Pentatricopeptide repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HflX_C | PF19275 | 15 - 76 | 2.9e-06 | HflX C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 311 |
| AciI | CCGC | 1 cut(s) | 161 |
| AclWI | GGATC | 2 cut(s) | 26, 166 |
| AfaI | GTAC | 2 cut(s) | 202, 270 |
| AgsI | TTSAA | 3 cut(s) | 109, 142, 182 |
| AjnI | CCWGG | 2 cut(s) | 99, 129 |
| AluBI | AGCT | 1 cut(s) | 193 |
| AluI | AGCT | 1 cut(s) | 193 |
| AlwI | GGATC | 2 cut(s) | 26, 166 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 113 |
| AsuHPI | GGTGA | 1 cut(s) | 37 |
| BciT130I | CCWGG | 2 cut(s) | 101, 131 |
| BfmI | CTRYAG | 1 cut(s) | 118 |
| Bme1390I | CCNGG | 2 cut(s) | 101, 131 |
| BmrFI | CCNGG | 2 cut(s) | 101, 131 |
| BmrI | ACTGGG | 1 cut(s) | 258 |
| BmsI | GCATC | 1 cut(s) | 51 |
| BmuI | ACTGGG | 1 cut(s) | 258 |
| BsaJI | CCNNGG | 1 cut(s) | 100 |
| Bse1I | ACTGG | 1 cut(s) | 264 |
| BseBI | CCWGG | 2 cut(s) | 101, 131 |
| BseDI | CCNNGG | 1 cut(s) | 100 |
| BseMII | CTCAG | 1 cut(s) | 83 |
| BseNI | ACTGG | 1 cut(s) | 264 |
| Bsp1407I | TGTACA | 1 cut(s) | 268 |
| Bsp143I | GATC | 2 cut(s) | 31, 171 |
| BspACI | CCGC | 1 cut(s) | 161 |
| BspCNI | CTCAG | 1 cut(s) | 84 |
| BspMAI | CTGCAG | 1 cut(s) | 122 |
| BspPI | GGATC | 2 cut(s) | 26, 166 |
| BsrGI | TGTACA | 1 cut(s) | 268 |
| BsrI | ACTGG | 1 cut(s) | 264 |
| BssECI | CCNNGG | 1 cut(s) | 100 |
| BssMI | GATC | 2 cut(s) | 31, 171 |
| Bst2UI | CCWGG | 2 cut(s) | 101, 131 |
| Bst4CI | ACNGT | 1 cut(s) | 235 |
| BstAUI | TGTACA | 1 cut(s) | 268 |
| BstDEI | CTNAG | 2 cut(s) | 92, 197 |
| BstKTI | GATC | 2 cut(s) | 34, 174 |
| BstMBI | GATC | 2 cut(s) | 31, 171 |
| BstNI | CCWGG | 2 cut(s) | 101, 131 |
| BstSCI | CCNGG | 2 cut(s) | 99, 129 |
| BstSFI | CTRYAG | 1 cut(s) | 118 |
| BtsI | GCAGTG | 1 cut(s) | 127 |
| BtsIMutI | CAGTG | 3 cut(s) | 127, 240, 271 |
| Csp6I | GTAC | 2 cut(s) | 201, 269 |
| CviAII | CATG | 2 cut(s) | 283, 300 |
| CviJI | RGCY | 4 cut(s) | 99, 105, 167, 193 |
| CviKI_1 | RGCY | 4 cut(s) | 99, 105, 167, 193 |
| CviQI | GTAC | 2 cut(s) | 201, 269 |
| DdeI | CTNAG | 2 cut(s) | 92, 197 |
| DpnI | GATC | 2 cut(s) | 33, 173 |
| DpnII | GATC | 2 cut(s) | 31, 171 |
| EciI | GGCGGA | 1 cut(s) | 176 |
