RchiOBHm_Chr5g0072861

Belongs to the peptidase M16 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000021
Physical Location & Seq
Reverse (-)
78959628 .. 78963932
4305 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34778

Sequence Viewer

Length: 2421 bp
ATGCTTTTTTCTCTCTCCGTCAACAATTTCATCATGGCTTTGTTTCATTCGAGACAAACCCATGTAGAGAGAAAACCAGCCTCAAAGCCCAAAGTTGAGGAGGATGCCTTGAAGTTGTTCCGTGAAATGCTTCACAGCCGTCCCCTGCCTTGTGTTGTTCGTTTCACTCAGTTATTGGGTCAACTTGTCAAATTGAAACACTATTCTGCCGTCATCTCTTTGAATAGACAGATGCTTCTCTCTGGAATCGCTTCTGATGACTATACTCTAAACATTATCATTAAGTGCTATTGCCATTTGAATCAAATGGGGTTTGGCTTATCTGTCTTGGGAACATTCTTCAAATTGGGTCTTCAACCAGACGTCGTCACCTTCACCACTCTAATCAACGGCTTTGTTCTCCACAATCAAGTGCCTGAGGCTGCACGAATTTTCACCAAAATGCTGGAGACAGGTCATTGTAAGCCCAATGTGGTTACGTTCAACACGCTAATGAAGGGCTTTTGCATGAGGGGAGACAACACTGCTGCAATTCAATTACTTGGGAAGATGGAAGAAGAAAGAGGATGCGAGCCTAACGTAGTTTCCTATAGCACCATCATTGACAGTCTTTGCAAGGACACACTAATTGATGAAGCATTCAACCTCTTCGCAGAAATGATCAGTAGAGGTATTACTCCAGACGTTGTTACTTACACGTCTTTGATTCACGGAGTTTGCAAACTAGGCCAGTGGAAACAAGCTACGAGGTTGCTTGATGAAATGTTGAGTACATGTATCTTTCCAGATGTTTGCACCTTCAATGTCTTGGTTGATACTTTCTGTAAGGAAGGGATGGTCATGGAAGCCAAAAGTGTGATTCAAAAGATGATTCAAAGACATATTCAGCCTGATACGATTACATACAACTCACTTATGGACGGTTACTGTTTGCGAGGAGGAACGGACAAGGCAAGACAAGTTTTTGATGTTATGATTAGCAAGGGCTCCATGGTTGATGTTCAGAGCTGTAGCATATTGATACATGGATATTGCAAGGGTAAAATGCTCGATAAGGCTTACAAGATTTTCAAGGAAATGCCTCGTATGGAACTTGTTCCTGATACCGTTACTTATACCACTCTTATTGATGGTCTTTGCAAAGTGGGGAGAATTCAAGAAGCAGAAGAGTTGTTCTCTGAGATGCAGGGTTGTGGCCAGCTTCCAAATGTTCAAACTTATGCTGTGATACTTTATGGCCTGTGTAACAATCATCAACTTTCTACGGCAGTAGAATTGCTCACAGAGATGGAAGCCAGAGAACTGGAACTCGATATTGTAATTTACAATATTGTAATTGAAGGTTTGTGCAAAGCTGGAGAAATTGAATCCGCAAGAGACCTCTTCTGTGGTTTGTCATCAAAAGGAGTTCAGCCTAATGTCAGAACACACACTGTAATGATTCATGGGCTTTGTCATCATGGCTTCATAGTTGAAGCAGAAAAGTTGCTGAGAGAAATGGGAGGGAAAGGATGTTCTCCAAATGGTTGGACCTATAACACCATTATCCGAGGTTTTATCAATAACAATGAGACATCAAGGGCTACGAGACTTATTCAAGAAATGCTTGAGAGGGGTTTCTCTGCAGATGCATCAACTATGGAATTGATTGTTGATTTATTGTCGAAGGATACGGCAGCAGCAGCAATTTGCGTTGGAATAGGCAGCTTTTCTGACCCTATGGGAGCACAAGGGCTTGCACACTTTCTTGAACATATGCTCTTCATGGGGAGTACAAAGTTTCCAGTAAAAAATGAGCCGGCAGAGGGGATTGAGTCCATCAGATTGAGAGCATTAATAGATCTTTTTGATGAAATTATAGAAAAACCATTTTATGATCAACTAAGGACGAAGGAGCAGCTGGGATATGTTCAGTGTGACTGGAAGTTGATATCCGGTGTTTTTGGCTTTTATTTCATAGTTCAGTCATCGGAGTACAACCCAATCTACTTGCAGCGGAGAGTTGACAACTTTATGAATGGTCTGGAAGACATATTGGATTGGATGATGAATTATAGAGGTGGGCTAATGGCAAAGCTATTGGCGAAAAATTCATTCTTTATAAATGAAACCGATCGATTGGAATCAGATTATCCGGGTAAAAGGCACTGTGTATATCCTCTCTGCCTGGTACTGTATACATTTGACTATGCAAAGAGGGTGGCAGAAGAGCTCAGCAGTCTACAGAAGGAGGATGTTGTCAACTTTTACAAGACGTACTTGCAACAATCATCTCCCAAGCATCAGAGACTTGCCATTCGTGTTTGGGGTTGCAAAACTGACTTGAAAGAAGCTGCAGAATTGCGACGGGAGTCTCTGCAGATCATTGAAGACCTTGAAGCCTTTAAGATGTCATCTGTGTTCTATCCTAACGGTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_M16 Peptidase_M16_C Peptidase_M16_M

Protein Analysis

806

Amino Acids

91.19

Weight (kDa)

6.01

Isoelectric Point (pI)

35.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 50 - 99 8.3e-06 PPR repeat family
PPR_3 PF13812 115 - 168 1.3e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 117 - 148 2.9e-07 PPR repeat
PPR_2 PF13041 120 - 169 9.1e-14 PPR repeat family
PPR_long PF17177 136 - 276 5.2e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 154 - 185 5.7e-10 PPR repeat
PPR_2 PF13041 156 - 206 4.5e-16 PPR repeat family
PPR_long PF17177 172 - 326 4.3e-10 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 188 - 220 4.3e-13 PPR repeat
