Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 471 |
| Acc36I | ACCTGC | 1 cut(s) | 548 |
| AccII | CGCG | 1 cut(s) | 241 |
| AccIII | TCCGGA | 1 cut(s) | 781 |
| AciI | CCGC | 1 cut(s) | 1620 |
| AclWI | GGATC | 2 cut(s) | 129, 1670 |
| AcoI | YGGCCR | 1 cut(s) | 1297 |
| AcsI | RAATTY | 1 cut(s) | 534 |
| AcuI | CTGAAG | 2 cut(s) | 26, 886 |
| AcyI | GRCGYC | 1 cut(s) | 468 |
| AfaI | GTAC | 2 cut(s) | 1528, 1683 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1348, 1380 |
| AluBI | AGCT | 6 cut(s) | 632, 845, 956, 1195, 1352, 1475 |
| AluI | AGCT | 6 cut(s) | 632, 845, 956, 1195, 1352, 1475 |
| Alw26I | GTCTC | 2 cut(s) | 716, 1562 |
| AlwI | GGATC | 2 cut(s) | 129, 1670 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 714 |
| Aor13HI | TCCGGA | 1 cut(s) | 781 |
| AoxI | GGCC | 3 cut(s) | 1158, 1297, 1459 |
| ApeKI | GCWGC | 4 cut(s) | 45, 48, 527, 632 |
| ApoI | RAATTY | 1 cut(s) | 534 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 218, 231, 749, 1590 |
| AsuHPI | GGTGA | 6 cut(s) | 466, 472, 532, 580, 880, 889 |
| AxyI | CCTNAGG | 1 cut(s) | 522 |
| BalI | TGGCCA | 1 cut(s) | 1299 |
| BanII | GRGCYC | 1 cut(s) | 1091 |
| BbsI | GAAGAC | 3 cut(s) | 449, 463, 1372 |
| BbvI | GCAGC | 4 cut(s) | 57, 60, 514, 619 |
| BccI | CCATC | 6 cut(s) | 177, 649, 707, 931, 1016, 1514 |
| BceAI | ACGGC | 2 cut(s) | 384, 511 |
| BciVI | GTATCC | 3 cut(s) | 715, 1124, 1660 |
| BcoDI | GTCTC | 2 cut(s) | 716, 1562 |
| BfaI | CTAG | 1 cut(s) | 768 |
| BfmI | CTRYAG | 1 cut(s) | 1371 |
| BfuAI | ACCTGC | 1 cut(s) | 548 |
| BfuI | GTATCC | 3 cut(s) | 715, 1124, 1660 |
| BisI | GCNGC | 4 cut(s) | 46, 49, 528, 633 |
| BlsI | GCNGC | 4 cut(s) | 47, 50, 529, 634 |
| BmiI | GGNNCC | 1 cut(s) | 1090 |
| BmsI | GCATC | 6 cut(s) | 196, 659, 1275, 1411, 1615, 1637 |
| BpiI | GAAGAC | 3 cut(s) | 449, 463, 1372 |
| BpmI | CTGGAG | 1 cut(s) | 1500 |
| BsaHI | GRCGYC | 1 cut(s) | 468 |
| BsaJI | CCNNGG | 3 cut(s) | 1092, 1546, 1662 |
| BsaWI | WCCGGW | 1 cut(s) | 781 |
| Bse1I | ACTGG | 1 cut(s) | 839 |
| Bse21I | CCTNAGG | 1 cut(s) | 522 |
| Bse3DI | GCAATG | 1 cut(s) | 40 |
| BseAI | TCCGGA | 1 cut(s) | 781 |
| BseDI | CCNNGG | 3 cut(s) | 1092, 1546, 1662 |
| BseGI | GGATG | 6 cut(s) | 211, 580, 674, 790, 942, 1027 |
| BseMI | GCAATG | 1 cut(s) | 40 |
| BseMII | CTCAG | 3 cut(s) | 513, 768, 1272 |
| BseNI | ACTGG | 1 cut(s) | 839 |
| BseRI | GAGGAG | 2 cut(s) | 75, 1053 |
| BseXI | GCAGC | 4 cut(s) | 57, 60, 514, 619 |
| BseYI | CCCAGC | 1 cut(s) | 1352 |
| BsgI | GTGCAG | 2 cut(s) | 513, 572 |
| Bsh1236I | CGCG | 1 cut(s) | 241 |
| BshFI | GGCC | 3 cut(s) | 1160, 1299, 1461 |
| BsiSI | CCGG | 2 cut(s) | 572, 782 |
| BslFI | GGGAC | 1 cut(s) | 503 |
| BsmAI | GTCTC | 2 cut(s) | 716, 1562 |
