Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 517 |
| AccBSI | CCGCTC | 1 cut(s) | 39 |
| AccII | CGCG | 6 cut(s) | 141, 446, 448, 450, 452, 935 |
| AccIII | TCCGGA | 1 cut(s) | 772 |
| AciI | CCGC | 9 cut(s) | 34, 37, 84, 139, 150, 198, 233, 623, 935 |
| AclWI | GGATC | 5 cut(s) | 87, 122, 135, 241, 393 |
| AcoI | YGGCCR | 2 cut(s) | 202, 402 |
| AcsI | RAATTY | 2 cut(s) | 63, 525 |
| AcuI | CTGAAG | 2 cut(s) | 348, 534 |
| AcyI | GRCGYC | 1 cut(s) | 185 |
| AfaI | GTAC | 1 cut(s) | 998 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 11, 200 |
| AgsI | TTSAA | 6 cut(s) | 465, 803, 862, 895, 956, 968 |
| AjnI | CCWGG | 1 cut(s) | 123 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 284, 316 |
| AluBI | AGCT | 1 cut(s) | 836 |
| AluI | AGCT | 1 cut(s) | 836 |
| Alw26I | GTCTC | 2 cut(s) | 323, 403 |
| AlwI | GGATC | 5 cut(s) | 87, 122, 135, 241, 393 |
| Ama87I | CYCGRG | 2 cut(s) | 281, 363 |
| Aor13HI | TCCGGA | 1 cut(s) | 772 |
| AoxI | GGCC | 4 cut(s) | 13, 202, 402, 820 |
| ApeKI | GCWGC | 2 cut(s) | 218, 518 |
| ApoI | RAATTY | 2 cut(s) | 63, 525 |
| AspLEI | GCGC | 4 cut(s) | 399, 448, 450, 452 |
| AspS9I | GGNCC | 2 cut(s) | 257, 311 |
| AsuC2I | CCSGG | 3 cut(s) | 364, 365, 406 |
| AvaI | CYCGRG | 2 cut(s) | 281, 363 |
| AvaII | GGWCC | 2 cut(s) | 257, 311 |
| BamHI | GGATCC | 1 cut(s) | 127 |
| BanII | GRGCYC | 1 cut(s) | 120 |
| BbsI | GAAGAC | 1 cut(s) | 336 |
| BbvI | GCAGC | 2 cut(s) | 205, 530 |
| BccI | CCATC | 4 cut(s) | 285, 387, 698, 922 |
| BceAI | ACGGC | 2 cut(s) | 28, 502 |
| BciT130I | CCWGG | 1 cut(s) | 125 |
| BciVI | GTATCC | 1 cut(s) | 706 |
| BcnI | CCSGG | 3 cut(s) | 364, 365, 406 |
| BcoDI | GTCTC | 2 cut(s) | 323, 403 |
| BfaI | CTAG | 1 cut(s) | 17 |
| BfmI | CTRYAG | 1 cut(s) | 380 |
| BfoI | RGCGCY | 1 cut(s) | 400 |
| BfuAI | ACCTGC | 1 cut(s) | 517 |
| BfuI | GTATCC | 1 cut(s) | 706 |
| BglII | AGATCT | 1 cut(s) | 269 |
| BisI | GCNGC | 5 cut(s) | 37, 139, 219, 519, 624 |
| BlsI | GCNGC | 5 cut(s) | 38, 140, 220, 520, 625 |
| Bme1390I | CCNGG | 4 cut(s) | 125, 364, 365, 406 |
| Bme18I | GGWCC | 2 cut(s) | 257, 311 |
| BmeT110I | CYCGRG | 2 cut(s) | 281, 363 |
| BmgT120I | GGNCC | 2 cut(s) | 257, 311 |
| BmiI | GGNNCC | 2 cut(s) | 129, 258 |
