Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1353 |
| AccI | GTMKAC | 1 cut(s) | 1560 |
| AccII | CGCG | 1 cut(s) | 379 |
| AciI | CCGC | 6 cut(s) | 48, 75, 400, 1382, 1764, 1920 |
| AclI | AACGTT | 1 cut(s) | 921 |
| AclWI | GGATC | 4 cut(s) | 138, 1218, 1231, 1910 |
| AcoI | YGGCCR | 2 cut(s) | 72, 1432 |
| AcvI | CACGTG | 1 cut(s) | 93 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 163 |
| AflIII | ACRYGT | 2 cut(s) | 58, 92 |
| AhlI | ACTAGT | 1 cut(s) | 862 |
| AjiI | CACGTC | 1 cut(s) | 59 |
| AleI | CACNNNNGTG | 1 cut(s) | 95 |
| AluBI | AGCT | 3 cut(s) | 770, 980, 1592 |
| AluI | AGCT | 3 cut(s) | 770, 980, 1592 |
| Alw26I | GTCTC | 2 cut(s) | 67, 304 |
| AlwI | GGATC | 4 cut(s) | 138, 1218, 1231, 1910 |
| AoxI | GGCC | 7 cut(s) | 72, 115, 137, 571, 964, 1432, 1699 |
| ApeKI | GCWGC | 2 cut(s) | 662, 767 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 356, 369, 490, 884 |
| AspS9I | GGNCC | 4 cut(s) | 116, 138, 571, 1767 |
| AsuC2I | CCSGG | 2 cut(s) | 158, 1787 |
| AsuHPI | GGTGA | 3 cut(s) | 112, 227, 1015 |
| AvaII | GGWCC | 1 cut(s) | 1767 |
| AxyI | CCTNAGG | 1 cut(s) | 1500 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 849, 882 |
| BalI | TGGCCA | 1 cut(s) | 1434 |
| BamHI | GGATCC | 1 cut(s) | 1223 |
| BbrPI | CACGTG | 1 cut(s) | 93 |
| BbsI | GAAGAC | 4 cut(s) | 61, 584, 1393, 1612 |
| BbvCI | CCTCAGC | 1 cut(s) | 657 |
| BbvI | GCAGC | 2 cut(s) | 674, 779 |
| BccI | CCATC | 7 cut(s) | 97, 784, 842, 1066, 1151, 1361, 1754 |
| BceAI | ACGGC | 2 cut(s) | 130, 646 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 820, 854 |
| BciVI | GTATCC | 1 cut(s) | 850 |
| BclI | TGATCA | 1 cut(s) | 868 |
| BcnI | CCSGG | 2 cut(s) | 158, 1787 |
| BcoDI | GTCTC | 2 cut(s) | 67, 304 |
| BcuI | ACTAGT | 1 cut(s) | 862 |
| BfaI | CTAG | 4 cut(s) | 243, 429, 482, 863 |
| BfmI | CTRYAG | 2 cut(s) | 826, 1860 |
| BfuI | GTATCC | 1 cut(s) | 850 |
| BglII | AGATCT | 1 cut(s) | 411 |
| BisI | GCNGC | 3 cut(s) | 75, 663, 768 |
| BlpI | GCTNAGC | 1 cut(s) | 1214 |
| BlsI | GCNGC | 3 cut(s) | 76, 664, 769 |
| Bme1390I | CCNGG | 2 cut(s) | 158, 1787 |
| Bme18I | GGWCC | 1 cut(s) | 1767 |
| BmgBI | CACGTC | 1 cut(s) | 59 |
| BmgT120I | GGNCC | 4 cut(s) | 116, 138, 571, 1767 |
| BmiI | GGNNCC | 2 cut(s) | 1225, 1768 |
| BmrFI | CCNGG | 2 cut(s) | 158, 1787 |
| BmsI | GCATC | 6 cut(s) | 256, 307, 794, 1410, 1820, 1855 |
| BpiI | GAAGAC | 4 cut(s) | 61, 584, 1393, 1612 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1607, 1639 |
| Bpu10I | CCTNAGC | 1 cut(s) | 657 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1214 |
