Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 224, 449, 455, 482 |
| AcoI | YGGCCR | 1 cut(s) | 285 |
| AcsI | RAATTY | 2 cut(s) | 368, 462 |
| AcuI | CTGAAG | 1 cut(s) | 213 |
| AfaI | GTAC | 1 cut(s) | 343 |
| AgsI | TTSAA | 5 cut(s) | 212, 274, 376, 389, 469 |
| AhlI | ACTAGT | 1 cut(s) | 523 |
| AluBI | AGCT | 1 cut(s) | 596 |
| AluI | AGCT | 1 cut(s) | 596 |
| Alw21I | GWGCWC | 1 cut(s) | 598 |
| AoxI | GGCC | 1 cut(s) | 285 |
| ApeKI | GCWGC | 2 cut(s) | 142, 560 |
| ApoI | RAATTY | 2 cut(s) | 368, 462 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 241, 273, 321, 353 |
| AsuHPI | GGTGA | 2 cut(s) | 150, 400 |
| BanII | GRGCYC | 1 cut(s) | 598 |
| BbsI | GAAGAC | 1 cut(s) | 32 |
| Bbv12I | GWGCWC | 1 cut(s) | 598 |
| BbvI | GCAGC | 2 cut(s) | 154, 547 |
| BccI | CCATC | 2 cut(s) | 15, 577 |
| BceAI | ACGGC | 2 cut(s) | 272, 439 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 65, 99 |
| BcuI | ACTAGT | 1 cut(s) | 523 |
| BfaI | CTAG | 3 cut(s) | 137, 524, 611 |
| BisI | GCNGC | 3 cut(s) | 143, 456, 561 |
| BlsI | GCNGC | 3 cut(s) | 144, 457, 562 |
| BmsI | GCATC | 1 cut(s) | 172 |
| BpiI | GAAGAC | 1 cut(s) | 32 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 140, 172 |
| Bpu10I | CCTNAGC | 1 cut(s) | 575 |
| BpuEI | CTTGAG | 1 cut(s) | 419 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 35, 65 |
| BseGI | GGATG | 2 cut(s) | 187, 319 |
| BseX3I | CGGCCG | 1 cut(s) | 285 |
| BseXI | GCAGC | 2 cut(s) | 154, 547 |
| Bsh1285I | CGRYCG | 1 cut(s) | 288 |
| BshFI | GGCC | 1 cut(s) | 287 |
| BsiEI | CGRYCG | 1 cut(s) | 288 |
| BsiHKAI | GWGCWC | 1 cut(s) | 598 |
| BsmI | GAATGC | 1 cut(s) | 210 |
| BsnI | GGCC | 1 cut(s) | 287 |
| Bsp1286I | GDGCHC | 1 cut(s) | 598 |
| Bsp143I | GATC | 1 cut(s) | 244 |
| BspACI | CCGC | 4 cut(s) | 224, 449, 455, 482 |
| BspANI | GGCC | 1 cut(s) | 287 |
| BssMI | GATC | 1 cut(s) | 244 |
| Bst4CI | ACNGT | 2 cut(s) | 58, 175 |
| BstC8I | GCNNGC | 2 cut(s) | 598, 602 |
| BstDEI | CTNAG | 1 cut(s) | 575 |
| BstF5I | GGATG | 2 cut(s) | 187, 319 |
| BstKTI | GATC | 1 cut(s) | 247 |
| BstMBI | GATC | 1 cut(s) | 244 |
| BstMCI | CGRYCG | 1 cut(s) | 288 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 214, 223, 455 |
| BstV1I | GCAGC | 2 cut(s) | 154, 547 |
| BstV2I | GAAGAC | 1 cut(s) | 32 |
| BstZI | CGGCCG | 1 cut(s) | 285 |
| BsuRI | GGCC | 1 cut(s) | 287 |
| BtsCI | GGATG | 2 cut(s) | 187, 319 |
| BtsIMutI | CAGTG | 1 cut(s) | 54 |
| Cac8I | GCNNGC | 2 cut(s) | 598, 602 |
| CseI | GACGC | 1 cut(s) | 206 |
| Csp6I | GTAC | 1 cut(s) | 342 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 43, 78 |
| CviAII | CATG | 2 cut(s) | 541, 627 |
| CviJI | RGCY | 7 cut(s) | 145, 287, 426, 499, 534, 596, 604 |
| CviKI_1 | RGCY | 7 cut(s) | 145, 287, 426, 499, 534, 596, 604 |
| CviQI | GTAC | 1 cut(s) | 342 |
| DdeI | CTNAG | 1 cut(s) | 575 |
| DpnI | GATC | 1 cut(s) | 246 |
| DpnII | GATC | 1 cut(s) | 244 |
| EaeI | YGGCCR | 1 cut(s) | 285 |
| EagI | CGGCCG | 1 cut(s) | 285 |
| EciI | GGCGGA | 2 cut(s) | 213, 464 |
| Ecl136II | GAGCTC | 1 cut(s) | 596 |
| EclXI | CGGCCG | 1 cut(s) | 285 |
