Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1409 |
| AatII | GACGTC | 1 cut(s) | 1148 |
| AccB1I | GGYRCC | 4 cut(s) | 764, 1000, 1294, 1820 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1694, 1817 |
| AccBSI | CCGCTC | 1 cut(s) | 455 |
| AccI | GTMKAC | 1 cut(s) | 77 |
| AccII | CGCG | 8 cut(s) | 543, 614, 635, 644, 698, 824, 1202, 1349 |
| AclWI | GGATC | 6 cut(s) | 2, 296, 360, 649, 839, 1123 |
| AcoI | YGGCCR | 2 cut(s) | 1161, 1185 |
| AcsI | RAATTY | 1 cut(s) | 1204 |
| AcvI | CACGTG | 2 cut(s) | 35, 1134 |
| AcyI | GRCGYC | 5 cut(s) | 326, 684, 765, 1001, 1145 |
| AfaI | GTAC | 4 cut(s) | 926, 971, 1310, 1804 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 608, 909, 1327, 1575, 1694, 1817, 1929, 1930 |
| AflIII | ACRYGT | 2 cut(s) | 34, 696 |
| AgsI | TTSAA | 4 cut(s) | 99, 207, 466, 1216 |
| AjnI | CCWGG | 3 cut(s) | 1529, 1559, 1631 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1488, 1520 |
| Alw21I | GWGCWC | 4 cut(s) | 283, 290, 801, 1798 |
| Alw26I | GTCTC | 2 cut(s) | 235, 1024 |
| AlwI | GGATC | 6 cut(s) | 2, 296, 360, 649, 839, 1123 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 709, 754 |
| Ama87I | CYCGRG | 3 cut(s) | 516, 885, 908 |
| AoxI | GGCC | 8 cut(s) | 42, 558, 825, 904, 990, 1161, 1185, 1858 |
| ApoI | RAATTY | 1 cut(s) | 1204 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 70, 102 |
| AspLEI | GCGC | 6 cut(s) | 614, 767, 1003, 1202, 1351, 1904 |
| AspS9I | GGNCC | 7 cut(s) | 43, 175, 437, 1098, 1242, 1385, 1828 |
| AsuC2I | CCSGG | 3 cut(s) | 41, 435, 1272 |
| AsuHPI | GGTGA | 7 cut(s) | 7, 14, 331, 679, 1066, 1162, 1342 |
| AvaI | CYCGRG | 3 cut(s) | 516, 885, 908 |
| AvaII | GGWCC | 6 cut(s) | 175, 437, 1098, 1242, 1385, 1828 |
| BaeGI | GKGCMC | 1 cut(s) | 1272 |
| BanI | GGYRCC | 4 cut(s) | 764, 1000, 1294, 1820 |
| BanII | GRGCYC | 3 cut(s) | 283, 290, 424 |
| BauI | CACGAG | 1 cut(s) | 1026 |
| BbrPI | CACGTG | 2 cut(s) | 35, 1134 |
| BbsI | GAAGAC | 2 cut(s) | 812, 1885 |
| Bbv12I | GWGCWC | 4 cut(s) | 283, 290, 801, 1798 |
| BccI | CCATC | 2 cut(s) | 647, 737 |
| BceAI | ACGGC | 4 cut(s) | 118, 263, 752, 1309 |
| BciT130I | CCWGG | 3 cut(s) | 1531, 1561, 1633 |
| BcnI | CCSGG | 3 cut(s) | 41, 435, 1272 |
| BcoDI | GTCTC | 2 cut(s) | 235, 1024 |
| BfaI | CTAG | 1 cut(s) | 1791 |
