Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1125, 1230 |
| Acc36I | ACCTGC | 1 cut(s) | 518 |
| AccI | GTMKAC | 1 cut(s) | 256 |
| AciI | CCGC | 4 cut(s) | 36, 218, 644, 1432 |
| AclWI | GGATC | 1 cut(s) | 1682 |
| AcoI | YGGCCR | 1 cut(s) | 1204 |
| AcsI | RAATTY | 1 cut(s) | 1492 |
| AcuI | CTGAAG | 1 cut(s) | 373 |
| AfaI | GTAC | 1 cut(s) | 1540 |
| AjnI | CCWGG | 1 cut(s) | 136 |
| AluBI | AGCT | 5 cut(s) | 393, 605, 1102, 1364, 1487 |
| AluI | AGCT | 5 cut(s) | 393, 605, 1102, 1364, 1487 |
| Alw26I | GTCTC | 3 cut(s) | 118, 866, 1574 |
| AlwI | GGATC | 1 cut(s) | 1682 |
| AoxI | GGCC | 4 cut(s) | 1065, 1204, 1246, 1471 |
| ApeKI | GCWGC | 5 cut(s) | 17, 39, 497, 520, 602 |
| ApoI | RAATTY | 1 cut(s) | 1492 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 238, 270 |
| AseI | ATTAAT | 1 cut(s) | 357 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 201, 719, 1602 |
| AsuHPI | GGTGA | 2 cut(s) | 502, 796 |
| AsuII | TTCGAA | 2 cut(s) | 7, 1222 |
| AxyI | CCTNAGG | 1 cut(s) | 492 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 684, 717 |
| BalI | TGGCCA | 1 cut(s) | 1206 |
| BanII | GRGCYC | 1 cut(s) | 998 |
| BbsI | GAAGAC | 2 cut(s) | 419, 1384 |
| BbvI | GCAGC | 5 cut(s) | 4, 51, 484, 507, 614 |
| BccI | CCATC | 7 cut(s) | 141, 619, 677, 838, 923, 1133, 1238 |
| BceAI | ACGGC | 1 cut(s) | 481 |
| BciT130I | CCWGG | 1 cut(s) | 138 |
| BciVI | GTATCC | 3 cut(s) | 685, 1031, 1672 |
| BcoDI | GTCTC | 3 cut(s) | 118, 866, 1574 |
| BfaI | CTAG | 1 cut(s) | 1280 |
| BfmI | CTRYAG | 4 cut(s) | 282, 521, 1593, 1632 |
| BfuAI | ACCTGC | 1 cut(s) | 518 |
| BfuI | GTATCC | 3 cut(s) | 685, 1031, 1672 |
| BglII | AGATCT | 1 cut(s) | 796 |
| BisI | GCNGC | 6 cut(s) | 18, 37, 40, 498, 521, 603 |
| BlsI | GCNGC | 6 cut(s) | 19, 38, 41, 499, 522, 604 |
| Bme1390I | CCNGG | 1 cut(s) | 138 |
| BmiI | GGNNCC | 1 cut(s) | 997 |
| BmrFI | CCNGG | 1 cut(s) | 138 |
| BmsI | GCATC | 7 cut(s) | 166, 629, 697, 1159, 1423, 1627, 1649 |
| BpiI | GAAGAC | 2 cut(s) | 419, 1384 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 164, 196 |
| Bpu14I | TTCGAA | 2 cut(s) | 7, 1222 |
| Bsa29I | ATCGAT | 1 cut(s) | 1059 |
| BsaJI | CCNNGG | 2 cut(s) | 999, 1558 |
| Bse21I | CCTNAGG | 1 cut(s) | 492 |
