Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 26 |
| Acc16I | TGCGCA | 1 cut(s) | 899 |
| AccBSI | CCGCTC | 1 cut(s) | 1432 |
| AccII | CGCG | 1 cut(s) | 241 |
| AciI | CCGC | 3 cut(s) | 474, 1250, 1432 |
| AcoI | YGGCCR | 1 cut(s) | 1300 |
| AcsI | RAATTY | 2 cut(s) | 443, 1257 |
| AcyI | GRCGYC | 1 cut(s) | 23 |
| AfaI | GTAC | 1 cut(s) | 82 |
| AluBI | AGCT | 5 cut(s) | 635, 848, 1276, 1379, 1442 |
| AluI | AGCT | 5 cut(s) | 635, 848, 1276, 1379, 1442 |
| Alw26I | GTCTC | 1 cut(s) | 165 |
| AoxI | GGCC | 2 cut(s) | 832, 1300 |
| ApeKI | GCWGC | 8 cut(s) | 51, 54, 57, 60, 63, 113, 530, 635 |
| ApoI | RAATTY | 2 cut(s) | 443, 1257 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 218, 231, 1200 |
| AspLEI | GCGC | 1 cut(s) | 900 |
| AsuHPI | GGTGA | 3 cut(s) | 170, 535, 883 |
| BalI | TGGCCA | 1 cut(s) | 1302 |
| BanII | GRGCYC | 1 cut(s) | 1094 |
| BbsI | GAAGAC | 2 cut(s) | 26, 452 |
| BbvI | GCAGC | 8 cut(s) | 63, 66, 69, 72, 75, 100, 517, 622 |
| BccI | CCATC | 7 cut(s) | 7, 168, 652, 710, 934, 1019, 1229 |
| BcgI | CGANNNNNNTGC | 3 cut(s) | 688, 722, 1440 |
| BciVI | GTATCC | 1 cut(s) | 39 |
| BclI | TGATCA | 1 cut(s) | 736 |
| BcoDI | GTCTC | 1 cut(s) | 165 |
| BfaI | CTAG | 3 cut(s) | 150, 554, 771 |
| BfmI | CTRYAG | 1 cut(s) | 315 |
| BfuI | GTATCC | 1 cut(s) | 39 |
| BisI | GCNGC | 9 cut(s) | 52, 55, 58, 61, 64, 114, 474, 531, 636 |
| BlsI | GCNGC | 9 cut(s) | 53, 56, 59, 62, 65, 115, 475, 532, 637 |
| BmiI | GGNNCC | 1 cut(s) | 1093 |
| BmsI | GCATC | 5 cut(s) | 196, 662, 715, 891, 1278 |
| BpiI | GAAGAC | 2 cut(s) | 26, 452 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 160, 192 |
| BsaAI | YACGTR | 2 cut(s) | 536, 1008 |
| BsaHI | GRCGYC | 1 cut(s) | 23 |
| BsaI | GGTCTC | 1 cut(s) | 165 |
| BsaJI | CCNNGG | 1 cut(s) | 1095 |
| Bse1I | ACTGG | 1 cut(s) | 835 |
| Bse3DI | GCAATG | 1 cut(s) | 1298 |
| BseDI | CCNNGG | 1 cut(s) | 1095 |
| BseGI | GGATG | 8 cut(s) | 211, 321, 583, 677, 730, 945, 1030, 1306 |
| BseMI | GCAATG | 1 cut(s) | 1298 |
| BseMII | CTCAG | 3 cut(s) | 516, 771, 1298 |
| BseNI | ACTGG | 1 cut(s) | 835 |
| BseRI | GAGGAG | 1 cut(s) | 1056 |
| BseXI | GCAGC | 8 cut(s) | 63, 66, 69, 72, 75, 100, 517, 622 |
| BsgI | GTGCAG | 1 cut(s) | 516 |
| Bsh1236I | CGCG | 1 cut(s) | 241 |
| BshFI | GGCC | 2 cut(s) | 834, 1302 |
| BsiSI | CCGG | 1 cut(s) | 575 |
| BslFI | GGGAC | 1 cut(s) | 1449 |
| BsmAI | GTCTC | 1 cut(s) | 165 |
| BsmFI | GGGAC | 1 cut(s) | 1449 |
| BsmI | GAATGC | 1 cut(s) | 743 |
| BsnI | GGCC | 2 cut(s) | 834, 1302 |
| Bso31I | GGTCTC | 1 cut(s) | 165 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1094 |
| Bsp143I | GATC | 2 cut(s) | 736, 1072 |