| BfmI | CTRYAG | 1 cut(s) | 1647 |
| BfoI | RGCGCY | 3 cut(s) | 768, 1004, 1905 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 998, 1184 |
| BlpI | GCTNAGC | 1 cut(s) | 1543 |
| Bme1390I | CCNGG | 6 cut(s) | 41, 435, 1272, 1531, 1561, 1633 |
| Bme18I | GGWCC | 6 cut(s) | 175, 437, 1098, 1242, 1385, 1828 |
| BmeT110I | CYCGRG | 3 cut(s) | 516, 885, 908 |
| BmgT120I | GGNCC | 7 cut(s) | 43, 175, 437, 1098, 1242, 1385, 1828 |
| BmiI | GGNNCC | 8 cut(s) | 580, 766, 1002, 1099, 1296, 1386, 1387, 1822 |
| BmrFI | CCNGG | 6 cut(s) | 41, 435, 1272, 1531, 1561, 1633 |
| BmrI | ACTGGG | 2 cut(s) | 399, 1918 |
| BmsI | GCATC | 2 cut(s) | 1116, 1462 |
| BmuI | ACTGGG | 2 cut(s) | 399, 1918 |
| BpiI | GAAGAC | 2 cut(s) | 812, 1885 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 642, 674 |
| BpmI | CTGGAG | 1 cut(s) | 1394 |
| Bpu10I | CCTNAGC | 2 cut(s) | 476, 1254 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1543 |
| BpuEI | CTTGAG | 1 cut(s) | 1801 |
| BpuMI | CCSGG | 3 cut(s) | 41, 435, 1272 |
| BsaAI | YACGTR | 2 cut(s) | 35, 1134 |
| BsaHI | GRCGYC | 5 cut(s) | 326, 684, 765, 1001, 1145 |
| BsaJI | CCNNGG | 9 cut(s) | 541, 602, 822, 854, 886, 907, 1179, 1560, 1824 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 780, 810 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 608, 909, 1327, 1575, 1694, 1817, 1929, 1930 |
| Bse118I | RCCGGY | 4 cut(s) | 569, 680, 902, 1003 |
| Bse1I | ACTGG | 5 cut(s) | 405, 928, 1522, 1740, 1924 |
| Bse3DI | GCAATG | 4 cut(s) | 486, 1090, 1590, 1602 |
| BseBI | CCWGG | 3 cut(s) | 1531, 1561, 1633 |
| BseDI | CCNNGG | 9 cut(s) | 541, 602, 822, 854, 886, 907, 1179, 1560, 1824 |
| BseGI | GGATG | 1 cut(s) | 1477 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 608, 909, 1327, 1575, 1694, 1817, 1929, 1930 |
| BseMI | GCAATG | 4 cut(s) | 486, 1090, 1590, 1602 |
| BseMII | CTCAG | 5 cut(s) | 266, 296, 376, 761, 1539 |
| BseNI | ACTGG | 5 cut(s) | 405, 928, 1522, 1740, 1924 |
| BseSI | GKGCMC | 1 cut(s) | 1272 |
| BseYI | CCCAGC | 2 cut(s) | 137, 1601 |
| BsgI | GTGCAG | 1 cut(s) | 1569 |
| Bsh1236I | CGCG | 8 cut(s) | 543, 614, 635, 644, 698, 824, 1202, 1349 |
| BshFI | GGCC | 8 cut(s) | 44, 560, 827, 906, 992, 1163, 1187, 1860 |
| BshNI | GGYRCC | 4 cut(s) | 764, 1000, 1294, 1820 |
| BsiHKAI | GWGCWC | 4 cut(s) | 283, 290, 801, 1798 |
