AT1G60750

aldo-keto reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000435
Physical Location & Seq
Reverse (-)
22362293 .. 22363854
1562 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G60750.1

Sequence Viewer

Length: 993 bp
ATGGCAGAGGAAGCTTGTCAAGTGCGTAGGATGAAGTTAGGGAGTCAAGGTCTTGAGGTTTCGGCTCAGGGACTTGGCTGCATGGGTCTCTCCGACTTTTACGGTGCTCCGACACCTGAGACTAACGCCGTCGCTCTCCTCCGTCACGCCATCAACGCTGGGGTCACATTTCTCGATACCTCCGACATCTACGGTCCCGAGACAAACGAGCTGCTTCTTGGAAAGGCTTTGAAAGATGGTTTGAGAGATAAAGTGGAATTAGCGACAAAGTTTGGGATCACTGCTTCTGAAGATGGAAAATTTGGTTTCAGGGGAGATCCAGAGTATGTAAGGATTGCTTGTGAAGCAAGCTTAAAGCGTCTTGGTGTAACCTGCATTGATCTTTATTACCAGCATCGAATTGATACCACTCTGCCCATCGAAATCACGATTGGAGAGCTGAAGAAGCTAGTTGAAGAAGGCAAAATAAAGTACATCGGTTTGTCAGAAGCTTCGGCTTCAACTATAAGAAGAGCACATGCTGTTCACCCGATAACCGCTGTGCAAATAGAATGGTCCTTATGGTCGAGAGACGTGGAAGAAGATATCATTCCAACCTGCAGGGAACTTGGGATTGGAATTGTAGCTTATAGCCCTCTAGGAAGAGGCTTCTTAGGTTTACCAAGATTCCAACAGGAGAATCTAGAAAACAACAAGATTCTCTACGAGAAAGTCCAAGCGATGGCGACAAAGAAAAGTTGCACTCCTGCACAACTAGCTCTAGCGTGGGTTCACCATCAAGGAGATGATGTATGTCCAATTCCAGGAACCTCCAAGATCCAAAACCTCAACCAAAACATTGGAGCTTTATCCGTGAAGCTCACTCCTGAAGAGATGGTTGAGCTTGAAGCCATTGCTCAACCGGATTTCGTGAAAGGTGAACGGTATGACAACAACATGGTTACTTACAAAGACTCAGAGACTCCACCATTGTCTTCTTGGAAAGCAAGATAA

Protein Analysis

330

Amino Acids

36.35

Weight (kDa)

5.43

Isoelectric Point (pI)