PPR_2 PF13041 192 - 241 1.4e-18 PPR repeat family
MRP-S27 PF10037 195 - 293 2e-06 Mitochondrial 28S ribosomal protein S27
PPR PF01535 195 - 225 1.6e-06 PPR repeat
PPR_3 PF13812 216 - 275 2.5e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 223 - 255 3.5e-12 PPR repeat
PPR_2 PF13041 227 - 276 4.2e-15 PPR repeat family
PPR PF01535 230 - 257 7.6e-06 PPR repeat
PPR_1 PF12854 259 - 290 6.9e-09 PPR repeat
PPR_2 PF13041 262 - 310 3e-14 PPR repeat family
PPR_1 PF12854 294 - 325 1.1e-09 PPR repeat
PPR_2 PF13041 297 - 346 1e-12 PPR repeat family
PPR PF01535 300 - 329 1.8e-06 PPR repeat
PPR_2 PF13041 333 - 381 5.3e-16 PPR repeat family
PPR PF01535 336 - 363 1.9e-06 PPR repeat
PPR_1 PF12854 337 - 360 3.2e-06 PPR repeat
PPR_long PF17177 349 - 453 1.4e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 355 - 411 1.2e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 364 - 396 1e-14 PPR repeat
PPR_2 PF13041 367 - 416 2.8e-17 PPR repeat family
TPR_24 PF23276 369 - 462 1.6e-07 Fungal tetratrico peptide repeats
PPR PF01535 370 - 399 8.7e-10 PPR repeat
PPR_1 PF12854 434 - 462 1.8e-07 PPR repeat
PPR_2 PF13041 438 - 486 6.8e-16 PPR repeat family
PPR_1 PF12854 468 - 500 1.2e-09 PPR repeat
PPR PF01535 476 - 505 1.8e-06 PPR repeat
PPR_2 PF13041 481 - 520 2.7e-09 PPR repeat family
PPR_1 PF12854 503 - 535 5e-06 PPR repeat
PPR_2 PF13041 511 - 554 5.9e-07 PPR repeat family
Peptidase_M16 PF00675 555 - 607 9.5e-11 Insulinase (Peptidase family M16)
PqqF-like_C_4 PF22456 615 - 682 1.9e-14 PQQ synthase PqqF-like, C-terminal lobe domain 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000021)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12700 AT1G12700 AT1G12700 AT1G62680 AT1G62680 AT1G62720 AT1G63230 AT1G63630 AT1G63630 AT1G64583 AT1G64583 AT3G16710 AT3G16710 AT5G16640 AT5G41170 AT5G41170
fragaria_vesca FvH4_2g40320 FvH4_3g13950 FvH4_3g31580 FvH4_3g31590 FvH4_3g33650 FvH4_3g33650 FvH4_3g33650 FvH4_3g35200 FvH4_3g36280 FvH4_3g37111 FvH4_3g37480 FvH4_3g37481 FvH4_3g38020 FvH4_3g38070 FvH4_3g38471 FvH4_3g38472 FvH4_3g38590 FvH4_3g38590 FvH4_3g38590 FvH4_3g38931 FvH4_3g38940 FvH4_3g38940 FvH4_3g39650 FvH4_3g39890 FvH4_3g39940 FvH4_3g40100 FvH4_3g40130 FvH4_3g40940 FvH4_3g40940 FvH4_3g40940 FvH4_3g41340 FvH4_3g41820 FvH4_3g42120 FvH4_3g42121 FvH4_3g42430 FvH4_3g42600 FvH4_3g42700 FvH4_3g43150 FvH4_3g43170 FvH4_3g43330 FvH4_3g44300 FvH4_4g22270 FvH4_4g22280 FvH4_5g09470 FvH4_6g52550
malus_domestica MD03G1099700.v1.1 MD03G1101000.v1.1 MD03G1103400.v1.1 MD03G1103500.v1.1 MD03G1103700.v1.1 MD03G1105300.v1.1 MD03G1106000.v1.1 MD03G1106100.v1.1 MD03G1107100.v1.1 MD03G1108100.v1.1 MD03G1113100.v1.1 MD03G1113300.v1.1 MD03G1113400.v1.1 MD03G1113500.v1.1 MD03G1113600.v1.1 MD03G1113700.v1.1 MD03G1113800.v1.1 MD04G1015600.v1.1 MD11G1115600.v1.1 MD11G1117400.v1.1 MD11G1117500.v1.1 MD11G1122400.v1.1 MD11G1126400.v1.1 MD11G1126500.v1.1 MD11G1128300.v1.1 MD11G1128400.v1.1 MD11G1128600.v1.1 MD11G1128700.v1.1 MD11G1131800.v1.1 MD11G1131900.v1.1 MD11G1132200.v1.1 MD11G1132300.v1.1 MD11G1135500.v1.1
