Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 987 |
| AccB1I | GGYRCC | 1 cut(s) | 359 |
| AciI | CCGC | 2 cut(s) | 1016, 1398 |
| AcoI | YGGCCR | 1 cut(s) | 1066 |
| AcyI | GRCGYC | 1 cut(s) | 13 |
| AhlI | ACTAGT | 1 cut(s) | 496 |
| AluBI | AGCT | 2 cut(s) | 614, 1226 |
| AluI | AGCT | 2 cut(s) | 614, 1226 |
| AoxI | GGCC | 5 cut(s) | 52, 205, 598, 1066, 1333 |
| ApeKI | GCWGC | 2 cut(s) | 296, 401 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 124, 518 |
| AspS9I | GGNCC | 3 cut(s) | 52, 205, 1401 |
| AsuC2I | CCSGG | 1 cut(s) | 1421 |
| AsuHPI | GGTGA | 2 cut(s) | 232, 649 |
| AvaII | GGWCC | 1 cut(s) | 1401 |
| AxyI | CCTNAGG | 2 cut(s) | 291, 1134 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 483, 516 |
| BalI | TGGCCA | 1 cut(s) | 1068 |
| BanI | GGYRCC | 1 cut(s) | 359 |
| BbsI | GAAGAC | 2 cut(s) | 1027, 1246 |
| BbvI | GCAGC | 2 cut(s) | 308, 388 |
| BccI | CCATC | 6 cut(s) | 418, 476, 700, 785, 995, 1388 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 454, 488 |
| BciVI | GTATCC | 1 cut(s) | 484 |
| BclI | TGATCA | 1 cut(s) | 258 |
| BcnI | CCSGG | 1 cut(s) | 1421 |
| BcuI | ACTAGT | 1 cut(s) | 496 |
| BfaI | CTAG | 3 cut(s) | 116, 497, 551 |
| BfmI | CTRYAG | 1 cut(s) | 460 |
| BfuI | GTATCC | 1 cut(s) | 484 |
| BisI | GCNGC | 2 cut(s) | 297, 402 |
| BlpI | GCTNAGC | 1 cut(s) | 848 |
| BlsI | GCNGC | 2 cut(s) | 298, 403 |
| Bme1390I | CCNGG | 1 cut(s) | 1421 |
| Bme18I | GGWCC | 1 cut(s) | 1401 |
| BmgT120I | GGNCC | 3 cut(s) | 52, 205, 1401 |
| BmiI | GGNNCC | 3 cut(s) | 361, 859, 1402 |
| BmrFI | CCNGG | 1 cut(s) | 1421 |
| BmsI | GCATC | 4 cut(s) | 428, 1044, 1096, 1454 |
| BpiI | GAAGAC | 2 cut(s) | 1027, 1246 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1241, 1273 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 848 |
| BpuMI | CCSGG | 1 cut(s) | 1421 |
| BsaHI | GRCGYC | 1 cut(s) | 13 |
| BsaJI | CCNNGG | 2 cut(s) | 861, 1420 |
| Bse1I | ACTGG | 2 cut(s) | 391, 601 |
| Bse21I | CCTNAGG | 2 cut(s) | 291, 1134 |
| BseDI | CCNNGG | 2 cut(s) | 861, 1420 |
| BseGI | GGATG | 5 cut(s) | 332, 349, 443, 711, 796 |
| BseMII | CTCAG | 2 cut(s) | 134, 282 |
| BseNI | ACTGG | 2 cut(s) | 391, 601 |
| BseRI | GAGGAG | 1 cut(s) | 822 |
| BseXI | GCAGC | 2 cut(s) | 308, 388 |
| BseYI | CCCAGC | 1 cut(s) | 1226 |
| BshFI | GGCC | 5 cut(s) | 54, 207, 600, 1068, 1335 |
| BshNI | GGYRCC | 1 cut(s) | 359 |
| BsiSI | CCGG | 2 cut(s) | 341, 1420 |
| BslFI | GGGAC | 4 cut(s) | 975, 1332, 1414, 1473 |