| BsiHKCI | CYCGRG | 3 cut(s) | 516, 885, 908 |
| BsiSI | CCGG | 9 cut(s) | 41, 435, 570, 590, 681, 903, 1004, 1032, 1272 |
| BslFI | GGGAC | 6 cut(s) | 23, 393, 1045, 1111, 1371, 1577 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 608, 909, 1327, 1575, 1694, 1817, 1929, 1930 |
| BsmAI | GTCTC | 2 cut(s) | 235, 1024 |
| BsmBI | CGTCTC | 1 cut(s) | 1024 |
| BsmFI | GGGAC | 6 cut(s) | 23, 393, 1045, 1111, 1371, 1577 |
| BsmI | GAATGC | 3 cut(s) | 1698, 1775, 1835 |
| BsnI | GGCC | 8 cut(s) | 44, 560, 827, 906, 992, 1163, 1187, 1860 |
| BsoBI | CYCGRG | 3 cut(s) | 516, 885, 908 |
| Bsp1286I | GDGCHC | 6 cut(s) | 283, 290, 424, 801, 1272, 1798 |
| Bsp143I | GATC | 7 cut(s) | 7, 301, 365, 630, 654, 844, 1115 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1543 |
| Bsp19I | CCATGG | 3 cut(s) | 602, 1179, 1824 |
| Bsp68I | TCGCGA | 1 cut(s) | 644 |
| BspANI | GGCC | 8 cut(s) | 44, 560, 827, 906, 992, 1163, 1187, 1860 |
| BspCNI | CTCAG | 5 cut(s) | 267, 295, 375, 760, 1540 |
| BspFNI | CGCG | 8 cut(s) | 543, 614, 635, 644, 698, 824, 1202, 1349 |
| BspLI | GGNNCC | 8 cut(s) | 580, 766, 1002, 1099, 1296, 1386, 1387, 1822 |
| BspPI | GGATC | 6 cut(s) | 2, 296, 360, 649, 839, 1123 |
| BspQI | GCTCTTC | 1 cut(s) | 1328 |
| BspT107I | GGYRCC | 4 cut(s) | 764, 1000, 1294, 1820 |
| BsrBI | CCGCTC | 1 cut(s) | 455 |
| BsrDI | GCAATG | 4 cut(s) | 486, 1090, 1590, 1602 |
| BsrFI | RCCGGY | 4 cut(s) | 569, 680, 902, 1003 |
| BsrI | ACTGG | 5 cut(s) | 405, 928, 1522, 1740, 1924 |
| BssAI | RCCGGY | 4 cut(s) | 569, 680, 902, 1003 |
| BssECI | CCNNGG | 9 cut(s) | 541, 602, 822, 854, 886, 907, 1179, 1560, 1824 |
| BssMI | GATC | 7 cut(s) | 7, 301, 365, 630, 654, 844, 1115 |
| BssNI | GRCGYC | 5 cut(s) | 326, 684, 765, 1001, 1145 |
| BssSI | CACGAG | 1 cut(s) | 1026 |
| BssT1I | CCWWGG | 3 cut(s) | 602, 1179, 1824 |
| Bst2BI | CACGAG | 1 cut(s) | 1026 |
| Bst2UI | CCWGG | 3 cut(s) | 1531, 1561, 1633 |
| Bst4CI | ACNGT | 6 cut(s) | 175, 229, 553, 974, 1435, 1648 |
| Bst6I | CTCTTC | 1 cut(s) | 1328 |
| BstACI | GRCGYC | 5 cut(s) | 326, 684, 765, 1001, 1145 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1592 |
| BstBAI | YACGTR | 2 cut(s) | 35, 1134 |
| BstC8I | GCNNGC | 9 cut(s) | 333, 571, 682, 1005, 1075, 1417, 1689, 1906, 1920 |
