Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1158, 1263 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 279 |
| AatII | GACGTC | 1 cut(s) | 411 |
| Acc36I | ACCTGC | 1 cut(s) | 488 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 898 |
| AccII | CGCG | 1 cut(s) | 184 |
| AccIII | TCCGGA | 1 cut(s) | 721 |
| AclI | AACGTT | 1 cut(s) | 791 |
| AclWI | GGATC | 1 cut(s) | 1715 |
| AcoI | YGGCCR | 1 cut(s) | 1237 |
| AcsI | RAATTY | 2 cut(s) | 474, 1926 |
| AcuI | CTGAAG | 1 cut(s) | 1542 |
| AcyI | GRCGYC | 1 cut(s) | 408 |
| AfaI | GTAC | 2 cut(s) | 1573, 1846 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 898 |
| AluBI | AGCT | 8 cut(s) | 106, 572, 785, 1135, 1310, 1397, 1520, 1888 |
| AluI | AGCT | 8 cut(s) | 106, 572, 785, 1135, 1310, 1397, 1520, 1888 |
| Alw26I | GTCTC | 5 cut(s) | 88, 463, 656, 899, 1607 |
| AlwI | GGATC | 1 cut(s) | 1715 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 654 |
| Aor13HI | TCCGGA | 1 cut(s) | 721 |
| AoxI | GGCC | 4 cut(s) | 1098, 1237, 1279, 1504 |
| ApeKI | GCWGC | 5 cut(s) | 467, 490, 572, 1338, 1728 |
| ApoI | RAATTY | 2 cut(s) | 474, 1926 |
| AseI | ATTAAT | 1 cut(s) | 327 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 161, 689 |
| AspLEI | GCGC | 1 cut(s) | 379 |
| AsuHPI | GGTGA | 8 cut(s) | 127, 406, 412, 472, 520, 820, 1526, 1951 |
| AsuII | TTCGAA | 2 cut(s) | 7, 1255 |
| BaeGI | GKGCMC | 1 cut(s) | 129 |
| BalI | TGGCCA | 1 cut(s) | 1239 |
| BanII | GRGCYC | 1 cut(s) | 1031 |
| BbsI | GAAGAC | 3 cut(s) | 23, 389, 403 |
| BbvI | GCAGC | 5 cut(s) | 454, 477, 559, 1350, 1715 |
| BccI | CCATC | 8 cut(s) | 271, 589, 647, 871, 1166, 1271, 1559, 1867 |
| BceAI | ACGGC | 1 cut(s) | 451 |
| BciVI | GTATCC | 3 cut(s) | 655, 1064, 1705 |
| BcoDI | GTCTC | 5 cut(s) | 88, 463, 656, 899, 1607 |
| BfaI | CTAG | 3 cut(s) | 107, 1313, 1352 |
| BfmI | CTRYAG | 3 cut(s) | 491, 1665, 1966 |
| BfuAI | ACCTGC | 1 cut(s) | 488 |
| BfuI | GTATCC | 3 cut(s) | 655, 1064, 1705 |
| BglII | AGATCT | 2 cut(s) | 216, 1420 |
| BisI | GCNGC | 5 cut(s) | 468, 491, 573, 1339, 1729 |
| BlsI | GCNGC | 5 cut(s) | 469, 492, 574, 1340, 1730 |
| BmiI | GGNNCC | 1 cut(s) | 1030 |
| BmsI | GCATC | 7 cut(s) | 139, 599, 1192, 1456, 1660, 1682, 1815 |
| BpiI | GAAGAC | 3 cut(s) | 23, 389, 403 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1872, 1904 |
| BpmI | CTGGAG | 1 cut(s) | 1545 |
| Bpu14I | TTCGAA | 2 cut(s) | 7, 1255 |
| BpuEI | CTTGAG | 1 cut(s) | 164 |
| Bsa29I | ATCGAT | 1 cut(s) | 1092 |
| BsaHI | GRCGYC | 1 cut(s) | 408 |
