Pentatricopeptide repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Tetraspanin | PF00335 | 12 - 115 | 1e-10 | Tetraspanin family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 359 |
| AcoI | YGGCCR | 1 cut(s) | 75 |
| AfaI | GTAC | 4 cut(s) | 27, 89, 272, 453 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 343 |
| AflIII | ACRYGT | 1 cut(s) | 218 |
| AgsI | TTSAA | 3 cut(s) | 143, 305, 391 |
| AjnI | CCWGG | 1 cut(s) | 110 |
| AluBI | AGCT | 2 cut(s) | 21, 128 |
| AluI | AGCT | 2 cut(s) | 21, 128 |
| Alw26I | GTCTC | 1 cut(s) | 463 |
| AlwI | GGATC | 1 cut(s) | 359 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 245 |
| AoxI | GGCC | 2 cut(s) | 75, 190 |
| ApeKI | GCWGC | 2 cut(s) | 21, 236 |
| AsuHPI | GGTGA | 2 cut(s) | 58, 67 |
| BalI | TGGCCA | 1 cut(s) | 77 |
| BbvI | GCAGC | 2 cut(s) | 8, 223 |
| BccI | CCATC | 2 cut(s) | 4, 58 |
| BciT130I | CCWGG | 1 cut(s) | 112 |
| BclI | TGATCA | 2 cut(s) | 213, 382 |
| BcoDI | GTCTC | 1 cut(s) | 463 |
| BfaI | CTAG | 1 cut(s) | 559 |
| BfmI | CTRYAG | 1 cut(s) | 237 |
| BisI | GCNGC | 2 cut(s) | 22, 237 |
| BlsI | GCNGC | 2 cut(s) | 23, 238 |
| Bme1390I | CCNGG | 1 cut(s) | 112 |
| BmrFI | CCNGG | 1 cut(s) | 112 |
| BmrI | ACTGGG | 2 cut(s) | 352, 381 |
| BmuI | ACTGGG | 2 cut(s) | 352, 381 |
| BpmI | CTGGAG | 1 cut(s) | 330 |
| BsaI | GGTCTC | 1 cut(s) | 463 |
| BsaJI | CCNNGG | 3 cut(s) | 78, 167, 193 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 343 |
| Bse1I | ACTGG | 3 cut(s) | 313, 347, 376 |
| BseBI | CCWGG | 1 cut(s) | 112 |
| BseDI | CCNNGG | 3 cut(s) | 78, 167, 193 |
| BseGI | GGATG | 2 cut(s) | 15, 69 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BseNI | ACTGG | 3 cut(s) | 313, 347, 376 |
| BseRI | GAGGAG | 2 cut(s) | 31, 284 |
| BseXI | GCAGC | 2 cut(s) | 8, 223 |
| BshFI | GGCC | 2 cut(s) | 77, 192 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BsmAI | GTCTC | 1 cut(s) | 463 |
| BsnI | GGCC | 2 cut(s) | 77, 192 |
| Bso31I | GGTCTC | 1 cut(s) | 463 |
| Bsp1407I | TGTACA | 1 cut(s) | 270 |
| Bsp143I | GATC | 3 cut(s) | 213, 364, 382 |
| Bsp19I | CCATGG | 1 cut(s) | 78 |
| BspANI | GGCC | 2 cut(s) | 77, 192 |
| BspMAI | CTGCAG | 1 cut(s) | 241 |
| BspPI | GGATC | 1 cut(s) | 359 |
| BspTNI | GGTCTC | 1 cut(s) | 463 |
| BsrGI | TGTACA | 1 cut(s) | 270 |
| BsrI | ACTGG | 3 cut(s) | 313, 347, 376 |
| BssECI | CCNNGG | 3 cut(s) | 78, 167, 193 |
| BssMI | GATC | 3 cut(s) | 213, 364, 382 |
| BssT1I | CCWWGG | 3 cut(s) | 78, 167, 193 |
| Bst2UI | CCWGG | 1 cut(s) | 112 |