prunus_persica Prupe.3G114600_v2.0.a1 Prupe.3G114700_v2.0.a1 Prupe.3G138000_v2.0.a1 Prupe.6G080500_v2.0.a1 Prupe.6G081600_v2.0.a1 Prupe.6G086000_v2.0.a1 Prupe.6G087400_v2.0.a1 Prupe.6G087400_v2.0.a1 Prupe.6G087400_v2.0.a1 Prupe.6G087400_v2.0.a1 Prupe.6G087600_v2.0.a1 Prupe.6G088600_v2.0.a1 Prupe.6G088600_v2.0.a1 Prupe.6G088600_v2.0.a1 Prupe.6G088600_v2.0.a1 Prupe.6G090500_v2.0.a1 Prupe.6G090600_v2.0.a1 Prupe.6G091000_v2.0.a1 Prupe.6G091400_v2.0.a1 Prupe.6G091500_v2.0.a1 Prupe.6G093300_v2.0.a1 Prupe.6G094000_v2.0.a1 Prupe.6G094000_v2.0.a1 Prupe.6G094000_v2.0.a1 Prupe.6G094000_v2.0.a1 Prupe.6G106300_v2.0.a1 Prupe.6G117200_v2.0.a1 Prupe.6G117400_v2.0.a1 Prupe.6G195600_v2.0.a1 Prupe.6G195700_v2.0.a1 Prupe.8G027800_v2.0.a1 Prupe.8G078200_v2.0.a1 Prupe.8G078200_v2.0.a1
pyrus_communis pycom03g08210 pycom03g08430 pycom03g08450 pycom03g08500 pycom03g08510 pycom03g08640 pycom03g08650 pycom03g08660 pycom04g01160 pycom11g09860 pycom11g10660 pycom11g10700 pycom11g10730 pycom11g10740 pycom11g10890 pycom11g10900 pycom11g10910 pycom11g11040 pycom11g11070 pycom11g11080 pycom11g11090 pycom11g11110 pycom11g11130 pycom11g11140 pycom11g11240
rosa_chinensis RchiOBHm_Chr2g0133531 RchiOBHm_Chr4g0407671 RchiOBHm_Chr5g0027691 RchiOBHm_Chr5g0027731 RchiOBHm_Chr5g0031841 RchiOBHm_Chr5g0041821 RchiOBHm_Chr5g0061091 RchiOBHm_Chr5g0061131 RchiOBHm_Chr5g0061141 RchiOBHm_Chr5g0062111 RchiOBHm_Chr5g0062121 RchiOBHm_Chr5g0062141 RchiOBHm_Chr5g0062151 RchiOBHm_Chr5g0062161 RchiOBHm_Chr5g0062301 RchiOBHm_Chr5g0062311 RchiOBHm_Chr5g0065171 RchiOBHm_Chr5g0066121 RchiOBHm_Chr5g0066211 RchiOBHm_Chr5g0069221 RchiOBHm_Chr5g0069231 RchiOBHm_Chr5g0069241 RchiOBHm_Chr5g0069251 RchiOBHm_Chr5g0069261 RchiOBHm_Chr5g0069321 RchiOBHm_Chr5g0069341 RchiOBHm_Chr5g0069351 RchiOBHm_Chr5g0069571 RchiOBHm_Chr5g0069581 RchiOBHm_Chr5g0069591 RchiOBHm_Chr5g0069601 RchiOBHm_Chr5g0069651 RchiOBHm_Chr5g0070751 RchiOBHm_Chr5g0071481 RchiOBHm_Chr5g0071931 RchiOBHm_Chr5g0071941 RchiOBHm_Chr5g0072771 RchiOBHm_Chr5g0072831 RchiOBHm_Chr5g0072861 RchiOBHm_Chr5g0072871 RchiOBHm_Chr5g0072901 RchiOBHm_Chr5g0072921 RchiOBHm_Chr5g0073691 RchiOBHm_Chr5g0073711 RchiOBHm_Chr5g0073761 RchiOBHm_Chr5g0074141 RchiOBHm_Chr5g0074181 RchiOBHm_Chr5g0074191 RchiOBHm_Chr5g0074201 RchiOBHm_Chr5g0074231 RchiOBHm_Chr5g0074941 RchiOBHm_Chr5g0074951 RchiOBHm_Chr5g0074961 RchiOBHm_Chr5g0074981 RchiOBHm_Chr5g0075791 RchiOBHm_Chr5g0076111 RchiOBHm_Chr5g0076121 RchiOBHm_Chr5g0076231 RchiOBHm_Chr5g0076241 RchiOBHm_Chr5g0076251 RchiOBHm_Chr5g0076261 RchiOBHm_Chr5g0077441 RchiOBHm_Chr5g0077451 RchiOBHm_Chr5g0077481 RchiOBHm_Chr5g0077511 RchiOBHm_Chr5g0077521 RchiOBHm_Chr5g0077541 RchiOBHm_Chr5g0078461 RchiOBHm_Chr5g0078471 RchiOBHm_Chr5g0078541 RchiOBHm_Chr5g0078551 RchiOBHm_Chr5g0078591 RchiOBHm_Chr5g0078611 RchiOBHm_Chr5g0078801 RchiOBHm_Chr5g0078811 RchiOBHm_Chr7g0226411 RchiOBHm_Chr7g0226421
rosa_laevigata RLG00000001731 RLG00000001921 RLG00000007507 RLG00000008174 RLG00000008512 RLG00000029432 RLG00000033036 RLG00000033038 RLG00000034096 RLG00000035428 RLG00000035433 RLG00000035434 RLG00000035435 RLG00000035535 RLG00000035536 RLG00000035548 RLG00000035751 RLG00000035754 RLG00000035764 RLG00000035882 RLG00000036044 RLG00000036048 RLG00000036060 RLG00000036061 RLG00000036062 RLG00000036063 RLG00000036070 RLG00000036078 RLG00000036079 RLG00000036080 RLG00000036156 RLG00000036218 RLG00000036219 RLG00000036263 RLG00000036264 RLG00000036331 RLG00000036332 RLG00000036333 RLG00000036338 RLG00000036339 RLG00000036344 RLG00000036345 RLG00000036347 RLG00000036348 RLG00000036349 RLG00000036405 RLG00000036416 RLG00000036457 RLG00000036459 RLG00000036515 RLG00000036516 RLG00000036517 RLG00000036646 RLG00000036697 RLG00000036698 RLG00000036699 RLG00000036702 RLG00000036774 RLG00000036775 RLG00000036786 RLG00000036787