| BsaJI | CCNNGG | 1 cut(s) | 1591 |
| BsaWI | WCCGGW | 1 cut(s) | 721 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 898 |
| Bse1I | ACTGG | 1 cut(s) | 772 |
| Bse3DI | GCAATG | 2 cut(s) | 687, 1976 |
| BseAI | TCCGGA | 1 cut(s) | 721 |
| BseCI | ATCGAT | 1 cut(s) | 1092 |
| BseDI | CCNNGG | 1 cut(s) | 1591 |
| BseGI | GGATG | 6 cut(s) | 154, 614, 642, 730, 882, 1873 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 898 |
| BseMI | GCAATG | 2 cut(s) | 687, 1976 |
| BseMII | CTCAG | 5 cut(s) | 135, 227, 601, 708, 1759 |
| BseNI | ACTGG | 1 cut(s) | 772 |
| BseRI | GAGGAG | 2 cut(s) | 993, 1931 |
| BseSI | GKGCMC | 1 cut(s) | 129 |
| BseXI | GCAGC | 5 cut(s) | 454, 477, 559, 1350, 1715 |
| BseYI | CCCAGC | 2 cut(s) | 102, 1397 |
| BsgI | GTGCAG | 3 cut(s) | 453, 1667, 1714 |
| Bsh1236I | CGCG | 1 cut(s) | 184 |
| BshFI | GGCC | 4 cut(s) | 1100, 1239, 1281, 1506 |
| BshVI | ATCGAT | 1 cut(s) | 1092 |
| BsiSI | CCGG | 1 cut(s) | 722 |
| BslFI | GGGAC | 1 cut(s) | 1644 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 898 |
| BsmAI | GTCTC | 5 cut(s) | 88, 463, 656, 899, 1607 |
| BsmBI | CGTCTC | 1 cut(s) | 899 |
| BsmFI | GGGAC | 1 cut(s) | 1644 |
| BsnI | GGCC | 4 cut(s) | 1100, 1239, 1281, 1506 |
| Bsp119I | TTCGAA | 2 cut(s) | 7, 1255 |
| Bsp1286I | GDGCHC | 2 cut(s) | 129, 1031 |
| Bsp13I | TCCGGA | 1 cut(s) | 721 |
| Bsp143I | GATC | 7 cut(s) | 166, 216, 285, 1009, 1089, 1420, 1720 |
| BspANI | GGCC | 4 cut(s) | 1100, 1239, 1281, 1506 |
| BspCNI | CTCAG | 5 cut(s) | 134, 226, 600, 707, 1758 |
| BspDI | ATCGAT | 1 cut(s) | 1092 |
| BspEI | TCCGGA | 1 cut(s) | 721 |
| BspFNI | CGCG | 1 cut(s) | 184 |
| BspLI | GGNNCC | 1 cut(s) | 1030 |
| BspMAI | CTGCAG | 3 cut(s) | 495, 1669, 1970 |
| BspMI | ACCTGC | 1 cut(s) | 488 |
| BspPI | GGATC | 1 cut(s) | 1715 |
| BspT104I | TTCGAA | 2 cut(s) | 7, 1255 |
| BsrDI | GCAATG | 2 cut(s) | 687, 1976 |
| BsrI | ACTGG | 1 cut(s) | 772 |
| BssECI | CCNNGG | 1 cut(s) | 1591 |
| BssMI | GATC | 7 cut(s) | 166, 216, 285, 1009, 1089, 1420, 1720 |
| BssNI | GRCGYC | 1 cut(s) | 408 |
| Bst6I | CTCTTC | 3 cut(s) | 695, 1430, 1908 |
| BstACI | GRCGYC | 1 cut(s) | 408 |
| BstBI | TTCGAA | 2 cut(s) | 7, 1255 |
| BstC8I | GCNNGC | 3 cut(s) | 495, 614, 1189 |
| BstDEI | CTNAG | 8 cut(s) | 121, 213, 462, 507, 587, 694, 1322, 1745 |
| BstF5I | GGATG | 6 cut(s) | 154, 614, 642, 730, 882, 1873 |
| BstFNI | CGCG | 1 cut(s) | 184 |
| BstHHI | GCGC | 1 cut(s) | 379 |
| BstKTI | GATC | 7 cut(s) | 169, 219, 288, 1012, 1092, 1423, 1723 |
| BstMAI | GTCTC | 5 cut(s) | 88, 463, 656, 899, 1607 |