| BsmFI | GGGAC | 1 cut(s) | 503 |
| BsnI | GGCC | 3 cut(s) | 1160, 1299, 1461 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1091 |
| Bsp13I | TCCGGA | 1 cut(s) | 781 |
| Bsp143I | GATC | 3 cut(s) | 134, 1069, 1675 |
| Bsp19I | CCATGG | 1 cut(s) | 1092 |
| BspACI | CCGC | 1 cut(s) | 1620 |
| BspANI | GGCC | 3 cut(s) | 1160, 1299, 1461 |
| BspCNI | CTCAG | 3 cut(s) | 514, 767, 1273 |
| BspEI | TCCGGA | 1 cut(s) | 781 |
| BspFNI | CGCG | 1 cut(s) | 241 |
| BspLI | GGNNCC | 1 cut(s) | 1090 |
| BspMI | ACCTGC | 1 cut(s) | 548 |
| BspPI | GGATC | 2 cut(s) | 129, 1670 |
| BsrDI | GCAATG | 1 cut(s) | 40 |
| BsrI | ACTGG | 1 cut(s) | 839 |
| BssECI | CCNNGG | 3 cut(s) | 1092, 1546, 1662 |
| BssMI | GATC | 3 cut(s) | 134, 1069, 1675 |
| BssNI | GRCGYC | 1 cut(s) | 468 |
| BssT1I | CCWWGG | 2 cut(s) | 1092, 1662 |
| Bst4CI | ACNGT | 6 cut(s) | 316, 710, 1010, 1031, 1136, 1672 |
| Bst6I | CTCTTC | 2 cut(s) | 101, 755 |
| BstACI | GRCGYC | 1 cut(s) | 468 |
| BstC8I | GCNNGC | 2 cut(s) | 555, 674 |
| BstDEI | CTNAG | 4 cut(s) | 522, 647, 754, 1281 |
| BstDSI | CCRYGG | 1 cut(s) | 1092 |
| BstF5I | GGATG | 6 cut(s) | 211, 580, 674, 790, 942, 1027 |
| BstFNI | CGCG | 1 cut(s) | 241 |
| BstKTI | GATC | 3 cut(s) | 137, 1072, 1678 |
| BstMAI | GTCTC | 2 cut(s) | 716, 1562 |
| BstMBI | GATC | 3 cut(s) | 134, 1069, 1675 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 238, 247 |
| BstSFI | CTRYAG | 1 cut(s) | 1371 |
| BstUI | CGCG | 1 cut(s) | 241 |
| BstV1I | GCAGC | 4 cut(s) | 57, 60, 514, 619 |
| BstV2I | GAAGAC | 3 cut(s) | 449, 463, 1372 |
| BstX2I | RGATCY | 1 cut(s) | 1675 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 958 |
| BstYI | RGATCY | 1 cut(s) | 1675 |
| Bsu36I | CCTNAGG | 1 cut(s) | 522 |
| BsuI | GTATCC | 3 cut(s) | 715, 1124, 1660 |
| BsuRI | GGCC | 3 cut(s) | 1160, 1299, 1461 |
| BtgI | CCRYGG | 1 cut(s) | 1092 |
| BtsCI | GGATG | 6 cut(s) | 211, 580, 674, 790, 942, 1027 |
| BtsIMutI | CAGTG | 2 cut(s) | 832, 910 |
| BveI | ACCTGC | 1 cut(s) | 548 |
| Cac8I | GCNNGC | 2 cut(s) | 555, 674 |
| CaiI | CAGNNNCTG | 1 cut(s) | 714 |
| CseI | GACGC | 1 cut(s) | 230 |
| Csp6I | GTAC | 2 cut(s) | 1527, 1682 |
| CviAII | CATG | 5 cut(s) | 613, 967, 1093, 1232, 1692 |
| CviQI | GTAC | 2 cut(s) | 1527, 1682 |
| DdeI | CTNAG | 4 cut(s) | 522, 647, 754, 1281 |
| DpnI | GATC | 3 cut(s) | 136, 1071, 1677 |
| DpnII | GATC | 3 cut(s) | 134, 1069, 1675 |
| EaeI | YGGCCR | 1 cut(s) | 1297 |
| Eam1104I | CTCTTC | 2 cut(s) | 101, 755 |
| EarI | CTCTTC | 2 cut(s) | 101, 755 |
| Eco130I | CCWWGG | 2 cut(s) | 1092, 1662 |
| Eco147I | AGGCCT | 1 cut(s) | 1461 |
| Eco24I | GRGCYC | 1 cut(s) | 1091 |
| Eco57I | CTGAAG | 2 cut(s) | 26, 886 |
| Eco81I | CCTNAGG | 1 cut(s) | 522 |
| EcoT14I | CCWWGG | 2 cut(s) | 1092, 1662 |
