FvH4_3g42600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000021
Physical Location & Seq
Reverse (-)
35592008 .. 35593724
1717 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g42600.t1

Sequence Viewer

Length: 996 bp
ATGATTCACCAAACTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGGAACGCCTAAAATCGCGAGAGTAAAATCTAAGAAAAATACCTTCAAGTCTTCAACGATAGATCGGCCTTATGACGATGAAGACGAATCAATGATGATATGGGGGACGCTCATAGGAACTGTAGATAGACTGAGATTTGAGAAGAGAGAGGAGGAAGATCGTGCGTGGGAGTCGTCTTTTGGCAGAGTAGAGAGACGATATTGGGTGCTTGGTGAACGTGATTTGGGTTTTACAAGTTTGATTTTCTATCCGTTTGATCAGTTCAGTAAAGGTCTGATGGCTGAGATGGTTTCGTCCCTTTCTGTCCCGTTAATTGCGTCCCGCAGGTTATATTATGTTTATTATATCAAATTTGAAATGAAGGGCTCTATGGTCATTGTTCGTAGTTGTAATATATTGATAAACGGATATTACAAGAGTAGAAATGTCGATCGGGCTTATAAGGTTTTCAAGAGAATGAATTGTTGGGAGCTGGTTCCTGACACCGTCACCTATACCACTCTTATTGACGGTTTTTACAAAGCAGGGAGGATACAAGAGGCAGAAAAGTTGTTATCTGAGATGCAAGTTTGTGGCCAACTTCTAAATGTTCAAACTTACGTTGTTATACTTGATGGCTTATGTAACAACCAACAACTTTCTACGGCACTGGAACTGCTTAGAGAGATTGAAGGCAAGAAGTTGGAACTAAATATTATAACTTACAATATAATCATTGAAGGTTTGTGCAAAGATGGGAAAATGGATTCTGCAAGGCATGTCTTCTCTGGTTTGTCATCAAAGCATATTCAACCTGATGTTCGGACATATACCATAATGATCAGTGGACTTTGTGAAGGTGGCCTTTTAAGTGAAGCTGAAAAGTTGTTGACAAAAATGGAGGAGAAAGGCTGTTCTCCAGATGGTTGTACCCATGCCCCGTGTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

332

Amino Acids

38.24

Weight (kDa)

5.01

Isoelectric Point (pI)

58.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 151 - 196 2.2e-14 PPR repeat family
PPR_1 PF12854 179 - 211 5.2e-12 PPR repeat
PPR_2 PF13041 182 - 231 8.5e-16 PPR repeat family
TPR_24 PF23276 182 - 277 9.4e-07 Fungal tetratrico peptide repeats
PPR PF01535 185 - 214 1.9e-08 PPR repeat
PPR_3 PF13812 205 - 262 1.3e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 221 - 266 3.1e-10 PPR repeat family
PPR_1 PF12854 250 - 277 1.9e-09 PPR repeat
PPR_2 PF13041 253 - 300 5.8e-17 PPR repeat family
PPR_3 PF13812 279 - 326 4.9e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 284 - 316 5.3e-12 PPR repeat
PPR PF01535 291 - 320 2.4e-08 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000021)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12700 AT1G12700 AT1G12700 AT1G62680 AT1G62680 AT1G62720 AT1G63230 AT1G63630 AT1G63630 AT1G64583 AT1G64583 AT3G16710 AT3G16710 AT5G16640 AT5G41170 AT5G41170
