Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 824, 1799, 1961 |
| Acc36I | ACCTGC | 1 cut(s) | 1361 |
| AccB1I | GGYRCC | 1 cut(s) | 1916 |
| AccBSI | CCGCTC | 2 cut(s) | 666, 2150 |
| AccI | GTMKAC | 1 cut(s) | 2028 |
| AccII | CGCG | 1 cut(s) | 1601 |
| AciI | CCGC | 9 cut(s) | 55, 666, 789, 1527, 1599, 1601, 2124, 2150, 2254 |
| AclWI | GGATC | 8 cut(s) | 194, 555, 639, 1071, 1677, 1857, 1870, 1877 |
| AcoI | YGGCCR | 1 cut(s) | 1680 |
| AcsI | RAATTY | 4 cut(s) | 433, 998, 1132, 1900 |
| AcyI | GRCGYC | 1 cut(s) | 1043 |
| AfaI | GTAC | 5 cut(s) | 120, 370, 448, 1262, 1316 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 935, 1605, 1658, 1913, 2038 |
| AflIII | ACRYGT | 3 cut(s) | 1395, 1639, 1746 |
| AgeI | ACCGGT | 1 cut(s) | 1763 |
| AhlI | ACTAGT | 2 cut(s) | 872, 887 |
| AjiI | CACGTC | 2 cut(s) | 1236, 1642 |
| AjnI | CCWGG | 3 cut(s) | 442, 1779, 1885 |
| Alw26I | GTCTC | 6 cut(s) | 726, 1105, 1354, 1379, 1423, 1847 |
| AlwI | GGATC | 8 cut(s) | 194, 555, 639, 1071, 1677, 1857, 1870, 1877 |
| Ama87I | CYCGRG | 3 cut(s) | 616, 1806, 1857 |
| AoxI | GGCC | 8 cut(s) | 20, 715, 1253, 1573, 1649, 1660, 1680, 1925 |
| ApeKI | GCWGC | 7 cut(s) | 896, 1115, 1223, 1226, 2200, 2203, 2206 |
| ApoI | RAATTY | 4 cut(s) | 433, 998, 1132, 1900 |
| AsiGI | ACCGGT | 1 cut(s) | 1763 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1025, 1162 |
| AspS9I | GGNCC | 5 cut(s) | 917, 926, 1573, 1650, 2052 |
| AsuHPI | GGTGA | 3 cut(s) | 123, 293, 1709 |
| AsuII | TTCGAA | 3 cut(s) | 166, 1019, 1196 |
| AvaI | CYCGRG | 3 cut(s) | 616, 1806, 1857 |
| AvaII | GGWCC | 3 cut(s) | 917, 926, 2052 |
| BalI | TGGCCA | 1 cut(s) | 1682 |
| BamHI | GGATCC | 1 cut(s) | 1862 |
| BanI | GGYRCC | 1 cut(s) | 1916 |
| BanII | GRGCYC | 1 cut(s) | 2172 |
| BauI | CACGAG | 1 cut(s) | 361 |
| BbsI | GAAGAC | 1 cut(s) | 1230 |
| BbvI | GCAGC | 7 cut(s) | 883, 1102, 1210, 1213, 2212, 2215, 2218 |
| BceAI | ACGGC | 1 cut(s) | 42 |
| BciT130I | CCWGG | 3 cut(s) | 444, 1781, 1887 |
| BciVI | GTATCC | 1 cut(s) | 1734 |
| BclI | TGATCA | 2 cut(s) | 1108, 1705 |
| BcoDI | GTCTC | 6 cut(s) | 726, 1105, 1354, 1379, 1423, 1847 |
| BcuI | ACTAGT | 2 cut(s) | 872, 887 |
| BfaI | CTAG | 6 cut(s) | 24, 554, 774, 873, 888, 1773 |
| BfmI | CTRYAG | 2 cut(s) | 519, 1003 |
| BfuAI | ACCTGC | 1 cut(s) | 1361 |
| BfuI | GTATCC | 1 cut(s) | 1734 |
