pentatricopeptide repeat-containing protein At1g12700, mitochondrial
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_2 | PF13041 | 70 - 115 | 4.6e-08 | PPR repeat family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 67, 71 |
| AcoI | YGGCCR | 1 cut(s) | 68 |
| AcsI | RAATTY | 1 cut(s) | 405 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 63, 103 |
| AgsI | TTSAA | 5 cut(s) | 135, 172, 194, 362, 404 |
| AluBI | AGCT | 1 cut(s) | 112 |
| AluI | AGCT | 1 cut(s) | 112 |
| Alw26I | GTCTC | 1 cut(s) | 117 |
| AoxI | GGCC | 1 cut(s) | 68 |
| ApeKI | GCWGC | 1 cut(s) | 100 |
| ApoI | RAATTY | 1 cut(s) | 405 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 223, 255 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 176, 189 |
| AsuC2I | CCSGG | 2 cut(s) | 97, 105 |
| BbvI | GCAGC | 1 cut(s) | 112 |
| BcnI | CCSGG | 2 cut(s) | 97, 105 |
| BcoDI | GTCTC | 1 cut(s) | 117 |
| BfaI | CTAG | 1 cut(s) | 27 |
| BisI | GCNGC | 3 cut(s) | 68, 71, 101 |
| BlsI | GCNGC | 3 cut(s) | 69, 72, 102 |
| Bme1390I | CCNGG | 2 cut(s) | 97, 105 |
| BmrFI | CCNGG | 2 cut(s) | 97, 105 |
| BmsI | GCATC | 2 cut(s) | 154, 208 |
| BpuEI | CTTGAG | 1 cut(s) | 143 |
| BpuMI | CCSGG | 2 cut(s) | 97, 105 |
| BsaI | GGTCTC | 1 cut(s) | 117 |
| BsaJI | CCNNGG | 1 cut(s) | 104 |
| BsaWI | WCCGGW | 1 cut(s) | 56 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 63, 103 |
| BseDI | CCNNGG | 1 cut(s) | 104 |
| BseGI | GGATG | 2 cut(s) | 169, 199 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 63, 103 |
| BseRI | GAGGAG | 1 cut(s) | 316 |
| BseX3I | CGGCCG | 1 cut(s) | 68 |
| BseXI | GCAGC | 1 cut(s) | 112 |
| Bsh1285I | CGRYCG | 1 cut(s) | 71 |
| BshFI | GGCC | 1 cut(s) | 70 |
| BsiEI | CGRYCG | 1 cut(s) | 71 |
| BsiSI | CCGG | 4 cut(s) | 57, 64, 97, 104 |
| BslFI | GGGAC | 1 cut(s) | 406 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 63, 103 |
| BsmAI | GTCTC | 1 cut(s) | 117 |
| BsmFI | GGGAC | 1 cut(s) | 406 |
| BsnI | GGCC | 1 cut(s) | 70 |
| Bso31I | GGTCTC | 1 cut(s) | 117 |
| BspACI | CCGC | 2 cut(s) | 67, 71 |
| BspANI | GGCC | 1 cut(s) | 70 |
| BspTNI | GGTCTC | 1 cut(s) | 117 |
| BssECI | CCNNGG | 1 cut(s) | 104 |
| Bst6I | CTCTTC | 1 cut(s) | 210 |
| BstF5I | GGATG | 2 cut(s) | 169, 199 |
| BstMAI | GTCTC | 1 cut(s) | 117 |
| BstMCI | CGRYCG | 1 cut(s) | 71 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 109, 196 |
| BstSCI | CCNGG | 2 cut(s) | 95, 103 |
| BstV1I | GCAGC | 1 cut(s) | 112 |
| BstZI | CGGCCG | 1 cut(s) | 68 |
| BsuRI | GGCC | 1 cut(s) | 70 |
| BtsCI | GGATG | 2 cut(s) | 169, 199 |
| CciNI | GCGGCCGC | 1 cut(s) | 68 |
| CviJI | RGCY | 5 cut(s) | 70, 103, 112, 139, 272 |
| CviKI_1 | RGCY | 5 cut(s) | 70, 103, 112, 139, 272 |
| EaeI | YGGCCR | 1 cut(s) | 68 |
| EagI | CGGCCG | 1 cut(s) | 68 |