fragaria_vesca FvH4_2g40320 FvH4_3g13950 FvH4_3g31580 FvH4_3g31590 FvH4_3g33650 FvH4_3g33650 FvH4_3g33650 FvH4_3g35200 FvH4_3g36280 FvH4_3g37111 FvH4_3g37480 FvH4_3g37481 FvH4_3g38020 FvH4_3g38070 FvH4_3g38471 FvH4_3g38472 FvH4_3g38590 FvH4_3g38590 FvH4_3g38590 FvH4_3g38931 FvH4_3g38940 FvH4_3g38940 FvH4_3g39650 FvH4_3g39890 FvH4_3g39940 FvH4_3g40100 FvH4_3g40130 FvH4_3g40940 FvH4_3g40940 FvH4_3g40940 FvH4_3g41340 FvH4_3g41820 FvH4_3g42120 FvH4_3g42121 FvH4_3g42430 FvH4_3g42600 FvH4_3g42700 FvH4_3g43150 FvH4_3g43170 FvH4_3g43330 FvH4_3g44300 FvH4_4g22270 FvH4_4g22280 FvH4_5g09470 FvH4_6g52550
malus_domestica MD03G1099700.v1.1 MD03G1101000.v1.1 MD03G1103400.v1.1 MD03G1103500.v1.1 MD03G1103700.v1.1 MD03G1105300.v1.1 MD03G1106000.v1.1 MD03G1106100.v1.1 MD03G1107100.v1.1 MD03G1108100.v1.1 MD03G1113100.v1.1 MD03G1113300.v1.1 MD03G1113400.v1.1 MD03G1113500.v1.1 MD03G1113600.v1.1 MD03G1113700.v1.1 MD03G1113800.v1.1 MD04G1015600.v1.1 MD11G1115600.v1.1 MD11G1117400.v1.1 MD11G1117500.v1.1 MD11G1122400.v1.1 MD11G1126400.v1.1 MD11G1126500.v1.1 MD11G1128300.v1.1 MD11G1128400.v1.1 MD11G1128600.v1.1 MD11G1128700.v1.1 MD11G1131800.v1.1 MD11G1131900.v1.1 MD11G1132200.v1.1 MD11G1132300.v1.1 MD11G1135500.v1.1
prunus_persica Prupe.3G114600_v2.0.a1 Prupe.3G114700_v2.0.a1 Prupe.3G138000_v2.0.a1 Prupe.6G080500_v2.0.a1 Prupe.6G081600_v2.0.a1 Prupe.6G086000_v2.0.a1 Prupe.6G087400_v2.0.a1 Prupe.6G087400_v2.0.a1 Prupe.6G087400_v2.0.a1 Prupe.6G087400_v2.0.a1 Prupe.6G087600_v2.0.a1 Prupe.6G088600_v2.0.a1 Prupe.6G088600_v2.0.a1 Prupe.6G088600_v2.0.a1 Prupe.6G088600_v2.0.a1 Prupe.6G090500_v2.0.a1 Prupe.6G090600_v2.0.a1 Prupe.6G091000_v2.0.a1 Prupe.6G091400_v2.0.a1 Prupe.6G091500_v2.0.a1 Prupe.6G093300_v2.0.a1 Prupe.6G094000_v2.0.a1 Prupe.6G094000_v2.0.a1 Prupe.6G094000_v2.0.a1 Prupe.6G094000_v2.0.a1 Prupe.6G106300_v2.0.a1 Prupe.6G117200_v2.0.a1 Prupe.6G117400_v2.0.a1 Prupe.6G195600_v2.0.a1 Prupe.6G195700_v2.0.a1 Prupe.8G027800_v2.0.a1 Prupe.8G078200_v2.0.a1 Prupe.8G078200_v2.0.a1
pyrus_communis pycom03g08210 pycom03g08430 pycom03g08450 pycom03g08500 pycom03g08510 pycom03g08640 pycom03g08650 pycom03g08660 pycom04g01160 pycom11g09860 pycom11g10660 pycom11g10700 pycom11g10730 pycom11g10740 pycom11g10890 pycom11g10900 pycom11g10910 pycom11g11040 pycom11g11070 pycom11g11080 pycom11g11090 pycom11g11110 pycom11g11130 pycom11g11140 pycom11g11240