| BstDEI | CTNAG | 9 cut(s) | 275, 282, 362, 443, 476, 747, 1254, 1543, 1548 |
| BstDSI | CCRYGG | 6 cut(s) | 541, 602, 822, 854, 1179, 1824 |
| BstF5I | GGATG | 1 cut(s) | 1477 |
| BstFNI | CGCG | 8 cut(s) | 543, 614, 635, 644, 698, 824, 1202, 1349 |
| BstH2I | RGCGCY | 3 cut(s) | 768, 1004, 1905 |
| BstHHI | GCGC | 6 cut(s) | 614, 767, 1003, 1202, 1351, 1904 |
| BstKTI | GATC | 7 cut(s) | 10, 304, 368, 633, 657, 847, 1118 |
| BstMAI | GTCTC | 2 cut(s) | 235, 1024 |
| BstMBI | GATC | 7 cut(s) | 7, 301, 365, 630, 654, 844, 1115 |
| BstNI | CCWGG | 3 cut(s) | 1531, 1561, 1633 |
| BstNSI | RCATGY | 1 cut(s) | 263 |
| BstSCI | CCNGG | 6 cut(s) | 39, 433, 1270, 1529, 1559, 1631 |
| BstSFI | CTRYAG | 1 cut(s) | 1647 |
| BstSLI | GKGCMC | 1 cut(s) | 1272 |
| BstUI | CGCG | 8 cut(s) | 543, 614, 635, 644, 698, 824, 1202, 1349 |
| BstV2I | GAAGAC | 2 cut(s) | 812, 1885 |
| BstX2I | RGATCY | 3 cut(s) | 7, 301, 365 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1852 |
| BstYI | RGATCY | 3 cut(s) | 7, 301, 365 |
| BsuRI | GGCC | 8 cut(s) | 44, 560, 827, 906, 992, 1163, 1187, 1860 |
| BtgI | CCRYGG | 6 cut(s) | 541, 602, 822, 854, 1179, 1824 |
| BtgZI | GCGATG | 4 cut(s) | 625, 632, 847, 1778 |
| BtsCI | GGATG | 1 cut(s) | 1477 |
| BtsIMutI | CAGTG | 3 cut(s) | 1283, 1747, 1931 |
| BtuMI | TCGCGA | 1 cut(s) | 644 |
| Cac8I | GCNNGC | 9 cut(s) | 333, 571, 682, 1005, 1075, 1417, 1689, 1906, 1920 |
| CaiI | CAGNNNCTG | 2 cut(s) | 709, 754 |
| CfoI | GCGC | 6 cut(s) | 614, 767, 1003, 1202, 1351, 1904 |
| Cfr10I | RCCGGY | 4 cut(s) | 569, 680, 902, 1003 |
| Cfr13I | GGNCC | 7 cut(s) | 43, 175, 437, 1098, 1242, 1385, 1828 |
| Cfr42I | CCGCGG | 2 cut(s) | 544, 825 |
| CseI | GACGC | 6 cut(s) | 315, 624, 673, 817, 1057, 1355 |
| Csp6I | GTAC | 4 cut(s) | 925, 970, 1309, 1803 |
| CviAII | CATG | 8 cut(s) | 260, 603, 1165, 1180, 1390, 1575, 1825, 1852 |
| CviQI | GTAC | 4 cut(s) | 925, 970, 1309, 1803 |
| DdeI | CTNAG | 9 cut(s) | 275, 282, 362, 443, 476, 747, 1254, 1543, 1548 |
| DinI | GGCGCC | 2 cut(s) | 766, 1002 |
| DpnI | GATC | 7 cut(s) | 9, 303, 367, 632, 656, 846, 1117 |
| DpnII | GATC | 7 cut(s) | 7, 301, 365, 630, 654, 844, 1115 |
| EaeI | YGGCCR | 2 cut(s) | 1161, 1185 |
| Eam1104I | CTCTTC | 1 cut(s) | 1328 |
| EarI | CTCTTC | 1 cut(s) | 1328 |
| EciI | GGCGGA | 3 cut(s) | 280, 823, 1680 |