| BlpI | GCTNAGC | 1 cut(s) | 45 |
| Bme1390I | CCNGG | 3 cut(s) | 444, 1781, 1887 |
| Bme18I | GGWCC | 3 cut(s) | 917, 926, 2052 |
| BmeT110I | CYCGRG | 3 cut(s) | 616, 1806, 1857 |
| BmgBI | CACGTC | 2 cut(s) | 1236, 1642 |
| BmgT120I | GGNCC | 5 cut(s) | 917, 926, 1573, 1650, 2052 |
| BmiI | GGNNCC | 6 cut(s) | 918, 1447, 1652, 1864, 1918, 1996 |
| BmrFI | CCNGG | 3 cut(s) | 444, 1781, 1887 |
| BmsI | GCATC | 5 cut(s) | 269, 1181, 1603, 1960, 1996 |
| BoxI | GACNNNNGTC | 2 cut(s) | 288, 2034 |
| BpiI | GAAGAC | 1 cut(s) | 1230 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1481, 1513, 1683, 1715 |
| BpmI | CTGGAG | 2 cut(s) | 682, 1666 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2171, 2249 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 45 |
| Bpu14I | TTCGAA | 3 cut(s) | 166, 1019, 1196 |
| BpuEI | CTTGAG | 7 cut(s) | 255, 558, 1405, 1448, 1871, 2020, 2150 |
| BsaHI | GRCGYC | 1 cut(s) | 1043 |
| BsaI | GGTCTC | 2 cut(s) | 1379, 1423 |
| BsaJI | CCNNGG | 6 cut(s) | 454, 1551, 1576, 1599, 1866, 1886 |
| BsaWI | WCCGGW | 3 cut(s) | 530, 1666, 1763 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 935, 1605, 1658, 1913, 2038 |
| Bse118I | RCCGGY | 3 cut(s) | 976, 1616, 1763 |
| Bse1I | ACTGG | 7 cut(s) | 665, 940, 1071, 1447, 1515, 1528, 1796 |
| BseBI | CCWGG | 3 cut(s) | 444, 1781, 1887 |
| BseDI | CCNNGG | 6 cut(s) | 454, 1551, 1576, 1599, 1866, 1886 |
| BseGI | GGATG | 4 cut(s) | 419, 633, 1175, 1683 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 935, 1605, 1658, 1913, 2038 |
| BseMII | CTCAG | 6 cut(s) | 59, 308, 1038, 1233, 1390, 2185 |
| BseNI | ACTGG | 7 cut(s) | 665, 940, 1071, 1447, 1515, 1528, 1796 |
| BseRI | GAGGAG | 1 cut(s) | 1313 |
| BseXI | GCAGC | 7 cut(s) | 883, 1102, 1210, 1213, 2212, 2215, 2218 |
| BseYI | CCCAGC | 1 cut(s) | 1604 |
| Bsh1236I | CGCG | 1 cut(s) | 1601 |
| BshFI | GGCC | 8 cut(s) | 22, 717, 1255, 1575, 1651, 1662, 1682, 1927 |
| BshNI | GGYRCC | 1 cut(s) | 1916 |
| BshTI | ACCGGT | 1 cut(s) | 1763 |
| BsiHKCI | CYCGRG | 3 cut(s) | 616, 1806, 1857 |
| BsiSI | CCGG | 6 cut(s) | 531, 977, 1256, 1617, 1667, 1764 |
| BslFI | GGGAC | 2 cut(s) | 883, 2154 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 935, 1605, 1658, 1913, 2038 |
| BsmAI | GTCTC | 6 cut(s) | 726, 1105, 1354, 1379, 1423, 1847 |
| BsmFI | GGGAC | 2 cut(s) | 883, 2154 |