rosa_chinensis RchiOBHm_Chr2g0133531 RchiOBHm_Chr4g0407671 RchiOBHm_Chr5g0027691 RchiOBHm_Chr5g0027731 RchiOBHm_Chr5g0031841 RchiOBHm_Chr5g0041821 RchiOBHm_Chr5g0061091 RchiOBHm_Chr5g0061131 RchiOBHm_Chr5g0061141 RchiOBHm_Chr5g0062111 RchiOBHm_Chr5g0062121 RchiOBHm_Chr5g0062141 RchiOBHm_Chr5g0062151 RchiOBHm_Chr5g0062161 RchiOBHm_Chr5g0062301 RchiOBHm_Chr5g0062311 RchiOBHm_Chr5g0065171 RchiOBHm_Chr5g0066121 RchiOBHm_Chr5g0066211 RchiOBHm_Chr5g0069221 RchiOBHm_Chr5g0069231 RchiOBHm_Chr5g0069241 RchiOBHm_Chr5g0069251 RchiOBHm_Chr5g0069261 RchiOBHm_Chr5g0069321 RchiOBHm_Chr5g0069341 RchiOBHm_Chr5g0069351 RchiOBHm_Chr5g0069571 RchiOBHm_Chr5g0069581 RchiOBHm_Chr5g0069591 RchiOBHm_Chr5g0069601 RchiOBHm_Chr5g0069651 RchiOBHm_Chr5g0070751 RchiOBHm_Chr5g0071481 RchiOBHm_Chr5g0071931 RchiOBHm_Chr5g0071941 RchiOBHm_Chr5g0072771 RchiOBHm_Chr5g0072831 RchiOBHm_Chr5g0072861 RchiOBHm_Chr5g0072871 RchiOBHm_Chr5g0072901 RchiOBHm_Chr5g0072921 RchiOBHm_Chr5g0073691 RchiOBHm_Chr5g0073711 RchiOBHm_Chr5g0073761 RchiOBHm_Chr5g0074141 RchiOBHm_Chr5g0074181 RchiOBHm_Chr5g0074191 RchiOBHm_Chr5g0074201 RchiOBHm_Chr5g0074231 RchiOBHm_Chr5g0074941 RchiOBHm_Chr5g0074951 RchiOBHm_Chr5g0074961 RchiOBHm_Chr5g0074981 RchiOBHm_Chr5g0075791 RchiOBHm_Chr5g0076111 RchiOBHm_Chr5g0076121 RchiOBHm_Chr5g0076231 RchiOBHm_Chr5g0076241 RchiOBHm_Chr5g0076251 RchiOBHm_Chr5g0076261 RchiOBHm_Chr5g0077441 RchiOBHm_Chr5g0077451 RchiOBHm_Chr5g0077481 RchiOBHm_Chr5g0077511 RchiOBHm_Chr5g0077521 RchiOBHm_Chr5g0077541 RchiOBHm_Chr5g0078461 RchiOBHm_Chr5g0078471 RchiOBHm_Chr5g0078541 RchiOBHm_Chr5g0078551 RchiOBHm_Chr5g0078591 RchiOBHm_Chr5g0078611 RchiOBHm_Chr5g0078801 RchiOBHm_Chr5g0078811 RchiOBHm_Chr7g0226411 RchiOBHm_Chr7g0226421
rosa_laevigata RLG00000001731 RLG00000001921 RLG00000007507 RLG00000008174 RLG00000008512 RLG00000029432 RLG00000033036 RLG00000033038 RLG00000034096 RLG00000035428 RLG00000035433 RLG00000035434 RLG00000035435 RLG00000035535 RLG00000035536 RLG00000035548 RLG00000035751 RLG00000035754 RLG00000035764 RLG00000035882 RLG00000036044 RLG00000036048 RLG00000036060 RLG00000036061 RLG00000036062 RLG00000036063 RLG00000036070 RLG00000036078 RLG00000036079 RLG00000036080 RLG00000036156 RLG00000036218 RLG00000036219 RLG00000036263 RLG00000036264 RLG00000036331 RLG00000036332 RLG00000036333 RLG00000036338 RLG00000036339 RLG00000036344 RLG00000036345 RLG00000036347 RLG00000036348 RLG00000036349 RLG00000036405 RLG00000036416 RLG00000036457 RLG00000036459 RLG00000036515 RLG00000036516 RLG00000036517 RLG00000036646 RLG00000036697 RLG00000036698 RLG00000036699 RLG00000036702 RLG00000036774 RLG00000036775 RLG00000036786 RLG00000036787