| BsmFI | GGGAC | 4 cut(s) | 975, 1332, 1414, 1473 |
| BsnI | GGCC | 5 cut(s) | 54, 207, 600, 1068, 1335 |
| Bsp143I | GATC | 1 cut(s) | 258 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 848 |
| Bsp19I | CCATGG | 1 cut(s) | 861 |
| BspACI | CCGC | 2 cut(s) | 1016, 1398 |
| BspANI | GGCC | 5 cut(s) | 54, 207, 600, 1068, 1335 |
| BspCNI | CTCAG | 2 cut(s) | 135, 283 |
| BspHI | TCATGA | 1 cut(s) | 922 |
| BspLI | GGNNCC | 3 cut(s) | 361, 859, 1402 |
| BspT107I | GGYRCC | 1 cut(s) | 359 |
| BsrI | ACTGG | 2 cut(s) | 391, 601 |
| BssECI | CCNNGG | 2 cut(s) | 861, 1420 |
| BssMI | GATC | 1 cut(s) | 258 |
| BssNI | GRCGYC | 1 cut(s) | 13 |
| BssT1I | CCWWGG | 1 cut(s) | 861 |
| Bst4CI | ACNGT | 8 cut(s) | 167, 398, 479, 676, 727, 779, 1304, 1356 |
| BstACI | GRCGYC | 1 cut(s) | 13 |
| BstC8I | GCNNGC | 2 cut(s) | 443, 803 |
| BstDEI | CTNAG | 5 cut(s) | 143, 291, 848, 1134, 1151 |
| BstDSI | CCRYGG | 1 cut(s) | 861 |
| BstF5I | GGATG | 5 cut(s) | 332, 349, 443, 711, 796 |
| BstKTI | GATC | 1 cut(s) | 261 |
| BstMBI | GATC | 1 cut(s) | 258 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 10, 19, 597, 1451 |
| BstSCI | CCNGG | 1 cut(s) | 1419 |
| BstSFI | CTRYAG | 1 cut(s) | 460 |
| BstV1I | GCAGC | 2 cut(s) | 308, 388 |
| BstV2I | GAAGAC | 2 cut(s) | 1027, 1246 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 727 |
| Bsu36I | CCTNAGG | 2 cut(s) | 291, 1134 |
| BsuI | GTATCC | 1 cut(s) | 484 |
| BsuRI | GGCC | 5 cut(s) | 54, 207, 600, 1068, 1335 |
| BtgI | CCRYGG | 1 cut(s) | 861 |
| BtsCI | GGATG | 5 cut(s) | 332, 349, 443, 711, 796 |
| BtsIMutI | CAGTG | 3 cut(s) | 403, 608, 672 |
| Cac8I | GCNNGC | 2 cut(s) | 443, 803 |
| CciI | TCATGA | 1 cut(s) | 922 |
| Cfr13I | GGNCC | 3 cut(s) | 52, 205, 1401 |
| CseI | GACGC | 2 cut(s) | 2, 695 |
| CviAII | CATG | 4 cut(s) | 382, 736, 862, 923 |
| DdeI | CTNAG | 5 cut(s) | 143, 291, 848, 1134, 1151 |
| DpnI | GATC | 1 cut(s) | 260 |
| DpnII | GATC | 1 cut(s) | 258 |
| EaeI | YGGCCR | 1 cut(s) | 1066 |
| Eco130I | CCWWGG | 1 cut(s) | 861 |
| Eco47I | GGWCC | 1 cut(s) | 1401 |
| Eco81I | CCTNAGG | 2 cut(s) | 291, 1134 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1401 |
| EcoT14I | CCWWGG | 1 cut(s) | 861 |
| EcoT22I | ATGCAT | 1 cut(s) | 954 |
| ErhI | CCWWGG | 1 cut(s) | 861 |
| FaeI | CATG | 4 cut(s) | 385, 739, 865, 926 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1031, 1063 |
| FaqI | GGGAC | 4 cut(s) | 975, 1332, 1414, 1473 |
| FatI | CATG | 4 cut(s) | 381, 735, 861, 922 |
| FauI | CCCGC | 2 cut(s) | 1009, 1391 |