| EcoRII | CCWGG | 2 cut(s) | 99, 129 |
| FaeI | CATG | 2 cut(s) | 286, 303 |
| FaiI | YATR | 8 cut(s) | 83, 152, 157, 206, 210, 284, 301, 311 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 177, 209 |
| FatI | CATG | 2 cut(s) | 282, 299 |
| Hin1II | CATG | 2 cut(s) | 286, 303 |
| HinfI | GANTC | 1 cut(s) | 146 |
| HphI | GGTGA | 1 cut(s) | 37 |
| Hpy166II | GTNNAC | 2 cut(s) | 269, 271 |
| Hpy188I | TCNGA | 2 cut(s) | 47, 93 |
| Hpy188III | TCNNGA | 1 cut(s) | 35 |
| Hpy8I | GTNNAC | 2 cut(s) | 269, 271 |
| HpyAV | CCTTC | 1 cut(s) | 136 |
| HpyCH4III | ACNGT | 1 cut(s) | 235 |
| HpyCH4V | TGCA | 4 cut(s) | 81, 120, 125, 318 |
| HpyF3I | CTNAG | 2 cut(s) | 92, 197 |
| Hsp92II | CATG | 2 cut(s) | 286, 303 |
| Kzo9I | GATC | 2 cut(s) | 31, 171 |
| LpnPI | CCDG | 6 cut(s) | 48, 86, 113, 116, 143, 277 |
| LweI | GCATC | 1 cut(s) | 51 |
| MalI | GATC | 2 cut(s) | 33, 173 |
| MboI | GATC | 2 cut(s) | 31, 171 |
| MluCI | AATT | 1 cut(s) | 137 |
| MlyI | GAGTC | 1 cut(s) | 140 |
| MmeI | TCCRAC | 1 cut(s) | 196 |
| MroXI | GAANNNNTTC | 1 cut(s) | 113 |
| MspR9I | CCNGG | 2 cut(s) | 101, 131 |
| MvaI | CCWGG | 2 cut(s) | 101, 131 |
| NdeII | GATC | 2 cut(s) | 31, 171 |
| NlaIII | CATG | 2 cut(s) | 286, 303 |
| PdmI | GAANNNNTTC | 1 cut(s) | 113 |
| PfoI | TCCNGGA | 1 cut(s) | 129 |
| PleI | GAGTC | 1 cut(s) | 140 |
| PpsI | GAGTC | 1 cut(s) | 140 |
| PsiI | TTATAA | 1 cut(s) | 311 |
| Psp6I | CCWGG | 2 cut(s) | 99, 129 |
| PspGI | CCWGG | 2 cut(s) | 99, 129 |
| PstI | CTGCAG | 1 cut(s) | 122 |
| RsaI | GTAC | 2 cut(s) | 202, 270 |
| RsaNI | GTAC | 2 cut(s) | 201, 269 |
| Sau3AI | GATC | 2 cut(s) | 31, 171 |
| SchI | GAGTC | 1 cut(s) | 140 |
| ScrFI | CCNGG | 2 cut(s) | 101, 131 |
| SetI | ASST | 4 cut(s) | 18, 27, 195, 216 |
| SfaNI | GCATC | 1 cut(s) | 51 |
| SfcI | CTRYAG | 1 cut(s) | 118 |
| Sse9I | AATT | 1 cut(s) | 137 |
| SsiI | CCGC | 1 cut(s) | 161 |
| StyD4I | CCNGG | 2 cut(s) | 99, 129 |
| TaaI | ACNGT | 1 cut(s) | 235 |
| TasI | AATT | 1 cut(s) | 137 |
| TatI | WGTACW | 1 cut(s) | 268 |
| TscAI | CASTG | 3 cut(s) | 127, 240, 271 |
| TspDTI | ATGAA | 1 cut(s) | 299 |
| TspRI | CASTG | 3 cut(s) | 127, 240, 271 |
| XmnI | GAANNNNTTC | 1 cut(s) | 113 |