rosa_multiflora Rmu_co8164206.1_g000001 Rmu_co8198940.1_g000001 Rmu_co8222088.1_g000001 Rmu_co8267751.1_g000001 Rmu_co8339831.1_g000001 Rmu_sc0000573.1_g000056 Rmu_sc0000573.1_g000057 Rmu_sc0000848.1_g000018 Rmu_sc0000861.1_g000039 Rmu_sc0000956.1_g000006 Rmu_sc0000956.1_g000007 Rmu_sc0000987.1_g000004 Rmu_sc0001264.1_g000011 Rmu_sc0001264.1_g000023 Rmu_sc0001366.1_g000024 Rmu_sc0001366.1_g000034 Rmu_sc0001647.1_g000023 Rmu_sc0001647.1_g000025 Rmu_sc0002101.1_g000008 Rmu_sc0002149.1_g000019 Rmu_sc0002296.1_g000015 Rmu_sc0002296.1_g000018 Rmu_sc0002627.1_g000002 Rmu_sc0002658.1_g000002 Rmu_sc0002658.1_g000004 Rmu_sc0002658.1_g000005 Rmu_sc0002658.1_g000008 Rmu_sc0003160.1_g000001 Rmu_sc0003160.1_g000002 Rmu_sc0003160.1_g000027 Rmu_sc0003264.1_g000007 Rmu_sc0003323.1_g000018 Rmu_sc0003542.1_g000014 Rmu_sc0003945.1_g000018 Rmu_sc0004140.1_g000044 Rmu_sc0004140.1_g000045 Rmu_sc0004277.1_g000049 Rmu_sc0004277.1_g000050 Rmu_sc0004277.1_g000051 Rmu_sc0004277.1_g000056 Rmu_sc0004277.1_g000059 Rmu_sc0004277.1_g000064 Rmu_sc0004277.1_g000065 Rmu_sc0004277.1_g000066 Rmu_sc0004277.1_g000071 Rmu_sc0004277.1_g000073 Rmu_sc0004277.1_g000074 Rmu_sc0004277.1_g000080 Rmu_sc0004277.1_g000081 Rmu_sc0004277.1_g000082 Rmu_sc0004501.1_g000006 Rmu_sc0004501.1_g000008 Rmu_sc0004501.1_g000009 Rmu_sc0005069.1_g000010 Rmu_sc0005069.1_g000013 Rmu_sc0005069.1_g000028 Rmu_sc0005255.1_g000008 Rmu_sc0005255.1_g000009 Rmu_sc0005860.1_g000003 Rmu_sc0005961.1_g000008 Rmu_sc0005961.1_g000009 Rmu_sc0006031.1_g000026 Rmu_sc0006952.1_g000035 Rmu_sc0006984.1_g000001 Rmu_sc0007385.1_g000011 Rmu_sc0007385.1_g000018 Rmu_sc0007385.1_g000019 Rmu_sc0007385.1_g000025 Rmu_sc0009248.1_g000008 Rmu_sc0009248.1_g000016 Rmu_sc0009685.1_g000001 Rmu_sc0009685.1_g000008 Rmu_sc0009911.1_g000004 Rmu_sc0009988.1_g000002 Rmu_sc0013565.1_g000003 Rmu_sc0013615.1_g000005 Rmu_sc0015509.1_g000001 Rmu_sc0016676.1_g000001 Rmu_sc0019146.1_g000001 Rmu_sc0023658.1_g000001 Rmu_sc0026875.1_g000001 Rmu_sc0032705.1_g000003 Rmu_sc0036016.1_g000001 Rmu_sc0038790.1_g000001 Rmu_sc0038790.1_g000002 Rmu_sc0038790.1_g000003 Rmu_sc0041070.1_g000001 Rmu_sc0041071.1_g000001
rosa_roxburghii Rroxscaffold_1G00004470 Rroxscaffold_1G00005600 Rroxscaffold_1G00006630 Rroxscaffold_1G00006640 Rroxscaffold_1G00006680 Rroxscaffold_1G00007240 Rroxscaffold_1G00007270 Rroxscaffold_1G00007600 Rroxscaffold_1G00008320 Rroxscaffold_1G00008330 Rroxscaffold_1G00008390 Rroxscaffold_1G00008400 Rroxscaffold_1G00009250 Rroxscaffold_1G00009640 Rroxscaffold_1G00010430 Rroxscaffold_1G00011430 Rroxscaffold_1G00011580 Rroxscaffold_1G00014270 Rroxscaffold_1G00017730 Rroxscaffold_1G00018390 Rroxscaffold_1G00018400 