| Bst6I | CTCTTC | 1 cut(s) | 342 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 245 |
| BstAUI | TGTACA | 1 cut(s) | 270 |
| BstC8I | GCNNGC | 1 cut(s) | 75 |
| BstDSI | CCRYGG | 1 cut(s) | 78 |
| BstF5I | GGATG | 2 cut(s) | 15, 69 |
| BstKTI | GATC | 3 cut(s) | 216, 367, 385 |
| BstMAI | GTCTC | 1 cut(s) | 463 |
| BstMBI | GATC | 3 cut(s) | 213, 364, 382 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 245, 524 |
| BstNI | CCWGG | 1 cut(s) | 112 |
| BstNSI | RCATGY | 4 cut(s) | 222, 277, 439, 504 |
| BstSCI | CCNGG | 1 cut(s) | 110 |
| BstSFI | CTRYAG | 1 cut(s) | 237 |
| BstV1I | GCAGC | 2 cut(s) | 8, 223 |
| BsuRI | GGCC | 2 cut(s) | 77, 192 |
| BtgI | CCRYGG | 1 cut(s) | 78 |
| BtsCI | GGATG | 2 cut(s) | 15, 69 |
| BtsI | GCAGTG | 1 cut(s) | 243 |
| BtsIMutI | CAGTG | 1 cut(s) | 243 |
| Cac8I | GCNNGC | 1 cut(s) | 75 |
| CaiI | CAGNNNCTG | 1 cut(s) | 245 |
| Csp6I | GTAC | 4 cut(s) | 26, 88, 271, 452 |
| CviAII | CATG | 7 cut(s) | 79, 219, 274, 298, 338, 436, 501 |
| CviJI | RGCY | 6 cut(s) | 21, 73, 77, 110, 128, 192 |
| CviKI_1 | RGCY | 6 cut(s) | 21, 73, 77, 110, 128, 192 |
| CviQI | GTAC | 4 cut(s) | 26, 88, 271, 452 |
| DpnI | GATC | 3 cut(s) | 215, 366, 384 |
| DpnII | GATC | 3 cut(s) | 213, 364, 382 |
| DraI | TTTAAA | 1 cut(s) | 333 |
| EaeI | YGGCCR | 1 cut(s) | 75 |
| Eam1104I | CTCTTC | 1 cut(s) | 342 |
| EarI | CTCTTC | 1 cut(s) | 342 |
| Eco130I | CCWWGG | 3 cut(s) | 78, 167, 193 |
| Eco31I | GGTCTC | 1 cut(s) | 463 |
| EcoRII | CCWGG | 1 cut(s) | 110 |
| EcoT14I | CCWWGG | 3 cut(s) | 78, 167, 193 |
| ErhI | CCWWGG | 3 cut(s) | 78, 167, 193 |
| FaeI | CATG | 7 cut(s) | 82, 222, 277, 301, 341, 439, 504 |
| FatI | CATG | 7 cut(s) | 78, 218, 273, 297, 337, 435, 500 |
| FbaI | TGATCA | 2 cut(s) | 213, 382 |
| Fnu4HI | GCNGC | 2 cut(s) | 22, 237 |
| FokI | GGATG | 2 cut(s) | 22, 76 |
| Fsp4HI | GCNGC | 2 cut(s) | 22, 237 |
| FspBI | CTAG | 1 cut(s) | 559 |
| GluI | GCNGC | 2 cut(s) | 22, 237 |
| GsuI | CTGGAG | 1 cut(s) | 330 |
| HaeIII | GGCC | 2 cut(s) | 77, 192 |
| Hin1II | CATG | 7 cut(s) | 82, 222, 277, 301, 341, 439, 504 |
| HinfI | GANTC | 1 cut(s) | 146 |
| HphI | GGTGA | 2 cut(s) | 58, 67 |
| Hpy166II | GTNNAC | 1 cut(s) | 49 |
| Hpy188I | TCNGA | 1 cut(s) | 151 |
| Hpy188III | TCNNGA | 2 cut(s) | 225, 359 |
| Hpy8I | GTNNAC | 1 cut(s) | 49 |
| HpyCH4IV | ACGT | 1 cut(s) | 478 |
| HpyCH4V | TGCA | 4 cut(s) | 239, 248, 423, 500 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 245, 524 |
| HpySE526I | ACGT | 1 cut(s) | 478 |
| Hsp92II | CATG | 7 cut(s) | 82, 222, 277, 301, 341, 439, 504 |