| BstMBI | GATC | 7 cut(s) | 166, 216, 285, 1009, 1089, 1420, 1720 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 181, 190, 768, 1737 |
| BstSFI | CTRYAG | 3 cut(s) | 491, 1665, 1966 |
| BstSLI | GKGCMC | 1 cut(s) | 129 |
| BstUI | CGCG | 1 cut(s) | 184 |
| BstV1I | GCAGC | 5 cut(s) | 454, 477, 559, 1350, 1715 |
| BstV2I | GAAGAC | 3 cut(s) | 23, 389, 403 |
| BstX2I | RGATCY | 3 cut(s) | 216, 1420, 1720 |
| BstYI | RGATCY | 3 cut(s) | 216, 1420, 1720 |
| Bsu15I | ATCGAT | 1 cut(s) | 1092 |
| BsuI | GTATCC | 3 cut(s) | 655, 1064, 1705 |
| BsuRI | GGCC | 4 cut(s) | 1100, 1239, 1281, 1506 |
| BsuTUI | ATCGAT | 1 cut(s) | 1092 |
| BtsCI | GGATG | 6 cut(s) | 154, 614, 642, 730, 882, 1873 |
| BtsIMutI | CAGTG | 2 cut(s) | 129, 779 |
| BveI | ACCTGC | 1 cut(s) | 488 |
| Cac8I | GCNNGC | 3 cut(s) | 495, 614, 1189 |
| CaiI | CAGNNNCTG | 1 cut(s) | 654 |
| CfoI | GCGC | 1 cut(s) | 379 |
| ClaI | ATCGAT | 1 cut(s) | 1092 |
| CseI | GACGC | 2 cut(s) | 173, 1970 |
| Csp6I | GTAC | 2 cut(s) | 1572, 1845 |
| CviAII | CATG | 4 cut(s) | 553, 1033, 1903, 1933 |
| CviQI | GTAC | 2 cut(s) | 1572, 1845 |
| DdeI | CTNAG | 8 cut(s) | 121, 213, 462, 507, 587, 694, 1322, 1745 |
| DpnI | GATC | 7 cut(s) | 168, 218, 287, 1011, 1091, 1422, 1722 |
| DpnII | GATC | 7 cut(s) | 166, 216, 285, 1009, 1089, 1420, 1720 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 279 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 279 |
| EaeI | YGGCCR | 1 cut(s) | 1237 |
| Eam1104I | CTCTTC | 3 cut(s) | 695, 1430, 1908 |
| EarI | CTCTTC | 3 cut(s) | 695, 1430, 1908 |
| Eco147I | AGGCCT | 1 cut(s) | 1506 |
| Eco24I | GRGCYC | 1 cut(s) | 1031 |
| Eco32I | GATATC | 2 cut(s) | 832, 925 |
| Eco57I | CTGAAG | 1 cut(s) | 1542 |
| EcoRV | GATATC | 2 cut(s) | 832, 925 |
| EcoT22I | ATGCAT | 1 cut(s) | 1675 |
| EcoT38I | GRGCYC | 1 cut(s) | 1031 |
| Esp3I | CGTCTC | 1 cut(s) | 899 |
| FaeI | CATG | 4 cut(s) | 556, 1036, 1906, 1936 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 36 |
| FaqI | GGGAC | 1 cut(s) | 1644 |
| FatI | CATG | 4 cut(s) | 552, 1032, 1902, 1932 |
| FauNDI | CATATG | 1 cut(s) | 171 |
| Fnu4HI | GCNGC | 5 cut(s) | 468, 491, 573, 1339, 1729 |
| FokI | GGATG | 6 cut(s) | 161, 621, 629, 737, 889, 1880 |
| FriOI | GRGCYC | 1 cut(s) | 1031 |
| Fsp4HI | GCNGC | 5 cut(s) | 468, 491, 573, 1339, 1729 |
| FspBI | CTAG | 3 cut(s) | 107, 1313, 1352 |
| GlaI | GCGC | 1 cut(s) | 378 |
| GluI | GCNGC | 5 cut(s) | 468, 491, 573, 1339, 1729 |
| GsaI | CCCAGC | 2 cut(s) | 106, 1401 |
| GsuI | CTGGAG | 1 cut(s) | 1545 |