Rroxscaffold_1G00018410 Rroxscaffold_1G00018550 Rroxscaffold_1G00018580 Rroxscaffold_1G00018590 Rroxscaffold_1G00019560 Rroxscaffold_1G00038700 Rroxscaffold_1G00038710 Rroxscaffold_1G00051880 Rroxscaffold_2G00122050 Rroxscaffold_2G00122060 Rroxscaffold_2G00122070 Rroxscaffold_3G00232850 Rroxscaffold_3G00233170 Rroxscaffold_3G00235240 Rroxscaffold_3G00236030 Rroxscaffold_4G00316710 Rroxscaffold_5G00352260 Rroxscaffold_5G00354420 Rroxscaffold_5G00358050 Rroxscaffold_5G00366080 Rroxscaffold_5G00384640 Rroxscaffold_6G00394470
rosa_rugosa Rorug02G0236100 Rorug02G0312600 Rorug02G0312600 Rorug04G0081200 Rorug04G0099500 Rorug04G0125700 Rorug04G0192800 Rorug04G0192800 Rorug05G0100300 Rorug05G0195500 Rorug05G0337500 Rorug05G0338000 Rorug05G0338100 Rorug05G0338200 Rorug05G0346000 Rorug05G0346100 Rorug05G0346300 Rorug05G0346400 Rorug05G0347500 Rorug05G0347500 Rorug05G0347700 Rorug05G0347800 Rorug05G0376600 Rorug05G0376600 Rorug05G0379000 Rorug05G0396800 Rorug05G0397000 Rorug05G0397000 Rorug05G0397000 Rorug05G0397200 Rorug05G0398400 Rorug05G0398500 Rorug05G0399000 Rorug05G0412600 Rorug05G0412700 Rorug05G0415700 Rorug05G0419800 Rorug05G0419900 Rorug05G0420000 Rorug05G0420100 Rorug05G0420200 Rorug05G0420500 Rorug05G0429200 Rorug05G0429300 Rorug05G0429400 Rorug05G0429600 Rorug05G0429600 Rorug05G0442200 Rorug05G0446100 Rorug05G0446100 Rorug05G0446100 Rorug05G0446100 Rorug05G0446100 Rorug05G0446200 Rorug05G0446200 Rorug05G0446300 Rorug05G0455000 Rorug05G0455000 Rorug05G0455200 Rorug05G0455400 Rorug05G0461000 Rorug06G0021200 Rorug07G0220800 Rorug07G0237100
rosa_samantha Rh4DG139600 Rh7AG368500 Rh7DG382400
rosa_wichuraiana Rw0G005990 Rw0G015820 Rw0G023090 Rw1G011560 Rw5G026460 Rw5G037630 Rw5G040110 Rw5G042370 Rw5G042480 Rw5G042500 Rw5G042520 Rw5G043540 Rw5G043840 Rw5G044270 Rw5G044280 Rw5G044310 Rw5G044320 Rw5G044940 Rw5G045650 Rw5G045660 Rw5G045670 Rw5G046760 Rw5G047270 Rw5G047280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 507, 764
Acc36I ACCTGC 1 cut(s) 381
AccII CGCG 1 cut(s) 83
AciI CCGC 1 cut(s) 388
AcoI YGGCCR 1 cut(s) 640
AcsI RAATTY 1 cut(s) 416
AcuI CTGAAG 1 cut(s) 36
AfaI GTAC 1 cut(s) 976
AgsI TTSAA 8 cut(s) 112, 120, 422, 517, 659, 737, 785, 857
AjuI GAANNNNNNNTTGG 2 cut(s) 514, 546
AluBI AGCT 2 cut(s) 538, 923
AluI AGCT 2 cut(s) 538, 923
Alw26I GTCTC 1 cut(s) 253
AoxI GGCC 3 cut(s) 131, 640, 907
ApoI RAATTY 1 cut(s) 416
AsuHPI GGTGA 2 cut(s) 290, 547
BalI TGGCCA 1 cut(s) 642
BanII GRGCYC 1 cut(s) 434