| Ksp22I | TGATCA | 2 cut(s) | 213, 382 |
| Kzo9I | GATC | 3 cut(s) | 213, 364, 382 |
| LmnI | GCTCC | 1 cut(s) | 18 |
| Lsp1109I | GCAGC | 2 cut(s) | 8, 223 |
| MaeI | CTAG | 1 cut(s) | 559 |
| MaeII | ACGT | 1 cut(s) | 478 |
| MaeIII | GTNAC | 2 cut(s) | 199, 313 |
| MalI | GATC | 3 cut(s) | 215, 366, 384 |
| MboI | GATC | 3 cut(s) | 213, 364, 382 |
| MboII | GAAGA | 2 cut(s) | 155, 359 |
| MlsI | TGGCCA | 1 cut(s) | 77 |
| MluCI | AATT | 2 cut(s) | 33, 386 |
| MluNI | TGGCCA | 1 cut(s) | 77 |
| MmeI | TCCRAC | 2 cut(s) | 182, 392 |
| MnlI | CCTC | 3 cut(s) | 9, 305, 343 |
| Mox20I | TGGCCA | 1 cut(s) | 77 |
| MscI | TGGCCA | 1 cut(s) | 77 |
| MseI | TTAA | 1 cut(s) | 332 |
| MslI | CAYNNNNRTG | 1 cut(s) | 505 |
| Msp20I | TGGCCA | 1 cut(s) | 77 |
| MspR9I | CCNGG | 1 cut(s) | 112 |
| MvaI | CCWGG | 1 cut(s) | 112 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 245, 524 |
| NcoI | CCATGG | 1 cut(s) | 78 |
| NdeII | GATC | 3 cut(s) | 213, 364, 382 |
| NlaIII | CATG | 7 cut(s) | 82, 222, 277, 301, 341, 439, 504 |
| NmuCI | GTSAC | 1 cut(s) | 313 |
| NspI | RCATGY | 4 cut(s) | 222, 277, 439, 504 |
| PciI | ACATGT | 1 cut(s) | 218 |
| PfeI | GAWTC | 1 cut(s) | 146 |
| PkrI | GCNGC | 2 cut(s) | 23, 238 |
| PscI | ACATGT | 1 cut(s) | 218 |
| Psp6I | CCWGG | 1 cut(s) | 110 |
| PspGI | CCWGG | 1 cut(s) | 110 |
| PstI | CTGCAG | 1 cut(s) | 241 |
| PstNI | CAGNNNCTG | 1 cut(s) | 245 |
| RsaI | GTAC | 4 cut(s) | 27, 89, 272, 453 |
| RsaNI | GTAC | 4 cut(s) | 26, 88, 271, 452 |
| RseI | CAYNNNNRTG | 1 cut(s) | 505 |
| SaqAI | TTAA | 1 cut(s) | 332 |
| SatI | GCNGC | 2 cut(s) | 22, 237 |
| Sau3AI | GATC | 3 cut(s) | 213, 364, 382 |
| ScrFI | CCNGG | 1 cut(s) | 112 |
| SetI | ASST | 6 cut(s) | 23, 130, 169, 407, 459, 481 |
| SfcI | CTRYAG | 1 cut(s) | 237 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 505 |
| Sse9I | AATT | 2 cut(s) | 33, 386 |
| SspMI | CTAG | 1 cut(s) | 559 |
| StyD4I | CCNGG | 1 cut(s) | 110 |
| StyI | CCWWGG | 3 cut(s) | 78, 167, 193 |
| TaiI | ACGT | 1 cut(s) | 481 |
| TasI | AATT | 2 cut(s) | 33, 386 |
| TatI | WGTACW | 2 cut(s) | 87, 270 |
| TfiI | GAWTC | 1 cut(s) | 146 |
| Tru1I | TTAA | 1 cut(s) | 332 |
| Tru9I | TTAA | 1 cut(s) | 332 |
| TscAI | CASTG | 1 cut(s) | 250 |
| TseFI | GTSAC | 1 cut(s) | 313 |
| TseI | GCWGC | 2 cut(s) | 21, 236 |
| Tsp45I | GTSAC | 1 cut(s) | 313 |
| TspDTI | ATGAA | 1 cut(s) | 163 |
| TspRI | CASTG | 1 cut(s) | 250 |
| XceI | RCATGY | 4 cut(s) | 222, 277, 439, 504 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 165 |
| XspI | CTAG | 1 cut(s) | 559 |