| BsmI | GAATGC | 1 cut(s) | 1025 |
| BsnI | GGCC | 8 cut(s) | 22, 717, 1255, 1575, 1651, 1662, 1682, 1927 |
| Bso31I | GGTCTC | 2 cut(s) | 1379, 1423 |
| BsoBI | CYCGRG | 3 cut(s) | 616, 1806, 1857 |
| Bsp119I | TTCGAA | 3 cut(s) | 166, 1019, 1196 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2172 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 45 |
| Bsp19I | CCATGG | 3 cut(s) | 454, 1551, 1866 |
| BspACI | CCGC | 9 cut(s) | 55, 666, 789, 1527, 1599, 1601, 2124, 2150, 2254 |
| BspANI | GGCC | 8 cut(s) | 22, 717, 1255, 1575, 1651, 1662, 1682, 1927 |
| BspCNI | CTCAG | 6 cut(s) | 58, 307, 1039, 1234, 1389, 2184 |
| BspFNI | CGCG | 1 cut(s) | 1601 |
| BspHI | TCATGA | 1 cut(s) | 2278 |
| BspLI | GGNNCC | 6 cut(s) | 918, 1447, 1652, 1864, 1918, 1996 |
| BspMI | ACCTGC | 1 cut(s) | 1361 |
| BspPI | GGATC | 8 cut(s) | 194, 555, 639, 1071, 1677, 1857, 1870, 1877 |
| BspT104I | TTCGAA | 3 cut(s) | 166, 1019, 1196 |
| BspT107I | GGYRCC | 1 cut(s) | 1916 |
| BspTNI | GGTCTC | 2 cut(s) | 1379, 1423 |
| BsrBI | CCGCTC | 2 cut(s) | 666, 2150 |
| BsrFI | RCCGGY | 3 cut(s) | 976, 1616, 1763 |
| BsrI | ACTGG | 7 cut(s) | 665, 940, 1071, 1447, 1515, 1528, 1796 |
| BssAI | RCCGGY | 3 cut(s) | 976, 1616, 1763 |
| BssECI | CCNNGG | 6 cut(s) | 454, 1551, 1576, 1599, 1866, 1886 |
| BssNI | GRCGYC | 1 cut(s) | 1043 |
| BssSI | CACGAG | 1 cut(s) | 361 |
| BssT1I | CCWWGG | 3 cut(s) | 454, 1551, 1866 |
| Bst2BI | CACGAG | 1 cut(s) | 361 |
| Bst2UI | CCWGG | 3 cut(s) | 444, 1781, 1887 |
| Bst4CI | ACNGT | 3 cut(s) | 1099, 1193, 1417 |
| Bst6I | CTCTTC | 3 cut(s) | 215, 950, 1357 |
| BstACI | GRCGYC | 1 cut(s) | 1043 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 251 |
| BstBI | TTCGAA | 3 cut(s) | 166, 1019, 1196 |
| BstDEI | CTNAG | 9 cut(s) | 45, 294, 337, 1047, 1242, 1376, 1688, 2171, 2249 |
| BstDSI | CCRYGG | 4 cut(s) | 454, 1551, 1599, 1866 |
| BstEII | GGTNACC | 1 cut(s) | 349 |
| BstF5I | GGATG | 4 cut(s) | 419, 633, 1175, 1683 |
| BstFNI | CGCG | 1 cut(s) | 1601 |
| BstMAI | GTCTC | 6 cut(s) | 726, 1105, 1354, 1379, 1423, 1847 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 251, 266, 550, 2206, 2254 |
| BstNI | CCWGG | 3 cut(s) | 444, 1781, 1887 |
| BstNSI | RCATGY | 5 cut(s) | 1294, 1399, 1750, 1849, 1951 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 288, 2034 |
| BstPI | GGTNACC | 1 cut(s) | 349 |