35.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 24 - 299 1.6e-68 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000435)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10810 AT1G10810 AT1G60680 AT1G60690 AT1G60710 AT1G60730 AT1G60730 AT1G60750
fragaria_vesca FvH4_4g12490
malus_domestica MD04G1026100.v1.1 MD09G1032900.v1.1 MD13G1279900.v1.1
prunus_persica Prupe.1G175500_v2.0.a1 Prupe.1G175600_v2.0.a1 Prupe.1G175700_v2.0.a1 Prupe.1G175800_v2.0.a1 Prupe.2G050800_v2.0.a1
pyrus_communis pycom04g02210 pycom04g02230 pycom111g02620 pycom13g29370
rosa_chinensis RchiOBHm_Chr4g0409691 RchiOBHm_Chr4g0410671 RchiOBHm_Chr4g0410821 RchiOBHm_Chr4g0411011 RchiOBHm_Chr4g0411051 RchiOBHm_Chr4g0411101 RchiOBHm_Chr4g0411151 RchiOBHm_Chr4g0411171 RchiOBHm_Chr4g0411201
rosa_laevigata RLG00000008369 RLG00000008372 RLG00000008374 RLG00000008376 RLG00000008378 RLG00000008381 RLG00000008383 RLG00000008395
rosa_multiflora Rmu_co8497103.1_g000001 Rmu_co8514481.1_g000001 Rmu_sc0000543.1_g000005 Rmu_sc0000543.1_g000006 Rmu_sc0000543.1_g000024 Rmu_sc0000944.1_g000002 Rmu_sc0000944.1_g000011 Rmu_sc0001244.1_g000006 Rmu_sc0001244.1_g000014 Rmu_sc0001244.1_g000017 Rmu_sc0001244.1_g000020 Rmu_sc0003150.1_g000001 Rmu_sc0007879.1_g000001 Rmu_sc0007879.1_g000007 Rmu_sc0009499.1_g000008 Rmu_sc0029727.1_g000001
rosa_roxburghii Rroxscaffold_5G00354230 Rroxscaffold_5G00355560 Rroxscaffold_5G00355580 Rroxscaffold_5G00355600 Rroxscaffold_5G00355650 Rroxscaffold_5G00355710 Rroxscaffold_5G00355730 Rroxscaffold_5G00355760 Rroxscaffold_5G00355800 Rroxscaffold_5G00355840 Rroxscaffold_5G00355850
rosa_rugosa Rorug04G0096400 Rorug04G0105400 Rorug04G0110600 Rorug04G0110700 Rorug05G0412600 Rorug07G0180500
rosa_samantha Rh4AG157500 Rh4BG162500 Rh4BG163400 Rh4CG175300 Rh4CG176100 Rh4CG177100 Rh4CG177200 Rh4CG177400 Rh4CG177500 Rh4CG178000 Rh4CG178100 Rh4CG178300 Rh4DG159900 Rh4DG160200
rosa_wichuraiana Rw4G013600 Rw4G013610 Rw4G013660 Rw4G013690 Rw4G013700 Rw4G013710 Rw4G013720 Rw4G013730 Rw4G013740 Rw4G013750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 380, 605
AccB7I CCANNNNNTGG 1 cut(s) 721
AciI CCGC 1 cut(s) 537
AclWI GGATC 3 cut(s) 284, 311, 811
AcsI RAATTY 1 cut(s) 299
AcuI CTGAAG 3 cut(s) 309, 461, 888
AfaI GTAC 1 cut(s) 473
AfiI CCNNNNNNNGG 2 cut(s) 721, 803
AgsI TTSAA 4 cut(s) 232, 455, 501, 887
AjiI CACGTC 1 cut(s) 574
AjnI CCWGG 1 cut(s) 802
AjuI GAANNNNNNNTTGG 4 cut(s) 414, 446, 597, 629
Alw21I GWGCWC 2 cut(s) 109, 517