| BmrFI | CCNGG | 4 cut(s) | 125, 364, 365, 406 |
| BmsI | GCATC | 4 cut(s) | 161, 230, 650, 718 |
| BpiI | GAAGAC | 1 cut(s) | 336 |
| BpuMI | CCSGG | 3 cut(s) | 364, 365, 406 |
| BsaAI | YACGTR | 1 cut(s) | 996 |
| BsaHI | GRCGYC | 1 cut(s) | 185 |
| BsaJI | CCNNGG | 2 cut(s) | 10, 363 |
| BsaWI | WCCGGW | 1 cut(s) | 772 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 23, 53, 175, 205, 284, 314 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 11, 200 |
| Bse118I | RCCGGY | 1 cut(s) | 200 |
| Bse1I | ACTGG | 1 cut(s) | 823 |
| BseAI | TCCGGA | 1 cut(s) | 772 |
| BseBI | CCWGG | 1 cut(s) | 125 |
| BseDI | CCNNGG | 2 cut(s) | 10, 363 |
| BseGI | GGATG | 5 cut(s) | 152, 221, 571, 665, 933 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 11, 200 |
| BseMII | CTCAG | 3 cut(s) | 179, 417, 759 |
| BseNI | ACTGG | 1 cut(s) | 823 |
| BsePI | GCGCGC | 2 cut(s) | 446, 448 |
| BseRI | GAGGAG | 2 cut(s) | 292, 295 |
| BseX3I | CGGCCG | 1 cut(s) | 402 |
| BseXI | GCAGC | 2 cut(s) | 205, 530 |
| Bsh1236I | CGCG | 6 cut(s) | 141, 446, 448, 450, 452, 935 |
| Bsh1285I | CGRYCG | 2 cut(s) | 264, 405 |
| BshFI | GGCC | 4 cut(s) | 15, 204, 404, 822 |
| BsiEI | CGRYCG | 2 cut(s) | 264, 405 |
| BsiHKCI | CYCGRG | 2 cut(s) | 281, 363 |
| BsiSI | CCGG | 5 cut(s) | 201, 364, 405, 563, 773 |
| BslFI | GGGAC | 1 cut(s) | 270 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 11, 200 |
| BsmAI | GTCTC | 2 cut(s) | 323, 403 |
| BsmFI | GGGAC | 1 cut(s) | 270 |
| BsnI | GGCC | 4 cut(s) | 15, 204, 404, 822 |
| BsoBI | CYCGRG | 2 cut(s) | 281, 363 |
| Bsp1286I | GDGCHC | 1 cut(s) | 120 |
| Bsp13I | TCCGGA | 1 cut(s) | 772 |
| Bsp143I | GATC | 8 cut(s) | 92, 127, 168, 246, 261, 269, 285, 385 |
| BspACI | CCGC | 9 cut(s) | 34, 37, 84, 139, 150, 198, 233, 623, 935 |
| BspANI | GGCC | 4 cut(s) | 15, 204, 404, 822 |
| BspCNI | CTCAG | 3 cut(s) | 178, 418, 758 |
| BspEI | TCCGGA | 1 cut(s) | 772 |
| BspFNI | CGCG | 6 cut(s) | 141, 446, 448, 450, 452, 935 |
| BspLI | GGNNCC | 2 cut(s) | 129, 258 |
| BspMAI | CTGCAG | 1 cut(s) | 384 |
| BspMI | ACCTGC | 1 cut(s) | 517 |
| BspPI | GGATC | 5 cut(s) | 87, 122, 135, 241, 393 |
| BsrBI | CCGCTC | 1 cut(s) | 39 |
| BsrFI | RCCGGY | 1 cut(s) | 200 |