BbsI GAAGAC 3 cut(s) 108, 153, 820
BccI CCATC 5 cut(s) 337, 346, 674, 794, 962
BceAI ACGGC 1 cut(s) 726
BciVI GTATCC 1 cut(s) 591
BclI TGATCA 2 cut(s) 322, 885
BcoDI GTCTC 1 cut(s) 253
BfmI CTRYAG 1 cut(s) 186
BfuAI ACCTGC 1 cut(s) 381
BfuI GTATCC 1 cut(s) 591
BmiI GGNNCC 1 cut(s) 543
BmsI GCATC 1 cut(s) 618
BpiI GAAGAC 3 cut(s) 108, 153, 820
BpmI CTGGAG 1 cut(s) 948
Bse1I ACTGG 1 cut(s) 720
BseMII CTCAG 3 cut(s) 188, 339, 615
BseNI ACTGG 1 cut(s) 720
BseRI GAGGAG 2 cut(s) 230, 962
Bsh1236I CGCG 1 cut(s) 83
Bsh1285I CGRYCG 1 cut(s) 499
BshFI GGCC 3 cut(s) 133, 642, 909
BsiEI CGRYCG 1 cut(s) 499
BslFI GGGAC 4 cut(s) 184, 346, 356, 370
BsmAI GTCTC 1 cut(s) 253
BsmBI CGTCTC 1 cut(s) 253
BsmFI GGGAC 4 cut(s) 184, 346, 356, 370
BsnI GGCC 3 cut(s) 133, 642, 909
Bsp1286I GDGCHC 1 cut(s) 434
Bsp143I GATC 5 cut(s) 127, 223, 322, 496, 885
Bsp68I TCGCGA 1 cut(s) 83
BspACI CCGC 1 cut(s) 388
BspANI GGCC 3 cut(s) 133, 642, 909
BspCNI CTCAG 3 cut(s) 189, 340, 616
BspFNI CGCG 1 cut(s) 83
BspLI GGNNCC 1 cut(s) 543
BspMI ACCTGC 1 cut(s) 381
BsrI ACTGG 1 cut(s) 720
BssMI GATC 5 cut(s) 127, 223, 322, 496, 885
Bst4CI ACNGT 3 cut(s) 187, 553, 578
Bst6I CTCTTC 1 cut(s) 203
BstDEI CTNAG 5 cut(s) 96, 197, 348, 624, 725
BstFNI CGCG 1 cut(s) 83
BstKTI GATC 5 cut(s) 130, 226, 325, 499, 888
BstMAI GTCTC 1 cut(s) 253
BstMBI GATC 5 cut(s) 127, 223, 322, 496, 885
BstMCI CGRYCG 1 cut(s) 499
BstNSI RCATGY 1 cut(s) 827
BstSFI CTRYAG 1 cut(s) 186
BstUI CGCG 1 cut(s) 83
BstV2I GAAGAC 3 cut(s) 108, 153, 820
BsuI GTATCC 1 cut(s) 591
BsuRI GGCC 3 cut(s) 133, 642, 909
BtsIMutI CAGTG 2 cut(s) 713, 895
BtuMI TCGCGA 1 cut(s) 83
BveI ACCTGC 1 cut(s) 381
CseI GACGC 2 cut(s) 181, 372
Csp6I GTAC 1 cut(s) 975
CspCI CAANNNNNGTGG 2 cut(s) 553, 588
CviAII CATG 2 cut(s) 824, 980
CviQI GTAC 1 cut(s) 975
DdeI CTNAG 5 cut(s) 96, 197, 348, 624, 725
DpnI GATC 5 cut(s) 129, 225, 324, 498, 887
DpnII GATC 5 cut(s) 127, 223, 322, 496, 885
EaeI YGGCCR 1 cut(s) 640
Eam1104I CTCTTC 1 cut(s) 203
EarI CTCTTC 1 cut(s) 203
Eco24I GRGCYC 1 cut(s) 434
Eco57I CTGAAG 1 cut(s) 36
EcoT38I GRGCYC 1 cut(s) 434
Esp3I CGTCTC 1 cut(s) 253
FaeI CATG 2 cut(s) 827, 983
FalI AAGNNNNNCTT 2 cut(s) 894, 926
FaqI GGGAC 4 cut(s) 184, 346, 356, 370
FatI CATG 2 cut(s) 823, 979
FauI CCCGC 1 cut(s) 395
FbaI TGATCA 2 cut(s) 322, 885
FriOI GRGCYC 1 cut(s) 434
GsuI CTGGAG 1 cut(s) 948
HaeIII GGCC 3 cut(s) 133, 642, 909
HgaI GACGC 2 cut(s) 181, 372
Hin1II CATG 2 cut(s) 827, 983
HincII GTYRAC 1 cut(s) 936
HindII GTYRAC 1 cut(s) 936
