Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 184 |
| AcsI | RAATTY | 1 cut(s) | 348 |
| AgsI | TTSAA | 5 cut(s) | 53, 86, 98, 110, 353 |
| AhlI | ACTAGT | 1 cut(s) | 289 |
| AjnI | CCWGG | 2 cut(s) | 63, 267 |
| ApoI | RAATTY | 1 cut(s) | 348 |
| AseI | ATTAAT | 1 cut(s) | 324 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 291 |
| AspLEI | GCGC | 1 cut(s) | 279 |
| AspS9I | GGNCC | 1 cut(s) | 61 |
| AvaII | GGWCC | 1 cut(s) | 61 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 33, 66 |
| BccI | CCATC | 1 cut(s) | 52 |
| BciT130I | CCWGG | 2 cut(s) | 65, 269 |
| BciVI | GTATCC | 1 cut(s) | 34 |
| BcuI | ACTAGT | 1 cut(s) | 289 |
| BfaI | CTAG | 1 cut(s) | 290 |
| BfuI | GTATCC | 1 cut(s) | 34 |
| Bme1390I | CCNGG | 2 cut(s) | 65, 269 |
| Bme18I | GGWCC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 1 cut(s) | 61 |
| BmrFI | CCNGG | 2 cut(s) | 65, 269 |
| BmsI | GCATC | 1 cut(s) | 27 |
| BsaAI | YACGTR | 1 cut(s) | 134 |
| BseBI | CCWGG | 2 cut(s) | 65, 269 |
| BseGI | GGATG | 1 cut(s) | 63 |
| BseRI | GAGGAG | 1 cut(s) | 182 |
| Bsp143I | GATC | 1 cut(s) | 198 |
| BspACI | CCGC | 1 cut(s) | 184 |
| BssMI | GATC | 1 cut(s) | 198 |
| Bst2UI | CCWGG | 2 cut(s) | 65, 269 |
| Bst4CI | ACNGT | 2 cut(s) | 29, 154 |
| BstBAI | YACGTR | 1 cut(s) | 134 |
| BstC8I | GCNNGC | 1 cut(s) | 16 |
| BstF5I | GGATG | 1 cut(s) | 63 |
| BstHHI | GCGC | 1 cut(s) | 279 |
| BstKTI | GATC | 1 cut(s) | 201 |
| BstMBI | GATC | 1 cut(s) | 198 |
| BstNI | CCWGG | 2 cut(s) | 65, 269 |
| BstSCI | CCNGG | 2 cut(s) | 63, 267 |
| BsuI | GTATCC | 1 cut(s) | 34 |
| BtsCI | GGATG | 1 cut(s) | 63 |
| Cac8I | GCNNGC | 1 cut(s) | 16 |
| CfoI | GCGC | 1 cut(s) | 279 |
| Cfr13I | GGNCC | 1 cut(s) | 61 |
| CviAII | CATG | 1 cut(s) | 205 |
| CviJI | RGCY | 4 cut(s) | 71, 121, 236, 254 |
| CviKI_1 | RGCY | 4 cut(s) | 71, 121, 236, 254 |
| DpnI | GATC | 1 cut(s) | 200 |
| DpnII | GATC | 1 cut(s) | 198 |
| Eco47I | GGWCC | 1 cut(s) | 61 |
| EcoRI | GAATTC | 1 cut(s) | 348 |
| EcoRII | CCWGG | 2 cut(s) | 63, 267 |
| FaeI | CATG | 1 cut(s) | 208 |
| FaiI | YATR | 5 cut(s) | 137, 148, 206, 284, 361 |
| FatI | CATG | 1 cut(s) | 204 |
| FokI | GGATG | 1 cut(s) | 70 |
| FspBI | CTAG | 1 cut(s) | 290 |
| GlaI | GCGC | 1 cut(s) | 278 |