| Bsp19I | CCATGG | 1 cut(s) | 1095 |
| BspACI | CCGC | 3 cut(s) | 474, 1250, 1432 |
| BspANI | GGCC | 2 cut(s) | 834, 1302 |
| BspCNI | CTCAG | 3 cut(s) | 517, 770, 1297 |
| BspFNI | CGCG | 1 cut(s) | 241 |
| BspLI | GGNNCC | 1 cut(s) | 1093 |
| BspMAI | CTGCAG | 1 cut(s) | 319 |
| BspQI | GCTCTTC | 1 cut(s) | 1283 |
| BspTNI | GGTCTC | 1 cut(s) | 165 |
| BsrBI | CCGCTC | 1 cut(s) | 1432 |
| BsrDI | GCAATG | 1 cut(s) | 1298 |
| BsrI | ACTGG | 1 cut(s) | 835 |
| BssECI | CCNNGG | 1 cut(s) | 1095 |
| BssMI | GATC | 2 cut(s) | 736, 1072 |
| BssNI | GRCGYC | 1 cut(s) | 23 |
| BssT1I | CCWWGG | 1 cut(s) | 1095 |
| Bst4CI | ACNGT | 7 cut(s) | 401, 713, 790, 961, 1034, 1213, 1344 |
| Bst6I | CTCTTC | 3 cut(s) | 70, 758, 1283 |
| BstACI | GRCGYC | 1 cut(s) | 23 |
| BstBAI | YACGTR | 2 cut(s) | 536, 1008 |
| BstC8I | GCNNGC | 2 cut(s) | 239, 677 |
| BstDEI | CTNAG | 3 cut(s) | 525, 757, 1284 |
| BstDSI | CCRYGG | 1 cut(s) | 1095 |
| BstEII | GGTNACC | 1 cut(s) | 583 |
| BstF5I | GGATG | 8 cut(s) | 211, 321, 583, 677, 730, 945, 1030, 1306 |
| BstFNI | CGCG | 1 cut(s) | 241 |
| BstHHI | GCGC | 1 cut(s) | 900 |
| BstKTI | GATC | 2 cut(s) | 739, 1075 |
| BstMAI | GTCTC | 1 cut(s) | 165 |
| BstMBI | GATC | 2 cut(s) | 736, 1072 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 57, 60, 63, 69, 113, 238, 247, 831 |
| BstPI | GGTNACC | 1 cut(s) | 583 |
| BstSFI | CTRYAG | 1 cut(s) | 315 |
| BstUI | CGCG | 1 cut(s) | 241 |
| BstV1I | GCAGC | 8 cut(s) | 63, 66, 69, 72, 75, 100, 517, 622 |
| BstV2I | GAAGAC | 2 cut(s) | 26, 452 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 961 |
| BsuI | GTATCC | 1 cut(s) | 39 |
| BsuRI | GGCC | 2 cut(s) | 834, 1302 |
| BtgI | CCRYGG | 1 cut(s) | 1095 |
| BtsCI | GGATG | 8 cut(s) | 211, 321, 583, 677, 730, 945, 1030, 1306 |
| BtsIMutI | CAGTG | 1 cut(s) | 842 |
| Cac8I | GCNNGC | 2 cut(s) | 239, 677 |
| CfoI | GCGC | 1 cut(s) | 900 |
| CseI | GACGC | 1 cut(s) | 230 |
| Csp6I | GTAC | 1 cut(s) | 81 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1213, 1248 |
| CviAII | CATG | 3 cut(s) | 224, 616, 1096 |
| CviQI | GTAC | 1 cut(s) | 81 |
| DdeI | CTNAG | 3 cut(s) | 525, 757, 1284 |
| DpnI | GATC | 2 cut(s) | 738, 1074 |
| DpnII | GATC | 2 cut(s) | 736, 1072 |
| DraI | TTTAAA | 1 cut(s) | 334 |
| EaeI | YGGCCR | 1 cut(s) | 1300 |
| Eam1104I | CTCTTC | 3 cut(s) | 70, 758, 1283 |
| EarI | CTCTTC | 3 cut(s) | 70, 758, 1283 |
| Eco130I | CCWWGG | 1 cut(s) | 1095 |
| Eco24I | GRGCYC | 1 cut(s) | 1094 |
| Eco31I | GGTCTC | 1 cut(s) | 165 |
| Eco91I | GGTNACC | 1 cut(s) | 583 |
| EcoO65I | GGTNACC | 1 cut(s) | 583 |
| EcoRI | GAATTC | 1 cut(s) | 1257 |