Alw26I GTCTC 5 cut(s) 92, 113, 194, 564, 953
AlwI GGATC 3 cut(s) 284, 311, 811
Ama87I CYCGRG 1 cut(s) 197
ApeKI GCWGC 2 cut(s) 78, 211
ApoI RAATTY 1 cut(s) 299
AspS9I GGNCC 2 cut(s) 194, 555
AsuHPI GGTGA 3 cut(s) 518, 764, 929
AvaI CYCGRG 1 cut(s) 197
AvaII GGWCC 2 cut(s) 194, 555
BbsI GAAGAC 1 cut(s) 966
Bbv12I GWGCWC 2 cut(s) 109, 517
BbvI GCAGC 2 cut(s) 65, 198
BccI CCATC 7 cut(s) 158, 230, 287, 425, 715, 783, 868
BceAI ACGGC 1 cut(s) 113
BciT130I CCWGG 1 cut(s) 804
BcoDI GTCTC 5 cut(s) 92, 113, 194, 564, 953
BfaI CTAG 5 cut(s) 449, 638, 683, 755, 761
BfmI CTRYAG 1 cut(s) 598
BfuAI ACCTGC 2 cut(s) 380, 605
BisI GCNGC 2 cut(s) 79, 212
BlsI GCNGC 2 cut(s) 80, 213
Bme1390I CCNGG 1 cut(s) 804
Bme18I GGWCC 2 cut(s) 194, 555
BmeT110I CYCGRG 1 cut(s) 197
BmgBI CACGTC 1 cut(s) 574
BmgT120I GGNCC 2 cut(s) 194, 555
BmiI GGNNCC 2 cut(s) 196, 808
BmrFI CCNGG 1 cut(s) 804
BmsI GCATC 1 cut(s) 403
BpiI GAAGAC 1 cut(s) 966
Bpu10I CCTNAGC 1 cut(s) 66
BpuEI CTTGAG 1 cut(s) 74
BsaI GGTCTC 1 cut(s) 92
BsaWI WCCGGW 1 cut(s) 901
BsaXI ACNNNNNCTCC 4 cut(s) 34, 64, 774, 804
Bsc4I CCNNNNNNNGG 2 cut(s) 721, 803
Bse3DI GCAATG 1 cut(s) 891
BseBI CCWGG 1 cut(s) 804
BseGI GGATG 1 cut(s) 36
BseLI CCNNNNNNNGG 2 cut(s) 721, 803
BseMI GCAATG 1 cut(s) 891
BseMII CTCAG 3 cut(s) 80, 108, 969
BseRI GAGGAG 1 cut(s) 128
BseXI GCAGC 2 cut(s) 65, 198
BseYI CCCAGC 1 cut(s) 158
BsgI GTGCAG 1 cut(s) 732
BsiHKAI GWGCWC 2 cut(s) 109, 517
BsiHKCI CYCGRG 1 cut(s) 197
BsiSI CCGG 1 cut(s) 902
BslFI GGGAC 2 cut(s) 84, 180
BslI CCNNNNNNNGG 2 cut(s) 721, 803
BsmAI GTCTC 5 cut(s) 92, 113, 194, 564, 953
BsmBI CGTCTC 1 cut(s) 564
BsmFI GGGAC 2 cut(s) 84, 180
Bso31I GGTCTC 1 cut(s) 92
BsoBI CYCGRG 1 cut(s) 197
Bsp1286I GDGCHC 2 cut(s) 109, 517
Bsp143I GATC 4 cut(s) 276, 316, 379, 816
BspACI CCGC 1 cut(s) 537
BspCNI CTCAG 3 cut(s) 79, 109, 968
BspLI GGNNCC 2 cut(s) 196, 808
BspMAI CTGCAG 1 cut(s) 602
BspMI ACCTGC 2 cut(s) 380, 605
BspPI GGATC 3 cut(s) 284, 311, 811
BspQI GCTCTTC 1 cut(s) 505
BspTNI GGTCTC 1 cut(s) 92
BsrDI GCAATG 1 cut(s) 891
BssMI GATC 4 cut(s) 276, 316, 379, 816
Bst2UI CCWGG 1 cut(s) 804
Bst4CI ACNGT 3 cut(s) 104, 194, 924
Bst6I CTCTTC 3 cut(s) 505, 637, 864
BstC8I GCNNGC 1 cut(s) 349
BstDEI CTNAG 4 cut(s) 66, 117, 652, 955
BstF5I GGATG 1 cut(s) 36
BstKTI GATC 4 cut(s) 279, 319, 382, 819
BstMAI GTCTC 5 cut(s) 92, 113, 194, 564, 953
BstMBI GATC 4 cut(s) 276, 316, 379, 816
BstMWI GCNNNNNNNGC 5 cut(s) 11, 155, 344, 445, 755
