) 310
BstYI RGATCY 1 cut(s) 310
BsuRI GGCC 4 cut(s) 48, 69, 485, 977
BtgZI GCGATG 1 cut(s) 112
BtrI CACGTC 1 cut(s) 568
BtsCI GGATG 2 cut(s) 135, 238
BtsIMutI CAGTG 2 cut(s) 903, 987
BveI ACCTGC 2 cut(s) 374, 599
Cac8I GCNNGC 1 cut(s) 258
CaiI CAGNNNCTG 1 cut(s) 953
CfoI GCGC 2 cut(s) 64, 511
Cfr10I RCCGGY 1 cut(s) 89
Cfr13I GGNCC 3 cut(s) 191, 549, 656
Csp6I GTAC 1 cut(s) 466
CspAI ACCGGT 1 cut(s) 89
CspCI CAANNNNNGTGG 4 cut(s) 549, 584, 844, 879
CviAII CATG 3 cut(s) 79, 184, 973
CviQI GTAC 1 cut(s) 466
DdeI CTNAG 5 cut(s) 480, 660, 771, 858, 924
DpnI GATC 3 cut(s) 312, 375, 732
DpnII GATC 3 cut(s) 310, 373, 730
DraI TTTAAA 1 cut(s) 348
DrdI GACNNNNNNGTC 1 cut(s) 90
DseDI GACNNNNNNGTC 1 cut(s) 90
EaeI YGGCCR 1 cut(s) 975
Eam1104I CTCTTC 4 cut(s) 444, 499, 631, 909
EarI CTCTTC 4 cut(s) 444, 499, 631, 909
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 70
Eco147I AGGCCT 3 cut(s) 48, 69, 485
Eco31I GGTCTC 1 cut(s) 926
Eco47I GGWCC 3 cut(s) 191, 549, 656
Eco57I CTGAAG 4 cut(s) 141, 455, 676, 933
EcoNI CCTNNNNNAGG 1 cut(s) 218
EcoO109I RGGNCCY 1 cut(s) 656
EcoRII CCWGG 2 cut(s) 822, 847
EcoT14I CCWWGG 1 cut(s) 70
ErhI CCWWGG 1 cut(s) 70
Esp3I CGTCTC 1 cut(s) 558
FaeI CATG 3 cut(s) 82, 187, 976
FalI AAGNNNNNCTT 2 cut(s) 240, 272
FaqI GGGAC 3 cut(s) 96, 569, 825
FatI CATG 3 cut(s) 78, 183, 972
FauI CCCGC 1 cut(s) 799
Fnu4HI GCNGC 1 cut(s) 330
FokI GGATG 2 cut(s) 122, 245
Fsp4HI GCNGC 1 cut(s) 330
FspBI CTAG 7 cut(s) 35, 50, 342, 356, 632, 677, 800
GlaI GCGC 2 cut(s) 63, 510
GluI GCNGC 1 cut(s) 330
HaeIII GGCC 4 cut(s) 48, 69, 485, 977
HapII CCGG 3 cut(s) 90, 113, 156
HhaI GCGC 2 cut(s) 64, 511
Hin1II CATG 3 cut(s) 82, 187, 976
Hin6I GCGC 2 cut(s) 62, 509
HinP1I GCGC 2 cut(s) 62, 509
HindIII AAGCTT 1 cut(s) 662
HinfI GANTC 6 cut(s) 8, 84, 273, 711, 742, 950
HpaII CCGG 3 cut(s) 90, 113, 156
HphI GGTGA 4 cut(s) 79, 512, 520, 809
Hpy166II GTNNAC 4 cut(s) 520, 558, 786, 817
Hpy188I TCNGA 9 cut(s) 181, 218, 393, 481, 503, 695, 772, 925, 1003
Hpy188III TCNNGA 3 cut(s) 194, 654, 911
Hpy8I GTNNAC 4 cut(s) 520, 558, 786, 817
HpyAV CCTTC 1 cut(s) 1000
HpyCH4III ACNGT 4 cut(s) 101, 517, 626, 982
HpyCH4IV ACGT 1 cut(s) 567
HpyCH4V TGCA 9 cut(s) 15, 78, 284, 369, 538, 594, 650, 764, 786
HpyF10VI GCNNNNNNNGC 3 cut(s) 75, 338, 800
HpyF3I CTNAG 5 cut(s) 480, 660, 771, 858, 924
HpySE526I ACGT 1 cut(s) 567
Hsp92II CATG 3 cut(s) 82, 187, 976
HspAI GCGC 2 cut(s) 62, 509
Kzo9I GATC 3 cut(s) 310, 373, 730
LguI GCTCTTC 1 cut(s) 499
LmnI GCTCC 1 cut(s) 253
Lsp1109I GCAGC 1 cut(s) 316
LweI GCATC 2 cut(s) 397, 659
MaeI CTAG 7 cut(s) 35, 50, 342, 356, 632, 677, 800
MaeII ACGT 1 cut(s) 567
MaeIII GTNAC 2 cut(s) 160, 361
MalI GATC 3 cut(s) 312, 375, 732
MboI GATC 3 cut(s) 310, 373, 730
MboII GAAGA 9 cut(s) 448, 461, 516, 584, 587, 648, 787, 926, 1011