rosa_multiflora Rmu_co8164206.1_g000001 Rmu_co8198940.1_g000001 Rmu_co8222088.1_g000001 Rmu_co8267751.1_g000001 Rmu_co8339831.1_g000001 Rmu_sc0000573.1_g000056 Rmu_sc0000573.1_g000057 Rmu_sc0000848.1_g000018 Rmu_sc0000861.1_g000039 Rmu_sc0000956.1_g000006 Rmu_sc0000956.1_g000007 Rmu_sc0000987.1_g000004 Rmu_sc0001264.1_g000011 Rmu_sc0001264.1_g000023 Rmu_sc0001366.1_g000024 Rmu_sc0001366.1_g000034 Rmu_sc0001647.1_g000023 Rmu_sc0001647.1_g000025 Rmu_sc0002101.1_g000008 Rmu_sc0002149.1_g000019 Rmu_sc0002296.1_g000015 Rmu_sc0002296.1_g000018 Rmu_sc0002627.1_g000002 Rmu_sc0002658.1_g000002 Rmu_sc0002658.1_g000004 Rmu_sc0002658.1_g000005 Rmu_sc0002658.1_g000008 Rmu_sc0003160.1_g000001 Rmu_sc0003160.1_g000002 Rmu_sc0003160.1_g000027 Rmu_sc0003264.1_g000007 Rmu_sc0003323.1_g000018 Rmu_sc0003542.1_g000014 Rmu_sc0003945.1_g000018 Rmu_sc0004140.1_g000044 Rmu_sc0004140.1_g000045 Rmu_sc0004277.1_g000049 Rmu_sc0004277.1_g000050 Rmu_sc0004277.1_g000051 Rmu_sc0004277.1_g000056 Rmu_sc0004277.1_g000059 Rmu_sc0004277.1_g000064 Rmu_sc0004277.1_g000065 Rmu_sc0004277.1_g000066 Rmu_sc0004277.1_g000071 Rmu_sc0004277.1_g000073 Rmu_sc0004277.1_g000074 Rmu_sc0004277.1_g000080 Rmu_sc0004277.1_g000081 Rmu_sc0004277.1_g000082 Rmu_sc0004501.1_g000006 Rmu_sc0004501.1_g000008 Rmu_sc0004501.1_g000009 Rmu_sc0005069.1_g000010 Rmu_sc0005069.1_g000013 Rmu_sc0005069.1_g000028 Rmu_sc0005255.1_g000008 Rmu_sc0005255.1_g000009 Rmu_sc0005860.1_g000003 Rmu_sc0005961.1_g000008 Rmu_sc0005961.1_g000009 Rmu_sc0006031.1_g000026 Rmu_sc0006952.1_g000035 Rmu_sc0006984.1_g000001 Rmu_sc0007385.1_g000011 Rmu_sc0007385.1_g000018 Rmu_sc0007385.1_g000019 Rmu_sc0007385.1_g000025 Rmu_sc0009248.1_g000008 Rmu_sc0009248.1_g000016 Rmu_sc0009685.1_g000001 Rmu_sc0009685.1_g000008 Rmu_sc0009911.1_g000004 Rmu_sc0009988.1_g000002 Rmu_sc0013565.1_g000003 Rmu_sc0013615.1_g000005 Rmu_sc0015509.1_g000001 Rmu_sc0016676.1_g000001 Rmu_sc0019146.1_g000001 Rmu_sc0023658.1_g000001 Rmu_sc0026875.1_g000001 Rmu_sc0032705.1_g000003 Rmu_sc0036016.1_g000001 Rmu_sc0038790.1_g000001 Rmu_sc0038790.1_g000002 Rmu_sc0038790.1_g000003 Rmu_sc0041070.1_g000001 Rmu_sc0041071.1_g000001
rosa_roxburghii Rroxscaffold_1G00004470 Rroxscaffold_1G00005600 Rroxscaffold_1G00006630 Rroxscaffold_1G00006640 Rroxscaffold_1G00006680 Rroxscaffold_1G00007240 Rroxscaffold_1G00007270 Rroxscaffold_1G00007600 Rroxscaffold_1G00008320 Rroxscaffold_1G00008330 Rroxscaffold_1G00008390 Rroxscaffold_1G00008400 Rroxscaffold_1G00009250 Rroxscaffold_1G00009640 Rroxscaffold_1G00010430 Rroxscaffold_1G00011430 Rroxscaffold_1G00011580 Rroxscaffold_1G00014270 Rroxscaffold_1G00017730 Rroxscaffold_1G00018390 Rroxscaffold_1G00018400 Rroxscaffold_1G00018410 Rroxscaffold_1G00018550 Rroxscaffold_1G00018580 Rroxscaffold_1G00018590 Rroxscaffold_1G00019560 Rroxscaffold_1G00038700 Rroxscaffold_1G00038710 Rroxscaffold_1G00051880 Rroxscaffold_2G00122050 Rroxscaffold_2G00122060 Rroxscaffold_2G00122070 Rroxscaffold_3G00232850 Rroxscaffold_3G00233170 Rroxscaffold_3G00235240 Rroxscaffold_3G00236030 Rroxscaffold_4G00316710 Rroxscaffold_5G00352260 Rroxscaffold_5G00354420 Rroxscaffold_5G00358050 Rroxscaffold_5G00366080 Rroxscaffold_5G00384640 Rroxscaffold_6G00394470
