Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1218, 1323 |
| AatII | GACGTC | 1 cut(s) | 471 |
| Acc36I | ACCTGC | 1 cut(s) | 548 |
| AccII | CGCG | 1 cut(s) | 244 |
| AciI | CCGC | 1 cut(s) | 1727 |
| AcoI | YGGCCR | 1 cut(s) | 1297 |
| AcsI | RAATTY | 1 cut(s) | 534 |
| AcuI | CTGAAG | 2 cut(s) | 26, 886 |
| AcyI | GRCGYC | 2 cut(s) | 210, 468 |
| AfaI | GTAC | 1 cut(s) | 1633 |
| AflIII | ACRYGT | 1 cut(s) | 1116 |
| AluBI | AGCT | 6 cut(s) | 175, 632, 845, 1195, 1457, 1580 |
| AluI | AGCT | 6 cut(s) | 175, 632, 845, 1195, 1457, 1580 |
| Alw26I | GTCTC | 1 cut(s) | 716 |
| AoxI | GGCC | 3 cut(s) | 1158, 1297, 1564 |
| ApeKI | GCWGC | 4 cut(s) | 45, 48, 527, 632 |
| ApoI | RAATTY | 1 cut(s) | 534 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 221, 234, 749, 1718 |
| AsuHPI | GGTGA | 5 cut(s) | 466, 532, 880, 889, 1166 |
| AsuII | TTCGAA | 1 cut(s) | 16 |
| AxyI | CCTNAGG | 1 cut(s) | 522 |
| BalI | TGGCCA | 1 cut(s) | 1299 |
| BanII | GRGCYC | 1 cut(s) | 1091 |
| BbsI | GAAGAC | 4 cut(s) | 14, 449, 463, 1477 |
| BbvI | GCAGC | 4 cut(s) | 57, 60, 514, 619 |
| BccI | CCATC | 6 cut(s) | 649, 707, 931, 1016, 1226, 1384 |
| BceAI | ACGGC | 2 cut(s) | 384, 511 |
| BciVI | GTATCC | 3 cut(s) | 715, 1124, 1765 |
| BcoDI | GTCTC | 1 cut(s) | 716 |
| BfaI | CTAG | 3 cut(s) | 87, 768, 1373 |
| BfmI | CTRYAG | 1 cut(s) | 1686 |
| BfuAI | ACCTGC | 1 cut(s) | 548 |
| BfuI | GTATCC | 3 cut(s) | 715, 1124, 1765 |
| BisI | GCNGC | 4 cut(s) | 46, 49, 528, 633 |
| BlsI | GCNGC | 4 cut(s) | 47, 50, 529, 634 |
| BmiI | GGNNCC | 1 cut(s) | 1090 |
| BmsI | GCATC | 5 cut(s) | 659, 1516, 1685, 1720, 1742 |
| BpiI | GAAGAC | 4 cut(s) | 14, 449, 463, 1477 |
| BpmI | CTGGAG | 2 cut(s) | 572, 765 |
| Bpu14I | TTCGAA | 1 cut(s) | 16 |
| BpuEI | CTTGAG | 1 cut(s) | 1730 |
| BsaAI | YACGTR | 1 cut(s) | 1524 |
| BsaHI | GRCGYC | 2 cut(s) | 210, 468 |
| BsaI | GGTCTC | 1 cut(s) | 716 |
| BsaJI | CCNNGG | 2 cut(s) | 1092, 1651 |
| BsaWI | WCCGGW | 1 cut(s) | 571 |
| Bse1I | ACTGG | 4 cut(s) | 28, 839, 1161, 1189 |
| Bse21I | CCTNAGG | 1 cut(s) | 522 |
| Bse3DI | GCAATG | 1 cut(s) | 40 |
| BseDI | CCNNGG | 2 cut(s) | 1092, 1651 |
| BseGI | GGATG | 5 cut(s) | 580, 674, 942, 1027, 1735 |
| BseMI | GCAATG | 1 cut(s) | 40 |
| BseMII | CTCAG | 3 cut(s) | 513, 661, 768 |
| BseNI | ACTGG | 4 cut(s) | 28, 839, 1161, 1189 |
| BseRI | GAGGAG | 1 cut(s) | 1053 |
| BseXI | GCAGC | 4 cut(s) | 57, 60, 514, 619 |
| BseYI | CCCAGC | 2 cut(s) | 171, 1457 |
| BsgI | GTGCAG | 1 cut(s) | 513 |
| Bsh1236I | CGCG | 1 cut(s) | 244 |
| BshFI | GGCC | 3 cut(s) | 1160, 1299, 1566 |
| BsiSI | CCGG | 1 cut(s) | 572 |
| BsmAI | GTCTC | 1 cut(s) | 716 |
| BsnI | GGCC | 3 cut(s) | 1160, 1299, 1566 |