| Ecl136II | GAGCTC | 2 cut(s) | 281, 288 |
| Eco130I | CCWWGG | 3 cut(s) | 602, 1179, 1824 |
| Eco147I | AGGCCT | 1 cut(s) | 992 |
| Eco24I | GRGCYC | 3 cut(s) | 283, 290, 424 |
| Eco47I | GGWCC | 6 cut(s) | 175, 437, 1098, 1242, 1385, 1828 |
| Eco53kI | GAGCTC | 2 cut(s) | 281, 288 |
| Eco72I | CACGTG | 2 cut(s) | 35, 1134 |
| Eco88I | CYCGRG | 3 cut(s) | 516, 885, 908 |
| EcoICRI | GAGCTC | 2 cut(s) | 281, 288 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1385 |
| EcoRII | CCWGG | 3 cut(s) | 1529, 1559, 1631 |
| EcoT14I | CCWWGG | 3 cut(s) | 602, 1179, 1824 |
| EcoT38I | GRGCYC | 3 cut(s) | 283, 290, 424 |
| EgeI | GGCGCC | 2 cut(s) | 766, 1002 |
| EheI | GGCGCC | 2 cut(s) | 766, 1002 |
| ErhI | CCWWGG | 3 cut(s) | 602, 1179, 1824 |
| Esp3I | CGTCTC | 1 cut(s) | 1024 |
| FaeI | CATG | 8 cut(s) | 263, 606, 1168, 1183, 1393, 1578, 1828, 1855 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1526, 1558 |
| FaqI | GGGAC | 6 cut(s) | 23, 393, 1045, 1111, 1371, 1577 |
| FatI | CATG | 8 cut(s) | 259, 602, 1164, 1179, 1389, 1574, 1824, 1851 |
| FauI | CCCGC | 2 cut(s) | 36, 1329 |
| FblI | GTMKAC | 1 cut(s) | 77 |
| FokI | GGATG | 1 cut(s) | 1484 |
| FriOI | GRGCYC | 3 cut(s) | 283, 290, 424 |
| FspBI | CTAG | 1 cut(s) | 1791 |
| GlaI | GCGC | 6 cut(s) | 613, 766, 1002, 1201, 1350, 1903 |
| GsaI | CCCAGC | 2 cut(s) | 141, 1605 |
| GsuI | CTGGAG | 1 cut(s) | 1394 |
| HaeII | RGCGCY | 3 cut(s) | 768, 1004, 1905 |
| HaeIII | GGCC | 8 cut(s) | 44, 560, 827, 906, 992, 1163, 1187, 1860 |
| HapII | CCGG | 9 cut(s) | 41, 435, 570, 590, 681, 903, 1004, 1032, 1272 |
| HgaI | GACGC | 6 cut(s) | 315, 624, 673, 817, 1057, 1355 |
| HhaI | GCGC | 6 cut(s) | 614, 767, 1003, 1202, 1351, 1904 |
| Hin1I | GRCGYC | 5 cut(s) | 326, 684, 765, 1001, 1145 |
| Hin1II | CATG | 8 cut(s) | 263, 606, 1168, 1183, 1393, 1578, 1828, 1855 |
| Hin6I | GCGC | 6 cut(s) | 612, 765, 1001, 1200, 1349, 1902 |
| HinP1I | GCGC | 6 cut(s) | 612, 765, 1001, 1200, 1349, 1902 |
| HincII | GTYRAC | 1 cut(s) | 78 |
| HindII | GTYRAC | 1 cut(s) | 78 |
| HpaII | CCGG | 9 cut(s) | 41, 435, 570, 590, 681, 903, 1004, 1032, 1272 |
| HphI | GGTGA | 7 cut(s) | 7, 14, 331, 679, 1066, 1162, 1342 |
| Hpy166II | GTNNAC | 4 cut(s) | 78, 178, 1242, 1770 |
| Hpy188III | TCNNGA | 8 cut(s) | 369, 382, 516, 643, 802, 898, 910, 1780 |