| BstSCI | CCNGG | 3 cut(s) | 442, 1779, 1885 |
| BstSFI | CTRYAG | 2 cut(s) | 519, 1003 |
| BstUI | CGCG | 1 cut(s) | 1601 |
| BstV1I | GCAGC | 7 cut(s) | 883, 1102, 1210, 1213, 2212, 2215, 2218 |
| BstV2I | GAAGAC | 1 cut(s) | 1230 |
| BstX2I | RGATCY | 2 cut(s) | 1862, 1882 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 601, 1886 |
| BstYI | RGATCY | 2 cut(s) | 1862, 1882 |
| BsuI | GTATCC | 1 cut(s) | 1734 |
| BsuRI | GGCC | 8 cut(s) | 22, 717, 1255, 1575, 1651, 1662, 1682, 1927 |
| BtgI | CCRYGG | 4 cut(s) | 454, 1551, 1599, 1866 |
| BtrI | CACGTC | 2 cut(s) | 1236, 1642 |
| BtsCI | GGATG | 4 cut(s) | 419, 633, 1175, 1683 |
| BtsI | GCAGTG | 1 cut(s) | 1216 |
| BtsIMutI | CAGTG | 4 cut(s) | 933, 1078, 1216, 1683 |
| BveI | ACCTGC | 1 cut(s) | 1361 |
| CciI | TCATGA | 1 cut(s) | 2278 |
| Cfr10I | RCCGGY | 3 cut(s) | 976, 1616, 1763 |
| Cfr13I | GGNCC | 5 cut(s) | 917, 926, 1573, 1650, 2052 |
| Cfr42I | CCGCGG | 1 cut(s) | 1602 |
| CseI | GACGC | 1 cut(s) | 1032 |
| CsiI | ACCWGGT | 1 cut(s) | 1779 |
| Csp6I | GTAC | 5 cut(s) | 119, 369, 447, 1261, 1315 |
| CspAI | ACCGGT | 1 cut(s) | 1763 |
| CviQI | GTAC | 5 cut(s) | 119, 369, 447, 1261, 1315 |
| DdeI | CTNAG | 9 cut(s) | 45, 294, 337, 1047, 1242, 1376, 1688, 2171, 2249 |
| DraI | TTTAAA | 1 cut(s) | 438 |
| EaeI | YGGCCR | 1 cut(s) | 1680 |
| Eam1104I | CTCTTC | 3 cut(s) | 215, 950, 1357 |
| EarI | CTCTTC | 3 cut(s) | 215, 950, 1357 |
| Eco130I | CCWWGG | 3 cut(s) | 454, 1551, 1866 |
| Eco147I | AGGCCT | 3 cut(s) | 22, 717, 1662 |
| Eco24I | GRGCYC | 1 cut(s) | 2172 |
| Eco31I | GGTCTC | 2 cut(s) | 1379, 1423 |
| Eco32I | GATATC | 1 cut(s) | 1056 |
| Eco47I | GGWCC | 3 cut(s) | 917, 926, 2052 |
| Eco88I | CYCGRG | 3 cut(s) | 616, 1806, 1857 |
| Eco91I | GGTNACC | 1 cut(s) | 349 |
| EcoO109I | RGGNCCY | 2 cut(s) | 917, 1650 |
| EcoO65I | GGTNACC | 1 cut(s) | 349 |
| EcoRI | GAATTC | 1 cut(s) | 998 |
| EcoRII | CCWGG | 3 cut(s) | 442, 1779, 1885 |
| EcoRV | GATATC | 1 cut(s) | 1056 |
| EcoT14I | CCWWGG | 3 cut(s) | 454, 1551, 1866 |
| EcoT22I | ATGCAT | 2 cut(s) | 256, 1953 |
| EcoT38I | GRGCYC | 1 cut(s) | 2172 |
| ErhI | CCWWGG | 3 cut(s) | 454, 1551, 1866 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1222, 1254, 1465, 1497 |
| FaqI | GGGAC | 2 cut(s) | 883, 2154 |
| FauI | CCCGC | 2 cut(s) | 659, 2117 |
| FauNDI | CATATG | 1 cut(s) | 387 |