HinfI GANTC 4 cut(s) 4, 152, 236, 812
HphI GGTGA 2 cut(s) 290, 547
Hpy166II GTNNAC 3 cut(s) 281, 893, 936
Hpy188I TCNGA 3 cut(s) 342, 625, 870
Hpy188III TCNNGA 4 cut(s) 82, 517, 545, 965
Hpy8I GTNNAC 3 cut(s) 281, 893, 936
HpyAV CCTTC 5 cut(s) 118, 421, 731, 779, 896
HpyCH4III ACNGT 3 cut(s) 187, 553, 578
HpyCH4IV ACGT 2 cut(s) 283, 666
HpyCH4V TGCA 3 cut(s) 631, 795, 818
HpyF3I CTNAG 5 cut(s) 96, 197, 348, 624, 725
HpySE526I ACGT 2 cut(s) 283, 666
Hsp92II CATG 2 cut(s) 827, 983
Ksp22I TGATCA 2 cut(s) 322, 885
Kzo9I GATC 5 cut(s) 127, 223, 322, 496, 885
LmnI GCTCC 1 cut(s) 535
LpnPI CCDG 8 cut(s) 376, 524, 558, 576, 701, 819, 873, 978
LweI GCATC 1 cut(s) 618
MaeII ACGT 2 cut(s) 283, 666
MaeIII GTNAC 2 cut(s) 553, 689
MalI GATC 5 cut(s) 129, 225, 324, 498, 887
MboI GATC 5 cut(s) 127, 223, 322, 496, 885
MhlI GDGCHC 1 cut(s) 434
MlsI TGGCCA 1 cut(s) 642
MluCI AATT 4 cut(s) 378, 416, 526, 991
MluNI TGGCCA 1 cut(s) 642
MlyI GAGTC 1 cut(s) 245
MmeI TCCRAC 1 cut(s) 729
MnlI CCTC 6 cut(s) 59, 208, 211, 588, 598, 940
Mox20I TGGCCA 1 cut(s) 642
MscI TGGCCA 1 cut(s) 642
MseI TTAA 3 cut(s) 377, 914, 994
Msp20I TGGCCA 1 cut(s) 642
MvnI CGCG 1 cut(s) 83
NdeII GATC 5 cut(s) 127, 223, 322, 496, 885
NlaIII CATG 2 cut(s) 827, 983
NlaIV GGNNCC 1 cut(s) 543
NmuCI GTSAC 1 cut(s) 553
NruI TCGCGA 1 cut(s) 83
NspI RCATGY 1 cut(s) 827
PcsI WCGNNNNNNNCGW 1 cut(s) 147
PfeI GAWTC 3 cut(s) 4, 152, 812
PflFI GACNNNGTC 1 cut(s) 551
Ple19I CGATCG 1 cut(s) 499
PleI GAGTC 1 cut(s) 244
PpsI GAGTC 1 cut(s) 244
PsiI TTATAA 2 cut(s) 507, 764
PspN4I GGNNCC 1 cut(s) 543
PsyI GACNNNGTC 1 cut(s) 551
PvuI CGATCG 1 cut(s) 499
RruI TCGCGA 1 cut(s) 83
RsaI GTAC 1 cut(s) 976
RsaNI GTAC 1 cut(s) 975
SaqAI TTAA 3 cut(s) 377, 914, 994
Sau3AI GATC 5 cut(s) 127, 223, 322, 496, 885
SchI GAGTC 1 cut(s) 245
SduI GDGCHC 1 cut(s) 434
SfaNI GCATC 1 cut(s) 618
SfcI CTRYAG 1 cut(s) 186
Sse9I AATT 4 cut(s) 378, 416, 526, 991
SsiI CCGC 1 cut(s) 388
SspI AATATT 1 cut(s) 760
TaaI ACNGT 3 cut(s) 187, 553, 578
TaiI ACGT 2 cut(s) 286, 669
TaqI TCGA 1 cut(s) 495
TasI AATT 4 cut(s) 378, 416, 526, 991
TfiI GAWTC 3 cut(s) 4, 152, 812
Tru1I TTAA 3 cut(s) 377, 914, 994
Tru9I TTAA 3 cut(s) 377, 914, 994
TscAI CASTG 2 cut(s) 720, 895
TseFI GTSAC 1 cut(s) 553
Tsp45I GTSAC 1 cut(s) 553
TspDTI ATGAA 3 cut(s) 159, 440, 539
TspGWI ACGGA 2 cut(s) 306, 486
TspRI CASTG 2 cut(s) 720, 895
Tth111I GACNNNGTC 1 cut(s) 551
XapI RAATTY 1 cut(s) 416
XceI RCATGY 1 cut(s) 827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.