| BpuMI | CCSGG | 2 cut(s) | 158, 1787 |
| BsaAI | YACGTR | 1 cut(s) | 93 |
| BsaJI | CCNNGG | 5 cut(s) | 249, 628, 1227, 1786, 1902 |
| BsaWI | WCCGGW | 1 cut(s) | 1625 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 43, 73 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 163 |
| Bse1I | ACTGG | 1 cut(s) | 967 |
| Bse21I | CCTNAGG | 1 cut(s) | 1500 |
| BseDI | CCNNGG | 5 cut(s) | 249, 628, 1227, 1786, 1902 |
| BseGI | GGATG | 4 cut(s) | 172, 809, 1077, 1162 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BseMII | CTCAG | 2 cut(s) | 422, 648 |
| BseNI | ACTGG | 1 cut(s) | 967 |
| BseRI | GAGGAG | 1 cut(s) | 1188 |
| BseX3I | CGGCCG | 1 cut(s) | 72 |
| BseXI | GCAGC | 2 cut(s) | 674, 779 |
| BseYI | CCCAGC | 3 cut(s) | 77, 318, 1592 |
| BsgI | GTGCAG | 1 cut(s) | 786 |
| Bsh1236I | CGCG | 1 cut(s) | 379 |
| Bsh1285I | CGRYCG | 1 cut(s) | 75 |
| BshFI | GGCC | 7 cut(s) | 74, 117, 139, 573, 966, 1434, 1701 |
| BsiEI | CGRYCG | 1 cut(s) | 75 |
| BsiSI | CCGG | 3 cut(s) | 158, 1626, 1786 |
| BslFI | GGGAC | 5 cut(s) | 366, 1341, 1698, 1780, 1839 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BsmAI | GTCTC | 2 cut(s) | 67, 304 |
| BsmFI | GGGAC | 5 cut(s) | 366, 1341, 1698, 1780, 1839 |
| BsnI | GGCC | 7 cut(s) | 74, 117, 139, 573, 966, 1434, 1701 |
| Bsp143I | GATC | 5 cut(s) | 130, 411, 868, 1223, 1915 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1214 |
| Bsp19I | CCATGG | 1 cut(s) | 1227 |
| BspACI | CCGC | 6 cut(s) | 48, 75, 400, 1382, 1764, 1920 |
| BspANI | GGCC | 7 cut(s) | 74, 117, 139, 573, 966, 1434, 1701 |
| BspCNI | CTCAG | 2 cut(s) | 421, 649 |
| BspFNI | CGCG | 1 cut(s) | 379 |
| BspHI | TCATGA | 2 cut(s) | 1288, 1946 |
| BspLI | GGNNCC | 2 cut(s) | 1225, 1768 |
| BspMAI | CTGCAG | 1 cut(s) | 1864 |
| BspPI | GGATC | 4 cut(s) | 138, 1218, 1231, 1910 |
| BsrI | ACTGG | 1 cut(s) | 967 |
| BssECI | CCNNGG | 5 cut(s) | 249, 628, 1227, 1786, 1902 |
| BssMI | GATC | 5 cut(s) | 130, 411, 868, 1223, 1915 |
| BssT1I | CCWWGG | 3 cut(s) | 249, 1227, 1902 |
| Bst6I | CTCTTC | 3 cut(s) | 179, 225, 890 |
| BstBAI | YACGTR | 1 cut(s) | 93 |
| BstC8I | GCNNGC | 3 cut(s) | 345, 809, 1169 |
| BstDEI | CTNAG | 5 cut(s) | 408, 657, 1214, 1500, 1517 |
| BstDSI | CCRYGG | 2 cut(s) | 628, 1227 |
| BstF5I | GGATG | 4 cut(s) | 172, 809, 1077, 1162 |
| BstFNI | CGCG | 1 cut(s) | 379 |
| BstKTI | GATC | 5 cut(s) | 133, 414, 871, 1226, 1918 |
| BstMAI | GTCTC | 2 cut(s) | 67, 304 |
| BstMBI | GATC | 5 cut(s) | 130, 411, 868, 1223, 1915 |
| BstMCI | CGRYCG | 1 cut(s) | 75 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 376, 385, 662, 963, 1817 |