MflI RGATCY 1 cut(s) 310
MhlI GDGCHC 1 cut(s) 788
MlsI TGGCCA 1 cut(s) 977
MluCI AATT 5 cut(s) 207, 266, 444, 579, 606
MluNI TGGCCA 1 cut(s) 977
MlyI GAGTC 2 cut(s) 78, 959
MmeI TCCRAC 2 cut(s) 739, 1026
Mox20I TGGCCA 1 cut(s) 977
MscI TGGCCA 1 cut(s) 977
MseI TTAA 3 cut(s) 228, 303, 347
MslI CAYNNNNRTG 3 cut(s) 99, 156, 533
Msp20I TGGCCA 1 cut(s) 977
MspCI CTTAAG 1 cut(s) 227
MspI CCGG 3 cut(s) 90, 113, 156
MspR9I CCNGG 2 cut(s) 824, 849
Mva1269I GAATGC 1 cut(s) 1033
MvaI CCWGG 2 cut(s) 824, 849
MwoI GCNNNNNNNGC 3 cut(s) 75, 338, 800
NdeII GATC 3 cut(s) 310, 373, 730
NlaIII CATG 3 cut(s) 82, 187, 976
NlaIV GGNNCC 1 cut(s) 853
NspI RCATGY 1 cut(s) 187
OliI CACNNNNGTG 2 cut(s) 156, 533
PceI AGGCCT 3 cut(s) 48, 69, 485
PciI ACATGT 1 cut(s) 183
PciSI GCTCTTC 1 cut(s) 499
PctI GAATGC 1 cut(s) 1033
PfeI GAWTC 4 cut(s) 8, 273, 711, 742
PfoI TCCNGGA 1 cut(s) 847
PinAI ACCGGT 1 cut(s) 89
PkrI GCNGC 1 cut(s) 331
PleI GAGTC 2 cut(s) 78, 958
PpsI GAGTC 2 cut(s) 78, 958
PpuMI RGGWCCY 1 cut(s) 656
PscI ACATGT 1 cut(s) 183
Psp5II RGGWCCY 1 cut(s) 656
Psp6I CCWGG 2 cut(s) 822, 847
PspGI CCWGG 2 cut(s) 822, 847
PspN4I GGNNCC 1 cut(s) 853
PspPI GGNCC 3 cut(s) 191, 549, 656
PspPPI RGGWCCY 1 cut(s) 656
PstI CTGCAG 1 cut(s) 596
PstNI CAGNNNCTG 1 cut(s) 953
PsuI RGATCY 1 cut(s) 310
RsaI GTAC 1 cut(s) 467
RsaNI GTAC 1 cut(s) 466
RseI CAYNNNNRTG 3 cut(s) 99, 156, 533
SapI GCTCTTC 1 cut(s) 499
SaqAI TTAA 3 cut(s) 228, 303, 347
SatI GCNGC 1 cut(s) 330
Sau3AI GATC 3 cut(s) 310, 373, 730
Sau96I GGNCC 3 cut(s) 191, 549, 656
SbfI CCTGCAGG 1 cut(s) 596
SchI GAGTC 2 cut(s) 78, 959
ScrFI CCNGG 2 cut(s) 824, 849
SdaI CCTGCAGG 1 cut(s) 596
SduI GDGCHC 1 cut(s) 788
SfaNI GCATC 2 cut(s) 397, 659
SfcI CTRYAG 1 cut(s) 592
SinI GGWCC 3 cut(s) 191, 549, 656
SmiMI CAYNNNNRTG 3 cut(s) 99, 156, 533
SmlI CTYRAG 2 cut(s) 227, 929
SmoI CTYRAG 2 cut(s) 227, 929
Sse8387I CCTGCAGG 1 cut(s) 596
Sse9I AATT 5 cut(s) 207, 266, 444, 579, 606
SseBI AGGCCT 3 cut(s) 48, 69, 485
SsiI CCGC 3 cut(s) 5, 531, 792
SspMI CTAG 7 cut(s) 35, 50, 342, 356, 632, 677, 800
StuI AGGCCT 3 cut(s) 48, 69, 485
StyD4I CCNGG 2 cut(s) 822, 847
StyI CCWWGG 1 cut(s) 70
TaaI ACNGT 4 cut(s) 101, 517, 626, 982
TaiI ACGT 1 cut(s) 570
TasI AATT 5 cut(s) 207, 266, 444, 579, 606
TatI WGTACW 1 cut(s) 465
TfiI GAWTC 4 cut(s) 8, 273, 711, 742
Tru1I TTAA 3 cut(s) 228, 303, 347
Tru9I TTAA 3 cut(s) 228, 303, 347
TscAI CASTG 2 cut(s) 903, 987
TseI GCWGC 1 cut(s) 329
TspDTI ATGAA 1 cut(s) 219
TspRI CASTG 2 cut(s) 903, 987
Vha464I CTTAAG 1 cut(s) 227
VneI GTGCAC 1 cut(s) 784
VpaK11BI GGWCC 3 cut(s) 191, 549, 656
XagI CCTNNNNNAGG 1 cut(s) 218
XapI RAATTY 2 cut(s) 207, 266
XceI RCATGY 1 cut(s) 187
XcmI CCANNNNNNNNNTGG 1 cut(s) 1020
XspI CTAG 7 cut(s) 35, 50, 342, 356, 632, 677, 800
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.