| BsrI | ACTGG | 1 cut(s) | 823 |
| BssAI | RCCGGY | 1 cut(s) | 200 |
| BssECI | CCNNGG | 2 cut(s) | 10, 363 |
| BssHII | GCGCGC | 2 cut(s) | 446, 448 |
| BssMI | GATC | 8 cut(s) | 92, 127, 168, 246, 261, 269, 285, 385 |
| BssNI | GRCGYC | 1 cut(s) | 185 |
| Bst2UI | CCWGG | 1 cut(s) | 125 |
| Bst4CI | ACNGT | 1 cut(s) | 1016 |
| Bst6I | CTCTTC | 1 cut(s) | 746 |
| BstACI | GRCGYC | 1 cut(s) | 185 |
| BstBAI | YACGTR | 1 cut(s) | 996 |
| BstC8I | GCNNGC | 4 cut(s) | 150, 202, 448, 450 |
| BstDEI | CTNAG | 4 cut(s) | 165, 426, 638, 745 |
| BstDSI | CCRYGG | 1 cut(s) | 10 |
| BstF5I | GGATG | 5 cut(s) | 152, 221, 571, 665, 933 |
| BstFNI | CGCG | 6 cut(s) | 141, 446, 448, 450, 452, 935 |
| BstH2I | RGCGCY | 1 cut(s) | 400 |
| BstHHI | GCGC | 4 cut(s) | 399, 448, 450, 452 |
| BstKTI | GATC | 8 cut(s) | 95, 130, 171, 249, 264, 272, 288, 388 |
| BstMAI | GTCTC | 2 cut(s) | 323, 403 |
| BstMBI | GATC | 8 cut(s) | 92, 127, 168, 246, 261, 269, 285, 385 |
| BstMCI | CGRYCG | 2 cut(s) | 264, 405 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 396, 518, 819 |
| BstNI | CCWGG | 1 cut(s) | 125 |
| BstSCI | CCNGG | 4 cut(s) | 123, 362, 363, 404 |
| BstSFI | CTRYAG | 1 cut(s) | 380 |
| BstSNI | TACGTA | 1 cut(s) | 996 |
| BstUI | CGCG | 6 cut(s) | 141, 446, 448, 450, 452, 935 |
| BstV1I | GCAGC | 2 cut(s) | 205, 530 |
| BstV2I | GAAGAC | 1 cut(s) | 336 |
| BstX2I | RGATCY | 3 cut(s) | 92, 127, 269 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 949 |
| BstYI | RGATCY | 3 cut(s) | 92, 127, 269 |
| BstZI | CGGCCG | 1 cut(s) | 402 |
| BsuI | GTATCC | 1 cut(s) | 706 |
| BsuRI | GGCC | 4 cut(s) | 15, 204, 404, 822 |
| BtgI | CCRYGG | 1 cut(s) | 10 |
| BtsCI | GGATG | 5 cut(s) | 152, 221, 571, 665, 933 |
| BtsI | GCAGTG | 1 cut(s) | 618 |
| BtsIMutI | CAGTG | 4 cut(s) | 467, 584, 618, 830 |
| BveI | ACCTGC | 1 cut(s) | 517 |
| Cac8I | GCNNGC | 4 cut(s) | 150, 202, 448, 450 |
| CfoI | GCGC | 4 cut(s) | 399, 448, 450, 452 |
| Cfr10I | RCCGGY | 1 cut(s) | 200 |
| Cfr13I | GGNCC | 2 cut(s) | 257, 311 |
| Cfr9I | CCCGGG | 1 cut(s) | 363 |
| CseI | GACGC | 2 cut(s) | 193, 441 |
| Csp6I | GTAC | 1 cut(s) | 997 |
| CviAII | CATG | 2 cut(s) | 604, 646 |
| CviQI | GTAC | 1 cut(s) | 997 |