| Hpy8I | GTNNAC | 4 cut(s) | 78, 178, 1242, 1770 |
| HpyCH4III | ACNGT | 6 cut(s) | 175, 229, 553, 974, 1435, 1648 |
| HpyCH4IV | ACGT | 5 cut(s) | 34, 48, 84, 1133, 1145 |
| HpyCH4V | TGCA | 7 cut(s) | 4, 146, 1361, 1475, 1586, 1595, 1835 |
| HpyF3I | CTNAG | 9 cut(s) | 275, 282, 362, 443, 476, 747, 1254, 1543, 1548 |
| HpySE526I | ACGT | 5 cut(s) | 34, 48, 84, 1133, 1145 |
| Hsp92I | GRCGYC | 5 cut(s) | 326, 684, 765, 1001, 1145 |
| Hsp92II | CATG | 8 cut(s) | 263, 606, 1168, 1183, 1393, 1578, 1828, 1855 |
| HspAI | GCGC | 6 cut(s) | 612, 765, 1001, 1200, 1349, 1902 |
| KasI | GGCGCC | 2 cut(s) | 764, 1000 |
| KflI | GGGWCCC | 1 cut(s) | 1385 |
| KroI | GCCGGC | 3 cut(s) | 569, 680, 1003 |
| KroNI | GCCGGC | 3 cut(s) | 571, 682, 1005 |
| KspI | CCGCGG | 2 cut(s) | 544, 825 |
| Kzo9I | GATC | 7 cut(s) | 7, 301, 365, 630, 654, 844, 1115 |
| LguI | GCTCTTC | 1 cut(s) | 1328 |
| LmnI | GCTCC | 5 cut(s) | 293, 532, 788, 1745, 1891 |
| LweI | GCATC | 2 cut(s) | 1116, 1462 |
| MaeI | CTAG | 1 cut(s) | 1791 |
| MaeII | ACGT | 5 cut(s) | 34, 48, 84, 1133, 1145 |
| MaeIII | GTNAC | 5 cut(s) | 243, 685, 1477, 1513, 1525 |
| MalI | GATC | 7 cut(s) | 9, 303, 367, 632, 656, 846, 1117 |
| MbiI | CCGCTC | 1 cut(s) | 455 |
| MboI | GATC | 7 cut(s) | 7, 301, 365, 630, 654, 844, 1115 |
| MboII | GAAGA | 6 cut(s) | 817, 868, 871, 1345, 1700, 1885 |
| MflI | RGATCY | 3 cut(s) | 7, 301, 365 |
| MhlI | GDGCHC | 6 cut(s) | 283, 290, 424, 801, 1272, 1798 |
| MluCI | AATT | 6 cut(s) | 153, 207, 213, 918, 1109, 1204 |
| MluI | ACGCGT | 1 cut(s) | 696 |
| Mly113I | GGCGCC | 2 cut(s) | 765, 1001 |
| MlyI | GAGTC | 6 cut(s) | 408, 518, 667, 777, 1559, 1858 |
| MmeI | TCCRAC | 3 cut(s) | 194, 715, 1963 |
| MreI | CGCCGGCG | 2 cut(s) | 569, 1003 |
| MroNI | GCCGGC | 3 cut(s) | 569, 680, 1003 |
| MseI | TTAA | 4 cut(s) | 212, 1172, 1208, 1224 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1595 |
| MspA1I | CMGCKG | 5 cut(s) | 543, 794, 824, 1051, 1484 |
| MspI | CCGG | 9 cut(s) | 41, 435, 570, 590, 681, 903, 1004, 1032, 1272 |
| MspR9I | CCNGG | 6 cut(s) | 41, 435, 1272, 1531, 1561, 1633 |
| Mva1269I | GAATGC | 3 cut(s) | 1698, 1775, 1835 |
| MvaI | CCWGG | 3 cut(s) | 1531, 1561, 1633 |
| MvnI | CGCG | 8 cut(s) | 543, 614, 635, 644, 698, 824, 1202, 1349 |
| NaeI | GCCGGC | 3 cut(s) | 571, 682, 1005 |