| BstNSI | RCATGY | 1 cut(s) | 347 |
| BstSCI | CCNGG | 2 cut(s) | 156, 1785 |
| BstSFI | CTRYAG | 2 cut(s) | 826, 1860 |
| BstUI | CGCG | 1 cut(s) | 379 |
| BstV1I | GCAGC | 2 cut(s) | 674, 779 |
| BstV2I | GAAGAC | 4 cut(s) | 61, 584, 1393, 1612 |
| BstX2I | RGATCY | 3 cut(s) | 411, 1223, 1915 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1093 |
| BstYI | RGATCY | 3 cut(s) | 411, 1223, 1915 |
| BstZI | CGGCCG | 1 cut(s) | 72 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1500 |
| BsuI | GTATCC | 1 cut(s) | 850 |
| BsuRI | GGCC | 7 cut(s) | 74, 117, 139, 573, 966, 1434, 1701 |
| BtgI | CCRYGG | 2 cut(s) | 628, 1227 |
| BtrI | CACGTC | 1 cut(s) | 59 |
| BtsCI | GGATG | 4 cut(s) | 172, 809, 1077, 1162 |
| BtsIMutI | CAGTG | 5 cut(s) | 65, 221, 769, 974, 1038 |
| Cac8I | GCNNGC | 3 cut(s) | 345, 809, 1169 |
| CciI | TCATGA | 2 cut(s) | 1288, 1946 |
| Cfr13I | GGNCC | 4 cut(s) | 116, 138, 571, 1767 |
| CseI | GACGC | 2 cut(s) | 368, 1061 |
| CviAII | CATG | 7 cut(s) | 344, 748, 1102, 1228, 1289, 1472, 1947 |
| DdeI | CTNAG | 5 cut(s) | 408, 657, 1214, 1500, 1517 |
| DpnI | GATC | 5 cut(s) | 132, 413, 870, 1225, 1917 |
| DpnII | GATC | 5 cut(s) | 130, 411, 868, 1223, 1915 |
| EaeI | YGGCCR | 2 cut(s) | 72, 1432 |
| EagI | CGGCCG | 1 cut(s) | 72 |
| Eam1104I | CTCTTC | 3 cut(s) | 179, 225, 890 |
| EarI | CTCTTC | 3 cut(s) | 179, 225, 890 |
| EclXI | CGGCCG | 1 cut(s) | 72 |
| Eco130I | CCWWGG | 3 cut(s) | 249, 1227, 1902 |
| Eco47I | GGWCC | 1 cut(s) | 1767 |
| Eco52I | CGGCCG | 1 cut(s) | 72 |
| Eco72I | CACGTG | 1 cut(s) | 93 |
| Eco81I | CCTNAGG | 1 cut(s) | 1500 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1767 |
| EcoT14I | CCWWGG | 3 cut(s) | 249, 1227, 1902 |
| EcoT22I | ATGCAT | 1 cut(s) | 1320 |
| ErhI | CCWWGG | 3 cut(s) | 249, 1227, 1902 |
| FaeI | CATG | 7 cut(s) | 347, 751, 1105, 1231, 1292, 1475, 1950 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1397, 1429 |
| FaqI | GGGAC | 5 cut(s) | 366, 1341, 1698, 1780, 1839 |
| FatI | CATG | 7 cut(s) | 343, 747, 1101, 1227, 1288, 1471, 1946 |
| FauI | CCCGC | 4 cut(s) | 41, 1375, 1757, 1927 |
| FauNDI | CATATG | 1 cut(s) | 109 |
| FbaI | TGATCA | 1 cut(s) | 868 |
| FblI | GTMKAC | 1 cut(s) | 1560 |
| Fnu4HI | GCNGC | 3 cut(s) | 75, 663, 768 |
| FokI | GGATG | 4 cut(s) | 179, 816, 1084, 1169 |
| Fsp4HI | GCNGC | 3 cut(s) | 75, 663, 768 |
| FspBI | CTAG | 4 cut(s) | 243, 429, 482, 863 |
| GluI | GCNGC | 3 cut(s) | 75, 663, 768 |
| GsaI | CCCAGC | 3 cut(s) | 81, 322, 1596 |
| HaeIII | GGCC | 7 cut(s) | 74, 117, 139, 573, 966, 1434, 1701 |