| DdeI | CTNAG | 4 cut(s) | 165, 426, 638, 745 |
| DpnI | GATC | 8 cut(s) | 94, 129, 170, 248, 263, 271, 287, 387 |
| DpnII | GATC | 8 cut(s) | 92, 127, 168, 246, 261, 269, 285, 385 |
| EaeI | YGGCCR | 2 cut(s) | 202, 402 |
| EagI | CGGCCG | 1 cut(s) | 402 |
| Eam1104I | CTCTTC | 1 cut(s) | 746 |
| EarI | CTCTTC | 1 cut(s) | 746 |
| EclXI | CGGCCG | 1 cut(s) | 402 |
| Eco105I | TACGTA | 1 cut(s) | 996 |
| Eco24I | GRGCYC | 1 cut(s) | 120 |
| Eco47I | GGWCC | 2 cut(s) | 257, 311 |
| Eco52I | CGGCCG | 1 cut(s) | 402 |
| Eco57I | CTGAAG | 2 cut(s) | 348, 534 |
| Eco88I | CYCGRG | 2 cut(s) | 281, 363 |
| EcoRII | CCWGG | 1 cut(s) | 123 |
| EcoT38I | GRGCYC | 1 cut(s) | 120 |
| FaeI | CATG | 2 cut(s) | 607, 649 |
| FaqI | GGGAC | 1 cut(s) | 270 |
| FatI | CATG | 2 cut(s) | 603, 645 |
| FauI | CCCGC | 1 cut(s) | 157 |
| Fnu4HI | GCNGC | 5 cut(s) | 37, 139, 219, 519, 624 |
| FokI | GGATG | 5 cut(s) | 139, 208, 578, 672, 940 |
| FriOI | GRGCYC | 1 cut(s) | 120 |
| Fsp4HI | GCNGC | 5 cut(s) | 37, 139, 219, 519, 624 |
| FspBI | CTAG | 1 cut(s) | 17 |
| GlaI | GCGC | 4 cut(s) | 398, 447, 449, 451 |
| GluI | GCNGC | 5 cut(s) | 37, 139, 219, 519, 624 |
| HaeII | RGCGCY | 1 cut(s) | 400 |
| HaeIII | GGCC | 4 cut(s) | 15, 204, 404, 822 |
| HapII | CCGG | 5 cut(s) | 201, 364, 405, 563, 773 |
| HgaI | GACGC | 2 cut(s) | 193, 441 |
| HhaI | GCGC | 4 cut(s) | 399, 448, 450, 452 |
| Hin1I | GRCGYC | 1 cut(s) | 185 |
| Hin1II | CATG | 2 cut(s) | 607, 649 |
| Hin6I | GCGC | 4 cut(s) | 397, 446, 448, 450 |
| HinP1I | GCGC | 4 cut(s) | 397, 446, 448, 450 |
| HinfI | GANTC | 4 cut(s) | 316, 799, 964, 980 |
| HpaII | CCGG | 5 cut(s) | 201, 364, 405, 563, 773 |
| Hpy166II | GTNNAC | 1 cut(s) | 573 |
| Hpy188I | TCNGA | 8 cut(s) | 105, 168, 251, 371, 427, 748, 879, 985 |
| Hpy188III | TCNNGA | 9 cut(s) | 27, 96, 265, 281, 283, 289, 309, 497, 773 |
| Hpy8I | GTNNAC | 1 cut(s) | 573 |
| HpyAV | CCTTC | 4 cut(s) | 445, 471, 901, 917 |
| HpyCH4III | ACNGT | 1 cut(s) | 1016 |
| HpyCH4IV | ACGT | 2 cut(s) | 777, 995 |
| HpyCH4V | TGCA | 6 cut(s) | 221, 382, 603, 708, 731, 813 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 396, 518, 819 |
| HpyF3I | CTNAG | 4 cut(s) | 165, 426, 638, 745 |