| NarI | GGCGCC | 2 cut(s) | 765, 1001 |
| NciI | CCSGG | 3 cut(s) | 41, 435, 1272 |
| NcoI | CCATGG | 3 cut(s) | 602, 1179, 1824 |
| NdeII | GATC | 7 cut(s) | 7, 301, 365, 630, 654, 844, 1115 |
| NgoMIV | GCCGGC | 3 cut(s) | 569, 680, 1003 |
| NlaIII | CATG | 8 cut(s) | 263, 606, 1168, 1183, 1393, 1578, 1828, 1855 |
| NlaIV | GGNNCC | 8 cut(s) | 580, 766, 1002, 1099, 1296, 1386, 1387, 1822 |
| NmeAIII | GCCGAG | 3 cut(s) | 438, 532, 741 |
| NmuCI | GTSAC | 3 cut(s) | 243, 685, 1513 |
| NruI | TCGCGA | 1 cut(s) | 644 |
| NspI | RCATGY | 1 cut(s) | 263 |
| PceI | AGGCCT | 1 cut(s) | 992 |
| PciSI | GCTCTTC | 1 cut(s) | 1328 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 86, 729, 1154 |
| PctI | GAATGC | 3 cut(s) | 1698, 1775, 1835 |
| PdiI | GCCGGC | 3 cut(s) | 571, 682, 1005 |
| PfeI | GAWTC | 6 cut(s) | 166, 738, 850, 913, 1009, 1941 |
| PflFI | GACNNNGTC | 1 cut(s) | 435 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1694, 1817 |
| PleI | GAGTC | 6 cut(s) | 408, 517, 667, 777, 1558, 1858 |
| PluTI | GGCGCC | 2 cut(s) | 768, 1004 |
| PmaCI | CACGTG | 2 cut(s) | 35, 1134 |
| PmlI | CACGTG | 2 cut(s) | 35, 1134 |
| PpsI | GAGTC | 6 cut(s) | 408, 517, 667, 777, 1558, 1858 |
| Ppu21I | YACGTR | 2 cut(s) | 35, 1134 |
| PpuMI | RGGWCCY | 1 cut(s) | 1385 |
| PsiI | TTATAA | 1 cut(s) | 1409 |
| Psp124BI | GAGCTC | 2 cut(s) | 283, 290 |
| Psp5II | RGGWCCY | 1 cut(s) | 1385 |
| Psp6I | CCWGG | 3 cut(s) | 1529, 1559, 1631 |
| PspCI | CACGTG | 2 cut(s) | 35, 1134 |
| PspFI | CCCAGC | 2 cut(s) | 137, 1601 |
| PspGI | CCWGG | 3 cut(s) | 1529, 1559, 1631 |
| PspN4I | GGNNCC | 8 cut(s) | 580, 766, 1002, 1099, 1296, 1386, 1387, 1822 |
| PspPI | GGNCC | 7 cut(s) | 43, 175, 437, 1098, 1242, 1385, 1828 |
| PspPPI | RGGWCCY | 1 cut(s) | 1385 |
| PstNI | CAGNNNCTG | 2 cut(s) | 709, 754 |
| PsuI | RGATCY | 3 cut(s) | 7, 301, 365 |
| PsyI | GACNNNGTC | 1 cut(s) | 435 |
| PvuII | CAGCTG | 1 cut(s) | 1484 |
| RruI | TCGCGA | 1 cut(s) | 644 |
| RsaI | GTAC | 4 cut(s) | 926, 971, 1310, 1804 |
| RsaNI | GTAC | 4 cut(s) | 925, 970, 1309, 1803 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1595 |
| SacI | GAGCTC | 2 cut(s) | 283, 290 |
| SacII | CCGCGG | 2 cut(s) | 544, 825 |
| SalI | GTCGAC | 1 cut(s) | 76 |
| SapI | GCTCTTC | 1 cut(s) | 1328 |