| HaeIII | GGCC | 4 cut(s) | 1100, 1239, 1281, 1506 |
| HapII | CCGG | 1 cut(s) | 722 |
| HgaI | GACGC | 2 cut(s) | 173, 1970 |
| HhaI | GCGC | 1 cut(s) | 379 |
| Hin1I | GRCGYC | 1 cut(s) | 408 |
| Hin1II | CATG | 4 cut(s) | 556, 1036, 1906, 1936 |
| Hin6I | GCGC | 1 cut(s) | 377 |
| HinP1I | GCGC | 1 cut(s) | 377 |
| HincII | GTYRAC | 1 cut(s) | 227 |
| HindII | GTYRAC | 1 cut(s) | 227 |
| HpaII | CCGG | 1 cut(s) | 722 |
| HphI | GGTGA | 8 cut(s) | 127, 406, 412, 472, 520, 820, 1526, 1951 |
| Hpy166II | GTNNAC | 6 cut(s) | 227, 522, 1366, 1467, 1533, 1942 |
| Hpy8I | GTNNAC | 6 cut(s) | 227, 522, 1366, 1467, 1533, 1942 |
| HpyCH4IV | ACGT | 4 cut(s) | 408, 791, 1469, 2000 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 181, 190, 768, 1737 |
| HpyF3I | CTNAG | 8 cut(s) | 121, 213, 462, 507, 587, 694, 1322, 1745 |
| HpySE526I | ACGT | 4 cut(s) | 408, 791, 1469, 2000 |
| Hsp92I | GRCGYC | 1 cut(s) | 408 |
| Hsp92II | CATG | 4 cut(s) | 556, 1036, 1906, 1936 |
| HspAI | GCGC | 1 cut(s) | 377 |
| Kpn2I | TCCGGA | 1 cut(s) | 721 |
| Kzo9I | GATC | 7 cut(s) | 166, 216, 285, 1009, 1089, 1420, 1720 |
| LmnI | GCTCC | 4 cut(s) | 301, 724, 1034, 1132 |
| Lsp1109I | GCAGC | 5 cut(s) | 454, 477, 559, 1350, 1715 |
| LweI | GCATC | 7 cut(s) | 139, 599, 1192, 1456, 1660, 1682, 1815 |
| MaeI | CTAG | 3 cut(s) | 107, 1313, 1352 |
| MaeII | ACGT | 4 cut(s) | 408, 791, 1469, 2000 |
| MaeIII | GTNAC | 6 cut(s) | 133, 232, 730, 965, 1150, 1286 |
| MalI | GATC | 7 cut(s) | 168, 218, 287, 1011, 1091, 1422, 1722 |
| MboI | GATC | 7 cut(s) | 166, 216, 285, 1009, 1089, 1420, 1720 |
| MflI | RGATCY | 3 cut(s) | 216, 1420, 1720 |
| MhlI | GDGCHC | 2 cut(s) | 129, 1031 |
| MlsI | TGGCCA | 1 cut(s) | 1239 |
| MluNI | TGGCCA | 1 cut(s) | 1239 |
| MlyI | GAGTC | 2 cut(s) | 765, 820 |
| MmeI | TCCRAC | 1 cut(s) | 1326 |
| Mox20I | TGGCCA | 1 cut(s) | 1239 |
| Mph1103I | ATGCAT | 1 cut(s) | 1675 |
| MroI | TCCGGA | 1 cut(s) | 721 |
| MroXI | GAANNNNTTC | 2 cut(s) | 161, 689 |
| MscI | TGGCCA | 1 cut(s) | 1239 |
| MseI | TTAA | 3 cut(s) | 327, 1038, 1962 |
| MslI | CAYNNNNRTG | 3 cut(s) | 485, 1814, 1937 |
| Msp20I | TGGCCA | 1 cut(s) | 1239 |
| MspI | CCGG | 1 cut(s) | 722 |
| MvnI | CGCG | 1 cut(s) | 184 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 181, 190, 768, 1737 |
| NdeI | CATATG | 1 cut(s) | 171 |
| NdeII | GATC | 7 cut(s) | 166, 216, 285, 1009, 1089, 1420, 1720 |
| NlaIII | CATG | 4 cut(s) | 556, 1036, 1906, 1936 |
| NlaIV | GGNNCC | 1 cut(s) | 1030 |
| NmuCI | GTSAC | 2 cut(s) | 133, 232 |