| EcoT22I | ATGCAT | 1 cut(s) | 1630 |
| EcoT38I | GRGCYC | 1 cut(s) | 1091 |
| ErhI | CCWWGG | 2 cut(s) | 1092, 1662 |
| FaeI | CATG | 5 cut(s) | 616, 970, 1096, 1235, 1695 |
| FaqI | GGGAC | 1 cut(s) | 503 |
| FatI | CATG | 5 cut(s) | 612, 966, 1092, 1231, 1691 |
| FauNDI | CATATG | 1 cut(s) | 411 |
| Fnu4HI | GCNGC | 4 cut(s) | 46, 49, 528, 633 |
| FokI | GGATG | 6 cut(s) | 218, 587, 681, 797, 949, 1034 |
| FriOI | GRGCYC | 1 cut(s) | 1091 |
| Fsp4HI | GCNGC | 4 cut(s) | 46, 49, 528, 633 |
| FspBI | CTAG | 1 cut(s) | 768 |
| GluI | GCNGC | 4 cut(s) | 46, 49, 528, 633 |
| GsaI | CCCAGC | 1 cut(s) | 1356 |
| GsuI | CTGGAG | 1 cut(s) | 1500 |
| HaeIII | GGCC | 3 cut(s) | 1160, 1299, 1461 |
| HapII | CCGG | 2 cut(s) | 572, 782 |
| HgaI | GACGC | 1 cut(s) | 230 |
| Hin1I | GRCGYC | 1 cut(s) | 468 |
| Hin1II | CATG | 5 cut(s) | 616, 970, 1096, 1235, 1695 |
| HincII | GTYRAC | 1 cut(s) | 964 |
| HindII | GTYRAC | 1 cut(s) | 964 |
| HinfI | GANTC | 8 cut(s) | 183, 283, 406, 637, 808, 973, 1438, 1703 |
| HpaII | CCGG | 2 cut(s) | 572, 782 |
| HphI | GGTGA | 6 cut(s) | 466, 472, 532, 580, 880, 889 |
| Hpy166II | GTNNAC | 4 cut(s) | 582, 964, 1422, 1488 |
| Hpy188I | TCNGA | 7 cut(s) | 176, 351, 757, 1107, 1282, 1547, 1712 |
| Hpy8I | GTNNAC | 4 cut(s) | 582, 964, 1422, 1488 |
| HpyAV | CCTTC | 6 cut(s) | 208, 487, 910, 926, 1331, 1492 |
| HpyCH4III | ACNGT | 6 cut(s) | 316, 710, 1010, 1031, 1136, 1672 |
| HpyCH4IV | ACGT | 2 cut(s) | 468, 1424 |
| HpyCH4V | TGCA | 9 cut(s) | 45, 530, 553, 612, 717, 822, 1288, 1347, 1628 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 238, 247 |
| HpyF3I | CTNAG | 4 cut(s) | 522, 647, 754, 1281 |
| HpySE526I | ACGT | 2 cut(s) | 468, 1424 |
| Hsp92I | GRCGYC | 1 cut(s) | 468 |
| Hsp92II | CATG | 5 cut(s) | 616, 970, 1096, 1235, 1695 |
| Kpn2I | TCCGGA | 1 cut(s) | 781 |
| Kzo9I | GATC | 3 cut(s) | 134, 1069, 1675 |
| LmnI | GCTCC | 3 cut(s) | 784, 1094, 1192 |
| Lsp1109I | GCAGC | 4 cut(s) | 57, 60, 514, 619 |
| LweI | GCATC | 6 cut(s) | 196, 659, 1275, 1411, 1615, 1637 |
| MaeI | CTAG | 1 cut(s) | 768 |
| MaeII | ACGT | 2 cut(s) | 468, 1424 |
| MaeIII | GTNAC | 5 cut(s) | 642, 790, 830, 895, 1025 |
| MalI | GATC | 3 cut(s) | 136, 1071, 1677 |
| MboI | GATC | 3 cut(s) | 134, 1069, 1675 |
| MflI | RGATCY | 1 cut(s) | 1675 |
| MhlI | GDGCHC | 1 cut(s) | 1091 |
| MlsI | TGGCCA | 1 cut(s) | 1299 |
| MluCI | AATT | 8 cut(s) | 440, 449, 534, 597, 729, 984, 1481, 1539 |
| MluNI | TGGCCA | 1 cut(s) | 1299 |
| MlyI | GAGTC | 1 cut(s) | 277 |
| MmeI | TCCRAC | 1 cut(s) | 329 |
| Mox20I | TGGCCA | 1 cut(s) | 1299 |
| Mph1103I | ATGCAT | 1 cut(s) | 1630 |
| MroI | TCCGGA | 1 cut(s) | 781 |
| MroXI | GAANNNNTTC | 4 cut(s) | 218, 231, 749, 1590 |
| MscI | TGGCCA | 1 cut(s) | 1299 |