rosa_rugosa Rorug02G0236100 Rorug02G0312600 Rorug02G0312600 Rorug04G0081200 Rorug04G0099500 Rorug04G0125700 Rorug04G0192800 Rorug04G0192800 Rorug05G0100300 Rorug05G0195500 Rorug05G0337500 Rorug05G0338000 Rorug05G0338100 Rorug05G0338200 Rorug05G0346000 Rorug05G0346100 Rorug05G0346300 Rorug05G0346400 Rorug05G0347500 Rorug05G0347500 Rorug05G0347700 Rorug05G0347800 Rorug05G0376600 Rorug05G0376600 Rorug05G0379000 Rorug05G0396800 Rorug05G0397000 Rorug05G0397000 Rorug05G0397000 Rorug05G0397200 Rorug05G0398400 Rorug05G0398500 Rorug05G0399000 Rorug05G0412600 Rorug05G0412700 Rorug05G0415700 Rorug05G0419800 Rorug05G0419900 Rorug05G0420000 Rorug05G0420100 Rorug05G0420200 Rorug05G0420500 Rorug05G0429200 Rorug05G0429300 Rorug05G0429400 Rorug05G0429600 Rorug05G0429600 Rorug05G0442200 Rorug05G0446100 Rorug05G0446100 Rorug05G0446100 Rorug05G0446100 Rorug05G0446100 Rorug05G0446200 Rorug05G0446200 Rorug05G0446300 Rorug05G0455000 Rorug05G0455000 Rorug05G0455200 Rorug05G0455400 Rorug05G0461000 Rorug06G0021200 Rorug07G0220800 Rorug07G0237100
rosa_samantha Rh4DG139600 Rh7AG368500 Rh7DG382400
rosa_wichuraiana Rw0G005990 Rw0G015820 Rw0G023090 Rw1G011560 Rw5G026460 Rw5G037630 Rw5G040110 Rw5G042370 Rw5G042480 Rw5G042500 Rw5G042520 Rw5G043540 Rw5G043840 Rw5G044270 Rw5G044280 Rw5G044310 Rw5G044320 Rw5G044940 Rw5G045650 Rw5G045660 Rw5G045670 Rw5G046760 Rw5G047270 Rw5G047280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2102
AatII GACGTC 1 cut(s) 366
AccI GTMKAC 2 cut(s) 2177, 2221
AciI CCGC 2 cut(s) 1371, 1996
AcoI YGGCCR 1 cut(s) 1195
AcsI RAATTY 3 cut(s) 429, 1152, 2089
AcyI GRCGYC 1 cut(s) 363
AfaI GTAC 5 cut(s) 772, 1774, 1976, 2172, 2258
AfiI CCNNNNNNNGG 1 cut(s) 1805
AflIII ACRYGT 2 cut(s) 696, 773
AjiI CACGTC 1 cut(s) 699
AjnI CCWGG 1 cut(s) 2166
AloI GAACNNNNNNTCC 2 cut(s) 1498, 1530
AluBI AGCT 9 cut(s) 743, 1008, 1201, 1355, 1707, 1900, 2077, 2212, 2333
AluI AGCT 9 cut(s) 743, 1008, 1201, 1355, 1707, 1900, 2077, 2212, 2333
Alw21I GWGCWC 2 cut(s) 1729, 2214
Alw26I GTCTC 8 cut(s) 46, 443, 510, 1371, 1565, 1582, 2281, 2358
AoxI GGCC 3 cut(s) 727, 1195, 1237
ApeKI GCWGC 9 cut(s) 422, 527, 1676, 1679, 1682, 1704, 1897, 1993, 2333
ApoI RAATTY 3 cut(s) 429, 1152, 2089
ArsI GACNNNNNNTTYG 2 cut(s) 2280, 2312
AseI ATTAAT 1 cut(s) 1835
Asp700I GAANNNNTTC 4 cut(s) 116, 129, 250, 1095
AspS9I GGNCC 1 cut(s) 1530
AsuC2I CCSGG 1 cut(s) 2136
AsuHPI GGTGA 3 cut(s) 361, 367, 427
AvaII GGWCC 1 cut(s) 1530
AxyI CCTNAGG 1 cut(s) 417
BalI TGGCCA 1 cut(s) 1197
BanII GRGCYC 2 cut(s) 989, 2214
BbsI GAAGAC 3 cut(s) 344, 2034, 2376
Bbv12I GWGCWC 2 cut(s) 1729, 2214
BbvI GCAGC 9 cut(s) 409, 514, 1688, 1691, 1694, 1716, 1909, 2005, 2320
BccI CCATC 6 cut(s) 544, 605, 829, 1124, 1282, 1826
BceAI ACGGC 5 cut(s) 123, 194, 406, 1281, 1689
BciT130I CCWGG 1 cut(s) 2168
BciVI GTATCC 1 cut(s) 1663
BclI TGATCA 2 cut(s) 660, 1876
BcnI CCSGG 1 cut(s) 2136
BcoDI GTCTC 8 cut(s) 46, 443, 510, 1371, 1565, 1582, 2281, 2358
BfaI CTAG 1 cut(s) 725
BfmI CTRYAG 6 cut(s) 589, 1009, 1623, 2222, 2334, 2357
BfuI GTATCC 1 cut(s) 1663
BglII AGATCT 1 cut(s) 1840
BisI GCNGC 9 cut(s) 423, 528, 1677, 1680, 1683, 1705, 1898, 1994, 2334
BlpI GCTNAGC 1 cut(s) 2213
BlsI GCNGC 9 cut(s) 424, 529, 1678, 1681, 1684, 1706, 1899, 1995, 2335
Bme1390I CCNGG 2 cut(s) 2136, 2168
Bme18I GGWCC 1 cut(s) 1530
BmgBI CACGTC 1 cut(s) 699
BmgT120I GGNCC 1 cut(s) 1530
BmiI GGNNCC 1 cut(s) 988
BmrFI CCNGG 2 cut(s) 2136, 2168