| Bso31I | GGTCTC | 1 cut(s) | 716 |
| Bsp119I | TTCGAA | 1 cut(s) | 16 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1091 |
| Bsp143I | GATC | 2 cut(s) | 1069, 1149 |
| BspACI | CCGC | 1 cut(s) | 1727 |
| BspANI | GGCC | 3 cut(s) | 1160, 1299, 1566 |
| BspCNI | CTCAG | 3 cut(s) | 514, 660, 767 |
| BspFNI | CGCG | 1 cut(s) | 244 |
| BspLI | GGNNCC | 1 cut(s) | 1090 |
| BspMI | ACCTGC | 1 cut(s) | 548 |
| BspT104I | TTCGAA | 1 cut(s) | 16 |
| BspTNI | GGTCTC | 1 cut(s) | 716 |
| BsrDI | GCAATG | 1 cut(s) | 40 |
| BsrI | ACTGG | 4 cut(s) | 28, 839, 1161, 1189 |
| BssECI | CCNNGG | 2 cut(s) | 1092, 1651 |
| BssMI | GATC | 2 cut(s) | 1069, 1149 |
| BssNI | GRCGYC | 2 cut(s) | 210, 468 |
| BssT1I | CCWWGG | 1 cut(s) | 1092 |
| Bst4CI | ACNGT | 6 cut(s) | 710, 878, 1010, 1031, 1136, 1210 |
| Bst6I | CTCTTC | 1 cut(s) | 755 |
| BstACI | GRCGYC | 2 cut(s) | 210, 468 |
| BstBAI | YACGTR | 1 cut(s) | 1524 |
| BstBI | TTCGAA | 1 cut(s) | 16 |
| BstC8I | GCNNGC | 1 cut(s) | 674 |
| BstDEI | CTNAG | 4 cut(s) | 522, 647, 754, 1382 |
| BstF5I | GGATG | 5 cut(s) | 580, 674, 942, 1027, 1735 |
| BstFNI | CGCG | 1 cut(s) | 244 |
| BstKTI | GATC | 2 cut(s) | 1072, 1152 |
| BstMAI | GTCTC | 1 cut(s) | 716 |
| BstMBI | GATC | 2 cut(s) | 1069, 1149 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 54, 241, 250, 1682 |
| BstNSI | RCATGY | 2 cut(s) | 1120, 1288 |
| BstSFI | CTRYAG | 1 cut(s) | 1686 |
| BstUI | CGCG | 1 cut(s) | 244 |
| BstV1I | GCAGC | 4 cut(s) | 57, 60, 514, 619 |
| BstV2I | GAAGAC | 4 cut(s) | 14, 449, 463, 1477 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 550, 958, 1524 |
| Bsu36I | CCTNAGG | 1 cut(s) | 522 |
| BsuI | GTATCC | 3 cut(s) | 715, 1124, 1765 |
| BsuRI | GGCC | 3 cut(s) | 1160, 1299, 1566 |
| BtsCI | GGATG | 5 cut(s) | 580, 674, 942, 1027, 1735 |
| BtsIMutI | CAGTG | 2 cut(s) | 832, 910 |
| BveI | ACCTGC | 1 cut(s) | 548 |
| Cac8I | GCNNGC | 1 cut(s) | 674 |
| CseI | GACGC | 3 cut(s) | 218, 233, 335 |
| Csp6I | GTAC | 1 cut(s) | 1632 |
| CviAII | CATG | 5 cut(s) | 613, 967, 1117, 1285, 1797 |
| CviQI | GTAC | 1 cut(s) | 1632 |
| DdeI | CTNAG | 4 cut(s) | 522, 647, 754, 1382 |
| DpnI | GATC | 2 cut(s) | 1071, 1151 |
| DpnII | GATC | 2 cut(s) | 1069, 1149 |
| EaeI | YGGCCR | 1 cut(s) | 1297 |
| Eam1104I | CTCTTC | 1 cut(s) | 755 |
| EarI | CTCTTC | 1 cut(s) | 755 |
| Eco130I | CCWWGG | 1 cut(s) | 1092 |
| Eco147I | AGGCCT | 1 cut(s) | 1566 |
| Eco24I | GRGCYC | 1 cut(s) | 1091 |
| Eco31I | GGTCTC | 1 cut(s) | 716 |
| Eco57I | CTGAAG | 2 cut(s) | 26, 886 |
| Eco81I | CCTNAGG | 1 cut(s) | 522 |
| EcoT14I | CCWWGG | 1 cut(s) | 1092 |
| EcoT22I | ATGCAT | 1 cut(s) | 1735 |
| EcoT38I | GRGCYC | 1 cut(s) | 1091 |
| ErhI | CCWWGG | 1 cut(s) | 1092 |