| Bse3DI | GCAATG | 2 cut(s) | 31, 717 |
| BseBI | CCWGG | 1 cut(s) | 138 |
| BseCI | ATCGAT | 1 cut(s) | 1059 |
| BseDI | CCNNGG | 2 cut(s) | 999, 1558 |
| BseGI | GGATG | 5 cut(s) | 133, 181, 644, 849, 934 |
| BseMI | GCAATG | 2 cut(s) | 31, 717 |
| BseMII | CTCAG | 2 cut(s) | 483, 738 |
| BseRI | GAGGAG | 2 cut(s) | 791, 960 |
| BseXI | GCAGC | 5 cut(s) | 4, 51, 484, 507, 614 |
| BseYI | CCCAGC | 1 cut(s) | 1364 |
| BsgI | GTGCAG | 1 cut(s) | 483 |
| BshFI | GGCC | 4 cut(s) | 1067, 1206, 1248, 1473 |
| BshVI | ATCGAT | 1 cut(s) | 1059 |
| BslFI | GGGAC | 1 cut(s) | 218 |
| BsmAI | GTCTC | 3 cut(s) | 118, 866, 1574 |
| BsmBI | CGTCTC | 1 cut(s) | 866 |
| BsmFI | GGGAC | 1 cut(s) | 218 |
| BsnI | GGCC | 4 cut(s) | 1067, 1206, 1248, 1473 |
| Bsp119I | TTCGAA | 2 cut(s) | 7, 1222 |
| Bsp1286I | GDGCHC | 1 cut(s) | 998 |
| Bsp143I | GATC | 5 cut(s) | 585, 796, 976, 1056, 1687 |
| Bsp19I | CCATGG | 1 cut(s) | 999 |
| BspACI | CCGC | 4 cut(s) | 36, 218, 644, 1432 |
| BspANI | GGCC | 4 cut(s) | 1067, 1206, 1248, 1473 |
| BspCNI | CTCAG | 2 cut(s) | 484, 737 |
| BspDI | ATCGAT | 1 cut(s) | 1059 |
| BspLI | GGNNCC | 1 cut(s) | 997 |
| BspMAI | CTGCAG | 3 cut(s) | 286, 525, 1636 |
| BspMI | ACCTGC | 1 cut(s) | 518 |
| BspPI | GGATC | 1 cut(s) | 1682 |
| BspT104I | TTCGAA | 2 cut(s) | 7, 1222 |
| BsrDI | GCAATG | 2 cut(s) | 31, 717 |
| BssECI | CCNNGG | 2 cut(s) | 999, 1558 |
| BssMI | GATC | 5 cut(s) | 585, 796, 976, 1056, 1687 |
| BssT1I | CCWWGG | 1 cut(s) | 999 |
| Bst2UI | CCWGG | 1 cut(s) | 138 |
| Bst4CI | ACNGT | 8 cut(s) | 411, 680, 757, 865, 938, 1043, 1117, 1684 |
| Bst6I | CTCTTC | 1 cut(s) | 725 |
| BstBI | TTCGAA | 2 cut(s) | 7, 1222 |
| BstC8I | GCNNGC | 2 cut(s) | 525, 644 |
| BstDEI | CTNAG | 4 cut(s) | 403, 492, 724, 1289 |
| BstDSI | CCRYGG | 1 cut(s) | 999 |
| BstF5I | GGATG | 5 cut(s) | 133, 181, 644, 849, 934 |
| BstKTI | GATC | 5 cut(s) | 588, 799, 979, 1059, 1690 |
| BstMAI | GTCTC | 3 cut(s) | 118, 866, 1574 |
| BstMBI | GATC | 5 cut(s) | 585, 796, 976, 1056, 1687 |
| BstNI | CCWGG | 1 cut(s) | 138 |
| BstSCI | CCNGG | 1 cut(s) | 136 |
| BstSFI | CTRYAG | 4 cut(s) | 282, 521, 1593, 1632 |
| BstV1I | GCAGC | 5 cut(s) | 4, 51, 484, 507, 614 |
| BstV2I | GAAGAC | 2 cut(s) | 419, 1384 |
| BstX2I | RGATCY | 2 cut(s) | 796, 1687 |