| HapII | CCGG | 3 cut(s) | 158, 1626, 1786 |
| HgaI | GACGC | 2 cut(s) | 368, 1061 |
| Hin1II | CATG | 7 cut(s) | 347, 751, 1105, 1231, 1292, 1475, 1950 |
| HincII | GTYRAC | 2 cut(s) | 1051, 1099 |
| HindII | GTYRAC | 2 cut(s) | 1051, 1099 |
| HpaII | CCGG | 3 cut(s) | 158, 1626, 1786 |
| HphI | GGTGA | 3 cut(s) | 112, 227, 1015 |
| Hpy166II | GTNNAC | 4 cut(s) | 717, 1051, 1099, 1561 |
| Hpy188I | TCNGA | 2 cut(s) | 26, 411 |
| Hpy188III | TCNNGA | 6 cut(s) | 415, 1289, 1337, 1442, 1835, 1947 |
| Hpy8I | GTNNAC | 4 cut(s) | 717, 1051, 1099, 1561 |
| HpyAV | CCTTC | 6 cut(s) | 8, 346, 399, 622, 1045, 1571 |
| HpyCH4IV | ACGT | 3 cut(s) | 58, 92, 921 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 376, 385, 662, 963, 1817 |
| HpyF3I | CTNAG | 5 cut(s) | 408, 657, 1214, 1500, 1517 |
| HpySE526I | ACGT | 3 cut(s) | 58, 92, 921 |
| Hsp92II | CATG | 7 cut(s) | 347, 751, 1105, 1231, 1292, 1475, 1950 |
| Ksp22I | TGATCA | 1 cut(s) | 868 |
| Kzo9I | GATC | 5 cut(s) | 130, 411, 868, 1223, 1915 |
| LmnI | GCTCC | 1 cut(s) | 919 |
| Lsp1109I | GCAGC | 2 cut(s) | 674, 779 |
| LweI | GCATC | 6 cut(s) | 256, 307, 794, 1410, 1820, 1855 |
| MaeI | CTAG | 4 cut(s) | 243, 429, 482, 863 |
| MaeII | ACGT | 3 cut(s) | 58, 92, 921 |
| MaeIII | GTNAC | 2 cut(s) | 925, 1160 |
| MalI | GATC | 5 cut(s) | 132, 413, 870, 1225, 1917 |
| MboI | GATC | 5 cut(s) | 130, 411, 868, 1223, 1915 |
| MfeI | CAATTG | 2 cut(s) | 125, 523 |
| MflI | RGATCY | 3 cut(s) | 411, 1223, 1915 |
| MlsI | TGGCCA | 1 cut(s) | 1434 |
| MluNI | TGGCCA | 1 cut(s) | 1434 |
| MlyI | GAGTC | 6 cut(s) | 272, 412, 484, 960, 1015, 1821 |
| MmeI | TCCRAC | 2 cut(s) | 207, 1521 |
| Mox20I | TGGCCA | 1 cut(s) | 1434 |
| Mph1103I | ATGCAT | 1 cut(s) | 1320 |
| MroXI | GAANNNNTTC | 4 cut(s) | 356, 369, 490, 884 |
| MscI | TGGCCA | 1 cut(s) | 1434 |
| MseI | TTAA | 4 cut(s) | 1233, 1260, 1680, 1890 |
| MslI | CAYNNNNRTG | 2 cut(s) | 95, 893 |
| Msp20I | TGGCCA | 1 cut(s) | 1434 |
| MspA1I | CMGCKG | 1 cut(s) | 77 |
| MspI | CCGG | 3 cut(s) | 158, 1626, 1786 |
| MspR9I | CCNGG | 2 cut(s) | 158, 1787 |
| MunI | CAATTG | 2 cut(s) | 125, 523 |
| MvnI | CGCG | 1 cut(s) | 379 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 376, 385, 662, 963, 1817 |
| NciI | CCSGG | 2 cut(s) | 158, 1787 |
| NcoI | CCATGG | 1 cut(s) | 1227 |
| NdeI | CATATG | 1 cut(s) | 109 |
| NdeII | GATC | 5 cut(s) | 130, 411, 868, 1223, 1915 |
| NlaIII | CATG | 7 cut(s) | 347, 751, 1105, 1231, 1292, 1475, 1950 |
| NlaIV | GGNNCC | 2 cut(s) | 1225, 1768 |
| NsiI | ATGCAT | 1 cut(s) | 1320 |
| NspI | RCATGY | 1 cut(s) | 347 |