| EcoT14I | CCWWGG | 1 cut(s) | 1095 |
| EcoT38I | GRGCYC | 1 cut(s) | 1094 |
| ErhI | CCWWGG | 1 cut(s) | 1095 |
| FaeI | CATG | 3 cut(s) | 227, 619, 1099 |
| FaqI | GGGAC | 1 cut(s) | 1449 |
| FatI | CATG | 3 cut(s) | 223, 615, 1095 |
| FauI | CCCGC | 2 cut(s) | 1243, 1425 |
| FbaI | TGATCA | 1 cut(s) | 736 |
| Fnu4HI | GCNGC | 9 cut(s) | 52, 55, 58, 61, 64, 114, 474, 531, 636 |
| FokI | GGATG | 8 cut(s) | 218, 308, 590, 684, 737, 952, 1037, 1293 |
| FriOI | GRGCYC | 1 cut(s) | 1094 |
| Fsp4HI | GCNGC | 9 cut(s) | 52, 55, 58, 61, 64, 114, 474, 531, 636 |
| FspAI | RTGCGCAY | 1 cut(s) | 899 |
| FspBI | CTAG | 3 cut(s) | 150, 554, 771 |
| FspI | TGCGCA | 1 cut(s) | 899 |
| GlaI | GCGC | 1 cut(s) | 899 |
| GluI | GCNGC | 9 cut(s) | 52, 55, 58, 61, 64, 114, 474, 531, 636 |
| HaeIII | GGCC | 2 cut(s) | 834, 1302 |
| HapII | CCGG | 1 cut(s) | 575 |
| HgaI | GACGC | 1 cut(s) | 230 |
| HhaI | GCGC | 1 cut(s) | 900 |
| Hin1I | GRCGYC | 1 cut(s) | 23 |
| Hin1II | CATG | 3 cut(s) | 227, 619, 1099 |
| Hin6I | GCGC | 1 cut(s) | 898 |
| HinP1I | GCGC | 1 cut(s) | 898 |
| HinfI | GANTC | 4 cut(s) | 286, 409, 811, 976 |
| HpaII | CCGG | 1 cut(s) | 575 |
| HphI | GGTGA | 3 cut(s) | 170, 535, 883 |
| Hpy188I | TCNGA | 4 cut(s) | 419, 760, 1110, 1287 |
| Hpy188III | TCNNGA | 6 cut(s) | 150, 283, 890, 1205, 1262, 1310 |
| Hpy99I | CGWCG | 1 cut(s) | 28 |
| HpyAV | CCTTC | 9 cut(s) | 42, 195, 208, 261, 490, 598, 913, 929, 1171 |
| HpyCH4III | ACNGT | 7 cut(s) | 401, 713, 790, 961, 1034, 1213, 1344 |
| HpyCH4IV | ACGT | 4 cut(s) | 23, 329, 535, 1007 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 57, 60, 63, 69, 113, 238, 247, 831 |
| HpyF3I | CTNAG | 3 cut(s) | 525, 757, 1284 |
| HpySE526I | ACGT | 4 cut(s) | 23, 329, 535, 1007 |
| Hsp92I | GRCGYC | 1 cut(s) | 23 |
| Hsp92II | CATG | 3 cut(s) | 227, 619, 1099 |
| HspAI | GCGC | 1 cut(s) | 898 |
| Ksp22I | TGATCA | 1 cut(s) | 736 |
| Kzo9I | GATC | 2 cut(s) | 736, 1072 |
| LguI | GCTCTTC | 1 cut(s) | 1283 |
| LmnI | GCTCC | 2 cut(s) | 787, 1097 |
| LpnPI | CCDG | 7 cut(s) | 117, 588, 693, 848, 903, 1218, 1323 |
| Lsp1109I | GCAGC | 8 cut(s) | 63, 66, 69, 72, 75, 100, 517, 622 |
| LweI | GCATC | 5 cut(s) | 196, 662, 715, 891, 1278 |
| MaeI | CTAG | 3 cut(s) | 150, 554, 771 |
| MaeII | ACGT | 4 cut(s) | 23, 329, 535, 1007 |
| MaeIII | GTNAC | 5 cut(s) | 520, 583, 793, 1028, 1213 |
| MalI | GATC | 2 cut(s) | 738, 1074 |
| MbiI | CCGCTC | 1 cut(s) | 1432 |
| MboI | GATC | 2 cut(s) | 736, 1072 |
| MhlI | GDGCHC | 1 cut(s) | 1094 |
| MlsI | TGGCCA | 1 cut(s) | 1302 |
| MluNI | TGGCCA | 1 cut(s) | 1302 |
| MlyI | GAGTC | 1 cut(s) | 280 |
| MmeI | TCCRAC | 1 cut(s) | 809 |