| HpySE526I | ACGT | 2 cut(s) | 777, 995 |
| Hsp92I | GRCGYC | 1 cut(s) | 185 |
| Hsp92II | CATG | 2 cut(s) | 607, 649 |
| HspAI | GCGC | 4 cut(s) | 397, 446, 448, 450 |
| Kpn2I | TCCGGA | 1 cut(s) | 772 |
| KroI | GCCGGC | 1 cut(s) | 200 |
| KroNI | GCCGGC | 1 cut(s) | 202 |
| Kzo9I | GATC | 8 cut(s) | 92, 127, 168, 246, 261, 269, 285, 385 |
| LmnI | GCTCC | 2 cut(s) | 44, 775 |
| Lsp1109I | GCAGC | 2 cut(s) | 205, 530 |
| LweI | GCATC | 4 cut(s) | 161, 230, 650, 718 |
| MaeI | CTAG | 1 cut(s) | 17 |
| MaeII | ACGT | 2 cut(s) | 777, 995 |
| MaeIII | GTNAC | 3 cut(s) | 453, 633, 781 |
| MalI | GATC | 8 cut(s) | 94, 129, 170, 248, 263, 271, 287, 387 |
| MauBI | CGCGCGCG | 2 cut(s) | 446, 448 |
| MbiI | CCGCTC | 1 cut(s) | 39 |
| MboI | GATC | 8 cut(s) | 92, 127, 168, 246, 261, 269, 285, 385 |
| MboII | GAAGA | 3 cut(s) | 341, 662, 733 |
| MfeI | CAATTG | 1 cut(s) | 75 |
| MflI | RGATCY | 3 cut(s) | 92, 127, 269 |
| MhlI | GDGCHC | 1 cut(s) | 120 |
| MluCI | AATT | 8 cut(s) | 63, 75, 143, 525, 700, 732, 754, 814 |
| MlyI | GAGTC | 2 cut(s) | 325, 989 |
| MmeI | TCCRAC | 1 cut(s) | 349 |
| MroI | TCCGGA | 1 cut(s) | 772 |
| MroNI | GCCGGC | 1 cut(s) | 200 |
| MseI | TTAA | 2 cut(s) | 735, 1018 |
| MspI | CCGG | 5 cut(s) | 201, 364, 405, 563, 773 |
| MspR9I | CCNGG | 4 cut(s) | 125, 364, 365, 406 |
| MunI | CAATTG | 1 cut(s) | 75 |
| MvaI | CCWGG | 1 cut(s) | 125 |
| MvnI | CGCG | 6 cut(s) | 141, 446, 448, 450, 452, 935 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 396, 518, 819 |
| NaeI | GCCGGC | 1 cut(s) | 202 |
| NciI | CCSGG | 3 cut(s) | 364, 365, 406 |
| NdeII | GATC | 8 cut(s) | 92, 127, 168, 246, 261, 269, 285, 385 |
| NgoMIV | GCCGGC | 1 cut(s) | 200 |
| NlaIII | CATG | 2 cut(s) | 607, 649 |
| NlaIV | GGNNCC | 2 cut(s) | 129, 258 |
| NmeAIII | GCCGAG | 1 cut(s) | 380 |
| NmuCI | GTSAC | 1 cut(s) | 453 |
| PaeR7I | CTCGAG | 1 cut(s) | 281 |
| PauI | GCGCGC | 2 cut(s) | 446, 448 |
| PdiI | GCCGGC | 1 cut(s) | 202 |
| PfeI | GAWTC | 2 cut(s) | 799, 964 |
| PflFI | GACNNNGTC | 1 cut(s) | 315 |
| PkrI | GCNGC | 5 cut(s) | 38, 140, 220, 520, 625 |
| Ple19I | CGATCG | 1 cut(s) | 264 |
| PleI | GAGTC | 2 cut(s) | 324, 988 |
| PpsI | GAGTC | 2 cut(s) | 324, 988 |
| Ppu21I | YACGTR | 1 cut(s) | 996 |