| NsiI | ATGCAT | 1 cut(s) | 1675 |
| NspV | TTCGAA | 2 cut(s) | 7, 1255 |
| PceI | AGGCCT | 1 cut(s) | 1506 |
| PdmI | GAANNNNTTC | 2 cut(s) | 161, 689 |
| PfeI | GAWTC | 8 cut(s) | 4, 346, 748, 913, 1409, 1483, 1759, 1854 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 898 |
| PkrI | GCNGC | 5 cut(s) | 469, 492, 574, 1340, 1730 |
| PleI | GAGTC | 2 cut(s) | 764, 819 |
| PpsI | GAGTC | 2 cut(s) | 764, 819 |
| PshBI | ATTAAT | 1 cut(s) | 327 |
| PsiI | TTATAA | 2 cut(s) | 1158, 1263 |
| Psp1406I | AACGTT | 1 cut(s) | 791 |
| PspFI | CCCAGC | 2 cut(s) | 102, 1397 |
| PspN4I | GGNNCC | 1 cut(s) | 1030 |
| PstI | CTGCAG | 3 cut(s) | 495, 1669, 1970 |
| PstNI | CAGNNNCTG | 1 cut(s) | 654 |
| PsuI | RGATCY | 3 cut(s) | 216, 1420, 1720 |
| RsaI | GTAC | 2 cut(s) | 1573, 1846 |
| RsaNI | GTAC | 2 cut(s) | 1572, 1845 |
| RseI | CAYNNNNRTG | 3 cut(s) | 485, 1814, 1937 |
| SaqAI | TTAA | 3 cut(s) | 327, 1038, 1962 |
| SatI | GCNGC | 5 cut(s) | 468, 491, 573, 1339, 1729 |
| Sau3AI | GATC | 7 cut(s) | 166, 216, 285, 1009, 1089, 1420, 1720 |
| SchI | GAGTC | 2 cut(s) | 765, 820 |
| SduI | GDGCHC | 2 cut(s) | 129, 1031 |
| SfaNI | GCATC | 7 cut(s) | 139, 599, 1192, 1456, 1660, 1682, 1815 |
| SfcI | CTRYAG | 3 cut(s) | 491, 1665, 1966 |
| SfuI | TTCGAA | 2 cut(s) | 7, 1255 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 485, 1814, 1937 |
| SmlI | CTYRAG | 1 cut(s) | 143 |
| SmoI | CTYRAG | 1 cut(s) | 143 |
| SseBI | AGGCCT | 1 cut(s) | 1506 |
| SspI | AATATT | 2 cut(s) | 319, 1267 |
| SspMI | CTAG | 3 cut(s) | 107, 1313, 1352 |
| StuI | AGGCCT | 1 cut(s) | 1506 |
| TaiI | ACGT | 4 cut(s) | 411, 794, 1472, 2003 |
| TaqI | TCGA | 8 cut(s) | 7, 92, 115, 165, 927, 1092, 1255, 1706 |
| TatI | WGTACW | 1 cut(s) | 1844 |
| TfiI | GAWTC | 8 cut(s) | 4, 346, 748, 913, 1409, 1483, 1759, 1854 |
| Tru1I | TTAA | 3 cut(s) | 327, 1038, 1962 |
| Tru9I | TTAA | 3 cut(s) | 327, 1038, 1962 |
| TscAI | CASTG | 2 cut(s) | 129, 779 |
| TseFI | GTSAC | 2 cut(s) | 133, 232 |
| TseI | GCWGC | 5 cut(s) | 467, 490, 572, 1338, 1728 |
| Tsp45I | GTSAC | 2 cut(s) | 133, 232 |
| TspDTI | ATGAA | 6 cut(s) | 77, 690, 698, 816, 1556, 1965 |
| TspGWI | ACGGA | 1 cut(s) | 1083 |
| TspRI | CASTG | 2 cut(s) | 129, 779 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 898 |
| VspI | ATTAAT | 1 cut(s) | 327 |
| XapI | RAATTY | 2 cut(s) | 474, 1926 |
| XbaI | TCTAGA | 1 cut(s) | 1312 |
| XmnI | GAANNNNTTC | 2 cut(s) | 161, 689 |
| XspI | CTAG | 3 cut(s) | 107, 1313, 1352 |
| ZraI | GACGTC | 1 cut(s) | 409 |
| Zsp2I | ATGCAT | 1 cut(s) | 1675 |