| BstYI | RGATCY | 2 cut(s) | 796, 1687 |
| Bsu15I | ATCGAT | 1 cut(s) | 1059 |
| Bsu36I | CCTNAGG | 1 cut(s) | 492 |
| BsuI | GTATCC | 3 cut(s) | 685, 1031, 1672 |
| BsuRI | GGCC | 4 cut(s) | 1067, 1206, 1248, 1473 |
| BsuTUI | ATCGAT | 1 cut(s) | 1059 |
| BtgI | CCRYGG | 1 cut(s) | 999 |
| BtsCI | GGATG | 5 cut(s) | 133, 181, 644, 849, 934 |
| BveI | ACCTGC | 1 cut(s) | 518 |
| Cac8I | GCNNGC | 2 cut(s) | 525, 644 |
| ClaI | ATCGAT | 1 cut(s) | 1059 |
| Csp6I | GTAC | 1 cut(s) | 1539 |
| CviAII | CATG | 6 cut(s) | 106, 184, 194, 583, 1000, 1704 |
| CviQI | GTAC | 1 cut(s) | 1539 |
| DdeI | CTNAG | 4 cut(s) | 403, 492, 724, 1289 |
| DpnI | GATC | 5 cut(s) | 587, 798, 978, 1058, 1689 |
| DpnII | GATC | 5 cut(s) | 585, 796, 976, 1056, 1687 |
| EaeI | YGGCCR | 1 cut(s) | 1204 |
| Eam1104I | CTCTTC | 1 cut(s) | 725 |
| EarI | CTCTTC | 1 cut(s) | 725 |
| EciI | GGCGGA | 1 cut(s) | 207 |
| Eco130I | CCWWGG | 1 cut(s) | 999 |
| Eco147I | AGGCCT | 1 cut(s) | 1473 |
| Eco24I | GRGCYC | 1 cut(s) | 998 |
| Eco32I | GATATC | 2 cut(s) | 143, 892 |
| Eco57I | CTGAAG | 1 cut(s) | 373 |
| Eco81I | CCTNAGG | 1 cut(s) | 492 |
| EcoRII | CCWGG | 1 cut(s) | 136 |
| EcoRV | GATATC | 2 cut(s) | 143, 892 |
| EcoT14I | CCWWGG | 1 cut(s) | 999 |
| EcoT22I | ATGCAT | 1 cut(s) | 1642 |
| EcoT38I | GRGCYC | 1 cut(s) | 998 |
| ErhI | CCWWGG | 1 cut(s) | 999 |
| Esp3I | CGTCTC | 1 cut(s) | 866 |
| FaeI | CATG | 6 cut(s) | 109, 187, 197, 586, 1003, 1707 |
| FaqI | GGGAC | 1 cut(s) | 218 |
| FatI | CATG | 6 cut(s) | 105, 183, 193, 582, 999, 1703 |
| FauI | CCCGC | 1 cut(s) | 651 |
| FblI | GTMKAC | 1 cut(s) | 256 |
| Fnu4HI | GCNGC | 6 cut(s) | 18, 37, 40, 498, 521, 603 |
| FokI | GGATG | 5 cut(s) | 120, 188, 651, 856, 941 |
| FriOI | GRGCYC | 1 cut(s) | 998 |
| Fsp4HI | GCNGC | 6 cut(s) | 18, 37, 40, 498, 521, 603 |
| FspBI | CTAG | 1 cut(s) | 1280 |
| GluI | GCNGC | 6 cut(s) | 18, 37, 40, 498, 521, 603 |
| GsaI | CCCAGC | 1 cut(s) | 1368 |
| HaeIII | GGCC | 4 cut(s) | 1067, 1206, 1248, 1473 |
| Hin1II | CATG | 6 cut(s) | 109, 187, 197, 586, 1003, 1707 |
| HincII | GTYRAC | 2 cut(s) | 97, 257 |
| HindII | GTYRAC | 2 cut(s) | 97, 257 |
| HinfI | GANTC | 7 cut(s) | 4, 376, 778, 880, 1376, 1450, 1715 |
| HphI | GGTGA | 2 cut(s) | 502, 796 |