| Psp6I | CCWGG | 1 cut(s) | 123 |
| PspGI | CCWGG | 1 cut(s) | 123 |
| PspN4I | GGNNCC | 2 cut(s) | 129, 258 |
| PspPI | GGNCC | 2 cut(s) | 257, 311 |
| PstI | CTGCAG | 1 cut(s) | 384 |
| PsuI | RGATCY | 3 cut(s) | 92, 127, 269 |
| PsyI | GACNNNGTC | 1 cut(s) | 315 |
| PteI | GCGCGC | 2 cut(s) | 446, 448 |
| PvuI | CGATCG | 1 cut(s) | 264 |
| RsaI | GTAC | 1 cut(s) | 998 |
| RsaNI | GTAC | 1 cut(s) | 997 |
| SaqAI | TTAA | 2 cut(s) | 735, 1018 |
| SatI | GCNGC | 5 cut(s) | 37, 139, 219, 519, 624 |
| Sau3AI | GATC | 8 cut(s) | 92, 127, 168, 246, 261, 269, 285, 385 |
| Sau96I | GGNCC | 2 cut(s) | 257, 311 |
| SchI | GAGTC | 2 cut(s) | 325, 989 |
| ScrFI | CCNGG | 4 cut(s) | 125, 364, 365, 406 |
| SduI | GDGCHC | 1 cut(s) | 120 |
| SfaNI | GCATC | 4 cut(s) | 161, 230, 650, 718 |
| SfcI | CTRYAG | 1 cut(s) | 380 |
| Sfr274I | CTCGAG | 1 cut(s) | 281 |
| SinI | GGWCC | 2 cut(s) | 257, 311 |
| SlaI | CTCGAG | 1 cut(s) | 281 |
| SmaI | CCCGGG | 1 cut(s) | 365 |
| SmlI | CTYRAG | 1 cut(s) | 281 |
| SmoI | CTYRAG | 1 cut(s) | 281 |
| SnaBI | TACGTA | 1 cut(s) | 996 |
| Sse9I | AATT | 8 cut(s) | 63, 75, 143, 525, 700, 732, 754, 814 |
| SsiI | CCGC | 9 cut(s) | 34, 37, 84, 139, 150, 198, 233, 623, 935 |
| SspMI | CTAG | 1 cut(s) | 17 |
| StyD4I | CCNGG | 4 cut(s) | 123, 362, 363, 404 |
| TaaI | ACNGT | 1 cut(s) | 1016 |
| TaiI | ACGT | 2 cut(s) | 780, 998 |
| TaqI | TCGA | 5 cut(s) | 264, 282, 498, 505, 906 |
| TaqII | GACCGA | 2 cut(s) | 274, 328 |
| TasI | AATT | 8 cut(s) | 63, 75, 143, 525, 700, 732, 754, 814 |
| TauI | GCSGC | 3 cut(s) | 39, 141, 626 |
| TfiI | GAWTC | 2 cut(s) | 799, 964 |
| Tru1I | TTAA | 2 cut(s) | 735, 1018 |
| Tru9I | TTAA | 2 cut(s) | 735, 1018 |
| TscAI | CASTG | 4 cut(s) | 474, 591, 625, 830 |
| TseFI | GTSAC | 1 cut(s) | 453 |
| TseI | GCWGC | 2 cut(s) | 218, 518 |
| Tsp45I | GTSAC | 1 cut(s) | 453 |
| TspDTI | ATGAA | 2 cut(s) | 767, 867 |
| TspMI | CCCGGG | 1 cut(s) | 363 |
| TspRI | CASTG | 4 cut(s) | 474, 591, 625, 830 |
| Tth111I | GACNNNGTC | 1 cut(s) | 315 |
| VpaK11BI | GGWCC | 2 cut(s) | 257, 311 |
| XapI | RAATTY | 2 cut(s) | 63, 525 |
| XhoI | CTCGAG | 1 cut(s) | 281 |
| XmaI | CCCGGG | 1 cut(s) | 363 |
| XspI | CTAG | 1 cut(s) | 17 |