| FaeI | CATG | 5 cut(s) | 616, 970, 1120, 1288, 1800 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1076, 1108, 1692, 1724 |
| FatI | CATG | 5 cut(s) | 612, 966, 1116, 1284, 1796 |
| Fnu4HI | GCNGC | 4 cut(s) | 46, 49, 528, 633 |
| FokI | GGATG | 5 cut(s) | 587, 681, 949, 1034, 1742 |
| FriOI | GRGCYC | 1 cut(s) | 1091 |
| Fsp4HI | GCNGC | 4 cut(s) | 46, 49, 528, 633 |
| FspBI | CTAG | 3 cut(s) | 87, 768, 1373 |
| GluI | GCNGC | 4 cut(s) | 46, 49, 528, 633 |
| GsaI | CCCAGC | 2 cut(s) | 175, 1461 |
| GsuI | CTGGAG | 2 cut(s) | 572, 765 |
| HaeIII | GGCC | 3 cut(s) | 1160, 1299, 1566 |
| HapII | CCGG | 1 cut(s) | 572 |
| HgaI | GACGC | 3 cut(s) | 218, 233, 335 |
| Hin1I | GRCGYC | 2 cut(s) | 210, 468 |
| Hin1II | CATG | 5 cut(s) | 616, 970, 1120, 1288, 1800 |
| HincII | GTYRAC | 2 cut(s) | 112, 964 |
| HindII | GTYRAC | 2 cut(s) | 112, 964 |
| HinfI | GANTC | 8 cut(s) | 13, 186, 283, 406, 808, 973, 1469, 1543 |
| HpaII | CCGG | 1 cut(s) | 572 |
| HphI | GGTGA | 5 cut(s) | 466, 532, 880, 889, 1166 |
| Hpy166II | GTNNAC | 5 cut(s) | 112, 964, 1426, 1527, 1593 |
| Hpy188I | TCNGA | 4 cut(s) | 757, 1282, 1652, 1817 |
| Hpy188III | TCNNGA | 9 cut(s) | 162, 280, 359, 649, 782, 887, 1175, 1202, 1700 |
| Hpy8I | GTNNAC | 5 cut(s) | 112, 964, 1426, 1527, 1593 |
| Hpy99I | CGWCG | 1 cut(s) | 351 |
| HpyAV | CCTTC | 9 cut(s) | 211, 264, 487, 910, 926, 1388, 1436, 1597, 1708 |
| HpyCH4III | ACNGT | 6 cut(s) | 710, 878, 1010, 1031, 1136, 1210 |
| HpyCH4IV | ACGT | 4 cut(s) | 468, 786, 1523, 1529 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 54, 241, 250, 1682 |
| HpyF3I | CTNAG | 4 cut(s) | 522, 647, 754, 1382 |
| HpySE526I | ACGT | 4 cut(s) | 468, 786, 1523, 1529 |
| Hsp92I | GRCGYC | 2 cut(s) | 210, 468 |
| Hsp92II | CATG | 5 cut(s) | 616, 970, 1120, 1288, 1800 |
| Kzo9I | GATC | 2 cut(s) | 1069, 1149 |
| LmnI | GCTCC | 3 cut(s) | 784, 1094, 1192 |
| Lsp1109I | GCAGC | 4 cut(s) | 57, 60, 514, 619 |
| LweI | GCATC | 5 cut(s) | 659, 1516, 1685, 1720, 1742 |
| MaeI | CTAG | 3 cut(s) | 87, 768, 1373 |
| MaeII | ACGT | 4 cut(s) | 468, 786, 1523, 1529 |
| MaeIII | GTNAC | 9 cut(s) | 580, 790, 830, 872, 895, 1025, 1112, 1210, 1346 |
| MalI | GATC | 2 cut(s) | 1071, 1151 |
| MboI | GATC | 2 cut(s) | 1069, 1149 |
| MhlI | GDGCHC | 1 cut(s) | 1091 |
| MlsI | TGGCCA | 1 cut(s) | 1299 |
| MluNI | TGGCCA | 1 cut(s) | 1299 |
| MlyI | GAGTC | 2 cut(s) | 180, 277 |
| MmeI | TCCRAC | 1 cut(s) | 1386 |
| Mox20I | TGGCCA | 1 cut(s) | 1299 |
| Mph1103I | ATGCAT | 1 cut(s) | 1735 |
| MroXI | GAANNNNTTC | 4 cut(s) | 221, 234, 749, 1718 |
| MscI | TGGCCA | 1 cut(s) | 1299 |
| MseI | TTAA | 7 cut(s) | 375, 600, 945, 1098, 1335, 1571, 1803 |
| MslI | CAYNNNNRTG | 1 cut(s) | 545 |