| SaqAI | TTAA | 4 cut(s) | 212, 1172, 1208, 1224 |
| Sau3AI | GATC | 7 cut(s) | 7, 301, 365, 630, 654, 844, 1115 |
| Sau96I | GGNCC | 7 cut(s) | 43, 175, 437, 1098, 1242, 1385, 1828 |
| SchI | GAGTC | 6 cut(s) | 408, 518, 667, 777, 1559, 1858 |
| ScrFI | CCNGG | 6 cut(s) | 41, 435, 1272, 1531, 1561, 1633 |
| SduI | GDGCHC | 6 cut(s) | 283, 290, 424, 801, 1272, 1798 |
| SfaNI | GCATC | 2 cut(s) | 1116, 1462 |
| SfcI | CTRYAG | 1 cut(s) | 1647 |
| SfoI | GGCGCC | 2 cut(s) | 766, 1002 |
| Sfr303I | CCGCGG | 2 cut(s) | 544, 825 |
| SgrAI | CRCCGGYG | 2 cut(s) | 569, 1003 |
| SgrBI | CCGCGG | 2 cut(s) | 544, 825 |
| SgrDI | CGTCGACG | 1 cut(s) | 76 |
| SinI | GGWCC | 6 cut(s) | 175, 437, 1098, 1242, 1385, 1828 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1595 |
| SmlI | CTYRAG | 1 cut(s) | 1780 |
| SmoI | CTYRAG | 1 cut(s) | 1780 |
| Sse9I | AATT | 6 cut(s) | 153, 207, 213, 918, 1109, 1204 |
| SseBI | AGGCCT | 1 cut(s) | 992 |
| SspDI | GGCGCC | 2 cut(s) | 764, 1000 |
| SspI | AATATT | 1 cut(s) | 1963 |
| SspMI | CTAG | 1 cut(s) | 1791 |
| SstI | GAGCTC | 2 cut(s) | 283, 290 |
| StuI | AGGCCT | 1 cut(s) | 992 |
| StyD4I | CCNGG | 6 cut(s) | 39, 433, 1270, 1529, 1559, 1631 |
| StyI | CCWWGG | 3 cut(s) | 602, 1179, 1824 |
| TaaI | ACNGT | 6 cut(s) | 175, 229, 553, 974, 1435, 1648 |
| TaiI | ACGT | 5 cut(s) | 37, 51, 87, 1136, 1148 |
| TaqI | TCGA | 4 cut(s) | 77, 89, 164, 916 |
| TaqII | GACCGA | 3 cut(s) | 227, 1115, 1259 |
| TasI | AATT | 6 cut(s) | 153, 207, 213, 918, 1109, 1204 |
| TfiI | GAWTC | 6 cut(s) | 166, 738, 850, 913, 1009, 1941 |
| Tru1I | TTAA | 4 cut(s) | 212, 1172, 1208, 1224 |
| Tru9I | TTAA | 4 cut(s) | 212, 1172, 1208, 1224 |
| TscAI | CASTG | 3 cut(s) | 1290, 1747, 1931 |
| TseFI | GTSAC | 3 cut(s) | 243, 685, 1513 |
| Tsp45I | GTSAC | 3 cut(s) | 243, 685, 1513 |
| TspDTI | ATGAA | 3 cut(s) | 635, 883, 1993 |
| TspGWI | ACGGA | 6 cut(s) | 95, 150, 843, 1006, 1182, 1942 |
| TspRI | CASTG | 3 cut(s) | 1290, 1747, 1931 |
| Tth111I | GACNNNGTC | 1 cut(s) | 435 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1694, 1817 |
| VpaK11BI | GGWCC | 6 cut(s) | 175, 437, 1098, 1242, 1385, 1828 |
| XapI | RAATTY | 1 cut(s) | 1204 |
| XceI | RCATGY | 1 cut(s) | 263 |
| XmiI | GTMKAC | 1 cut(s) | 77 |
| XspI | CTAG | 1 cut(s) | 1791 |
| ZraI | GACGTC | 1 cut(s) | 1146 |