BstNI CCWGG 1 cut(s) 804
BstNSI RCATGY 1 cut(s) 521
BstSCI CCNGG 1 cut(s) 802
BstSFI CTRYAG 1 cut(s) 598
BstV1I GCAGC 2 cut(s) 65, 198
BstV2I GAAGAC 1 cut(s) 966
BstX2I RGATCY 2 cut(s) 316, 816
BstXI CCANNNNNNTGG 1 cut(s) 839
BstYI RGATCY 2 cut(s) 316, 816
BtgZI GCGATG 1 cut(s) 734
BtrI CACGTC 1 cut(s) 574
BtsCI GGATG 1 cut(s) 36
BtsI GCAGTG 1 cut(s) 279
BtsIMutI CAGTG 1 cut(s) 279
BveI ACCTGC 2 cut(s) 380, 605
Cac8I GCNNGC 1 cut(s) 349
Cfr13I GGNCC 2 cut(s) 194, 555
CseI GACGC 1 cut(s) 347
Csp6I GTAC 1 cut(s) 472
CviAII CATG 3 cut(s) 82, 518, 937
CviQI GTAC 1 cut(s) 472
DdeI CTNAG 4 cut(s) 66, 117, 652, 955
DpnI GATC 4 cut(s) 278, 318, 381, 818
DpnII GATC 4 cut(s) 276, 316, 379, 816
Eam1104I CTCTTC 3 cut(s) 505, 637, 864
EarI CTCTTC 3 cut(s) 505, 637, 864
Eco31I GGTCTC 1 cut(s) 92
Eco32I GATATC 1 cut(s) 586
Eco47I GGWCC 2 cut(s) 194, 555
Eco57I CTGAAG 3 cut(s) 309, 461, 888
Eco88I CYCGRG 1 cut(s) 197
EcoRII CCWGG 1 cut(s) 802
EcoRV GATATC 1 cut(s) 586
Esp3I CGTCTC 1 cut(s) 564
FaeI CATG 3 cut(s) 85, 521, 940
FaiI YATR 9 cut(s) 83, 327, 506, 519, 562, 630, 793, 927, 938
FalI AAGNNNNNCTT 2 cut(s) 322, 354
FaqI GGGAC 2 cut(s) 84, 180
FatI CATG 3 cut(s) 81, 517, 936
Fnu4HI GCNGC 2 cut(s) 79, 212
FokI GGATG 1 cut(s) 43
Fsp4HI GCNGC 2 cut(s) 79, 212
FspBI CTAG 5 cut(s) 449, 638, 683, 755, 761
GluI GCNGC 2 cut(s) 79, 212
GsaI CCCAGC 1 cut(s) 162
HapII CCGG 1 cut(s) 902
HgaI GACGC 1 cut(s) 347
Hin1II CATG 3 cut(s) 85, 521, 940
HindIII AAGCTT 3 cut(s) 12, 349, 489
HinfI GANTC 6 cut(s) 43, 666, 679, 697, 953, 961
HpaII CCGG 1 cut(s) 902
HphI GGTGA 3 cut(s) 518, 764, 929
Hpy166II GTNNAC 4 cut(s) 526, 659, 772, 920
Hpy188I TCNGA 6 cut(s) 94, 111, 184, 289, 487, 958
Hpy188III TCNNGA 9 cut(s) 53, 173, 197, 320, 427, 567, 683, 866, 910
Hpy8I GTNNAC 4 cut(s) 526, 659, 772, 920
Hpy99I CGWCG 1 cut(s) 134
HpyAV CCTTC 1 cut(s) 452
HpyCH4III ACNGT 3 cut(s) 104, 194, 924
HpyCH4IV ACGT 1 cut(s) 573
HpyCH4V TGCA 6 cut(s) 81, 375, 544, 600, 741, 749
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 155, 344, 445, 755
HpyF3I CTNAG 4 cut(s) 66, 117, 652, 955
HpySE526I ACGT 1 cut(s) 573
Hsp92II CATG 3 cut(s) 85, 521, 940
Kzo9I GATC 4 cut(s) 276, 316, 379, 816
LguI GCTCTTC 1 cut(s) 505
LmnI GCTCC 2 cut(s) 112, 842
Lsp1109I GCAGC 2 cut(s) 65, 198
LweI GCATC 1 cut(s) 403
MaeI CTAG 5 cut(s) 449, 638, 683, 755, 761
MaeII ACGT 1 cut(s) 573
MaeIII GTNAC 4 cut(s) 143, 163, 367, 940
MalI GATC 4 cut(s) 278, 318, 381, 818