| FbaI | TGATCA | 2 cut(s) | 1108, 1705 |
| FblI | GTMKAC | 1 cut(s) | 2028 |
| FokI | GGATG | 4 cut(s) | 406, 640, 1162, 1670 |
| FriOI | GRGCYC | 1 cut(s) | 2172 |
| FspBI | CTAG | 6 cut(s) | 24, 554, 774, 873, 888, 1773 |
| GsaI | CCCAGC | 1 cut(s) | 1608 |
| GsuI | CTGGAG | 2 cut(s) | 682, 1666 |
| HaeIII | GGCC | 8 cut(s) | 22, 717, 1255, 1575, 1651, 1662, 1682, 1927 |
| HapII | CCGG | 6 cut(s) | 531, 977, 1256, 1617, 1667, 1764 |
| HgaI | GACGC | 1 cut(s) | 1032 |
| Hin1I | GRCGYC | 1 cut(s) | 1043 |
| HindIII | AAGCTT | 3 cut(s) | 334, 1479, 1872 |
| HpaII | CCGG | 6 cut(s) | 531, 977, 1256, 1617, 1667, 1764 |
| HphI | GGTGA | 3 cut(s) | 123, 293, 1709 |
| Hpy166II | GTNNAC | 1 cut(s) | 2029 |
| Hpy188I | TCNGA | 6 cut(s) | 176, 204, 297, 1048, 1243, 1627 |
| Hpy8I | GTNNAC | 1 cut(s) | 2029 |
| HpyAV | CCTTC | 4 cut(s) | 759, 1015, 1267, 1907 |
| HpyCH4III | ACNGT | 3 cut(s) | 1099, 1193, 1417 |
| HpyCH4IV | ACGT | 4 cut(s) | 1034, 1235, 1641, 2190 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 251, 266, 550, 2206, 2254 |
| HpyF3I | CTNAG | 9 cut(s) | 45, 294, 337, 1047, 1242, 1376, 1688, 2171, 2249 |
| HpySE526I | ACGT | 4 cut(s) | 1034, 1235, 1641, 2190 |
| Hsp92I | GRCGYC | 1 cut(s) | 1043 |
| KroI | GCCGGC | 1 cut(s) | 1616 |
| KroNI | GCCGGC | 1 cut(s) | 1618 |
| Ksp22I | TGATCA | 2 cut(s) | 1108, 1705 |
| KspI | CCGCGG | 1 cut(s) | 1602 |
| LmnI | GCTCC | 4 cut(s) | 663, 1220, 1287, 2147 |
| Lsp1109I | GCAGC | 7 cut(s) | 883, 1102, 1210, 1213, 2212, 2215, 2218 |
| LweI | GCATC | 5 cut(s) | 269, 1181, 1603, 1960, 1996 |
| MabI | ACCWGGT | 1 cut(s) | 1779 |
| MaeI | CTAG | 6 cut(s) | 24, 554, 774, 873, 888, 1773 |
| MaeII | ACGT | 4 cut(s) | 1034, 1235, 1641, 2190 |
| MaeIII | GTNAC | 6 cut(s) | 281, 349, 407, 514, 791, 2267 |
| MbiI | CCGCTC | 2 cut(s) | 666, 2150 |
| MfeI | CAATTG | 3 cut(s) | 639, 758, 1973 |
| MflI | RGATCY | 2 cut(s) | 1862, 1882 |
| MhlI | GDGCHC | 1 cut(s) | 2172 |
| MlsI | TGGCCA | 1 cut(s) | 1682 |
| MluNI | TGGCCA | 1 cut(s) | 1682 |
| MlyI | GAGTC | 6 cut(s) | 298, 565, 1253, 1370, 1381, 1849 |
| MmeI | TCCRAC | 5 cut(s) | 227, 972, 1751, 1931, 2218 |
| Mox20I | TGGCCA | 1 cut(s) | 1682 |
| Mph1103I | ATGCAT | 2 cut(s) | 256, 1953 |
| MroNI | GCCGGC | 1 cut(s) | 1616 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1025, 1162 |