| Eam1104I | CTCTTC | 1 cut(s) | 210 |
| EarI | CTCTTC | 1 cut(s) | 210 |
| EclXI | CGGCCG | 1 cut(s) | 68 |
| Eco31I | GGTCTC | 1 cut(s) | 117 |
| Eco52I | CGGCCG | 1 cut(s) | 68 |
| FaiI | YATR | 2 cut(s) | 275, 324 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 152, 184 |
| FaqI | GGGAC | 1 cut(s) | 406 |
| Fnu4HI | GCNGC | 3 cut(s) | 68, 71, 101 |
| FokI | GGATG | 2 cut(s) | 176, 186 |
| Fsp4HI | GCNGC | 3 cut(s) | 68, 71, 101 |
| FspBI | CTAG | 1 cut(s) | 27 |
| GluI | GCNGC | 3 cut(s) | 68, 71, 101 |
| HaeIII | GGCC | 1 cut(s) | 70 |
| HapII | CCGG | 4 cut(s) | 57, 64, 97, 104 |
| HincII | GTYRAC | 1 cut(s) | 242 |
| HindII | GTYRAC | 1 cut(s) | 242 |
| HindIII | AAGCTT | 1 cut(s) | 110 |
| HinfI | GANTC | 1 cut(s) | 60 |
| HpaII | CCGG | 4 cut(s) | 57, 64, 97, 104 |
| Hpy166II | GTNNAC | 2 cut(s) | 54, 242 |
| Hpy188I | TCNGA | 2 cut(s) | 41, 268 |
| Hpy188III | TCNNGA | 2 cut(s) | 314, 414 |
| Hpy8I | GTNNAC | 2 cut(s) | 54, 242 |
| HpyAV | CCTTC | 3 cut(s) | 141, 166, 219 |
| HpyCH4V | TGCA | 1 cut(s) | 283 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 109, 196 |
| LpnPI | CCDG | 5 cut(s) | 70, 77, 110, 117, 327 |
| Lsp1109I | GCAGC | 1 cut(s) | 112 |
| LweI | GCATC | 2 cut(s) | 154, 208 |
| MaeI | CTAG | 1 cut(s) | 27 |
| MaeIII | GTNAC | 2 cut(s) | 148, 354 |
| MboII | GAAGA | 2 cut(s) | 197, 392 |
| MluCI | AATT | 2 cut(s) | 396, 405 |
| MnlI | CCTC | 3 cut(s) | 25, 213, 294 |
| MroXI | GAANNNNTTC | 2 cut(s) | 176, 189 |
| MspI | CCGG | 4 cut(s) | 57, 64, 97, 104 |
| MspR9I | CCNGG | 2 cut(s) | 97, 105 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 109, 196 |
| NciI | CCSGG | 2 cut(s) | 97, 105 |
| NmuCI | GTSAC | 2 cut(s) | 148, 354 |
| NotI | GCGGCCGC | 1 cut(s) | 68 |
| PdmI | GAANNNNTTC | 2 cut(s) | 176, 189 |
| PfeI | GAWTC | 1 cut(s) | 60 |
| PkrI | GCNGC | 3 cut(s) | 69, 72, 102 |
| SatI | GCNGC | 3 cut(s) | 68, 71, 101 |
| ScrFI | CCNGG | 2 cut(s) | 97, 105 |
| SetI | ASST | 5 cut(s) | 24, 36, 114, 133, 177 |
| SfaNI | GCATC | 2 cut(s) | 154, 208 |
| SmlI | CTYRAG | 1 cut(s) | 158 |
| SmoI | CTYRAG | 1 cut(s) | 158 |
| Sse9I | AATT | 2 cut(s) | 396, 405 |
| SsiI | CCGC | 2 cut(s) | 67, 71 |
| SspI | AATATT | 1 cut(s) | 234 |
| SspMI | CTAG | 1 cut(s) | 27 |
| StyD4I | CCNGG | 2 cut(s) | 95, 103 |
| TaqI | TCGA | 1 cut(s) | 180 |
| TaqII | GACCGA | 1 cut(s) | 366 |
| TasI | AATT | 2 cut(s) | 396, 405 |
| TauI | GCSGC | 2 cut(s) | 70, 73 |
| TfiI | GAWTC | 1 cut(s) | 60 |
| TseFI | GTSAC | 2 cut(s) | 148, 354 |
| TseI | GCWGC | 1 cut(s) | 100 |
| Tsp45I | GTSAC | 2 cut(s) | 148, 354 |
| TspDTI | ATGAA | 2 cut(s) | 198, 269 |
| TspGWI | ACGGA | 1 cut(s) | 209 |
| XapI | RAATTY | 1 cut(s) | 405 |
| XmnI | GAANNNNTTC | 2 cut(s) | 176, 189 |
| XspI | CTAG | 1 cut(s) | 27 |