BmsI GCATC 7 cut(s) 94, 222, 557, 1173, 1618, 1640, 2290
BoxI GACNNNNGTC 1 cut(s) 2350
BpiI GAAGAC 3 cut(s) 344, 2034, 2376
BplI GAGNNNNNCTC 2 cut(s) 1160, 1192
BpmI CTGGAG 3 cut(s) 467, 663, 1377
Bpu1102I GCTNAGC 1 cut(s) 2213
BpuEI CTTGAG 1 cut(s) 1628
BpuMI CCSGG 1 cut(s) 2136
Bsa29I ATCGAT 1 cut(s) 2116
BsaBI GATNNNNATC 1 cut(s) 2122
BsaHI GRCGYC 1 cut(s) 363
BsaI GGTCTC 1 cut(s) 1371
BsaJI CCNNGG 2 cut(s) 990, 1549
BsaWI WCCGGW 1 cut(s) 1934
Bsc4I CCNNNNNNNGG 1 cut(s) 1805
Bse118I RCCGGY 1 cut(s) 1798
Bse1I ACTGG 4 cut(s) 730, 1308, 1784, 1925
Bse21I CCTNAGG 1 cut(s) 417
Bse8I GATNNNNATC 1 cut(s) 2122
BseBI CCWGG 1 cut(s) 2168
BseCI ATCGAT 1 cut(s) 2116
BseDI CCNNGG 2 cut(s) 990, 1549
BseGI GGATG 6 cut(s) 109, 572, 840, 1517, 2049, 2239
BseJI GATNNNNATC 1 cut(s) 2122
BseLI CCNNNNNNNGG 1 cut(s) 1805
BseMII CTCAG 5 cut(s) 182, 408, 1170, 1481, 2227
BseNI ACTGG 4 cut(s) 730, 1308, 1784, 1925
BseRI GAGGAG 2 cut(s) 113, 951
BseXI GCAGC 9 cut(s) 409, 514, 1688, 1691, 1694, 1716, 1909, 2005, 2320
BseYI CCCAGC 1 cut(s) 1900
BsgI GTGCAG 1 cut(s) 408
Bsh1285I CGRYCG 1 cut(s) 2116
BshFI GGCC 3 cut(s) 729, 1197, 1239
BshVI ATCGAT 1 cut(s) 2116
BsiEI CGRYCG 1 cut(s) 2116
BsiHKAI GWGCWC 2 cut(s) 1729, 2214
BsiSI CCGG 3 cut(s) 1799, 1935, 2135
BslFI GGGAC 1 cut(s) 126
BslI CCNNNNNNNGG 1 cut(s) 1805
BsmAI GTCTC 8 cut(s) 46, 443, 510, 1371, 1565, 1582, 2281, 2358
BsmFI GGGAC 1 cut(s) 126
BsmI GAATGC 1 cut(s) 638
BsnI GGCC 3 cut(s) 729, 1197, 1239
Bso31I GGTCTC 1 cut(s) 1371
Bsp1286I GDGCHC 3 cut(s) 989, 1729, 2214
Bsp143I GATC 5 cut(s) 660, 1840, 1876, 2113, 2361
Bsp1720I GCTNAGC 1 cut(s) 2213
Bsp19I CCATGG 1 cut(s) 990
BspACI CCGC 2 cut(s) 1371, 1996
BspANI GGCC 3 cut(s) 729, 1197, 1239
BspCNI CTCAG 5 cut(s) 181, 409, 1171, 1482, 2226
BspDI ATCGAT 1 cut(s) 2116
BspLI GGNNCC 1 cut(s) 988
BspMAI CTGCAG 3 cut(s) 1627, 2338, 2361
BspQI GCTCTTC 2 cut(s) 1766, 2202
BspTNI GGTCTC 1 cut(s) 1371
BsrFI RCCGGY 1 cut(s) 1798
BsrI ACTGG 4 cut(s) 730, 1308, 1784, 1925
BssAI RCCGGY 1 cut(s) 1798
BssECI CCNNGG 2 cut(s) 990, 1549
BssMI GATC 5 cut(s) 660, 1840, 1876, 2113, 2361
BssNAI GTATAC 1 cut(s) 2178
BssNI GRCGYC 1 cut(s) 363
BssT1I CCWWGG 1 cut(s) 990
Bst1107I GTATAC 1 cut(s) 2178
Bst2UI CCWGG 1 cut(s) 2168
Bst4CI ACNGT 8 cut(s) 608, 923, 929, 1108, 1435, 2150, 2175, 2414
Bst6I CTCTTC 5 cut(s) 653, 1161, 1388, 1766, 2202
BstACI GRCGYC 1 cut(s) 363
BstC8I GCNNGC 4 cut(s) 572, 1199, 1737, 1800
BstDEI CTNAG 6 cut(s) 168, 417, 1179, 1490, 1883, 2213
BstDSI CCRYGG 1 cut(s) 990
BstF5I GGATG 6 cut(s) 109, 572, 840, 1517, 2049, 2239
BstKTI GATC 5 cut(s) 663, 1843, 1879, 2116, 2364
BstMAI GTCTC 8 cut(s) 46, 443, 510, 1371, 1565, 1582, 2281, 2358
BstMBI GATC 5 cut(s) 660, 1840, 1876, 2113, 2361
BstMCI CGRYCG 1 cut(s) 2116
BstMWI GCNNNNNNNGC 2 cut(s) 726, 1682
BstNI CCWGG 1 cut(s) 2168
BstNSI RCATGY 1 cut(s) 777
BstPAI GACNNNNGTC 1 cut(s) 2350
BstSCI CCNGG 2 cut(s) 2134, 2166
BstSFI CTRYAG 6 cut(s) 589, 1009, 1623, 2222, 2334, 2357
BstV1I GCAGC 9 cut(s) 409, 514, 1688, 1691, 1694, 1716, 1909, 2005, 2320
BstV2I GAAGAC 3 cut(s) 344, 2034, 2376
BstX2I RGATCY 1 cut(s) 1840
BstXI CCANNNNNNTGG 3 cut(s) 445, 1303, 1527
BstYI RGATCY 1 cut(s) 1840
BstZ17I GTATAC 1 cut(s) 2178
Bsu15I ATCGAT 1 cut(s) 2116
Bsu36I CCTNAGG 1 cut(s) 417
BsuI GTATCC 1 cut(s) 1663
BsuRI GGCC 3 cut(s) 729, 1197, 1239
BsuTUI ATCGAT 1 cut(s) 2116
BtgI CCRYGG 1 cut(s) 990