| HhaI | GCGC | 1 cut(s) | 279 |
| Hin1II | CATG | 1 cut(s) | 208 |
| Hin6I | GCGC | 1 cut(s) | 277 |
| HinP1I | GCGC | 1 cut(s) | 277 |
| HinfI | GANTC | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 1 cut(s) | 219 |
| Hpy188III | TCNNGA | 1 cut(s) | 353 |
| HpyAV | CCTTC | 1 cut(s) | 47 |
| HpyCH4III | ACNGT | 2 cut(s) | 29, 154 |
| HpyCH4IV | ACGT | 1 cut(s) | 133 |
| HpyCH4V | TGCA | 3 cut(s) | 36, 231, 336 |
| HpySE526I | ACGT | 1 cut(s) | 133 |
| Hsp92II | CATG | 1 cut(s) | 208 |
| HspAI | GCGC | 1 cut(s) | 277 |
| Kzo9I | GATC | 1 cut(s) | 198 |
| LpnPI | CCDG | 4 cut(s) | 50, 77, 254, 281 |
| LweI | GCATC | 1 cut(s) | 27 |
| MaeI | CTAG | 1 cut(s) | 290 |
| MaeII | ACGT | 1 cut(s) | 133 |
| MaeIII | GTNAC | 1 cut(s) | 154 |
| MalI | GATC | 1 cut(s) | 200 |
| MboI | GATC | 1 cut(s) | 198 |
| MboII | GAAGA | 2 cut(s) | 17, 20 |
| MluCI | AATT | 3 cut(s) | 105, 226, 348 |
| MnlI | CCTC | 1 cut(s) | 160 |
| MroXI | GAANNNNTTC | 1 cut(s) | 291 |
| MseI | TTAA | 1 cut(s) | 324 |
| MspR9I | CCNGG | 2 cut(s) | 65, 269 |
| MvaI | CCWGG | 2 cut(s) | 65, 269 |
| NdeII | GATC | 1 cut(s) | 198 |
| NlaIII | CATG | 1 cut(s) | 208 |
| PdmI | GAANNNNTTC | 1 cut(s) | 291 |
| PfeI | GAWTC | 1 cut(s) | 94 |
| PfoI | TCCNGGA | 2 cut(s) | 63, 267 |
| Ppu21I | YACGTR | 1 cut(s) | 134 |
| PshBI | ATTAAT | 1 cut(s) | 324 |
| Psp6I | CCWGG | 2 cut(s) | 63, 267 |
| PspGI | CCWGG | 2 cut(s) | 63, 267 |
| PspPI | GGNCC | 1 cut(s) | 61 |
| SaqAI | TTAA | 1 cut(s) | 324 |
| Sau3AI | GATC | 1 cut(s) | 198 |
| Sau96I | GGNCC | 1 cut(s) | 61 |
| ScrFI | CCNGG | 2 cut(s) | 65, 269 |
| SetI | ASST | 3 cut(s) | 115, 136, 194 |
| SfaNI | GCATC | 1 cut(s) | 27 |
| SinI | GGWCC | 1 cut(s) | 61 |
| SpeI | ACTAGT | 1 cut(s) | 289 |
| Sse9I | AATT | 3 cut(s) | 105, 226, 348 |
| SsiI | CCGC | 1 cut(s) | 184 |
| SspMI | CTAG | 1 cut(s) | 290 |
| StyD4I | CCNGG | 2 cut(s) | 63, 267 |
| TaaI | ACNGT | 2 cut(s) | 29, 154 |
| TaiI | ACGT | 1 cut(s) | 136 |
| TasI | AATT | 3 cut(s) | 105, 226, 348 |
| TfiI | GAWTC | 1 cut(s) | 94 |
| Tru1I | TTAA | 1 cut(s) | 324 |
| Tru9I | TTAA | 1 cut(s) | 324 |
| VpaK11BI | GGWCC | 1 cut(s) | 61 |
| VspI | ATTAAT | 1 cut(s) | 324 |
| XapI | RAATTY | 1 cut(s) | 348 |
| XmnI | GAANNNNTTC | 1 cut(s) | 291 |
| XspI | CTAG | 1 cut(s) | 290 |