| OliI | CACNNNNGTG | 1 cut(s) | 95 |
| PaeI | GCATGC | 1 cut(s) | 347 |
| PagI | TCATGA | 2 cut(s) | 1288, 1946 |
| PdmI | GAANNNNTTC | 4 cut(s) | 356, 369, 490, 884 |
| PfeI | GAWTC | 6 cut(s) | 486, 943, 1108, 1285, 1604, 1854 |
| PkrI | GCNGC | 3 cut(s) | 76, 664, 769 |
| PleI | GAGTC | 6 cut(s) | 272, 412, 483, 959, 1014, 1821 |
| PmaCI | CACGTG | 1 cut(s) | 93 |
| PmlI | CACGTG | 1 cut(s) | 93 |
| PpsI | GAGTC | 6 cut(s) | 272, 412, 483, 959, 1014, 1821 |
| Ppu21I | YACGTR | 1 cut(s) | 93 |
| PpuMI | RGGWCCY | 1 cut(s) | 1767 |
| PsiI | TTATAA | 1 cut(s) | 1353 |
| Psp1406I | AACGTT | 1 cut(s) | 921 |
| Psp5II | RGGWCCY | 1 cut(s) | 1767 |
| PspCI | CACGTG | 1 cut(s) | 93 |
| PspFI | CCCAGC | 3 cut(s) | 77, 318, 1592 |
| PspN4I | GGNNCC | 2 cut(s) | 1225, 1768 |
| PspPI | GGNCC | 4 cut(s) | 116, 138, 571, 1767 |
| PspPPI | RGGWCCY | 1 cut(s) | 1767 |
| PstI | CTGCAG | 1 cut(s) | 1864 |
| PsuI | RGATCY | 3 cut(s) | 411, 1223, 1915 |
| RseI | CAYNNNNRTG | 2 cut(s) | 95, 893 |
| SaqAI | TTAA | 4 cut(s) | 1233, 1260, 1680, 1890 |
| SatI | GCNGC | 3 cut(s) | 75, 663, 768 |
| Sau3AI | GATC | 5 cut(s) | 130, 411, 868, 1223, 1915 |
| Sau96I | GGNCC | 4 cut(s) | 116, 138, 571, 1767 |
| SchI | GAGTC | 6 cut(s) | 272, 412, 484, 960, 1015, 1821 |
| ScrFI | CCNGG | 2 cut(s) | 158, 1787 |
| SfaNI | GCATC | 6 cut(s) | 256, 307, 794, 1410, 1820, 1855 |
| SfcI | CTRYAG | 2 cut(s) | 826, 1860 |
| SinI | GGWCC | 1 cut(s) | 1767 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 95, 893 |
| SpeI | ACTAGT | 1 cut(s) | 862 |
| SphI | GCATGC | 1 cut(s) | 347 |
| SsiI | CCGC | 6 cut(s) | 48, 75, 400, 1382, 1764, 1920 |
| SspI | AATATT | 1 cut(s) | 1552 |
| SspMI | CTAG | 4 cut(s) | 243, 429, 482, 863 |
| StyD4I | CCNGG | 2 cut(s) | 156, 1785 |
| StyI | CCWWGG | 3 cut(s) | 249, 1227, 1902 |
| TaiI | ACGT | 3 cut(s) | 61, 95, 924 |
| TaqI | TCGA | 4 cut(s) | 202, 360, 840, 1814 |
| TauI | GCSGC | 1 cut(s) | 77 |
| TfiI | GAWTC | 6 cut(s) | 486, 943, 1108, 1285, 1604, 1854 |
| Tru1I | TTAA | 4 cut(s) | 1233, 1260, 1680, 1890 |
| Tru9I | TTAA | 4 cut(s) | 1233, 1260, 1680, 1890 |
| TscAI | CASTG | 5 cut(s) | 72, 228, 769, 974, 1045 |
| TseI | GCWGC | 2 cut(s) | 662, 767 |
| TspDTI | ATGAA | 8 cut(s) | 73, 183, 378, 1011, 1277, 1460, 1541, 1935 |
| TspGWI | ACGGA | 1 cut(s) | 1278 |
| TspRI | CASTG | 5 cut(s) | 72, 228, 769, 974, 1045 |
| VpaK11BI | GGWCC | 1 cut(s) | 1767 |
| XceI | RCATGY | 1 cut(s) | 347 |
| XmiI | GTMKAC | 1 cut(s) | 1560 |
| XmnI | GAANNNNTTC | 4 cut(s) | 356, 369, 490, 884 |
| XspI | CTAG | 4 cut(s) | 243, 429, 482, 863 |
| Zsp2I | ATGCAT | 1 cut(s) | 1320 |