| Hpy166II | GTNNAC | 5 cut(s) | 97, 257, 552, 1333, 1500 |
| Hpy188I | TCNGA | 6 cut(s) | 590, 727, 1014, 1189, 1559, 1724 |
| Hpy188III | TCNNGA | 6 cut(s) | 83, 123, 329, 794, 1082, 1607 |
| Hpy8I | GTNNAC | 5 cut(s) | 97, 257, 552, 1333, 1500 |
| HpyAV | CCTTC | 6 cut(s) | 231, 457, 817, 833, 1295, 1343 |
| HpyCH4III | ACNGT | 8 cut(s) | 411, 680, 757, 865, 938, 1043, 1117, 1684 |
| HpyCH4IV | ACGT | 1 cut(s) | 1436 |
| HpyF3I | CTNAG | 4 cut(s) | 403, 492, 724, 1289 |
| HpySE526I | ACGT | 1 cut(s) | 1436 |
| Hsp92II | CATG | 6 cut(s) | 109, 187, 197, 586, 1003, 1707 |
| Kzo9I | GATC | 5 cut(s) | 585, 796, 976, 1056, 1687 |
| LmnI | GCTCC | 2 cut(s) | 1001, 1099 |
| Lsp1109I | GCAGC | 5 cut(s) | 4, 51, 484, 507, 614 |
| LweI | GCATC | 7 cut(s) | 166, 629, 697, 1159, 1423, 1627, 1649 |
| MaeI | CTAG | 1 cut(s) | 1280 |
| MaeII | ACGT | 1 cut(s) | 1436 |
| MaeIII | GTNAC | 6 cut(s) | 160, 612, 760, 932, 1117, 1253 |
| MalI | GATC | 5 cut(s) | 587, 798, 978, 1058, 1689 |
| MboI | GATC | 5 cut(s) | 585, 796, 976, 1056, 1687 |
| MboII | GAAGA | 7 cut(s) | 216, 406, 419, 634, 712, 1384, 1409 |
| MflI | RGATCY | 2 cut(s) | 796, 1687 |
| MhlI | GDGCHC | 1 cut(s) | 998 |
| MlsI | TGGCCA | 1 cut(s) | 1206 |
| MluCI | AATT | 8 cut(s) | 100, 266, 321, 358, 419, 1283, 1492, 1551 |
| MluNI | TGGCCA | 1 cut(s) | 1206 |
| MmeI | TCCRAC | 1 cut(s) | 1293 |
| Mox20I | TGGCCA | 1 cut(s) | 1206 |
| Mph1103I | ATGCAT | 1 cut(s) | 1642 |
| MroXI | GAANNNNTTC | 3 cut(s) | 201, 719, 1602 |
| MscI | TGGCCA | 1 cut(s) | 1206 |
| MseI | TTAA | 5 cut(s) | 345, 357, 1005, 1478, 1710 |
| MslI | CAYNNNNRTG | 2 cut(s) | 84, 515 |
| Msp20I | TGGCCA | 1 cut(s) | 1206 |
| MspR9I | CCNGG | 1 cut(s) | 138 |
| MvaI | CCWGG | 1 cut(s) | 138 |
| NcoI | CCATGG | 1 cut(s) | 999 |
| NdeII | GATC | 5 cut(s) | 585, 796, 976, 1056, 1687 |
| NlaIII | CATG | 6 cut(s) | 109, 187, 197, 586, 1003, 1707 |
| NlaIV | GGNNCC | 1 cut(s) | 997 |
| NmuCI | GTSAC | 1 cut(s) | 160 |
| NsiI | ATGCAT | 1 cut(s) | 1642 |
| NspV | TTCGAA | 2 cut(s) | 7, 1222 |
| PceI | AGGCCT | 1 cut(s) | 1473 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 855 |
| PdmI | GAANNNNTTC | 3 cut(s) | 201, 719, 1602 |
| PfeI | GAWTC | 7 cut(s) | 4, 376, 778, 880, 1376, 1450, 1715 |