BtrI CACGTC 1 cut(s) 699
BtsCI GGATG 6 cut(s) 109, 572, 840, 1517, 2049, 2239
BtsI GCAGTG 1 cut(s) 522
BtsIMutI CAGTG 5 cut(s) 522, 737, 1431, 1919, 2146
Cac8I GCNNGC 4 cut(s) 572, 1199, 1737, 1800
Cfr10I RCCGGY 1 cut(s) 1798
Cfr13I GGNCC 1 cut(s) 1530
ClaI ATCGAT 1 cut(s) 2116
Csp6I GTAC 5 cut(s) 771, 1773, 1975, 2171, 2257
CspCI CAANNNNNGTGG 4 cut(s) 1108, 1143, 2181, 2216
CviQI GTAC 5 cut(s) 771, 1773, 1975, 2171, 2257
DdeI CTNAG 6 cut(s) 168, 417, 1179, 1490, 1883, 2213
DpnI GATC 5 cut(s) 662, 1842, 1878, 2115, 2363
DpnII GATC 5 cut(s) 660, 1840, 1876, 2113, 2361
EaeI YGGCCR 1 cut(s) 1195
Eam1104I CTCTTC 5 cut(s) 653, 1161, 1388, 1766, 2202
EarI CTCTTC 5 cut(s) 653, 1161, 1388, 1766, 2202
Ecl136II GAGCTC 1 cut(s) 2212
Eco130I CCWWGG 1 cut(s) 990
Eco24I GRGCYC 2 cut(s) 989, 2214
Eco31I GGTCTC 1 cut(s) 1371
Eco32I GATATC 1 cut(s) 1932
Eco47I GGWCC 1 cut(s) 1530
Eco53kI GAGCTC 1 cut(s) 2212
Eco81I CCTNAGG 1 cut(s) 417
EcoICRI GAGCTC 1 cut(s) 2212
EcoRI GAATTC 1 cut(s) 1152
EcoRII CCWGG 1 cut(s) 2166
EcoRV GATATC 1 cut(s) 1932
EcoT14I CCWWGG 1 cut(s) 990
EcoT22I ATGCAT 1 cut(s) 1633
EcoT38I GRGCYC 2 cut(s) 989, 2214
ErhI CCWWGG 1 cut(s) 990
FalI AAGNNNNNCTT 4 cut(s) 1590, 1622, 2243, 2275
FaqI GGGAC 1 cut(s) 126
FauNDI CATATG 1 cut(s) 1755
FbaI TGATCA 2 cut(s) 660, 1876
FblI GTMKAC 2 cut(s) 2177, 2221
Fnu4HI GCNGC 9 cut(s) 423, 528, 1677, 1680, 1683, 1705, 1898, 1994, 2334
FokI GGATG 6 cut(s) 116, 579, 847, 1524, 2056, 2246
FriOI GRGCYC 2 cut(s) 989, 2214
Fsp4HI GCNGC 9 cut(s) 423, 528, 1677, 1680, 1683, 1705, 1898, 1994, 2334
FspBI CTAG 1 cut(s) 725
GluI GCNGC 9 cut(s) 423, 528, 1677, 1680, 1683, 1705, 1898, 1994, 2334
GsaI CCCAGC 1 cut(s) 1904
GsuI CTGGAG 3 cut(s) 467, 663, 1377
HaeIII GGCC 3 cut(s) 729, 1197, 1239
HapII CCGG 3 cut(s) 1799, 1935, 2135
Hin1I GRCGYC 1 cut(s) 363
HincII GTYRAC 4 cut(s) 22, 182, 2005, 2242
HindII GTYRAC 4 cut(s) 22, 182, 2005, 2242
HpaII CCGG 3 cut(s) 1799, 1935, 2135
HphI GGTGA 3 cut(s) 361, 367, 427
Hpy166II GTNNAC 6 cut(s) 22, 182, 2005, 2178, 2222, 2242
Hpy188III TCNNGA 9 cut(s) 51, 243, 680, 785, 1100, 1157, 1598, 1748, 2024
Hpy8I GTNNAC 6 cut(s) 22, 182, 2005, 2178, 2222, 2242
Hpy99I CGWCG 2 cut(s) 368, 2349
HpyAV CCTTC 8 cut(s) 382, 490, 808, 824, 1334, 1660, 1885, 2221
HpyCH4III ACNGT 8 cut(s) 608, 923, 929, 1108, 1435, 2150, 2175, 2414
HpyCH4IV ACGT 6 cut(s) 363, 479, 579, 684, 698, 2255
HpyF10VI GCNNNNNNNGC 2 cut(s) 726, 1682
HpyF3I CTNAG 6 cut(s) 168, 417, 1179, 1490, 1883, 2213
HpySE526I ACGT 6 cut(s) 363, 479, 579, 684, 698, 2255
Hsp92I GRCGYC 1 cut(s) 363
KroI GCCGGC 1 cut(s) 1798
KroNI GCCGGC 1 cut(s) 1800
Ksp22I TGATCA 2 cut(s) 660, 1876
Kzo9I GATC 5 cut(s) 660, 1840, 1876, 2113, 2361
LguI GCTCTTC 2 cut(s) 1766, 2202
LmnI GCTCC 3 cut(s) 992, 1724, 1894
Lsp1109I GCAGC 9 cut(s) 409, 514, 1688, 1691, 1694, 1716, 1909, 2005, 2320
LweI GCATC 7 cut(s) 94, 222, 557, 1173, 1618, 1640, 2290
MaeI CTAG 1 cut(s) 725
MaeII ACGT 6 cut(s) 363, 479, 579, 684, 698, 2255
MaeIII GTNAC 7 cut(s) 367, 475, 688, 923, 1108, 1244, 1916
MalI GATC 5 cut(s) 662, 1842, 1878, 2115, 2363
MboI GATC 5 cut(s) 660, 1840, 1876, 2113, 2361
MflI RGATCY 1 cut(s) 1840
MhlI GDGCHC 3 cut(s) 989, 1729, 2214
MlsI TGGCCA 1 cut(s) 1197
MluNI TGGCCA 1 cut(s) 1197
MlyI GAGTC 2 cut(s) 1823, 2360
MmeI TCCRAC 2 cut(s) 1508, 1675
Mox20I TGGCCA 1 cut(s) 1197
Mph1103I ATGCAT 1 cut(s) 1633