| MseI | TTAA | 6 cut(s) | 375, 600, 1098, 1218, 1466, 1698 |
| MslI | CAYNNNNRTG | 1 cut(s) | 545 |
| Msp20I | TGGCCA | 1 cut(s) | 1299 |
| MspI | CCGG | 2 cut(s) | 572, 782 |
| MvnI | CGCG | 1 cut(s) | 241 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 238, 247 |
| NcoI | CCATGG | 1 cut(s) | 1092 |
| NdeI | CATATG | 1 cut(s) | 411 |
| NdeII | GATC | 3 cut(s) | 134, 1069, 1675 |
| NlaIII | CATG | 5 cut(s) | 616, 970, 1096, 1235, 1695 |
| NlaIV | GGNNCC | 1 cut(s) | 1090 |
| NmuCI | GTSAC | 2 cut(s) | 830, 895 |
| NsiI | ATGCAT | 1 cut(s) | 1630 |
| PceI | AGGCCT | 1 cut(s) | 1461 |
| PdmI | GAANNNNTTC | 4 cut(s) | 218, 231, 749, 1590 |
| PfeI | GAWTC | 7 cut(s) | 183, 406, 637, 808, 973, 1438, 1703 |
| PkrI | GCNGC | 4 cut(s) | 47, 50, 529, 634 |
| PleI | GAGTC | 1 cut(s) | 277 |
| PpsI | GAGTC | 1 cut(s) | 277 |
| PspFI | CCCAGC | 1 cut(s) | 1352 |
| PspN4I | GGNNCC | 1 cut(s) | 1090 |
| PstNI | CAGNNNCTG | 1 cut(s) | 714 |
| PsuI | RGATCY | 1 cut(s) | 1675 |
| RsaI | GTAC | 2 cut(s) | 1528, 1683 |
| RsaNI | GTAC | 2 cut(s) | 1527, 1682 |
| RseI | CAYNNNNRTG | 1 cut(s) | 545 |
| SaqAI | TTAA | 6 cut(s) | 375, 600, 1098, 1218, 1466, 1698 |
| SatI | GCNGC | 4 cut(s) | 46, 49, 528, 633 |
| Sau3AI | GATC | 3 cut(s) | 134, 1069, 1675 |
| SchI | GAGTC | 1 cut(s) | 277 |
| SduI | GDGCHC | 1 cut(s) | 1091 |
| SfaNI | GCATC | 6 cut(s) | 196, 659, 1275, 1411, 1615, 1637 |
| SfcI | CTRYAG | 1 cut(s) | 1371 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 545 |
| Sse9I | AATT | 8 cut(s) | 440, 449, 534, 597, 729, 984, 1481, 1539 |
| SseBI | AGGCCT | 1 cut(s) | 1461 |
| SsiI | CCGC | 1 cut(s) | 1620 |
| SspMI | CTAG | 1 cut(s) | 768 |
| StuI | AGGCCT | 1 cut(s) | 1461 |
| StyI | CCWWGG | 2 cut(s) | 1092, 1662 |
| TaaI | ACNGT | 6 cut(s) | 316, 710, 1010, 1031, 1136, 1672 |
| TaiI | ACGT | 2 cut(s) | 471, 1427 |
| TaqI | TCGA | 1 cut(s) | 133 |
| TasI | AATT | 8 cut(s) | 440, 449, 534, 597, 729, 984, 1481, 1539 |
| TatI | WGTACW | 1 cut(s) | 1681 |
| TfiI | GAWTC | 7 cut(s) | 183, 406, 637, 808, 973, 1438, 1703 |
| Tru1I | TTAA | 6 cut(s) | 375, 600, 1098, 1218, 1466, 1698 |
| Tru9I | TTAA | 6 cut(s) | 375, 600, 1098, 1218, 1466, 1698 |
| TscAI | CASTG | 2 cut(s) | 839, 910 |
| TseFI | GTSAC | 2 cut(s) | 830, 895 |
| TseI | GCWGC | 4 cut(s) | 45, 48, 527, 632 |
| Tsp45I | GTSAC | 2 cut(s) | 830, 895 |
| TspDTI | ATGAA | 6 cut(s) | 116, 240, 750, 876, 1220, 1511 |
| TspGWI | ACGGA | 2 cut(s) | 1143, 1598 |
| TspRI | CASTG | 2 cut(s) | 839, 910 |
| XapI | RAATTY | 1 cut(s) | 534 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 112 |
| XmnI | GAANNNNTTC | 4 cut(s) | 218, 231, 749, 1590 |
| XspI | CTAG | 1 cut(s) | 768 |
| ZraI | GACGTC | 1 cut(s) | 469 |
| Zsp2I | ATGCAT | 1 cut(s) | 1630 |