| Mox20I | TGGCCA | 1 cut(s) | 1302 |
| MroXI | GAANNNNTTC | 3 cut(s) | 218, 231, 1200 |
| MscI | TGGCCA | 1 cut(s) | 1302 |
| MseI | TTAA | 2 cut(s) | 333, 1128 |
| MslI | CAYNNNNRTG | 2 cut(s) | 548, 1311 |
| Msp20I | TGGCCA | 1 cut(s) | 1302 |
| MspI | CCGG | 1 cut(s) | 575 |
| MssI | GTTTAAAC | 1 cut(s) | 334 |
| Mva1269I | GAATGC | 1 cut(s) | 743 |
| MvnI | CGCG | 1 cut(s) | 241 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 57, 60, 63, 69, 113, 238, 247, 831 |
| NcoI | CCATGG | 1 cut(s) | 1095 |
| NdeII | GATC | 2 cut(s) | 736, 1072 |
| NlaIII | CATG | 3 cut(s) | 227, 619, 1099 |
| NlaIV | GGNNCC | 1 cut(s) | 1093 |
| NmuCI | GTSAC | 1 cut(s) | 520 |
| NsbI | TGCGCA | 1 cut(s) | 899 |
| PciSI | GCTCTTC | 1 cut(s) | 1283 |
| PctI | GAATGC | 1 cut(s) | 743 |
| PdmI | GAANNNNTTC | 3 cut(s) | 218, 231, 1200 |
| PfeI | GAWTC | 3 cut(s) | 409, 811, 976 |
| PkrI | GCNGC | 9 cut(s) | 53, 56, 59, 62, 65, 115, 475, 532, 637 |
| PleI | GAGTC | 1 cut(s) | 280 |
| PmeI | GTTTAAAC | 1 cut(s) | 334 |
| PpsI | GAGTC | 1 cut(s) | 280 |
| Ppu21I | YACGTR | 2 cut(s) | 536, 1008 |
| PspEI | GGTNACC | 1 cut(s) | 583 |
| PspN4I | GGNNCC | 1 cut(s) | 1093 |
| PstI | CTGCAG | 1 cut(s) | 319 |
| RsaI | GTAC | 1 cut(s) | 82 |
| RsaNI | GTAC | 1 cut(s) | 81 |
| RseI | CAYNNNNRTG | 2 cut(s) | 548, 1311 |
| SapI | GCTCTTC | 1 cut(s) | 1283 |
| SaqAI | TTAA | 2 cut(s) | 333, 1128 |
| SatI | GCNGC | 9 cut(s) | 52, 55, 58, 61, 64, 114, 474, 531, 636 |
| Sau3AI | GATC | 2 cut(s) | 736, 1072 |
| SchI | GAGTC | 1 cut(s) | 280 |
| SduI | GDGCHC | 1 cut(s) | 1094 |
| SfaNI | GCATC | 5 cut(s) | 196, 662, 715, 891, 1278 |
| SfcI | CTRYAG | 1 cut(s) | 315 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 548, 1311 |
| SsiI | CCGC | 3 cut(s) | 474, 1250, 1432 |
| SspMI | CTAG | 3 cut(s) | 150, 554, 771 |
| StyI | CCWWGG | 1 cut(s) | 1095 |
| TaaI | ACNGT | 7 cut(s) | 401, 713, 790, 961, 1034, 1213, 1344 |
| TaiI | ACGT | 4 cut(s) | 26, 332, 538, 1010 |
| TaqI | TCGA | 1 cut(s) | 708 |
| TauI | GCSGC | 1 cut(s) | 476 |
| TfiI | GAWTC | 3 cut(s) | 409, 811, 976 |
| Tru1I | TTAA | 2 cut(s) | 333, 1128 |
| Tru9I | TTAA | 2 cut(s) | 333, 1128 |
| TscAI | CASTG | 1 cut(s) | 842 |
| TseFI | GTSAC | 1 cut(s) | 520 |
| TseI | GCWGC | 8 cut(s) | 51, 54, 57, 60, 63, 113, 530, 635 |
| Tsp45I | GTSAC | 1 cut(s) | 520 |
| TspDTI | ATGAA | 6 cut(s) | 113, 240, 632, 681, 879, 1437 |
| TspGWI | ACGGA | 1 cut(s) | 1146 |
| TspRI | CASTG | 1 cut(s) | 842 |
| XapI | RAATTY | 2 cut(s) | 443, 1257 |
| XbaI | TCTAGA | 1 cut(s) | 149 |
| XmnI | GAANNNNTTC | 3 cut(s) | 218, 231, 1200 |
| XspI | CTAG | 3 cut(s) | 150, 554, 771 |
| ZraI | GACGTC | 1 cut(s) | 24 |