| MscI | TGGCCA | 1 cut(s) | 1682 |
| MseI | TTAA | 2 cut(s) | 437, 2293 |
| Msp20I | TGGCCA | 1 cut(s) | 1682 |
| MspA1I | CMGCKG | 2 cut(s) | 988, 1601 |
| MspI | CCGG | 6 cut(s) | 531, 977, 1256, 1617, 1667, 1764 |
| MspR9I | CCNGG | 3 cut(s) | 444, 1781, 1887 |
| MunI | CAATTG | 3 cut(s) | 639, 758, 1973 |
| Mva1269I | GAATGC | 1 cut(s) | 1025 |
| MvaI | CCWGG | 3 cut(s) | 444, 1781, 1887 |
| MvnI | CGCG | 1 cut(s) | 1601 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 251, 266, 550, 2206, 2254 |
| NaeI | GCCGGC | 1 cut(s) | 1618 |
| NcoI | CCATGG | 3 cut(s) | 454, 1551, 1866 |
| NdeI | CATATG | 1 cut(s) | 387 |
| NgoMIV | GCCGGC | 1 cut(s) | 1616 |
| NlaIV | GGNNCC | 6 cut(s) | 918, 1447, 1652, 1864, 1918, 1996 |
| NmeAIII | GCCGAG | 1 cut(s) | 1557 |
| NmuCI | GTSAC | 3 cut(s) | 281, 514, 2267 |
| NsiI | ATGCAT | 2 cut(s) | 256, 1953 |
| NspI | RCATGY | 5 cut(s) | 1294, 1399, 1750, 1849, 1951 |
| NspV | TTCGAA | 3 cut(s) | 166, 1019, 1196 |
| PaeI | GCATGC | 1 cut(s) | 1951 |
| PaeR7I | CTCGAG | 2 cut(s) | 616, 1857 |
| PagI | TCATGA | 1 cut(s) | 2278 |
| PceI | AGGCCT | 3 cut(s) | 22, 717, 1662 |
| PciI | ACATGT | 2 cut(s) | 1395, 1746 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1040 |
| PctI | GAATGC | 1 cut(s) | 1025 |
| PdiI | GCCGGC | 1 cut(s) | 1618 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1025, 1162 |
| PfeI | GAWTC | 4 cut(s) | 29, 606, 1979, 2275 |
| PinAI | ACCGGT | 1 cut(s) | 1763 |
| PleI | GAGTC | 6 cut(s) | 297, 565, 1252, 1369, 1381, 1849 |
| PpsI | GAGTC | 6 cut(s) | 297, 565, 1252, 1369, 1381, 1849 |
| PpuMI | RGGWCCY | 1 cut(s) | 917 |
| PscI | ACATGT | 2 cut(s) | 1395, 1746 |
| PshAI | GACNNNNGTC | 2 cut(s) | 288, 2034 |
| PsiI | TTATAA | 3 cut(s) | 824, 1799, 1961 |
| Psp5II | RGGWCCY | 1 cut(s) | 917 |
| Psp6I | CCWGG | 3 cut(s) | 442, 1779, 1885 |
| PspEI | GGTNACC | 1 cut(s) | 349 |
| PspFI | CCCAGC | 1 cut(s) | 1604 |
| PspGI | CCWGG | 3 cut(s) | 442, 1779, 1885 |
| PspN4I | GGNNCC | 6 cut(s) | 918, 1447, 1652, 1864, 1918, 1996 |
| PspPI | GGNCC | 5 cut(s) | 917, 926, 1573, 1650, 2052 |
| PspPPI | RGGWCCY | 1 cut(s) | 917 |
| PspXI | VCTCGAGB | 2 cut(s) | 616, 1857 |
| PsuI | RGATCY | 2 cut(s) | 1862, 1882 |
| PvuII | CAGCTG | 1 cut(s) | 988 |
| RsaI | GTAC | 5 cut(s) | 120, 370, 448, 1262, 1316 |
| RsaNI | GTAC | 5 cut(s) | 119, 369, 447, 1261, 1315 |