MboI GATC 4 cut(s) 276, 316, 379, 816
MboII GAAGA 9 cut(s) 302, 454, 467, 522, 590, 593, 654, 881, 966
MflI RGATCY 2 cut(s) 316, 816
MhlI GDGCHC 2 cut(s) 109, 517
MluCI AATT 5 cut(s) 257, 299, 399, 618, 798
MlyI GAGTC 3 cut(s) 52, 947, 955
MmeI TCCRAC 5 cut(s) 117, 134, 207, 617, 694
MnlI CCTC 7 cut(s) 49, 149, 190, 638, 645, 820, 836
MseI TTAA 1 cut(s) 353
MspA1I CMGCKG 1 cut(s) 539
MspI CCGG 1 cut(s) 902
MspR9I CCNGG 1 cut(s) 804
MvaI CCWGG 1 cut(s) 804
MwoI GCNNNNNNNGC 5 cut(s) 11, 155, 344, 445, 755
NdeII GATC 4 cut(s) 276, 316, 379, 816
NlaIII CATG 3 cut(s) 85, 521, 940
NlaIV GGNNCC 2 cut(s) 196, 808
NmuCI GTSAC 2 cut(s) 143, 163
NspI RCATGY 1 cut(s) 521
PciSI GCTCTTC 1 cut(s) 505
PcsI WCGNNNNNNNCGW 1 cut(s) 180
PfeI GAWTC 3 cut(s) 666, 679, 697
PflMI CCANNNNNTGG 1 cut(s) 721
PfoI TCCNGGA 1 cut(s) 802
PkrI GCNGC 2 cut(s) 80, 213
PleI GAGTC 3 cut(s) 51, 947, 955
PpsI GAGTC 3 cut(s) 51, 947, 955
Psp6I CCWGG 1 cut(s) 802
PspFI CCCAGC 1 cut(s) 158
PspGI CCWGG 1 cut(s) 802
PspN4I GGNNCC 2 cut(s) 196, 808
PspPI GGNCC 2 cut(s) 194, 555
PstI CTGCAG 1 cut(s) 602
PsuI RGATCY 2 cut(s) 316, 816
RsaI GTAC 1 cut(s) 473
RsaNI GTAC 1 cut(s) 472
SapI GCTCTTC 1 cut(s) 505
SaqAI TTAA 1 cut(s) 353
SatI GCNGC 2 cut(s) 79, 212
Sau3AI GATC 4 cut(s) 276, 316, 379, 816
Sau96I GGNCC 2 cut(s) 194, 555
SbfI CCTGCAGG 1 cut(s) 602
SchI GAGTC 3 cut(s) 52, 947, 955
ScrFI CCNGG 1 cut(s) 804
SdaI CCTGCAGG 1 cut(s) 602
SduI GDGCHC 2 cut(s) 109, 517
SfaNI GCATC 1 cut(s) 403
SfcI CTRYAG 1 cut(s) 598
SinI GGWCC 2 cut(s) 194, 555
SmlI CTYRAG 1 cut(s) 53
SmoI CTYRAG 1 cut(s) 53
Sse8387I CCTGCAGG 1 cut(s) 602
Sse9I AATT 5 cut(s) 257, 299, 399, 618, 798
SsiI CCGC 1 cut(s) 537
SspMI CTAG 5 cut(s) 449, 638, 683, 755, 761
StyD4I CCNGG 1 cut(s) 802
TaaI ACNGT 3 cut(s) 104, 194, 924
TaiI ACGT 1 cut(s) 576
TaqI TCGA 4 cut(s) 174, 397, 420, 566
TasI AATT 5 cut(s) 257, 299, 399, 618, 798
TatI WGTACW 1 cut(s) 471
TfiI GAWTC 3 cut(s) 666, 679, 697
Tru1I TTAA 1 cut(s) 353
Tru9I TTAA 1 cut(s) 353
TscAI CASTG 1 cut(s) 286
TseFI GTSAC 2 cut(s) 143, 163
TseI GCWGC 2 cut(s) 78, 211
Tsp45I GTSAC 2 cut(s) 143, 163
TspDTI ATGAA 1 cut(s) 47
TspGWI ACGGA 2 cut(s) 131, 841
TspRI CASTG 1 cut(s) 286
Van91I CCANNNNNTGG 1 cut(s) 721
VpaK11BI GGWCC 2 cut(s) 194, 555
XapI RAATTY 1 cut(s) 299
XbaI TCTAGA 1 cut(s) 682
XceI RCATGY 1 cut(s) 521
XcmI CCANNNNNNNNNTGG 1 cut(s) 975
XspI CTAG 5 cut(s) 449, 638, 683, 755, 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.