| FbaI | TGATCA | 1 cut(s) | 258 |
| Fnu4HI | GCNGC | 2 cut(s) | 297, 402 |
| FokI | GGATG | 5 cut(s) | 339, 356, 450, 718, 803 |
| Fsp4HI | GCNGC | 2 cut(s) | 297, 402 |
| FspBI | CTAG | 3 cut(s) | 116, 497, 551 |
| GluI | GCNGC | 2 cut(s) | 297, 402 |
| GsaI | CCCAGC | 1 cut(s) | 1230 |
| HaeIII | GGCC | 5 cut(s) | 54, 207, 600, 1068, 1335 |
| HapII | CCGG | 2 cut(s) | 341, 1420 |
| HgaI | GACGC | 2 cut(s) | 2, 695 |
| Hin1I | GRCGYC | 1 cut(s) | 13 |
| Hin1II | CATG | 4 cut(s) | 385, 739, 865, 926 |
| HincII | GTYRAC | 2 cut(s) | 685, 733 |
| HindII | GTYRAC | 2 cut(s) | 685, 733 |
| HinfI | GANTC | 8 cut(s) | 109, 120, 577, 585, 640, 742, 919, 1238 |
| HpaII | CCGG | 2 cut(s) | 341, 1420 |
| HphI | GGTGA | 2 cut(s) | 232, 649 |
| Hpy166II | GTNNAC | 4 cut(s) | 34, 685, 733, 1195 |
| Hpy188I | TCNGA | 3 cut(s) | 130, 144, 258 |
| Hpy188III | TCNNGA | 5 cut(s) | 551, 923, 971, 1076, 1469 |
| Hpy8I | GTNNAC | 4 cut(s) | 34, 685, 733, 1195 |
| HpyAV | CCTTC | 3 cut(s) | 256, 679, 1205 |
| HpyCH4III | ACNGT | 8 cut(s) | 167, 398, 479, 676, 727, 779, 1304, 1356 |
| HpyCH4IV | ACGT | 1 cut(s) | 555 |
| HpyCH4V | TGCA | 8 cut(s) | 381, 409, 591, 906, 952, 1027, 1057, 1244 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 10, 19, 597, 1451 |
| HpyF3I | CTNAG | 5 cut(s) | 143, 291, 848, 1134, 1151 |
| HpySE526I | ACGT | 1 cut(s) | 555 |
| Hsp92I | GRCGYC | 1 cut(s) | 13 |
| Hsp92II | CATG | 4 cut(s) | 385, 739, 865, 926 |
| Ksp22I | TGATCA | 1 cut(s) | 258 |
| Kzo9I | GATC | 1 cut(s) | 258 |
| Lsp1109I | GCAGC | 2 cut(s) | 308, 388 |
| LweI | GCATC | 4 cut(s) | 428, 1044, 1096, 1454 |
| MaeI | CTAG | 3 cut(s) | 116, 497, 551 |
| MaeII | ACGT | 1 cut(s) | 555 |
| MaeIII | GTNAC | 3 cut(s) | 238, 559, 794 |
| MalI | GATC | 1 cut(s) | 260 |
| MboI | GATC | 1 cut(s) | 258 |
| MboII | GAAGA | 5 cut(s) | 205, 433, 440, 1032, 1246 |
| MfeI | CAATTG | 1 cut(s) | 157 |
| MlsI | TGGCCA | 1 cut(s) | 1068 |
| MluCI | AATT | 7 cut(s) | 157, 209, 218, 410, 1145, 1233, 1413 |
| MluNI | TGGCCA | 1 cut(s) | 1068 |
| MlyI | GAGTC | 4 cut(s) | 118, 594, 649, 913 |
| MmeI | TCCRAC | 1 cut(s) | 1155 |
| Mox20I | TGGCCA | 1 cut(s) | 1068 |
| Mph1103I | ATGCAT | 1 cut(s) | 954 |
| MroXI | GAANNNNTTC | 2 cut(s) | 124, 518 |
| MscI | TGGCCA | 1 cut(s) | 1068 |
| MseI | TTAA | 4 cut(s) | 365, 867, 894, 1314 |
| MslI | CAYNNNNRTG | 1 cut(s) | 527 |
| Msp20I | TGGCCA | 1 cut(s) | 1068 |
| MspI | CCGG | 2 cut(s) | 341, 1420 |
| MspR9I | CCNGG | 1 cut(s) | 1421 |