| Eco24I | GRGCYC | 1 cut(s) | 598 |
| Eco52I | CGGCCG | 1 cut(s) | 285 |
| Eco53kI | GAGCTC | 1 cut(s) | 596 |
| Eco57I | CTGAAG | 1 cut(s) | 213 |
| EcoICRI | GAGCTC | 1 cut(s) | 596 |
| EcoT38I | GRGCYC | 1 cut(s) | 598 |
| FaeI | CATG | 2 cut(s) | 544, 630 |
| FaiI | YATR | 5 cut(s) | 32, 303, 542, 621, 628 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 369, 401 |
| FatI | CATG | 2 cut(s) | 540, 626 |
| Fnu4HI | GCNGC | 3 cut(s) | 143, 456, 561 |
| FokI | GGATG | 2 cut(s) | 194, 326 |
| FriOI | GRGCYC | 1 cut(s) | 598 |
| Fsp4HI | GCNGC | 3 cut(s) | 143, 456, 561 |
| FspBI | CTAG | 3 cut(s) | 137, 524, 611 |
| GluI | GCNGC | 3 cut(s) | 143, 456, 561 |
| HaeIII | GGCC | 1 cut(s) | 287 |
| HgaI | GACGC | 1 cut(s) | 206 |
| Hin1II | CATG | 2 cut(s) | 544, 630 |
| HphI | GGTGA | 2 cut(s) | 150, 400 |
| Hpy188I | TCNGA | 1 cut(s) | 18 |
| Hpy188III | TCNNGA | 3 cut(s) | 321, 386, 436 |
| HpyAV | CCTTC | 6 cut(s) | 101, 114, 237, 415, 479, 584 |
| HpyCH4III | ACNGT | 2 cut(s) | 58, 175 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 540 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 214, 223, 455 |
| HpyF3I | CTNAG | 1 cut(s) | 575 |
| Hsp92II | CATG | 2 cut(s) | 544, 630 |
| Kzo9I | GATC | 1 cut(s) | 244 |
| LmnI | GCTCC | 2 cut(s) | 9, 593 |
| LpnPI | CCDG | 4 cut(s) | 159, 345, 444, 513 |
| Lsp1109I | GCAGC | 2 cut(s) | 154, 547 |
| LweI | GCATC | 1 cut(s) | 172 |
| MaeI | CTAG | 3 cut(s) | 137, 524, 611 |
| MaeIII | GTNAC | 2 cut(s) | 508, 548 |
| MalI | GATC | 1 cut(s) | 246 |
| MboI | GATC | 1 cut(s) | 244 |
| MboII | GAAGA | 4 cut(s) | 32, 364, 422, 592 |
| MhlI | GDGCHC | 1 cut(s) | 598 |
| MluCI | AATT | 5 cut(s) | 269, 324, 368, 462, 490 |
| MnlI | CCTC | 5 cut(s) | 20, 172, 231, 445, 580 |
| Mva1269I | GAATGC | 1 cut(s) | 210 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 214, 223, 455 |
| NdeII | GATC | 1 cut(s) | 244 |
| NlaIII | CATG | 2 cut(s) | 544, 630 |
| PctI | GAATGC | 1 cut(s) | 210 |
| PkrI | GCNGC | 3 cut(s) | 144, 457, 562 |
| Psp124BI | GAGCTC | 1 cut(s) | 598 |
| RsaI | GTAC | 1 cut(s) | 343 |
| RsaNI | GTAC | 1 cut(s) | 342 |
| SacI | GAGCTC | 1 cut(s) | 598 |
| SatI | GCNGC | 3 cut(s) | 143, 456, 561 |
| Sau3AI | GATC | 1 cut(s) | 244 |
| SduI | GDGCHC | 1 cut(s) | 598 |
| SetI | ASST | 8 cut(s) | 31, 106, 334, 407, 490, 550, 598, 612 |
| SfaNI | GCATC | 1 cut(s) | 172 |
| SmlI | CTYRAG | 1 cut(s) | 434 |
| SmoI | CTYRAG | 1 cut(s) | 434 |
| SpeI | ACTAGT | 1 cut(s) | 523 |
| Sse9I | AATT | 5 cut(s) | 269, 324, 368, 462, 490 |
| SsiI | CCGC | 4 cut(s) | 224, 449, 455, 482 |
| SspI | AATATT | 1 cut(s) | 252 |
| SspMI | CTAG | 3 cut(s) | 137, 524, 611 |
| SstI | GAGCTC | 1 cut(s) | 598 |
| TaaI | ACNGT | 2 cut(s) | 58, 175 |
| TaqI | TCGA | 1 cut(s) | 243 |
| TasI | AATT | 5 cut(s) | 269, 324, 368, 462, 490 |
| TatI | WGTACW | 1 cut(s) | 341 |
| TauI | GCSGC | 1 cut(s) | 458 |
| TscAI | CASTG | 1 cut(s) | 61 |
| TseI | GCWGC | 2 cut(s) | 142, 560 |
| TspDTI | ATGAA | 2 cut(s) | 178, 557 |
| TspRI | CASTG | 1 cut(s) | 61 |
| XapI | RAATTY | 2 cut(s) | 368, 462 |
| XspI | CTAG | 3 cut(s) | 137, 524, 611 |