| PfoI | TCCNGGA | 1 cut(s) | 136 |
| PkrI | GCNGC | 6 cut(s) | 19, 38, 41, 499, 522, 604 |
| PshBI | ATTAAT | 1 cut(s) | 357 |
| PsiI | TTATAA | 2 cut(s) | 1125, 1230 |
| Psp6I | CCWGG | 1 cut(s) | 136 |
| PspFI | CCCAGC | 1 cut(s) | 1364 |
| PspGI | CCWGG | 1 cut(s) | 136 |
| PspN4I | GGNNCC | 1 cut(s) | 997 |
| PstI | CTGCAG | 3 cut(s) | 286, 525, 1636 |
| PsuI | RGATCY | 2 cut(s) | 796, 1687 |
| RsaI | GTAC | 1 cut(s) | 1540 |
| RsaNI | GTAC | 1 cut(s) | 1539 |
| RseI | CAYNNNNRTG | 2 cut(s) | 84, 515 |
| SalI | GTCGAC | 1 cut(s) | 255 |
| SaqAI | TTAA | 5 cut(s) | 345, 357, 1005, 1478, 1710 |
| SatI | GCNGC | 6 cut(s) | 18, 37, 40, 498, 521, 603 |
| Sau3AI | GATC | 5 cut(s) | 585, 796, 976, 1056, 1687 |
| ScrFI | CCNGG | 1 cut(s) | 138 |
| SduI | GDGCHC | 1 cut(s) | 998 |
| SfaNI | GCATC | 7 cut(s) | 166, 629, 697, 1159, 1423, 1627, 1649 |
| SfcI | CTRYAG | 4 cut(s) | 282, 521, 1593, 1632 |
| SfuI | TTCGAA | 2 cut(s) | 7, 1222 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 84, 515 |
| Sse9I | AATT | 8 cut(s) | 100, 266, 321, 358, 419, 1283, 1492, 1551 |
| SseBI | AGGCCT | 1 cut(s) | 1473 |
| SsiI | CCGC | 4 cut(s) | 36, 218, 644, 1432 |
| SspI | AATATT | 3 cut(s) | 154, 1234, 1324 |
| SspMI | CTAG | 1 cut(s) | 1280 |
| StuI | AGGCCT | 1 cut(s) | 1473 |
| StyD4I | CCNGG | 1 cut(s) | 136 |
| StyI | CCWWGG | 1 cut(s) | 999 |
| TaaI | ACNGT | 8 cut(s) | 411, 680, 757, 865, 938, 1043, 1117, 1684 |
| TaiI | ACGT | 1 cut(s) | 1439 |
| TaqI | TCGA | 6 cut(s) | 7, 122, 145, 256, 1059, 1222 |
| TasI | AATT | 8 cut(s) | 100, 266, 321, 358, 419, 1283, 1492, 1551 |
| TauI | GCSGC | 1 cut(s) | 39 |
| TfiI | GAWTC | 7 cut(s) | 4, 376, 778, 880, 1376, 1450, 1715 |
| Tru1I | TTAA | 5 cut(s) | 345, 357, 1005, 1478, 1710 |
| Tru9I | TTAA | 5 cut(s) | 345, 357, 1005, 1478, 1710 |
| TseFI | GTSAC | 1 cut(s) | 160 |
| TseI | GCWGC | 5 cut(s) | 17, 39, 497, 520, 602 |
| Tsp45I | GTSAC | 1 cut(s) | 160 |
| TspDTI | ATGAA | 5 cut(s) | 94, 107, 210, 728, 1523 |
| TspGWI | ACGGA | 1 cut(s) | 1050 |
| VspI | ATTAAT | 1 cut(s) | 357 |
| XapI | RAATTY | 1 cut(s) | 1492 |
| XmiI | GTMKAC | 1 cut(s) | 256 |
| XmnI | GAANNNNTTC | 3 cut(s) | 201, 719, 1602 |
| XspI | CTAG | 1 cut(s) | 1280 |
| Zsp2I | ATGCAT | 1 cut(s) | 1642 |