| SacII | CCGCGG | 1 cut(s) | 1602 |
| SaqAI | TTAA | 2 cut(s) | 437, 2293 |
| Sau96I | GGNCC | 5 cut(s) | 917, 926, 1573, 1650, 2052 |
| SchI | GAGTC | 6 cut(s) | 298, 565, 1253, 1370, 1381, 1849 |
| ScrFI | CCNGG | 3 cut(s) | 444, 1781, 1887 |
| SduI | GDGCHC | 1 cut(s) | 2172 |
| SexAI | ACCWGGT | 1 cut(s) | 1779 |
| SfaNI | GCATC | 5 cut(s) | 269, 1181, 1603, 1960, 1996 |
| SfcI | CTRYAG | 2 cut(s) | 519, 1003 |
| Sfr274I | CTCGAG | 2 cut(s) | 616, 1857 |
| Sfr303I | CCGCGG | 1 cut(s) | 1602 |
| SfuI | TTCGAA | 3 cut(s) | 166, 1019, 1196 |
| SgrBI | CCGCGG | 1 cut(s) | 1602 |
| SinI | GGWCC | 3 cut(s) | 917, 926, 2052 |
| SlaI | CTCGAG | 2 cut(s) | 616, 1857 |
| SmlI | CTYRAG | 9 cut(s) | 270, 573, 616, 1420, 1463, 1850, 1857, 1999, 2129 |
| SmoI | CTYRAG | 9 cut(s) | 270, 573, 616, 1420, 1463, 1850, 1857, 1999, 2129 |
| SpeI | ACTAGT | 2 cut(s) | 872, 887 |
| SphI | GCATGC | 1 cut(s) | 1951 |
| SseBI | AGGCCT | 3 cut(s) | 22, 717, 1662 |
| SsiI | CCGC | 9 cut(s) | 55, 666, 789, 1527, 1599, 1601, 2124, 2150, 2254 |
| SspMI | CTAG | 6 cut(s) | 24, 554, 774, 873, 888, 1773 |
| StuI | AGGCCT | 3 cut(s) | 22, 717, 1662 |
| StyD4I | CCNGG | 3 cut(s) | 442, 1779, 1885 |
| StyI | CCWWGG | 3 cut(s) | 454, 1551, 1866 |
| TaaI | ACNGT | 3 cut(s) | 1099, 1193, 1417 |
| TaiI | ACGT | 4 cut(s) | 1037, 1238, 1644, 2193 |
| TatI | WGTACW | 1 cut(s) | 1314 |
| TauI | GCSGC | 4 cut(s) | 57, 1601, 1604, 2257 |
| TfiI | GAWTC | 4 cut(s) | 29, 606, 1979, 2275 |
| Tru1I | TTAA | 2 cut(s) | 437, 2293 |
| Tru9I | TTAA | 2 cut(s) | 437, 2293 |
| TscAI | CASTG | 4 cut(s) | 940, 1078, 1216, 1683 |
| TseFI | GTSAC | 3 cut(s) | 281, 514, 2267 |
| TseI | GCWGC | 7 cut(s) | 896, 1115, 1223, 1226, 2200, 2203, 2206 |
| Tsp45I | GTSAC | 3 cut(s) | 281, 514, 2267 |
| TspDTI | ATGAA | 5 cut(s) | 555, 824, 1215, 2216, 2267 |
| TspGWI | ACGGA | 2 cut(s) | 1126, 1745 |
| TspRI | CASTG | 4 cut(s) | 940, 1078, 1216, 1683 |
| VpaK11BI | GGWCC | 3 cut(s) | 917, 926, 2052 |
| XapI | RAATTY | 4 cut(s) | 433, 998, 1132, 1900 |
| XbaI | TCTAGA | 1 cut(s) | 1772 |
| XceI | RCATGY | 5 cut(s) | 1294, 1399, 1750, 1849, 1951 |
| XhoI | CTCGAG | 2 cut(s) | 616, 1857 |
| XmiI | GTMKAC | 1 cut(s) | 2028 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1025, 1162 |
| XspI | CTAG | 6 cut(s) | 24, 554, 774, 873, 888, 1773 |
| Zsp2I | ATGCAT | 2 cut(s) | 256, 1953 |