| Msp20I | TGGCCA | 1 cut(s) | 1299 |
| MspI | CCGG | 1 cut(s) | 572 |
| MvnI | CGCG | 1 cut(s) | 244 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 54, 241, 250, 1682 |
| NdeII | GATC | 2 cut(s) | 1069, 1149 |
| NlaIII | CATG | 5 cut(s) | 616, 970, 1120, 1288, 1800 |
| NlaIV | GGNNCC | 1 cut(s) | 1090 |
| NmuCI | GTSAC | 2 cut(s) | 830, 895 |
| NsiI | ATGCAT | 1 cut(s) | 1735 |
| NspI | RCATGY | 2 cut(s) | 1120, 1288 |
| NspV | TTCGAA | 1 cut(s) | 16 |
| PceI | AGGCCT | 1 cut(s) | 1566 |
| PciI | ACATGT | 1 cut(s) | 1116 |
| PdmI | GAANNNNTTC | 4 cut(s) | 221, 234, 749, 1718 |
| PfeI | GAWTC | 6 cut(s) | 13, 406, 808, 973, 1469, 1543 |
| PkrI | GCNGC | 4 cut(s) | 47, 50, 529, 634 |
| PleI | GAGTC | 2 cut(s) | 180, 277 |
| PpsI | GAGTC | 2 cut(s) | 180, 277 |
| Ppu21I | YACGTR | 1 cut(s) | 1524 |
| PscI | ACATGT | 1 cut(s) | 1116 |
| PsiI | TTATAA | 2 cut(s) | 1218, 1323 |
| PspFI | CCCAGC | 2 cut(s) | 171, 1457 |
| PspN4I | GGNNCC | 1 cut(s) | 1090 |
| RsaI | GTAC | 1 cut(s) | 1633 |
| RsaNI | GTAC | 1 cut(s) | 1632 |
| RseI | CAYNNNNRTG | 1 cut(s) | 545 |
| SaqAI | TTAA | 7 cut(s) | 375, 600, 945, 1098, 1335, 1571, 1803 |
| SatI | GCNGC | 4 cut(s) | 46, 49, 528, 633 |
| Sau3AI | GATC | 2 cut(s) | 1069, 1149 |
| SchI | GAGTC | 2 cut(s) | 180, 277 |
| SduI | GDGCHC | 1 cut(s) | 1091 |
| SfaNI | GCATC | 5 cut(s) | 659, 1516, 1685, 1720, 1742 |
| SfcI | CTRYAG | 1 cut(s) | 1686 |
| SfuI | TTCGAA | 1 cut(s) | 16 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 545 |
| SmlI | CTYRAG | 1 cut(s) | 1709 |
| SmoI | CTYRAG | 1 cut(s) | 1709 |
| SseBI | AGGCCT | 1 cut(s) | 1566 |
| SsiI | CCGC | 1 cut(s) | 1727 |
| SspI | AATATT | 2 cut(s) | 1327, 1417 |
| SspMI | CTAG | 3 cut(s) | 87, 768, 1373 |
| StuI | AGGCCT | 1 cut(s) | 1566 |
| StyI | CCWWGG | 1 cut(s) | 1092 |
| TaaI | ACNGT | 6 cut(s) | 710, 878, 1010, 1031, 1136, 1210 |
| TaiI | ACGT | 4 cut(s) | 471, 789, 1526, 1532 |
| TaqI | TCGA | 4 cut(s) | 16, 184, 225, 349 |
| TfiI | GAWTC | 6 cut(s) | 13, 406, 808, 973, 1469, 1543 |
| Tru1I | TTAA | 7 cut(s) | 375, 600, 945, 1098, 1335, 1571, 1803 |
| Tru9I | TTAA | 7 cut(s) | 375, 600, 945, 1098, 1335, 1571, 1803 |
| TscAI | CASTG | 2 cut(s) | 839, 910 |
| TseFI | GTSAC | 2 cut(s) | 830, 895 |
| TseI | GCWGC | 4 cut(s) | 45, 48, 527, 632 |
| Tsp45I | GTSAC | 2 cut(s) | 830, 895 |
| TspDTI | ATGAA | 6 cut(s) | 122, 243, 750, 876, 1616, 1676 |
| TspGWI | ACGGA | 1 cut(s) | 1143 |
| TspRI | CASTG | 2 cut(s) | 839, 910 |
| XapI | RAATTY | 1 cut(s) | 534 |
| XceI | RCATGY | 2 cut(s) | 1120, 1288 |
| XmnI | GAANNNNTTC | 4 cut(s) | 221, 234, 749, 1718 |
| XspI | CTAG | 3 cut(s) | 87, 768, 1373 |
| ZraI | GACGTC | 1 cut(s) | 469 |
| Zsp2I | ATGCAT | 1 cut(s) | 1735 |