| MunI | CAATTG | 1 cut(s) | 157 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 10, 19, 597, 1451 |
| NciI | CCSGG | 1 cut(s) | 1421 |
| NcoI | CCATGG | 1 cut(s) | 861 |
| NdeII | GATC | 1 cut(s) | 258 |
| NlaIII | CATG | 4 cut(s) | 385, 739, 865, 926 |
| NlaIV | GGNNCC | 3 cut(s) | 361, 859, 1402 |
| NmuCI | GTSAC | 1 cut(s) | 238 |
| NsiI | ATGCAT | 1 cut(s) | 954 |
| PagI | TCATGA | 1 cut(s) | 922 |
| PdmI | GAANNNNTTC | 2 cut(s) | 124, 518 |
| PfeI | GAWTC | 4 cut(s) | 120, 577, 742, 1238 |
| PkrI | GCNGC | 2 cut(s) | 298, 403 |
| PleI | GAGTC | 4 cut(s) | 117, 593, 648, 913 |
| PpsI | GAGTC | 4 cut(s) | 117, 593, 648, 913 |
| PpuMI | RGGWCCY | 1 cut(s) | 1401 |
| PsiI | TTATAA | 1 cut(s) | 987 |
| Psp5II | RGGWCCY | 1 cut(s) | 1401 |
| PspFI | CCCAGC | 1 cut(s) | 1226 |
| PspN4I | GGNNCC | 3 cut(s) | 361, 859, 1402 |
| PspPI | GGNCC | 3 cut(s) | 52, 205, 1401 |
| PspPPI | RGGWCCY | 1 cut(s) | 1401 |
| RseI | CAYNNNNRTG | 1 cut(s) | 527 |
| SaqAI | TTAA | 4 cut(s) | 365, 867, 894, 1314 |
| SatI | GCNGC | 2 cut(s) | 297, 402 |
| Sau3AI | GATC | 1 cut(s) | 258 |
| Sau96I | GGNCC | 3 cut(s) | 52, 205, 1401 |
| SchI | GAGTC | 4 cut(s) | 118, 594, 649, 913 |
| ScrFI | CCNGG | 1 cut(s) | 1421 |
| SfaNI | GCATC | 4 cut(s) | 428, 1044, 1096, 1454 |
| SfcI | CTRYAG | 1 cut(s) | 460 |
| SinI | GGWCC | 1 cut(s) | 1401 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 527 |
| SpeI | ACTAGT | 1 cut(s) | 496 |
| Sse9I | AATT | 7 cut(s) | 157, 209, 218, 410, 1145, 1233, 1413 |
| SsiI | CCGC | 2 cut(s) | 1016, 1398 |
| SspI | AATATT | 2 cut(s) | 77, 1186 |
| SspMI | CTAG | 3 cut(s) | 116, 497, 551 |
| StyD4I | CCNGG | 1 cut(s) | 1419 |
| StyI | CCWWGG | 1 cut(s) | 861 |
| TaaI | ACNGT | 8 cut(s) | 167, 398, 479, 676, 727, 779, 1304, 1356 |
| TaiI | ACGT | 1 cut(s) | 558 |
| TaqI | TCGA | 1 cut(s) | 474 |
| TasI | AATT | 7 cut(s) | 157, 209, 218, 410, 1145, 1233, 1413 |
| TfiI | GAWTC | 4 cut(s) | 120, 577, 742, 1238 |
| Tru1I | TTAA | 4 cut(s) | 365, 867, 894, 1314 |
| Tru9I | TTAA | 4 cut(s) | 365, 867, 894, 1314 |
| TscAI | CASTG | 3 cut(s) | 403, 608, 679 |
| TseFI | GTSAC | 1 cut(s) | 238 |
| TseI | GCWGC | 2 cut(s) | 296, 401 |
| Tsp45I | GTSAC | 1 cut(s) | 238 |
| TspDTI | ATGAA | 3 cut(s) | 519, 645, 1175 |
| TspGWI | ACGGA | 1 cut(s) | 912 |
| TspRI | CASTG | 3 cut(s) | 403, 608, 679 |
| VpaK11BI | GGWCC | 1 cut(s) | 1401 |
| XbaI | TCTAGA | 1 cut(s) | 550 |
| XmnI | GAANNNNTTC | 2 cut(s) | 124, 518 |
| XspI | CTAG | 3 cut(s) | 116, 497, 551 |
| Zsp2I | ATGCAT | 1 cut(s) | 954 |