MroNI GCCGGC 1 cut(s) 1798
MroXI GAANNNNTTC 4 cut(s) 116, 129, 250, 1095
MscI TGGCCA 1 cut(s) 1197
MseI TTAA 3 cut(s) 282, 1835, 2385
MslI CAYNNNNRTG 4 cut(s) 440, 491, 1286, 1436
Msp20I TGGCCA 1 cut(s) 1197
MspA1I CMGCKG 2 cut(s) 1900, 1996
MspI CCGG 3 cut(s) 1799, 1935, 2135
MspR9I CCNGG 2 cut(s) 2136, 2168
Mva1269I GAATGC 1 cut(s) 638
MvaI CCWGG 1 cut(s) 2168
MwoI GCNNNNNNNGC 2 cut(s) 726, 1682
NaeI GCCGGC 1 cut(s) 1800
NciI CCSGG 1 cut(s) 2136
NcoI CCATGG 1 cut(s) 990
NdeI CATATG 1 cut(s) 1755
NdeII GATC 5 cut(s) 660, 1840, 1876, 2113, 2361
NgoMIV GCCGGC 1 cut(s) 1798
NlaIV GGNNCC 1 cut(s) 988
NmuCI GTSAC 2 cut(s) 367, 1916
NsiI ATGCAT 1 cut(s) 1633
NspI RCATGY 1 cut(s) 777
PciI ACATGT 1 cut(s) 773
PciSI GCTCTTC 2 cut(s) 1766, 2202
PctI GAATGC 1 cut(s) 638
PdiI GCCGGC 1 cut(s) 1800
PdmI GAANNNNTTC 4 cut(s) 116, 129, 250, 1095
PfeI GAWTC 8 cut(s) 246, 301, 706, 859, 871, 1367, 1441, 2123
PflFI GACNNNGTC 1 cut(s) 365
PkrI GCNGC 9 cut(s) 424, 529, 1678, 1681, 1684, 1706, 1899, 1995, 2335
Ple19I CGATCG 1 cut(s) 2116
PleI GAGTC 2 cut(s) 1822, 2359
PpsI GAGTC 2 cut(s) 1822, 2359
PscI ACATGT 1 cut(s) 773
PshAI GACNNNNGTC 1 cut(s) 2350
PshBI ATTAAT 1 cut(s) 1835
PsiI TTATAA 1 cut(s) 2102
Psp124BI GAGCTC 1 cut(s) 2214
Psp6I CCWGG 1 cut(s) 2166
PspFI CCCAGC 1 cut(s) 1900
PspGI CCWGG 1 cut(s) 2166
PspN4I GGNNCC 1 cut(s) 988
PspPI GGNCC 1 cut(s) 1530
PstI CTGCAG 3 cut(s) 1627, 2338, 2361
PsuI RGATCY 1 cut(s) 1840
PsyI GACNNNGTC 1 cut(s) 365
PvuI CGATCG 1 cut(s) 2116
PvuII CAGCTG 1 cut(s) 1900
RsaI GTAC 5 cut(s) 772, 1774, 1976, 2172, 2258
RsaNI GTAC 5 cut(s) 771, 1773, 1975, 2171, 2257
RseI CAYNNNNRTG 4 cut(s) 440, 491, 1286, 1436
SacI GAGCTC 1 cut(s) 2214
SapI GCTCTTC 2 cut(s) 1766, 2202
SaqAI TTAA 3 cut(s) 282, 1835, 2385
SatI GCNGC 9 cut(s) 423, 528, 1677, 1680, 1683, 1705, 1898, 1994, 2334
Sau3AI GATC 5 cut(s) 660, 1840, 1876, 2113, 2361
Sau96I GGNCC 1 cut(s) 1530
SchI GAGTC 2 cut(s) 1823, 2360
ScrFI CCNGG 2 cut(s) 2136, 2168
SduI GDGCHC 3 cut(s) 989, 1729, 2214
SfaNI GCATC 7 cut(s) 94, 222, 557, 1173, 1618, 1640, 2290
SfcI CTRYAG 6 cut(s) 589, 1009, 1623, 2222, 2334, 2357
SinI GGWCC 1 cut(s) 1530
SmiMI CAYNNNNRTG 4 cut(s) 440, 491, 1286, 1436
SmlI CTYRAG 1 cut(s) 1607
SmoI CTYRAG 1 cut(s) 1607
SsiI CCGC 2 cut(s) 1371, 1996
SspI AATATT 1 cut(s) 1330
SspMI CTAG 1 cut(s) 725
SstI GAGCTC 1 cut(s) 2214
StyD4I CCNGG 2 cut(s) 2134, 2166
StyI CCWWGG 1 cut(s) 990
TaaI ACNGT 8 cut(s) 608, 923, 929, 1108, 1435, 2150, 2175, 2414
TaiI ACGT 6 cut(s) 366, 482, 582, 687, 701, 2258
TaqI TCGA 5 cut(s) 50, 1050, 1311, 1664, 2116
TatI WGTACW 3 cut(s) 770, 1772, 1974
TfiI GAWTC 8 cut(s) 246, 301, 706, 859, 871, 1367, 1441, 2123
Tru1I TTAA 3 cut(s) 282, 1835, 2385
Tru9I TTAA 3 cut(s) 282, 1835, 2385
TscAI CASTG 5 cut(s) 529, 737, 1438, 1919, 2153
TseFI GTSAC 2 cut(s) 367, 1916
TseI GCWGC 9 cut(s) 422, 527, 1676, 1679, 1682, 1704, 1897, 1993, 2333
Tsp45I GTSAC 2 cut(s) 367, 1916
TspGWI ACGGA 4 cut(s) 7, 110, 726, 959
TspRI CASTG 5 cut(s) 529, 737, 1438, 1919, 2153
Tth111I GACNNNGTC 1 cut(s) 365
VpaK11BI GGWCC 1 cut(s) 1530
VspI ATTAAT 1 cut(s) 1835
XapI RAATTY 3 cut(s) 429, 1152, 2089
XceI RCATGY 1 cut(s) 777
XmiI GTMKAC 2 cut(s) 2177, 2221
XmnI GAANNNNTTC 4 cut(s) 116, 129, 250, 1095
XspI CTAG 1 cut(s) 725
ZraI GACGTC 1 cut(s) 364
Zsp2I ATGCAT 1 cut(s) 1633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.